>FP1_MYTED (Q25460) Adhesive plaque matrix protein (Polyphenolic adhesive|
           protein) (Foot protein 1) (MEFP1) (Fragment)
          Length = 875

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 24/85 (28%), Positives = 30/85 (35%)
 Frame = -2

Query: 299 PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPPLLLPNWFPKSPEWRASTYR 120
           PS  T K+YP    A P  P         P        YPP        K+     STY+
Sbjct: 159 PSYKTKKTYPSSYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYPSTYK 218

Query: 119 SCVKARMMTNASSTLRRHPRYPPTW 45
           +         A  T +  P YPPT+
Sbjct: 219 AKPSYPPTYKAKPTYKAKPSYPPTY 243

>STK39_RAT (O88506) STE20/SPS1-related proline-alanine-rich protein kinase (EC|
           2.7.11.1) (Ste-20-related kinase)
           (Serine/threonine-protein kinase 39) (Pancreatic
           serine/threonine-protein kinase) (PS/TK) (PSTK1)
          Length = 553

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = -2

Query: 356 PYVTQLTQIRTSTVQRIIHPSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYP 180
           P   QL Q           P+ AT+   P    A P  P P    +P PAP A + G+P
Sbjct: 8   PVHVQLPQQAAPVTAAAAAPAAATSAPAPAPAPAAPAAPAPAPAAAPAPAPAAQAVGWP 66

>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4|
           (Immediate-early protein IE175)
          Length = 1415

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 185 YPPLLLPNWFPKSPEWRASTYRSCVKARMMTNASSTLRRHPR 60
           +PPL +P+W   S +WR S  RS  K     +  + L   PR
Sbjct: 56  FPPLPVPDWNNPSTDWRPSPPRSGPKKDFCGDLPAPLTSGPR 97

>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 257 ATPPVPMPLLWWSPTPAP*AC-SAGYPPLLLPNWFPKSPEWRA 132
           A PP P P++   P P P    S G PP   P  FP  P++ A
Sbjct: 321 APPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA 363

>PCDAB_HUMAN (Q9Y5I1) Protocadherin alpha 11 precursor (PCDH-alpha11)|
          Length = 949

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 230 LWWSPTPAP*ACSAGYPPLL 171
           LWWS TP   AC+ G P L+
Sbjct: 720 LWWSATPTEGACAPGKPTLV 739

>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)|
          Length = 1426

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 299  PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 177
            P L +A + P+  L +P +P P   W+ +P P   S G PP
Sbjct: 909  PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 948

>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 299  PSLATAKSYPI*TLATPPVPMPLLWWSPTPAP*ACSAGYPP 177
            P L +A + P+  L +P +P P   W+ +P P   S G PP
Sbjct: 908  PVLGSAAASPV-HLKSPSLPAPSPGWTSSPKPPLQSPGIPP 947


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,447,127
Number of Sequences: 219361
Number of extensions: 1181665
Number of successful extensions: 3205
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3179
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)