ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd0g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 624 e-176
2emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) ... 470 e-129
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 321 1e-84
4dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 321 1e-84
5dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 321 1e-84
6gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reducta... 109 8e-21
7ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ ... 74 4e-10
8gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reducta... 74 4e-10
9gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map... 74 4e-10
10gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, com... 74 4e-10
11emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
12emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
13emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
14gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 50 0.006
15dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete ... 44 0.40
16gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosom... 42 1.6
17emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 42 1.6
18emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in... 42 1.6
19gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase ge... 42 1.6
20gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
21gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome ... 40 6.2
22gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B... 40 6.2
23emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on ch... 40 6.2
24gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, compl... 40 6.2

>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full
           insert sequence
          Length = 1847

 Score =  624 bits (315), Expect = e-176
 Identities = 423/459 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttg 61
           ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 406 aaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttg 465

                                                                       
Query: 62  tggatgtgaagagcagaccgtttgttattcgtagcagcgaccgagaggtgaaatgtcata 121
           || |||||||||||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 466 tgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggtgaaatgccata 525

                                                                       
Query: 122 gtgtaatcattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaat 181
           ||||||||||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 526 gtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaat 585

                                                                       
Query: 182 tttggagcagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagg 241
           ||||||| ||||||||||| |||||||||||||||||||||||||| || || |  ||||
Sbjct: 586 tttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagg 645

                                                                       
Query: 242 gtcaagttcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttga 301
           ||||||||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 646 gtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttga 705

                                                                       
Query: 302 caaaatatgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaag 361
           | ||||||||  | || ||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 706 ccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaag 765

                                                                       
Query: 362 ctatgcaggaccggttgattatggcgaatgtttcagagtactcaacaaccccaacataac 421
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 766 ctatgcaggaccggttgattatggcgaatgtttcagagtactcaacaatcccaacataac 825

                                                  
Query: 422 agtacatttcaatacagaagctgtggatgttgtcggcaa 460
           |||||||||||||||||||||||||||||||||| ||||
Sbjct: 826 agtacatttcaatacagaagctgtggatgttgtcagcaa 864



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>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin
           reductase (NtrC gene)
          Length = 1684

 Score =  470 bits (237), Expect = e-129
 Identities = 339/373 (90%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttg 61
           ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 379 aaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttg 438

                                                                       
Query: 62  tggatgtgaagagcagaccgtttgttattcgtagcagcgaccgagaggtgaaatgtcata 121
           || |||||||||||||||||||||||||||||||||| || || ||||||||||| ||||
Sbjct: 439 tgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggtgaaatgccata 498

                                                                       
Query: 122 gtgtaatcattgcaactggagctactgcgaagcgacttcgattacctcgtgaagaagaat 181
           ||||||||||||| ||||| ||| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 499 gtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaat 558

                                                                       
Query: 182 tttggagcagaggtatcagcgcatgtgcaatatgtgatggagcatcacctctgtacaagg 241
           ||||||| ||||||||||| |||||||||||||||||||||||||| || || |  ||||
Sbjct: 559 tttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagg 618

                                                                       
Query: 242 gtcaagttcttgcggtcgttggaggtggagatacagctaccgaggaagcgatatatttga 301
           ||||||||||||| || ||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 619 gtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttga 678

                                                                       
Query: 302 caaaatatgcgtgccatgttcatttacttgttcgaagggaccaactacgagcatccaaag 361
           | ||||||||  | || ||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 679 ccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaag 738

                        
Query: 362 ctatgcaggaccg 374
           |||||||||||||
Sbjct: 739 ctatgcaggaccg 751



 Score =  111 bits (56), Expect = 2e-21
 Identities = 62/64 (96%)
 Strand = Plus / Plus

                                                                       
Query: 397 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgttgtcg 456
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 751 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtca 810

               
Query: 457 gcaa 460
           ||||
Sbjct: 811 gcaa 814



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  321 bits (162), Expect = 1e-84
 Identities = 243/270 (90%)
 Strand = Plus / Plus

                                                                            
Query: 107      aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 166
                |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| ||||||||||
Sbjct: 27642273 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 27642332

                                                                            
Query: 167      ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 226
                |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 27642333 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 27642392

                                                                            
Query: 227      cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 286
                | || || |  ||||||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct: 27642393 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 27642452

                                                                            
Query: 287      aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 346
                |||| ||||||||||| ||||||||  | || ||||||||||||||||||| ||| || |
Sbjct: 27642453 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 27642512

                                              
Query: 347      tacgagcatccaaagctatgcaggaccggt 376
                ||||||||||||||||||||||||||||||
Sbjct: 27642513 tacgagcatccaaagctatgcaggaccggt 27642542



 Score =  159 bits (80), Expect = 1e-35
 Identities = 92/96 (95%)
 Strand = Plus / Plus

                                                                            
Query: 3        aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 62
                |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 27641738 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 27641797

                                                    
Query: 63       ggatgtgaagagcagaccgtttgttattcgtagcag 98
                | ||||||||||||||||||||||||||||||||||
Sbjct: 27641798 gaatgtgaagagcagaccgtttgttattcgtagcag 27641833



 Score =  157 bits (79), Expect = 4e-35
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                            
Query: 374      ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 433
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 27643177 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 27643236

                                           
Query: 434      tacagaagctgtggatgttgtcggcaa 460
                |||||||||||||||||||||| ||||
Sbjct: 27643237 tacagaagctgtggatgttgtcagcaa 27643263



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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score =  321 bits (162), Expect = 1e-84
 Identities = 243/270 (90%)
 Strand = Plus / Plus

                                                                         
Query: 107   aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 166
             |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| ||||||||||
Sbjct: 99266 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 99325

                                                                         
Query: 167   ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 226
             |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 99326 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 99385

                                                                         
Query: 227   cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 286
             | || || |  ||||||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct: 99386 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 99445

                                                                         
Query: 287   aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 346
             |||| ||||||||||| ||||||||  | || ||||||||||||||||||| ||| || |
Sbjct: 99446 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 99505

                                           
Query: 347   tacgagcatccaaagctatgcaggaccggt 376
             ||||||||||||||||||||||||||||||
Sbjct: 99506 tacgagcatccaaagctatgcaggaccggt 99535



 Score =  159 bits (80), Expect = 1e-35
 Identities = 92/96 (95%)
 Strand = Plus / Plus

                                                                         
Query: 3     aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 62
             |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 98731 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 98790

                                                 
Query: 63    ggatgtgaagagcagaccgtttgttattcgtagcag 98
             | ||||||||||||||||||||||||||||||||||
Sbjct: 98791 gaatgtgaagagcagaccgtttgttattcgtagcag 98826



 Score =  157 bits (79), Expect = 4e-35
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                          
Query: 374    ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 433
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 100170 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 100229

                                         
Query: 434    tacagaagctgtggatgttgtcggcaa 460
              |||||||||||||||||||||| ||||
Sbjct: 100230 tacagaagctgtggatgttgtcagcaa 100256



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>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score =  321 bits (162), Expect = 1e-84
 Identities = 243/270 (90%)
 Strand = Plus / Plus

                                                                         
Query: 107   aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 166
             |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| ||||||||||
Sbjct: 21375 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 21434

                                                                         
Query: 167   ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 226
             |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 21435 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 21494

                                                                         
Query: 227   cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 286
             | || || |  ||||||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct: 21495 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 21554

                                                                         
Query: 287   aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 346
             |||| ||||||||||| ||||||||  | || ||||||||||||||||||| ||| || |
Sbjct: 21555 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 21614

                                           
Query: 347   tacgagcatccaaagctatgcaggaccggt 376
             ||||||||||||||||||||||||||||||
Sbjct: 21615 tacgagcatccaaagctatgcaggaccggt 21644



 Score =  159 bits (80), Expect = 1e-35
 Identities = 92/96 (95%)
 Strand = Plus / Plus

                                                                         
Query: 3     aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 62
             |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 20840 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 20899

                                                 
Query: 63    ggatgtgaagagcagaccgtttgttattcgtagcag 98
             | ||||||||||||||||||||||||||||||||||
Sbjct: 20900 gaatgtgaagagcagaccgtttgttattcgtagcag 20935



 Score =  157 bits (79), Expect = 4e-35
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                         
Query: 374   ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatttcaa 433
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22279 ggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaa 22338

                                        
Query: 434   tacagaagctgtggatgttgtcggcaa 460
             |||||||||||||||||||||| ||||
Sbjct: 22339 tacagaagctgtggatgttgtcagcaa 22365



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>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680;
           T32G6.20) mRNA, complete cds
          Length = 1802

 Score =  109 bits (55), Expect = 8e-21
 Identities = 214/267 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 617 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 676

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 677 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 736

                                                                       
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggac 342
           ||||||||  | ||| | || ||||||||  | ||||||||||| |||||||| || || 
Sbjct: 737 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcgcagagat 796

                                                                       
Query: 343 caactacgagcatccaaagctatgcaggaccggttgattatggcgaatgtttcagagtac 402
           ||  |  |||| ||||| |||||||| ||  ||||| |||||||||||||||||||||  
Sbjct: 797 cagttgagagcttccaaggctatgcaagataggttggttatggcgaatgtttcagagtga 856

                                      
Query: 403 tcaacaaccccaacataacagtacatt 429
           ||||||| || ||||| ||||| ||||
Sbjct: 857 tcaacaatccaaacatcacagtgcatt 883



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>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron
           transporter/ oxidoreductase/ thioredoxin-disulfide
           reductase AT2G41680 mRNA, complete cds
          Length = 1800

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 623 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 682

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 683 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 742

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 743 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 795



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>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase
           (At2g41680/T32G6.20) mRNA, complete cds
          Length = 1590

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 607 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 666

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 667 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 726

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 727 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 779



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>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete
             sequence
          Length = 91979

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Minus

                                                                         
Query: 163   ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
             |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 79032 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 78973

                                                                         
Query: 223   gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
             || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 78972 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 78913

                                                                  
Query: 283   gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
             ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 78912 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 78860



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 374   ggttgattatggcgaatgtttcagagtactcaacaaccccaacataacagtacatt 429
             ||||| |||||||||||||||||||||  ||||||| || ||||| ||||| ||||
Sbjct: 78480 ggttggttatggcgaatgtttcagagtgatcaacaatccaaacatcacagtgcatt 78425



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>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds
          Length = 1783

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 620 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 679

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 680 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 739

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 740 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 792



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>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1726

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 613 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 672

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 673 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 732

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 733 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 785



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>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZF11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1356

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 250 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 309

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 310 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 369

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 370 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 422



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>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS78ZB05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1730

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 139/173 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 222
           |||||||| || |||||||| ||||| || || || || || ||||| || |||||||||
Sbjct: 624 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 683

                                                                       
Query: 223 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 282
           || || ||| | |  ||||| ||||| ||||| || |||||||| |||||||| ||||| 
Sbjct: 684 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 743

                                                                
Query: 283 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 335
           ||||||||  | ||| | || ||||||||  | ||||||||||| ||||||||
Sbjct: 744 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 796



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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 193     ggtatcagcgcatgtgcaatatgtgatgg 221
               ||||| |||||||||||||||||||||||
Sbjct: 1148142 ggtattagcgcatgtgcaatatgtgatgg 1148170



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>dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete genome
          Length = 17388

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 401   actcaacaaccccaacataaca 422
             ||||||||||||||||||||||
Sbjct: 13569 actcaacaaccccaacataaca 13590



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>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete
             sequence
          Length = 204167

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 291   gatatatttgacaaaatatgc 311
             |||||||||||||||||||||
Sbjct: 52265 gatatatttgacaaaatatgc 52285



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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 259    gttggaggtggagatacagct 279
              |||||||||||||||||||||
Sbjct: 249327 gttggaggtggagatacagct 249347



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>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20,
             complete sequence
          Length = 146568

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   caaccccaacataacagtaca 427
             |||||||||||||||||||||
Sbjct: 50963 caaccccaacataacagtaca 50983



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>gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase gene, complete cds
          Length = 1377

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 259  gttggaggtggagatacagct 279
            |||||||||||||||||||||
Sbjct: 1122 gttggaggtggagatacagct 1142



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>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
              sequence
          Length = 1085720

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     caagaggatgtcgagtttgt 62
              ||||||||||||||||||||
Sbjct: 962574 caagaggatgtcgagtttgt 962555



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>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence
          Length = 234041

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    atatatttgacaaaatatgc 311
              ||||||||||||||||||||
Sbjct: 154499 atatatttgacaaaatatgc 154480



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>gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B5 genomic sequence
          Length = 35254

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   tgtgcaatatgtgatggagc 224
             ||||||||||||||||||||
Sbjct: 17891 tgtgcaatatgtgatggagc 17872



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>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete
              sequence
          Length = 185850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 170    gtgaagaagaattttggagcagaggtat 197
              ||||||||||| ||||||| ||||||||
Sbjct: 104313 gtgaagaagaaatttggagaagaggtat 104340



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>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence
          Length = 158314

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     agtttgtggatgtgaagagc 75
              ||||||||||||||||||||
Sbjct: 109722 agtttgtggatgtgaagagc 109741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,473,147
Number of Sequences: 3902068
Number of extensions: 3473147
Number of successful extensions: 61713
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61633
Number of HSP's gapped (non-prelim): 79
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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