| Clone Name | basd0d09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2890 Score = 254 bits (128), Expect = 2e-64 Identities = 254/296 (85%) Strand = Plus / Plus Query: 105 aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164 |||||||| ||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137 Query: 165 gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224 || ||||| || || ||||| ||||||||| || |||||||||| ||| ||||| ||| Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttgtt 2197 Query: 225 cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284 ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257 Query: 285 tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317 Query: 345 tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400 ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 2373
>dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J22, full insert sequence Length = 2890 Score = 246 bits (124), Expect = 6e-62 Identities = 253/296 (85%) Strand = Plus / Plus Query: 105 aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164 |||||||| ||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137 Query: 165 gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224 || ||||| || || ||||| ||||||||| || |||||||||| ||| || || ||| Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccggcttgtt 2197 Query: 225 cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284 ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257 Query: 285 tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317 Query: 345 tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400 ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 2373
>dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E10, full insert sequence Length = 2122 Score = 246 bits (124), Expect = 6e-62 Identities = 253/296 (85%) Strand = Plus / Plus Query: 105 aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164 |||||||| ||||||||||||||||||||||||||||||||||| | | |||||||| Sbjct: 1309 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 1368 Query: 165 gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224 || ||||| || || ||||| ||||||||| || |||||||| | ||| ||||| ||| Sbjct: 1369 gaagacttcttaaaagatgtcatgcaatttctacttcagaggaggcacacccgacttgtt 1428 Query: 225 cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284 ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | Sbjct: 1429 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 1488 Query: 285 tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344 ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| Sbjct: 1489 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 1548 Query: 345 tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400 ||||| || |||||||||||||||||| | |||||||| || ||||| | |||||| Sbjct: 1549 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 1604
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 163 aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222 |||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 15883832 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 15883773 Query: 223 ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282 | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| | Sbjct: 15883772 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 15883713 Query: 283 tctataacttgtacaaagaggt 304 | |||||||||||||||||||| Sbjct: 15883712 tatataacttgtacaaagaggt 15883691 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 301 aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360 |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 15883594 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 15883535 Query: 361 tttcaaagatgcgaaaccataccgtaacaaatagaatgacc 401 | || |||||||| |||||||| || ||||||||||||||| Sbjct: 15883534 tctcgaagatgcgtaaccatactgtgacaaatagaatgacc 15883494 Score = 123 bits (62), Expect = 6e-25 Identities = 124/145 (85%) Strand = Plus / Minus Query: 21 aagcatagttcagcacctgcttctacagcagcgcataggaaatnaacttcagggccatct 80 ||||||| ||| | ||||||| || ||||| | ||||| |||| |||||||||||||||| Sbjct: 15884061 aagcataattcggtacctgctgctccagcaacacatagaaaatcaacttcagggccatct 15884002 Query: 81 catgctcaatcgatcattcagctgaatcctcttccaatgaagaaacatgggtgtgatcgg 140 |||||||| || |||||||| ||||| || || || ||||||||||||| ||||||||| Sbjct: 15884001 catgctcagtcaatcattcaactgaacccactgcctctgaagaaacatggatgtgatcgg 15883942 Query: 141 ttgcctatccaagtgtgctctgagg 165 |||||||| || |||||||||||| Sbjct: 15883941 ttgcctattcagatgtgctctgagg 15883917 Score = 44.1 bits (22), Expect = 0.41 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 403 ggtgtcgggaacacactgaaaagacactacgagacctacttgctgggaatatgagcta 460 ||||| || ||||||||||||||||| ||||| || || || || ||||||||||||| Sbjct: 15883087 ggtgttggaaacacactgaaaagacattacgaaacatatttact-ggaatatgagcta 15883031
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Minus Query: 163 aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222 |||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 46958 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 46899 Query: 223 ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282 | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| | Sbjct: 46898 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 46839 Query: 283 tctataacttgtacaaagaggt 304 | |||||||||||||||||||| Sbjct: 46838 tatataacttgtacaaagaggt 46817 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Minus Query: 301 aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360 |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 46720 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 46661 Query: 361 tttcaaagatgcgaaaccataccgtaacaaatagaatgacc 401 | || |||||||| |||||||| || ||||||||||||||| Sbjct: 46660 tctcgaagatgcgtaaccatactgtgacaaatagaatgacc 46620 Score = 123 bits (62), Expect = 6e-25 Identities = 124/145 (85%) Strand = Plus / Minus Query: 21 aagcatagttcagcacctgcttctacagcagcgcataggaaatnaacttcagggccatct 80 ||||||| ||| | ||||||| || ||||| | ||||| |||| |||||||||||||||| Sbjct: 47187 aagcataattcggtacctgctgctccagcaacacatagaaaatcaacttcagggccatct 47128 Query: 81 catgctcaatcgatcattcagctgaatcctcttccaatgaagaaacatgggtgtgatcgg 140 |||||||| || |||||||| ||||| || || || ||||||||||||| ||||||||| Sbjct: 47127 catgctcagtcaatcattcaactgaacccactgcctctgaagaaacatggatgtgatcgg 47068 Query: 141 ttgcctatccaagtgtgctctgagg 165 |||||||| || |||||||||||| Sbjct: 47067 ttgcctattcagatgtgctctgagg 47043 Score = 44.1 bits (22), Expect = 0.41 Identities = 50/58 (86%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 403 ggtgtcgggaacacactgaaaagacactacgagacctacttgctgggaatatgagcta 460 ||||| || ||||||||||||||||| ||||| || || || || ||||||||||||| Sbjct: 46213 ggtgttggaaacacactgaaaagacattacgaaacatatttact-ggaatatgagcta 46157
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 6e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 163 aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222 |||| ||||| || || ||||| ||||||||| || |||||||||| ||| ||||| | Sbjct: 22033755 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 22033696 Query: 223 ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282 ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 22033695 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 22033636 Query: 283 tctataacttgtacaaagaggt 304 | ||||||||||| |||||||| Sbjct: 22033635 tatataacttgtataaagaggt 22033614 Score = 79.8 bits (40), Expect = 8e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 105 aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 148 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 22033912 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 22033869 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 301 aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360 ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 22033493 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 22033434 Query: 361 tttcaaagatgcgaaaccataccgtaacaaatagaatgac 400 ||||||||||| | |||||||| || ||||| | |||||| Sbjct: 22033433 tttcaaagatgagcaaccatactgttacaaacaaaatgac 22033394
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_H01 Length = 128124 Score = 123 bits (62), Expect = 6e-25 Identities = 122/142 (85%) Strand = Plus / Minus Query: 163 aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222 |||| ||||| || || ||||| ||||||||| || |||||||||| ||| ||||| | Sbjct: 119504 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 119445 Query: 223 ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282 ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 119444 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 119385 Query: 283 tctataacttgtacaaagaggt 304 | ||||||||||| |||||||| Sbjct: 119384 tatataacttgtataaagaggt 119363 Score = 79.8 bits (40), Expect = 8e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 105 aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 148 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119661 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 119618 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 301 aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360 ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || ||||||| Sbjct: 119242 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 119183 Query: 361 tttcaaagatgcgaaaccataccgtaacaaatagaatgac 400 ||||||||||| | |||||||| || ||||| | |||||| Sbjct: 119182 tttcaaagatgagcaaccatactgttacaaacaaaatgac 119143
>ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G43240 mRNA, complete cds Length = 2642 Score = 67.9 bits (34), Expect = 3e-08 Identities = 137/170 (80%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 268 caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 327 ||||||| |||||||||| |||||||| | |||||| || || |||| || || ||| Sbjct: 2113 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 2172 Query: 328 tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 387 | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| || | | Sbjct: 2173 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 2232 Query: 388 caaatagaatgacccggtgtcgggaacacactgaaaagacactacgagac 437 |||| ||||||| | ||||| || || || |||||||||||||| ||||| Sbjct: 2233 caaacagaatga-ctggtgtgggtaataccctgaaaagacactatgagac 2281
>gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds Length = 2244 Score = 67.9 bits (34), Expect = 3e-08 Identities = 137/170 (80%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 268 caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 327 ||||||| |||||||||| |||||||| | |||||| || || |||| || || ||| Sbjct: 1811 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 1870 Query: 328 tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 387 | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| || | | Sbjct: 1871 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 1930 Query: 388 caaatagaatgacccggtgtcgggaacacactgaaaagacactacgagac 437 |||| ||||||| | ||||| || || || |||||||||||||| ||||| Sbjct: 1931 caaacagaatga-ctggtgtgggtaataccctgaaaagacactatgagac 1979
>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence Length = 121928 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 264 aatgcaaaacgccttgatctctataacttgtacaaagaggtg 305 |||| |||||||||||||||||| ||||| || ||||||||| Sbjct: 45858 aatggaaaacgccttgatctctacaacttatataaagaggtg 45899 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Plus Query: 330 ggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaaca 389 |||||||| || ||||||||||| ||| |||||||||| ||| |||| | || |||| Sbjct: 46009 ggcaatggcatcaactggaagggacaaatcttttcaaaaatgggaaattacacatcaaca 46068 Query: 390 aatagaatgac 400 ||||||||||| Sbjct: 46069 aatagaatgac 46079
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15 Length = 110800 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Minus Query: 333 aatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaat 392 ||||| || ||||||||||| ||||| || ||||||||||| ||||| || | ||||| Sbjct: 46303 aatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactcacaaac 46244 Query: 393 agaatgac 400 |||||||| Sbjct: 46243 agaatgac 46236
>ref|XM_958243.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial mRNA Length = 888 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 163 aggaggactttttgaaggatgtgatgc 189 |||||||||||||||||| |||||||| Sbjct: 842 aggaggactttttgaaggctgtgatgc 868
>ref|XM_325199.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial mRNA Length = 888 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 163 aggaggactttttgaaggatgtgatgc 189 |||||||||||||||||| |||||||| Sbjct: 842 aggaggactttttgaaggctgtgatgc 868
>emb|BX284748.1|NCB15B24 Neurospora crassa DNA linkage group II BAC clone B15B24 Length = 54958 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 163 aggaggactttttgaaggatgtgatgc 189 |||||||||||||||||| |||||||| Sbjct: 37336 aggaggactttttgaaggctgtgatgc 37362
>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete sequence Length = 102431 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 gtgatgcaatttttaattcag 203 ||||||||||||||||||||| Sbjct: 33487 gtgatgcaatttttaattcag 33467
>emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chromosome 1 Contains putative novel transcript, complete sequence Length = 174648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cagcacctgcttctacagcag 51 ||||||||||||||||||||| Sbjct: 65320 cagcacctgcttctacagcag 65300
>gb|BC100494.1| Mus musculus cDNA clone IMAGE:30916454 Length = 637 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 caggggtggcttttatgtggg 331 ||||||||||||||||||||| Sbjct: 200 caggggtggcttttatgtggg 220
>ref|XM_691475.1| PREDICTED: Danio rerio similar to myeloid/lymphoid or mixed-lineage leukemia 3 (LOC568162), mRNA Length = 10563 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 tcagcacctgcttctacagca 50 ||||||||||||||||||||| Sbjct: 8328 tcagcacctgcttctacagca 8348
>gb|BC050984.1| Mus musculus, clone IMAGE:6771240, mRNA Length = 629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 caggggtggcttttatgtggg 331 ||||||||||||||||||||| Sbjct: 179 caggggtggcttttatgtggg 199
>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence Length = 207846 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 caggggtggcttttatgtggg 331 ||||||||||||||||||||| Sbjct: 75576 caggggtggcttttatgtggg 75596
>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22, complete sequence Length = 157470 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tcagcacctgcttctacagca 50 ||||||||||||||||||||| Sbjct: 39841 tcagcacctgcttctacagca 39821
>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence Length = 206643 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gggtggcttttatgtgggca 333 |||||||||||||||||||| Sbjct: 56380 gggtggcttttatgtgggca 56361
>emb|X97964.1|CJASD C.jejuni asd gene Length = 1679 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cagcacctgcttctacagca 50 |||||||||||||||||||| Sbjct: 557 cagcacctgcttctacagca 538
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome Length = 280334 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcagcacctgcttctacagc 49 |||||||||||||||||||| Sbjct: 246102 tcagcacctgcttctacagc 246083
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome Length = 281083 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcagcacctgcttctacagc 49 |||||||||||||||||||| Sbjct: 246851 tcagcacctgcttctacagc 246832
>ref|XM_311163.2| Anopheles gambiae str. PEST ENSANGP00000001513 (ENSANGG00000001279), partial mRNA Length = 5934 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 cacctgcttctacagcagcg 53 |||||||||||||||||||| Sbjct: 4968 cacctgcttctacagcagcg 4987
>gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203926 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 atcctcttccaatgaagaaa 125 |||||||||||||||||||| Sbjct: 87249 atcctcttccaatgaagaaa 87230
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgactcgttcctcatggagg 235 |||||||||||||||||||| Sbjct: 236663 cgactcgttcctcatggagg 236682 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,880,547 Number of Sequences: 3902068 Number of extensions: 3880547 Number of successful extensions: 69093 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69004 Number of HSP's gapped (non-prelim): 84 length of query: 479 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 457 effective length of database: 17,147,199,772 effective search space: 7836270295804 effective search space used: 7836270295804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)