ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd1a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
2gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
3gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
6gb|BT013819.1| Lycopersicon esculentum clone 132741F, mRNA sequence 48 0.029
7gb|AF414218.1| Gadus morhua clone UB1-36e MHC class Ia antigen m... 44 0.45
8gb|AF414209.1| Gadus morhua clone UD-31b MHC class Ia antigen-li... 44 0.45
9gb|AF414205.1| Gadus morhua clone UF-6 MHC class Ia antigen mRNA... 44 0.45
10gb|AF414203.1| Gadus morhua clone UF-8 MHC class Ia antigen mRNA... 44 0.45
11emb|AJ132511.1|GMO132511 Gadus morhua mRNA for MHC class I, clon... 44 0.45
12gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosom... 40 7.0
13gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosom... 40 7.0
14emb|AL365195.17| Human DNA sequence from clone RP11-451E16 on ch... 40 7.0
15emb|AL121573.15|HSDJ306F2 Human DNA sequence from clone RP1-306F... 40 7.0
16emb|AL121978.5|HSJ520B18 Human DNA sequence from clone RP3-520B1... 40 7.0
17emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 7.0
18emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid co... 40 7.0
19emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid co... 40 7.0
20emb|CR339043.11| Zebrafish DNA sequence from clone CH211-154I8 i... 40 7.0
21gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswel... 40 7.0
22gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, co... 40 7.0
23gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, co... 40 7.0
24gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell ... 40 7.0
25gb|AY939858.1| Cyprinid herpesvirus 1 DNA helicase gene, complet... 40 7.0
26gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complet... 40 7.0
27dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.0
28gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, compl... 40 7.0
29gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 ... 40 7.0
30gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosom... 40 7.0
31gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, comple... 40 7.0
32gb|AC171110.2| Mus musculus BAC clone RP24-503L4 from chromosome... 40 7.0 
>dbj|AK072007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098F24, full
           insert sequence
          Length = 1819

 Score =  408 bits (206), Expect = e-111
 Identities = 444/522 (85%), Gaps = 1/522 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttgcagctcagtatggccaa-caacattcttgcatcacatcgtctccaagtatggtgc 59
           |||||||||||||||||| ||| || |||||||||| |||||  |||| ||||| |||||
Sbjct: 218 tgttgcagctcagtatggacaaacagcattcttgcaccacattatctcaaagtacggtgc 277

                                                                       
Query: 60  ggactttgaagctttggacaatgacgggaggagctctttgcactgggctgcctacaaggg 119
            | ||||||   |||||||||||| ||||||||  | |||||||||||||||||||| ||
Sbjct: 278 agtctttgagtgtttggacaatgatgggaggagtccattgcactgggctgcctacaaagg 337

                                                                       
Query: 120 aaatgcagatacaattaggttactactgtttatggatgctaatcaagtaaggcaggacaa 179
           |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 338 aaatgctgatacaattaggttactgctgtttatggatgctaatcaagtaaggcaagacaa 397

                                                                       
Query: 180 aaatggttgcactcccttacactgggctgctataagaggaagtttagaagtttgcaccct 239
           ||||||||| ||||| ||||||||||| || |||||||||| ||  || || |||||  |
Sbjct: 398 aaatggttgtactccattacactgggcagcaataagaggaaattatgaggtgtgcactgt 457

                                                                       
Query: 240 tcttgtacatgcaggcaccaagcaggaactaacattgagggatagcggtgggtttactcc 299
           |||||||||||| || |||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 458 tcttgtacatgctggtaccaaggaggaactcacattgaaggatagcggtgggtttactcc 517

                                                                       
Query: 300 ttcgcaacttgcagcagacaaaggtcaacggcatctttccaatatactttctaatgctac 359
           |  | ||||||||   ||||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct: 518 tgtggaacttgcaaacgacaaaggtcatcggcatctttcctatatcctttccaatgctac 577

                                                                       
Query: 360 aaaagtaagctttggagacaagtactgctcagggaggctgggcaaggttggatacgcacc 419
           ||||||||  |||| |||||||||||||||||||||   | | ||| ||||||| ||  |
Sbjct: 578 aaaagtaacatttgaagacaagtactgctcagggagatcgcggaagattggatatgcttc 637

                                                                       
Query: 420 tatcctgtttacttatcttgttatcctcgtgatccttttcctgaaatcaattgtttttgc 479
           ||||||||||   | |||| || ||||  | | |||||| ||||| |||||| |||||||
Sbjct: 638 tatcctgttttgctttcttattgtccttatcaccctttttctgaactcaattatttttgc 697

                                                     
Query: 480 atctgatttttctagaatcactgctgctgttggtctttggtc 521
           | |  ||||||||||||| ||||| ||||||||| |||||||
Sbjct: 698 accgaatttttctagaataactgccgctgttggtatttggtc 739
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>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24,
              complete sequence
          Length = 152738

 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Plus

                                                                          
Query: 104    gggctgcctacaagggaaatgcagatacaattaggttactactgtttatggatgctaatc 163
              ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 105944 gggctgcctacaaaggaaatgctgatacaattaggttactgctgtttatggatgctaatc 106003

                                     
Query: 164    aagtaaggcaggacaaaaatggt 186
              |||||||||| ||||||||||||
Sbjct: 106004 aagtaaggcaagacaaaaatggt 106026



 Score =  129 bits (65), Expect = 1e-26
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                          
Query: 184    ggttgcactcccttacactgggctgctataagaggaagtttagaagtttgcacccttctt 243
              ||||| ||||| ||||||||||| || |||||||||| ||  || || |||||  |||||
Sbjct: 106531 ggttgtactccattacactgggcagcaataagaggaaattatgaggtgtgcactgttctt 106590

                                                                          
Query: 244    gtacatgcaggcaccaagcaggaactaacattgagggatagcggtgggtttactccttcg 303
              |||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||||  |
Sbjct: 106591 gtacatgctggtaccaaggaggaactcacattgaaggatagcggtgggtttactcctgtg 106650

                                                       
Query: 304    caacttgcagcagacaaaggtcaacggcatctttccaatat 344
               ||||||||   ||||||||||| |||||||||||| ||||
Sbjct: 106651 gaacttgcaaacgacaaaggtcatcggcatctttcctatat 106691



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/106 (84%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgttgcagctcagtatggccaa-caacattcttgcatcacatcgtctccaagtatggtgc 59
              |||||||||||||||||| ||| || |||||||||| |||||  |||| ||||| |||||
Sbjct: 105178 tgttgcagctcagtatggacaaacagcattcttgcaccacattatctcaaagtacggtgc 105237

                                                            
Query: 60     ggactttgaagctttggacaatgacgggaggagctctttgcactgg 105
               ||||||||   |||||||||||| ||||||||  | |||||||||
Sbjct: 105238 agactttgagtgtttggacaatgatgggaggagtccattgcactgg 105283



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 352    aatgctacaaaagtaagctttggagacaagtactgctcagggag 395
              ||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 106909 aatgctacaaaagtaacatttgaagacaagtactgctcagggag 106952



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 485    atttttctagaatcactgctgctgttggtctttggtc 521
              ||||||||||||| ||||| ||||||||| |||||||
Sbjct: 107136 atttttctagaataactgccgctgttggtatttggtc 107172
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>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0041I05, complete sequence
          Length = 148785

 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Plus

                                                                        
Query: 104  gggctgcctacaagggaaatgcagatacaattaggttactactgtttatggatgctaatc 163
            ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 3120 gggctgcctacaaaggaaatgctgatacaattaggttactgctgtttatggatgctaatc 3179

                                   
Query: 164  aagtaaggcaggacaaaaatggt 186
            |||||||||| ||||||||||||
Sbjct: 3180 aagtaaggcaagacaaaaatggt 3202



 Score =  129 bits (65), Expect = 1e-26
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                        
Query: 184  ggttgcactcccttacactgggctgctataagaggaagtttagaagtttgcacccttctt 243
            ||||| ||||| ||||||||||| || |||||||||| ||  || || |||||  |||||
Sbjct: 3707 ggttgtactccattacactgggcagcaataagaggaaattatgaggtgtgcactgttctt 3766

                                                                        
Query: 244  gtacatgcaggcaccaagcaggaactaacattgagggatagcggtgggtttactccttcg 303
            |||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||||  |
Sbjct: 3767 gtacatgctggtaccaaggaggaactcacattgaaggatagcggtgggtttactcctgtg 3826

                                                     
Query: 304  caacttgcagcagacaaaggtcaacggcatctttccaatat 344
             ||||||||   ||||||||||| |||||||||||| ||||
Sbjct: 3827 gaacttgcaaacgacaaaggtcatcggcatctttcctatat 3867



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/106 (84%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgttgcagctcagtatggccaa-caacattcttgcatcacatcgtctccaagtatggtgc 59
            |||||||||||||||||| ||| || |||||||||| |||||  |||| ||||| |||||
Sbjct: 2354 tgttgcagctcagtatggacaaacagcattcttgcaccacattatctcaaagtacggtgc 2413

                                                          
Query: 60   ggactttgaagctttggacaatgacgggaggagctctttgcactgg 105
             ||||||||   |||||||||||| ||||||||  | |||||||||
Sbjct: 2414 agactttgagtgtttggacaatgatgggaggagtccattgcactgg 2459



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 352  aatgctacaaaagtaagctttggagacaagtactgctcagggag 395
            ||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 4085 aatgctacaaaagtaacatttgaagacaagtactgctcagggag 4128



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 485  atttttctagaatcactgctgctgttggtctttggtc 521
            ||||||||||||| ||||| ||||||||| |||||||
Sbjct: 4312 atttttctagaataactgccgctgttggtatttggtc 4348
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Plus

                                                                            
Query: 104      gggctgcctacaagggaaatgcagatacaattaggttactactgtttatggatgctaatc 163
                ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 19597969 gggctgcctacaaaggaaatgctgatacaattaggttactgctgtttatggatgctaatc 19598028

                                       
Query: 164      aagtaaggcaggacaaaaatggt 186
                |||||||||| ||||||||||||
Sbjct: 19598029 aagtaaggcaagacaaaaatggt 19598051



 Score =  129 bits (65), Expect = 1e-26
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                            
Query: 184      ggttgcactcccttacactgggctgctataagaggaagtttagaagtttgcacccttctt 243
                ||||| ||||| ||||||||||| || |||||||||| ||  || || |||||  |||||
Sbjct: 19598556 ggttgtactccattacactgggcagcaataagaggaaattatgaggtgtgcactgttctt 19598615

                                                                            
Query: 244      gtacatgcaggcaccaagcaggaactaacattgagggatagcggtgggtttactccttcg 303
                |||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||||  |
Sbjct: 19598616 gtacatgctggtaccaaggaggaactcacattgaaggatagcggtgggtttactcctgtg 19598675

                                                         
Query: 304      caacttgcagcagacaaaggtcaacggcatctttccaatat 344
                 ||||||||   ||||||||||| |||||||||||| ||||
Sbjct: 19598676 gaacttgcaaacgacaaaggtcatcggcatctttcctatat 19598716



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/106 (84%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgttgcagctcagtatggccaa-caacattcttgcatcacatcgtctccaagtatggtgc 59
                |||||||||||||||||| ||| || |||||||||| |||||  |||| ||||| |||||
Sbjct: 19597203 tgttgcagctcagtatggacaaacagcattcttgcaccacattatctcaaagtacggtgc 19597262

                                                              
Query: 60       ggactttgaagctttggacaatgacgggaggagctctttgcactgg 105
                 ||||||||   |||||||||||| ||||||||  | |||||||||
Sbjct: 19597263 agactttgagtgtttggacaatgatgggaggagtccattgcactgg 19597308



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 352      aatgctacaaaagtaagctttggagacaagtactgctcagggag 395
                ||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 19598934 aatgctacaaaagtaacatttgaagacaagtactgctcagggag 19598977



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 485      atttttctagaatcactgctgctgttggtctttggtc 521
                ||||||||||||| ||||| ||||||||| |||||||
Sbjct: 19599161 atttttctagaataactgccgctgttggtatttggtc 19599197
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 6e-28
 Identities = 79/83 (95%)
 Strand = Plus / Plus

                                                                            
Query: 104      gggctgcctacaagggaaatgcagatacaattaggttactactgtttatggatgctaatc 163
                ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 19883483 gggctgcctacaaaggaaatgctgatacaattaggttactgctgtttatggatgctaatc 19883542

                                       
Query: 164      aagtaaggcaggacaaaaatggt 186
                |||||||||| ||||||||||||
Sbjct: 19883543 aagtaaggcaagacaaaaatggt 19883565



 Score =  129 bits (65), Expect = 1e-26
 Identities = 137/161 (85%)
 Strand = Plus / Plus

                                                                            
Query: 184      ggttgcactcccttacactgggctgctataagaggaagtttagaagtttgcacccttctt 243
                ||||| ||||| ||||||||||| || |||||||||| ||  || || |||||  |||||
Sbjct: 19884070 ggttgtactccattacactgggcagcaataagaggaaattatgaggtgtgcactgttctt 19884129

                                                                            
Query: 244      gtacatgcaggcaccaagcaggaactaacattgagggatagcggtgggtttactccttcg 303
                |||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||||  |
Sbjct: 19884130 gtacatgctggtaccaaggaggaactcacattgaaggatagcggtgggtttactcctgtg 19884189

                                                         
Query: 304      caacttgcagcagacaaaggtcaacggcatctttccaatat 344
                 ||||||||   ||||||||||| |||||||||||| ||||
Sbjct: 19884190 gaacttgcaaacgacaaaggtcatcggcatctttcctatat 19884230



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 90/106 (84%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgttgcagctcagtatggccaa-caacattcttgcatcacatcgtctccaagtatggtgc 59
                |||||||||||||||||| ||| || |||||||||| |||||  |||| ||||| |||||
Sbjct: 19882717 tgttgcagctcagtatggacaaacagcattcttgcaccacattatctcaaagtacggtgc 19882776

                                                              
Query: 60       ggactttgaagctttggacaatgacgggaggagctctttgcactgg 105
                 ||||||||   |||||||||||| ||||||||  | |||||||||
Sbjct: 19882777 agactttgagtgtttggacaatgatgggaggagtccattgcactgg 19882822



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 352      aatgctacaaaagtaagctttggagacaagtactgctcagggag 395
                ||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 19884448 aatgctacaaaagtaacatttgaagacaagtactgctcagggag 19884491



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 485      atttttctagaatcactgctgctgttggtctttggtc 521
                ||||||||||||| ||||| ||||||||| |||||||
Sbjct: 19884675 atttttctagaataactgccgctgttggtatttggtc 19884711
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>gb|BT013819.1| Lycopersicon esculentum clone 132741F, mRNA sequence
          Length = 2049

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 76  gacaatgacgggaggagctctttgcactgggctgcctacaaggg 119
           |||| ||||||||| ||| |||| ||||||||||| ||||||||
Sbjct: 514 gacagtgacgggagaagccctttacactgggctgcatacaaggg 557
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>gb|AF414218.1| Gadus morhua clone UB1-36e MHC class Ia antigen mRNA, partial cds
          Length = 1615

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 500 ctgctgctgttggtctttggtc 521
           ||||||||||||||||||||||
Sbjct: 9   ctgctgctgttggtctttggtc 30
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>gb|AF414209.1| Gadus morhua clone UD-31b MHC class Ia antigen-like mRNA, partial
           sequence
          Length = 1761

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 500 ctgctgctgttggtctttggtc 521
           ||||||||||||||||||||||
Sbjct: 44  ctgctgctgttggtctttggtc 65
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>gb|AF414205.1| Gadus morhua clone UF-6 MHC class Ia antigen mRNA, complete cds
          Length = 1772

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 500 ctgctgctgttggtctttggtc 521
           ||||||||||||||||||||||
Sbjct: 82  ctgctgctgttggtctttggtc 103
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>gb|AF414203.1| Gadus morhua clone UF-8 MHC class Ia antigen mRNA, complete cds
          Length = 1760

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 500 ctgctgctgttggtctttggtc 521
           ||||||||||||||||||||||
Sbjct: 82  ctgctgctgttggtctttggtc 103
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>emb|AJ132511.1|GMO132511 Gadus morhua mRNA for MHC class I, clone c28
          Length = 1687

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 500 ctgctgctgttggtctttggtc 521
           ||||||||||||||||||||||
Sbjct: 40  ctgctgctgttggtctttggtc 61
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>gb|AC122376.4| Mus musculus BAC clone RP23-472G10 from chromosome 7, complete sequence
          Length = 183918

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    ggagacaagtactgctcagg 392
              ||||||||||||||||||||
Sbjct: 111420 ggagacaagtactgctcagg 111439
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>gb|AC163650.2| Mus musculus BAC clone RP24-383A20 from chromosome 13, complete sequence
          Length = 210177

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 487    ttttctagaatcactgctgctgtt 510
              ||||||| ||||||||||||||||
Sbjct: 138338 ttttctaaaatcactgctgctgtt 138315
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>emb|AL365195.17| Human DNA sequence from clone RP11-451E16 on chromosome 9, complete
             sequence
          Length = 88920

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   atctgatttttctagaatca 499
             ||||||||||||||||||||
Sbjct: 40361 atctgatttttctagaatca 40342
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>emb|AL121573.15|HSDJ306F2 Human DNA sequence from clone RP1-306F2 on chromosome 6p12.1-21.1
             Contains RBMXP1 for RNA binding motif protein (X
             chromosome) pseudogene 1, complete sequence
          Length = 67061

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   ctacaaaagtaagctttgga 375
             ||||||||||||||||||||
Sbjct: 57173 ctacaaaagtaagctttgga 57192
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>emb|AL121978.5|HSJ520B18 Human DNA sequence from clone RP3-520B18 on chromosome 6p24.1-25.3
             Contains the 5' end of the gene for phenylalanine-tRNA
             synthetase (FARS1), a microtubule-associated protein 1A/1B
             light chain 3 pseudogene and a CpG island, complete
             sequence
          Length = 148385

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   aatatactttctaatgctac 359
             ||||||||||||||||||||
Sbjct: 62999 aatatactttctaatgctac 63018
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 463     aaatcaattgtttttgcatc 482
               ||||||||||||||||||||
Sbjct: 1276999 aaatcaattgtttttgcatc 1277018
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>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8
          Length = 197698

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   acattcttgcatcacatcgt 44
            ||||||||||||||||||||
Sbjct: 1750 acattcttgcatcacatcgt 1769
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>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4
          Length = 177225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     acattcttgcatcacatcgt 44
              ||||||||||||||||||||
Sbjct: 175074 acattcttgcatcacatcgt 175093
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>emb|CR339043.11| Zebrafish DNA sequence from clone CH211-154I8 in linkage group 16,
              complete sequence
          Length = 173553

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    caccaagcaggaactaacat 274
              ||||||||||||||||||||
Sbjct: 137746 caccaagcaggaactaacat 137727
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>gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 192588

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    ctgctgctgttggtctttgg 519
              ||||||||||||||||||||
Sbjct: 103796 ctgctgctgttggtctttgg 103777
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>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence
          Length = 227506

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   acaaaagtaagctttggaga 377
             ||||||||||||||||||||
Sbjct: 88089 acaaaagtaagctttggaga 88108
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>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence
          Length = 203493

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   acaaaagtaagctttggaga 377
             ||||||||||||||||||||
Sbjct: 55354 acaaaagtaagctttggaga 55335
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>gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168047

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    ctgctgctgttggtctttgg 519
              ||||||||||||||||||||
Sbjct: 143146 ctgctgctgttggtctttgg 143127
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>gb|AY939858.1| Cyprinid herpesvirus 1 DNA helicase gene, complete cds
          Length = 1452

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 500 ctgctgctgttggtctttgg 519
           ||||||||||||||||||||
Sbjct: 401 ctgctgctgttggtctttgg 382
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>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence
          Length = 193015

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  aaaagtaagctttggagaca 379
            ||||||||||||||||||||
Sbjct: 3147 aaaagtaagctttggagaca 3166
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     ccttcgcaacttgcagcaga 317
               ||||||||||||||||||||
Sbjct: 4792484 ccttcgcaacttgcagcaga 4792503
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>gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 466    tcaattgtttttgcatctga 485
              ||||||||||||||||||||
Sbjct: 111363 tcaattgtttttgcatctga 111382
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>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete
              sequence
          Length = 286515

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    ctgctgctgttggtctttgg 519
              ||||||||||||||||||||
Sbjct: 129825 ctgctgctgttggtctttgg 129806
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>gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosome unknown, complete
             sequence
          Length = 196590

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   gaaatcaattgtttttgcat 481
             ||||||||||||||||||||
Sbjct: 49006 gaaatcaattgtttttgcat 48987
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>gb|AC152167.3| Mus musculus BAC clone RP23-330B16 from 7, complete sequence
          Length = 215518

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   ggagacaagtactgctcagg 392
             ||||||||||||||||||||
Sbjct: 44213 ggagacaagtactgctcagg 44194
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>gb|AC171110.2| Mus musculus BAC clone RP24-503L4 from chromosome 3, complete sequence
          Length = 207203

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   ttgtttttgcatctgatttt 489
             ||||||||||||||||||||
Sbjct: 44802 ttgtttttgcatctgatttt 44821


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,993,678
Number of Sequences: 3902068
Number of extensions: 4993678
Number of successful extensions: 94088
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93933
Number of HSP's gapped (non-prelim): 150
length of query: 521
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 498
effective length of database: 17,143,297,704
effective search space: 8537362256592
effective search space used: 8537362256592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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