ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd0h12 |
|---|---|
| Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 407 bits (1047), Expect = e-114 Identities = 185/185 (100%), Positives = 185/185 (100%) Frame = +1 Query: 1 MVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGD 180 MVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGD Sbjct: 119 MVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGD 178 Query: 181 SEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRES 360 SEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRES Sbjct: 179 SEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRES 238 Query: 361 LQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLS 540 LQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLS Sbjct: 239 LQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLS 298 Query: 541 SYTTA 555 SYTTA Sbjct: 299 SYTTA 303
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 63.9 bits (154), Expect = 3e-10 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 3/144 (2%) Frame = +1 Query: 10 SGNHERDW-PNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSE 186 +GNHE + P G K VP Y +++ + FWY + V S Sbjct: 226 AGNHENHFAPEIGETVPFKPYTHRYHVP-----YKASQSTSPFWYSIKRASAHIIVLASY 280 Query: 187 HDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQG-SFEEPEGRESL 363 + + TPQYK++E+ L V+R PWLI H + WY + E E + Sbjct: 281 SAYGKYTPQYKWLEKELPKVNRTETPWLIVLMH-------SPWYNSYNYHYMEGETMRVM 333 Query: 364 QKLW-QRYRVDIAYFGHVHNYERT 432 + W +Y+VD+ + GHVH YER+ Sbjct: 334 YEPWFVQYKVDVVFAGHVHAYERS 357
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 63.2 bits (152), Expect = 5e-10 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 2/143 (1%) Frame = +1 Query: 10 SGNHERDW-PNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSE 186 +GNHE ++ P K VP Y +++ + FWY + V S Sbjct: 199 AGNHEIEFAPEINETEPFKPFSYRYHVP-----YEASQSTSPFWYSIKRASAHIIVLSSH 253 Query: 187 HDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQ 366 + GTPQY ++++ L V R PWLI H L S N F E E + Sbjct: 254 IAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNH------HFMEGEAMRTKF 307 Query: 367 KLW-QRYRVDIAYFGHVHNYERT 432 + W +Y+VD+ + GHVH YER+ Sbjct: 308 EAWFVKYKVDVVFAGHVHAYERS 330
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 56.6 bits (135), Expect = 5e-08 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Frame = +1 Query: 10 SGNHERDW-PNTGGFFDVKDSGGECGVPAETMYYYPAENRANF---WYKVDYGMFRFCVG 177 +GNHE D+ P+ G K P Y+ P + + WY + V Sbjct: 232 AGNHEIDFVPDIGEIEPFK--------PFMNRYHTPHKASGSISPLWYSIKRASAYIIVM 283 Query: 178 DSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRE 357 + TPQYK++E+ L V+R PWLI H YSS + +G R Sbjct: 284 SCYSSYGIYTPQYKWLEKELQGVNRTETPWLIVLVHSPF-YSSYVHHYMEGE----TLRV 338 Query: 358 SLQKLWQRYRVDIAYFGHVHNYERT 432 ++ + +Y+VD+ + GHVH YER+ Sbjct: 339 MYEQWFVKYKVDVVFAGHVHAYERS 363
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 54.7 bits (130), Expect = 2e-07 Identities = 57/250 (22%), Positives = 86/250 (34%), Gaps = 73/250 (29%) Frame = +1 Query: 1 MVASGNHERDWPNTGGFFDV-----KDSGGECGVPAETMYYY--PAENR----------- 126 MV GNHE G ++ D P + + YY P R Sbjct: 303 MVLPGNHEASCAEFDGPHNILTAYLNDDIANGTAPTDNLTYYSCPPSQRNFTAYQHRFRM 362 Query: 127 --------ANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEEC---------------- 234 NFWY DYG+ F D E D+ +P++ F E+ Sbjct: 363 PGPETGGVGNFWYSFDYGLAHFVSIDGETDFAN-SPEWNFAEDVTGNETLPSESETFITD 421 Query: 235 --------------------------LSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSF 336 L+ VDR PW+I +HR + S+ S Y Sbjct: 422 SGPFGNVNGSVHETKSYEQWHWLQQDLAKVDRSKTPWVIVMSHRPMYSSAYSSY------ 475 Query: 337 EEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGT 501 + RE+ + L +Y VD GH+H YER PL + ++ + T+Y+ Sbjct: 476 -QLHVREAFEGLLLKYGVDAYLSGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSI 534 Query: 502 IFVVAGGGGS 531 ++ G G+ Sbjct: 535 THIINGMAGN 544
>Y2577_MYCTU (Q50644) Hypothetical protein Rv2577/MT2654| Length = 529 Score = 44.3 bits (103), Expect = 2e-04 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 25/202 (12%) Frame = +1 Query: 1 MVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRAN-----FWYKVDYGMFR 165 M A+GNHE + N G G A Y+ ++ ++ WY G R Sbjct: 248 MPAAGNHENEVGN-----------GPIGYDAYQTYFAVPDSGSSPQLRGLWYSFTAGSVR 296 Query: 166 F--------CVGDSEHDW---REGTPQYKFIEECLSTVDRKHQ-PWLIFTAHRV-LGYSS 306 C D + + G Q ++++ L+ R + W++ H+ + + Sbjct: 297 VISLHNDDVCYQDGGNSYVRGYSGGEQRRWLQAELANARRDSEIDWVVVCMHQTAISTAD 356 Query: 307 NSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNA------- 465 ++ AD G R+ L+ +Y+VD+ GH H+YER+ PL + + Sbjct: 357 DNNGADLGI------RQEWLPLFDQYQVDLVVCGHEHHYERSHPLRGALGTDTRTPIPVD 410 Query: 466 DKTHYSGTMNGTIFVVAGGGGS 531 ++ + GT+ +V GGGG+ Sbjct: 411 TRSDLIDSTRGTVHLVIGGGGT 432
>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC| 3.1.3.2) (Acid phosphatase PII) Length = 436 Score = 34.7 bits (78), Expect = 0.19 Identities = 21/87 (24%), Positives = 36/87 (41%) Frame = +1 Query: 130 NFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSN 309 NFWY DYG+ F D E D+ +P++ F E+ T + L + Sbjct: 247 NFWYSFDYGLAHFVSIDGETDF-ANSPEWNFAED--------------VTGNETLPSEAE 291 Query: 310 SWYADQGSFEEPEGRESLQKLWQRYRV 390 ++ D G F G K ++++ + Sbjct: 292 TFITDSGPFGNVNGSVHETKSYEQWHL 318
>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)| Length = 539 Score = 32.0 bits (71), Expect = 1.2 Identities = 42/176 (23%), Positives = 65/176 (36%), Gaps = 4/176 (2%) Frame = +1 Query: 13 GNHERDWPNTGGFFDV-KDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEH 189 GNH+ G+FD SG + G PA +R+ +Y D G + F S + Sbjct: 218 GNHDYSTTGAKGYFDYFNGSGNQTG---------PAGDRSKGYYSWDVGDWHFV---SLN 265 Query: 190 DWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQK 369 GT I+ + + +P H L +GS+ G ++ Sbjct: 266 TMSGGTVAQAQIDWLKADLAANTKPCTAAYFHHPL--------LSRGSYS---GYSQVKP 314 Query: 370 LWQRY---RVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGG 528 W + D+ GH HNY+R + N DK + +G V+ G GG Sbjct: 315 FWDALYAAKADLVLVGHDHNYQRYGKM------NPDK---AAASDGIRQVLVGTGG 361
>GLGB_LACAC (Q5FL68) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 638 Score = 31.6 bits (70), Expect = 1.6 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 82 GVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEE 231 G P E + A ++ N D+ FC+ D + +GTP Y+F E+ Sbjct: 211 GTPRELQDFVEACHKENIGVLADWVPGHFCINDDALAYYDGTPCYEFSEK 260
>ZN513_HUMAN (Q8N8E2) Zinc finger protein 513| Length = 479 Score = 30.0 bits (66), Expect = 4.6 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -3 Query: 83 PHSPPESLTSKNPPVLG 33 PHSPP L+S+ PP LG Sbjct: 451 PHSPPSVLSSRGPPALG 467 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,890,779 Number of Sequences: 219361 Number of extensions: 1195544 Number of successful extensions: 3555 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3467 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3549 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
