ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd0d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_482707.1| Oryza sativa (japonica cultivar-group), mRNA 254 2e-64
2dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 6e-62
3dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 6e-62
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
5dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
7dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
8ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein bind... 68 3e-08
9gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds 68 3e-08
10gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete se... 52 0.002
11emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.027
12ref|XM_958243.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.10
13ref|XM_325199.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.10
14emb|BX284748.1|NCB15B24 Neurospora crassa DNA linkage group II B... 46 0.10
15gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H... 42 1.6
16emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chr... 42 1.6
17gb|BC100494.1| Mus musculus cDNA clone IMAGE:30916454 42 1.6
18ref|XM_691475.1| PREDICTED: Danio rerio similar to myeloid/lymph... 42 1.6
19gb|BC050984.1| Mus musculus, clone IMAGE:6771240, mRNA 42 1.6
20gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 42 1.6
21emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 i... 42 1.6
22gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome... 40 6.5
23emb|X97964.1|CJASD C.jejuni asd gene 40 6.5
24gb|AF399011.1| Pseudomonas phage phiKZ, complete genome 40 6.5
25gb|DQ163920.1| Bacteriophage SD1-M, complete genome 40 6.5
26ref|XM_311163.2| Anopheles gambiae str. PEST ENSANGP00000001513 ... 40 6.5
27gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cance... 40 6.5
28gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 6.5

>ref|XM_482707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2890

 Score =  254 bits (128), Expect = 2e-64
 Identities = 254/296 (85%)
 Strand = Plus / Plus

                                                                        
Query: 105  aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137

                                                                        
Query: 165  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224
            || ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |||
Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttgtt 2197

                                                                        
Query: 225  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257

                                                                        
Query: 285  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317

                                                                    
Query: 345  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400
            ||||| || |||||||||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 2373



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>dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J22, full
            insert sequence
          Length = 2890

 Score =  246 bits (124), Expect = 6e-62
 Identities = 253/296 (85%)
 Strand = Plus / Plus

                                                                        
Query: 105  aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 2078 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 2137

                                                                        
Query: 165  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224
            || ||||| || || ||||| ||||||||| || |||||||||| |||   || || |||
Sbjct: 2138 gaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccggcttgtt 2197

                                                                        
Query: 225  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 2198 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 2257

                                                                        
Query: 285  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 2258 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 2317

                                                                    
Query: 345  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400
            ||||| || |||||||||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 2318 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 2373



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>dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E10, full
            insert sequence
          Length = 2122

 Score =  246 bits (124), Expect = 6e-62
 Identities = 253/296 (85%)
 Strand = Plus / Plus

                                                                        
Query: 105  aatcctcttccaatgaagaaacatgggtgtgatcggttgcctatccaagtgtgctctgag 164
            |||||||| |||||||||||||||||||||||||||||||||||   | | |||||||| 
Sbjct: 1309 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctattggaatttgctctgaa 1368

                                                                        
Query: 165  gaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcgtt 224
            || ||||| || || ||||| ||||||||| || |||||||| | |||   ||||| |||
Sbjct: 1369 gaagacttcttaaaagatgtcatgcaatttctacttcagaggaggcacacccgacttgtt 1428

                                                                        
Query: 225  cctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatctc 284
            ||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| | 
Sbjct: 1429 cctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgattta 1488

                                                                        
Query: 285  tataacttgtacaaagaggtggtgtccaggggtggcttttatgtgggcaatggtataaac 344
            ||||||||||| ||||||||||| ||||| || || |||||||| |||||||| ||||| 
Sbjct: 1489 tataacttgtataaagaggtggtatccagaggcggattttatgtaggcaatggcataaat 1548

                                                                    
Query: 345  tggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaatagaatgac 400
            ||||| || |||||||||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 1549 tggaaaggtcaagtcttttcaaagatgagcaaccatactgttacaaacaaaatgac 1604



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  170 bits (86), Expect = 3e-39
 Identities = 128/142 (90%)
 Strand = Plus / Minus

                                                                            
Query: 163      aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222
                |||||||||| ||||||||||| ||||| ||||||||||||||||| ||  |||||||||
Sbjct: 15883832 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 15883773

                                                                            
Query: 223      ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282
                | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| |
Sbjct: 15883772 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 15883713

                                      
Query: 283      tctataacttgtacaaagaggt 304
                | ||||||||||||||||||||
Sbjct: 15883712 tatataacttgtacaaagaggt 15883691



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                            
Query: 301      aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360
                |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 15883594 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 15883535

                                                         
Query: 361      tttcaaagatgcgaaaccataccgtaacaaatagaatgacc 401
                | || |||||||| |||||||| || |||||||||||||||
Sbjct: 15883534 tctcgaagatgcgtaaccatactgtgacaaatagaatgacc 15883494



 Score =  123 bits (62), Expect = 6e-25
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                            
Query: 21       aagcatagttcagcacctgcttctacagcagcgcataggaaatnaacttcagggccatct 80
                ||||||| ||| | ||||||| || ||||| | ||||| |||| ||||||||||||||||
Sbjct: 15884061 aagcataattcggtacctgctgctccagcaacacatagaaaatcaacttcagggccatct 15884002

                                                                            
Query: 81       catgctcaatcgatcattcagctgaatcctcttccaatgaagaaacatgggtgtgatcgg 140
                |||||||| || |||||||| ||||| || || ||  ||||||||||||| |||||||||
Sbjct: 15884001 catgctcagtcaatcattcaactgaacccactgcctctgaagaaacatggatgtgatcgg 15883942

                                         
Query: 141      ttgcctatccaagtgtgctctgagg 165
                |||||||| ||  ||||||||||||
Sbjct: 15883941 ttgcctattcagatgtgctctgagg 15883917



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 50/58 (86%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                          
Query: 403      ggtgtcgggaacacactgaaaagacactacgagacctacttgctgggaatatgagcta 460
                ||||| || ||||||||||||||||| ||||| || || || || |||||||||||||
Sbjct: 15883087 ggtgttggaaacacactgaaaagacattacgaaacatatttact-ggaatatgagcta 15883031



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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score =  170 bits (86), Expect = 3e-39
 Identities = 128/142 (90%)
 Strand = Plus / Minus

                                                                         
Query: 163   aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222
             |||||||||| ||||||||||| ||||| ||||||||||||||||| ||  |||||||||
Sbjct: 46958 aggaggacttcttgaaggatgtcatgcagtttttaattcagaggggtcataatcgactcg 46899

                                                                         
Query: 223   ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282
             | ||||||||||| ||||||||||||||||| || ||||||||||| || |||||||| |
Sbjct: 46898 tacctcatggaggactagctgaatttcctgaggccgtccttaatgcgaagcgccttgacc 46839

                                   
Query: 283   tctataacttgtacaaagaggt 304
             | ||||||||||||||||||||
Sbjct: 46838 tatataacttgtacaaagaggt 46817



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                         
Query: 301   aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360
             |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 46720 aggtggtgtctaggggtggcttttatgtaggcaatggtataaactggaagggtcaagtct 46661

                                                      
Query: 361   tttcaaagatgcgaaaccataccgtaacaaatagaatgacc 401
             | || |||||||| |||||||| || |||||||||||||||
Sbjct: 46660 tctcgaagatgcgtaaccatactgtgacaaatagaatgacc 46620



 Score =  123 bits (62), Expect = 6e-25
 Identities = 124/145 (85%)
 Strand = Plus / Minus

                                                                         
Query: 21    aagcatagttcagcacctgcttctacagcagcgcataggaaatnaacttcagggccatct 80
             ||||||| ||| | ||||||| || ||||| | ||||| |||| ||||||||||||||||
Sbjct: 47187 aagcataattcggtacctgctgctccagcaacacatagaaaatcaacttcagggccatct 47128

                                                                         
Query: 81    catgctcaatcgatcattcagctgaatcctcttccaatgaagaaacatgggtgtgatcgg 140
             |||||||| || |||||||| ||||| || || ||  ||||||||||||| |||||||||
Sbjct: 47127 catgctcagtcaatcattcaactgaacccactgcctctgaagaaacatggatgtgatcgg 47068

                                      
Query: 141   ttgcctatccaagtgtgctctgagg 165
             |||||||| ||  ||||||||||||
Sbjct: 47067 ttgcctattcagatgtgctctgagg 47043



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 50/58 (86%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                       
Query: 403   ggtgtcgggaacacactgaaaagacactacgagacctacttgctgggaatatgagcta 460
             ||||| || ||||||||||||||||| ||||| || || || || |||||||||||||
Sbjct: 46213 ggtgttggaaacacactgaaaagacattacgaaacatatttact-ggaatatgagcta 46157



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  123 bits (62), Expect = 6e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                            
Query: 163      aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222
                |||| ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |
Sbjct: 22033755 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 22033696

                                                                            
Query: 223      ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282
                ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| 
Sbjct: 22033695 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 22033636

                                      
Query: 283      tctataacttgtacaaagaggt 304
                | ||||||||||| ||||||||
Sbjct: 22033635 tatataacttgtataaagaggt 22033614



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                            
Query: 105      aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 148
                |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 22033912 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 22033869



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                            
Query: 301      aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360
                ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || |||||||
Sbjct: 22033493 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 22033434

                                                        
Query: 361      tttcaaagatgcgaaaccataccgtaacaaatagaatgac 400
                ||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 22033433 tttcaaagatgagcaaccatactgttacaaacaaaatgac 22033394



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>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_H01
          Length = 128124

 Score =  123 bits (62), Expect = 6e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                          
Query: 163    aggaggactttttgaaggatgtgatgcaatttttaattcagaggggccaccatcgactcg 222
              |||| ||||| || || ||||| ||||||||| || |||||||||| |||   ||||| |
Sbjct: 119504 aggaagacttcttaaaagatgtcatgcaatttctacttcagagggggcacacccgacttg 119445

                                                                          
Query: 223    ttcctcatggaggtctagctgaatttcctgatgcagtccttaatgcaaaacgccttgatc 282
              ||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| 
Sbjct: 119444 ttcctcaaggaggactagccgaatttcctgatgcagtactaaatgcaaaacgccttgatt 119385

                                    
Query: 283    tctataacttgtacaaagaggt 304
              | ||||||||||| ||||||||
Sbjct: 119384 tatataacttgtataaagaggt 119363



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                          
Query: 105    aatcctcttccaatgaagaaacatgggtgtgatcggttgcctat 148
              |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 119661 aatcctctgccaatgaagaaacatgggtgtgatcggttgcctat 119618



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                          
Query: 301    aggtggtgtccaggggtggcttttatgtgggcaatggtataaactggaagggccaagtct 360
              ||||||| ||||| || || |||||||| |||||||| ||||| ||||| || |||||||
Sbjct: 119242 aggtggtatccagaggcggattttatgtaggcaatggcataaattggaaaggtcaagtct 119183

                                                      
Query: 361    tttcaaagatgcgaaaccataccgtaacaaatagaatgac 400
              ||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 119182 tttcaaagatgagcaaccatactgttacaaacaaaatgac 119143



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>ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding
            AT3G43240 mRNA, complete cds
          Length = 2642

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 137/170 (80%), Gaps = 1/170 (0%)
 Strand = Plus / Plus

                                                                        
Query: 268  caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 327
            ||||||| ||||||||||  |||||||| | |||||| || ||  |||| || ||  |||
Sbjct: 2113 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 2172

                                                                        
Query: 328  tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 387
            | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | |
Sbjct: 2173 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 2232

                                                              
Query: 388  caaatagaatgacccggtgtcgggaacacactgaaaagacactacgagac 437
            |||| ||||||| | ||||| || || || |||||||||||||| |||||
Sbjct: 2233 caaacagaatga-ctggtgtgggtaataccctgaaaagacactatgagac 2281



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>gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds
          Length = 2244

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 137/170 (80%), Gaps = 1/170 (0%)
 Strand = Plus / Plus

                                                                        
Query: 268  caaaacgccttgatctctataacttgtacaaagaggtggtgtccaggggtggcttttatg 327
            ||||||| ||||||||||  |||||||| | |||||| || ||  |||| || ||  |||
Sbjct: 1811 caaaacggcttgatctcttcaacttgtatagagaggttgtatcacggggagggttccatg 1870

                                                                        
Query: 328  tgggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaa 387
            | || ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | |
Sbjct: 1871 taggtaatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactca 1930

                                                              
Query: 388  caaatagaatgacccggtgtcgggaacacactgaaaagacactacgagac 437
            |||| ||||||| | ||||| || || || |||||||||||||| |||||
Sbjct: 1931 caaacagaatga-ctggtgtgggtaataccctgaaaagacactatgagac 1979



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>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence
          Length = 121928

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 264   aatgcaaaacgccttgatctctataacttgtacaaagaggtg 305
             |||| |||||||||||||||||| ||||| || |||||||||
Sbjct: 45858 aatggaaaacgccttgatctctacaacttatataaagaggtg 45899



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 330   ggcaatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaaca 389
             |||||||| || ||||||||||| ||| |||||||||| ||| ||||  | ||   ||||
Sbjct: 46009 ggcaatggcatcaactggaagggacaaatcttttcaaaaatgggaaattacacatcaaca 46068

                        
Query: 390   aatagaatgac 400
             |||||||||||
Sbjct: 46069 aatagaatgac 46079



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>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15
          Length = 110800

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 333   aatggtataaactggaagggccaagtcttttcaaagatgcgaaaccataccgtaacaaat 392
             ||||| || ||||||||||| ||||| || ||||||||||| ||||| ||  | ||||| 
Sbjct: 46303 aatgggatcaactggaagggacaagttttctcaaagatgcgcaaccacacactcacaaac 46244

                     
Query: 393   agaatgac 400
             ||||||||
Sbjct: 46243 agaatgac 46236



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>ref|XM_958243.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial
           mRNA
          Length = 888

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 163 aggaggactttttgaaggatgtgatgc 189
           |||||||||||||||||| ||||||||
Sbjct: 842 aggaggactttttgaaggctgtgatgc 868



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>ref|XM_325199.1| Neurospora crassa OR74A hypothetical protein (NCU05345.1) partial
           mRNA
          Length = 888

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 163 aggaggactttttgaaggatgtgatgc 189
           |||||||||||||||||| ||||||||
Sbjct: 842 aggaggactttttgaaggctgtgatgc 868



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>emb|BX284748.1|NCB15B24 Neurospora crassa DNA linkage group II BAC clone B15B24
          Length = 54958

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 163   aggaggactttttgaaggatgtgatgc 189
             |||||||||||||||||| ||||||||
Sbjct: 37336 aggaggactttttgaaggctgtgatgc 37362



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>gb|AC005213.1| Homo sapiens chromosome 5, BAC clone 84E9 (LBNL H120), complete
             sequence
          Length = 102431

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   gtgatgcaatttttaattcag 203
             |||||||||||||||||||||
Sbjct: 33487 gtgatgcaatttttaattcag 33467



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>emb|AL691497.8| Human DNA sequence from clone RP11-542C10 on chromosome 1 Contains
             putative novel transcript, complete sequence
          Length = 174648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    cagcacctgcttctacagcag 51
             |||||||||||||||||||||
Sbjct: 65320 cagcacctgcttctacagcag 65300



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>gb|BC100494.1| Mus musculus cDNA clone IMAGE:30916454
          Length = 637

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 caggggtggcttttatgtggg 331
           |||||||||||||||||||||
Sbjct: 200 caggggtggcttttatgtggg 220



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>ref|XM_691475.1| PREDICTED: Danio rerio similar to myeloid/lymphoid or mixed-lineage
            leukemia 3 (LOC568162), mRNA
          Length = 10563

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   tcagcacctgcttctacagca 50
            |||||||||||||||||||||
Sbjct: 8328 tcagcacctgcttctacagca 8348



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>gb|BC050984.1| Mus musculus, clone IMAGE:6771240, mRNA
          Length = 629

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 caggggtggcttttatgtggg 331
           |||||||||||||||||||||
Sbjct: 179 caggggtggcttttatgtggg 199



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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   caggggtggcttttatgtggg 331
             |||||||||||||||||||||
Sbjct: 75576 caggggtggcttttatgtggg 75596



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>emb|BX324233.5| Zebrafish DNA sequence from clone CH211-230L11 in linkage group 22,
             complete sequence
          Length = 157470

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    tcagcacctgcttctacagca 50
             |||||||||||||||||||||
Sbjct: 39841 tcagcacctgcttctacagca 39821



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>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence
          Length = 206643

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   gggtggcttttatgtgggca 333
             ||||||||||||||||||||
Sbjct: 56380 gggtggcttttatgtgggca 56361



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>emb|X97964.1|CJASD C.jejuni asd gene
          Length = 1679

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cagcacctgcttctacagca 50
           ||||||||||||||||||||
Sbjct: 557 cagcacctgcttctacagca 538



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>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome
          Length = 280334

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tcagcacctgcttctacagc 49
              ||||||||||||||||||||
Sbjct: 246102 tcagcacctgcttctacagc 246083



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>gb|DQ163920.1| Bacteriophage SD1-M, complete genome
          Length = 281083

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tcagcacctgcttctacagc 49
              ||||||||||||||||||||
Sbjct: 246851 tcagcacctgcttctacagc 246832



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>ref|XM_311163.2| Anopheles gambiae str. PEST ENSANGP00000001513 (ENSANGG00000001279),
            partial mRNA
          Length = 5934

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   cacctgcttctacagcagcg 53
            ||||||||||||||||||||
Sbjct: 4968 cacctgcttctacagcagcg 4987



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>gb|AC153599.6| Mus musculus 6 BAC RP23-227G6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203926

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   atcctcttccaatgaagaaa 125
             ||||||||||||||||||||
Sbjct: 87249 atcctcttccaatgaagaaa 87230



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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cgactcgttcctcatggagg 235
              ||||||||||||||||||||
Sbjct: 236663 cgactcgttcctcatggagg 236682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,880,547
Number of Sequences: 3902068
Number of extensions: 3880547
Number of successful extensions: 69093
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69004
Number of HSP's gapped (non-prelim): 84
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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