| Clone Name | basd0h03 |
|---|---|
| Clone Library Name | barley_pub |
>YEE9_SCHPO (O13825) Hypothetical protein C19A8.09 in chromosome I| Length = 81 Score = 53.1 bits (126), Expect = 3e-07 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Frame = +1 Query: 130 NSLAILNEDRFLGPRGWSMSEVSGNGQTK-SLKGQIVGLIYATQ-FLRMPLIALNVLIIV 303 N++AIL+EDRFLG GWS S G G + ++K +I+ LI A + + PLIA+N ++IV Sbjct: 16 NAVAILSEDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVMTFPLIAINTIVIV 75 Query: 304 VKMVSG 321 +V G Sbjct: 76 YNLVLG 81
>YOS1_YEAST (Q3E834) Protein YOS1 (YIP one suppressor protein 1)| Length = 85 Score = 42.4 bits (98), Expect = 5e-04 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%) Frame = +1 Query: 130 NSLAILNEDRFLGPRGWSMSE----VSGNGQTKSLKGQIVGLIYATQ-FLRMPLIALNVL 294 N++A+L+E+RFL G S V G Q + K ++V LI A Q LR+PLI +N+L Sbjct: 18 NAVAVLSEERFLRRIGLGRSNDETPVFGQDQNTT-KSKVVQLIGAVQTLLRIPLIGINIL 76 Query: 295 IIVVKMVSG 321 +IV +++ G Sbjct: 77 VIVYELLLG 85
>OL143_MOUSE (P34985) Olfactory receptor 143 (Olfactory receptor 7A) (Olfactory| receptor 170-6) (Odorant receptor K18) Length = 313 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +1 Query: 325 GSFSCLCCWVDLISVSSIMYNLIMFKTCGKGRSR*L-ECG 441 GS LCC + LIS + I++N+I + GKG S+ L CG Sbjct: 207 GSAIILCCLIILISYAMILFNIIHMSS-GKGWSKALGTCG 245
>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4| (KAISO-like zinc finger protein 1) (KAISO-L1) Length = 1013 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 Query: 135 RICKKQKTLQQHPQAHXSDRPRGVP 61 ++CK L +H Q H ++RP G P Sbjct: 772 KVCKTAAALSRHGQRHAAERPGGTP 796
>BOI2_YEAST (P39969) Protein BOI2 (Protein BEB1)| Length = 1040 Score = 29.3 bits (64), Expect = 4.5 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = -2 Query: 381 HNAGN*NQINPTAETRERASA*HHFHNNDKNIKRYQGHPQKLSGIDEPHDLPLQRLCLPI 202 +NA NQ+ P A +RAS Y+GH +K S DLP Q+ +P Sbjct: 345 NNANIYNQLMPPANVDQRAS--------------YRGHVRKTS--QSLEDLPSQQNFIPT 388 Query: 201 S*NFRHAPSPGTKKAVFIQDSQ 136 N R++ + + + DSQ Sbjct: 389 PRNTRNSSASKHRPKSLVFDSQ 410
>Y392_BUCBP (Q89AC2) Hypothetical UPF0004 protein bbp_392| Length = 445 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = -2 Query: 225 LQRLCLPIS*NFRHAPSPGTKKAVFIQDSQRICKKQKTL 109 ++ L + +S +F ++P PGT A +QD+ +C+KQK L Sbjct: 326 IKDLNIDMSYSFIYSPRPGTP-ASELQDNVTLCEKQKRL 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,006,909 Number of Sequences: 219361 Number of extensions: 1252065 Number of successful extensions: 3503 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3419 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3500 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)