>NRK2_MOUSE (Q9D7C9) Nicotinamide riboside kinase 2 (EC 2.7.1.-) (Integrin|
           beta-1-binding protein 3) (Muscle integrin-binding
           protein) (MIBP)
          Length = 195

 Score =  103 bits (258), Expect = 1e-22
 Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = +1

Query: 172 LTNKLINSLPNCCVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPA 348
           LTN L+ +LPNCCV+HQDDFFKPQD+I V EDGFKQ+DV+ +LDME M+ST+  W KDP 
Sbjct: 18  LTNSLLKALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDMETMLSTVQAWVKDPH 77

Query: 349 KXERSHGIN 375
           K  R+HG++
Sbjct: 78  KFARAHGVS 86

>NRK2_HUMAN (Q9NPI5) Nicotinamide riboside kinase 2 (EC 2.7.1.-) (Integrin|
           beta-1-binding protein 3) (Muscle integrin-binding
           protein) (MIBP)
          Length = 230

 Score =  100 bits (248), Expect = 2e-21
 Identities = 43/69 (62%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = +1

Query: 172 LTNKLINSLPNCCVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDPA 348
           LTN L+ +LPNCCV+HQDDFFKPQD+I V EDGFKQ+DV+ +LDMEAM+ T+  W   P 
Sbjct: 18  LTNSLLRALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDMEAMLDTVQAWLSSPQ 77

Query: 349 KXERSHGIN 375
           K  R+HG++
Sbjct: 78  KFARAHGVS 86

>NRK1_RAT (Q6AY91) Nicotinamide riboside kinase 1 (EC 2.7.1.-)|
          Length = 195

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = +1

Query: 172 LTNKLINSLPNCCVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDP 345
           L   L   LPNC V+ QDDFFKP+ +I++ E+GF QYDV+ AL+ME MMS +  W ++P
Sbjct: 19  LAKNLQKRLPNCSVISQDDFFKPESEIDIDENGFLQYDVLEALNMEKMMSAVSCWMENP 77

>NRK1_MOUSE (Q91W63) Nicotinamide riboside kinase 1 (EC 2.7.1.-)|
          Length = 195

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = +1

Query: 172 LTNKLINSLPNCCVVHQDDFFKPQDKIEV-EDGFKQYDVITALDMEAMMSTIDGWQKDP 345
           L   L   LPNC V+ QDDFFKP+ +I++ E+GF QYDV+ AL+ME MMS +  W ++P
Sbjct: 19  LAKSLQKHLPNCSVISQDDFFKPESEIDIDENGFLQYDVLEALNMEKMMSAVSCWMENP 77

>NRK1_HUMAN (Q9NWW6) Nicotinamide riboside kinase 1 (EC 2.7.1.-)|
          Length = 199

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = +1

Query: 172 LTNKLINSLPNCCVVHQDDFFKPQDKIEVE-DGFKQYDVITALDMEAMMSTIDGWQK 339
           L   L   LPNC V+ QDDFFKP+ +IE + +GF QYDV+ AL+ME MMS I  W +
Sbjct: 19  LAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAISCWME 75

>NRK1_SCHPO (Q9C0W1) Probable nicotinamide riboside kinase 1 (EC 2.7.1.-)|
          Length = 230

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +1

Query: 211 VVHQDDFFKPQDKIEVEDGFKQYDVITALDMEAMMSTI 324
           +VH+DDF+K   +I V++G   +D   +L+++A +  +
Sbjct: 34  LVHEDDFYKTDAEIPVKNGIADWDCQESLNLDAFLENL 71

>NRK1_ASHGO (P62511) Nicotinamide riboside kinase 1 (EC 2.7.1.-)|
          Length = 241

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 187 INSLPNCCVVHQDDFFKPQDKIEVEDGFK--QYDVITALDMEAMMSTID 327
           +  L +  +VHQDDF++  D++  ++ ++   +DV  ALDM      +D
Sbjct: 35  VQVLEDAVLVHQDDFYRHDDEVPFDEEYQIGNWDVPEALDMAQFERELD 83

>YRR6_CAEEL (Q10000) Hypothetical protein R144.6|
          Length = 345

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -1

Query: 356 SXLAGSFCQPSIVLI---IASISNAVITSYCLNPSSTSILSWGLKKSSW 219
           S   G FC  S ++I   I S +N   +S  + PS T+   WG+ ++SW
Sbjct: 235 SHYIGIFCTASALMIGYVIYSRNNPFASSRLVGPSMTAGSMWGIAQASW 283

>HEMK_RICFE (Q4UJU4) Bifunctional methyltransferase [Includes: HemK protein|
           homolog (EC 2.1.1.-); tRNA
           (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)
           (tRNA(m7G46)-methyltransferase)]
          Length = 527

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 20/86 (23%)
 Frame = +1

Query: 229 FFKPQDKIEVEDGFKQYDVITAL------DMEAMMSTIDGWQK----DPAKXERSHG--- 369
           F KP  KI +E GFKQ + +T +      ++E++   + G  +     P    RS+    
Sbjct: 261 FLKPNGKIVLEIGFKQEEAVTQIFLSNGYNIESVYKDLQGHSRVILFSPINLNRSYARRI 320

Query: 370 -------INNELDSEAPQDAEKRESL 426
                    N LD+E P+    +E L
Sbjct: 321 GKSLSGLQQNLLDNELPKYLFSKEKL 346

>SSB_PSESM (Q889U1) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 189

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 259 EDGFKQYDVITALDMEAMMSTIDGWQKDPAKXERSHGINNELDSEAPQDAEKRES 423
           +DG K+Y     +DM+  M  + G  +  A+  +  G N    +  PQ +  ++S
Sbjct: 90  KDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQQGQGGGGNYNQSAPRPQQSRPQQS 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,421,624
Number of Sequences: 219361
Number of extensions: 916650
Number of successful extensions: 2111
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)