| Clone Name | basd0f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence Length = 164194 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tgccttgccctctaccatcca 106 ||||||||||||||||||||| Sbjct: 93488 tgccttgccctctaccatcca 93508
>emb|AL357272.10| Human DNA sequence from clone RP11-111J1 on chromosome 6, complete sequence Length = 94829 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 attacagatttgaggatgcc 417 |||||||||||||||||||| Sbjct: 3717 attacagatttgaggatgcc 3736
>gb|AC131571.4| Homo sapiens chromosome 11, clone RP11-151O13, complete sequence Length = 179812 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 aagttaagttgcttgatctc 373 |||||||||||||||||||| Sbjct: 106554 aagttaagttgcttgatctc 106535
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgcccggcggccggggaccg 51 |||||||||||||||||||| Sbjct: 315228 cgcccggcggccggggaccg 315209
>gb|AF453325.2| Bos taurus pancreatic anionic trypsinogen (TRYP8) gene, complete cds; germline T-cell receptor beta DJC region genes, partial cds Length = 151480 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gttgtaaatacatctttatg 327 |||||||||||||||||||| Sbjct: 54724 gttgtaaatacatctttatg 54743
>gb|AC087867.5| Genomic sequence for Mus musculus, clone RP23-183P4, complete sequence Length = 217281 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gccaagtcaccatgtgccttgccc 95 ||||||||||||||||| |||||| Sbjct: 19507 gccaagtcaccatgtgctttgccc 19530
>ref|NM_053886.1| Rattus norvegicus lectin, mannose-binding, 1 (Lman1), mRNA Length = 1744 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 gttaagttgcttgatctcca 375 |||||||||||||||||||| Sbjct: 1081 gttaagttgcttgatctcca 1062
>gb|U44129.1|RNU44129 Rattus norvegicus p58 mRNA, complete cds Length = 1744 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 gttaagttgcttgatctcca 375 |||||||||||||||||||| Sbjct: 1081 gttaagttgcttgatctcca 1062
>gb|AC130477.12| Mus musculus chromosome 15, clone RP23-329G19, complete sequence Length = 191771 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tataagtatttgaagcatctttcc 299 |||||||||||| ||||||||||| Sbjct: 58450 tataagtatttgcagcatctttcc 58427
>emb|Z83308.1|HSSRL11M2 Human DNA sequence from clone XX-SRL11M20 on chromosome 11, complete sequence Length = 44373 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 aagttaagttgcttgatctc 373 |||||||||||||||||||| Sbjct: 22126 aagttaagttgcttgatctc 22145
>emb|AL583893.17| Mouse DNA sequence from clone RP23-189A18 on chromosome 15, complete sequence Length = 184558 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 gccaagtcaccatgtgccttgccc 95 ||||||||||||||||| |||||| Sbjct: 145746 gccaagtcaccatgtgctttgccc 145723 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,624,536 Number of Sequences: 3902068 Number of extensions: 3624536 Number of successful extensions: 69267 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69247 Number of HSP's gapped (non-prelim): 20 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)