ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd27o01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY243565.1| Hordeum vulgare chloroplast Ndh complex operon, complete sequence Length = 1778 Score = 527 bits (266), Expect = e-147 Identities = 285/289 (98%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctccttttcgccatgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 303 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 243 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 183 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 123 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122 cactaaccggggctaaaagccctgaaatc--gaaaatgccaaaatagga 76
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 511 bits (258), Expect = e-142 Identities = 283/289 (97%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 49901 ctccttttcgccatgcataaactaaaccaacaactaagataagcacgaaaatcaaagctt 49960 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49961 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 50020 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50021 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 50080 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50081 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 50140 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 50141 cactaaccggggctaaaagtcctgaaatc--gaaaatgccaaaatagga 50187
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 511 bits (258), Expect = e-142 Identities = 283/289 (97%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 590 ctccttttcgccatgcataaactaaaccaacaactaagataagcacgaaaatcaaagctt 531 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 471 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 411 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 351 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 350 cactaaccggggctaaaagtcctgaaatc--gaaaatgccaaaatagga 304
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 440 bits (222), Expect = e-120 Identities = 274/289 (94%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 51872 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 51931 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51932 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 51991 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 51992 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52051 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52052 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52111 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 52112 cactaaccggggctaaaagtcctgaaatcc--aaaataccaaaatagga 52158
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 440 bits (222), Expect = e-120 Identities = 274/289 (94%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 114026 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 114085 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 114086 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 114145 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 114146 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 114205 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114206 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 114265 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 114266 cactaaccggggctaaaagtcctgaaatcc--aaaataccaaaatagga 114312
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 440 bits (222), Expect = e-120 Identities = 274/289 (94%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 51861 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 51920 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51921 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 51980 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 51981 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52040 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52041 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52100 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 52101 cactaaccggggctaaaagtcctgaaatcc--aaaataccaaaatagga 52147
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 440 bits (222), Expect = e-120 Identities = 274/289 (94%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 52399 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 52458 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 52459 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 52518 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 52519 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 52578 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52579 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 52638 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 52639 cactaaccggggctaaaagtcctgaaatcc--aaaataccaaaatagga 52685
>emb|X17438.1|CHZMNPOO Maize chloroplast ndhC, psbG genes for NDH-C, PSII-G and ORF159 Length = 1933 Score = 434 bits (219), Expect = e-119 Identities = 273/289 (94%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 432 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 373 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 372 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtagagaaagactg 313 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 312 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 253 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 252 accaagccccccccatgggttctatacccgantcataactagaaagcttctctggtcctt 193 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 192 cactaaccggggctaaaagtcctgaaatcc--aaaataccaaaatagga 146
>ref|NM_197447.1| Oryza sativa (japonica cultivar-group) NADH dehydrogenase ND3 (OSJNBb0005J14.29), mRNA Length = 363 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 346 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 286 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 226 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 107 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 106 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 60
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49310 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49369 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49370 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49429 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49430 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49489 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49490 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49549 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 49550 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 49596
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49310 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49369 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49370 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49429 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49430 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49489 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49490 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49549 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 49550 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 49596
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49258 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49317 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49318 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49377 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49378 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49437 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49438 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49497 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 49498 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 49544
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49317 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49376 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49377 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49436 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49437 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49496 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49497 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49556 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 49557 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 49603
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 11285472 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 11285531 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 11285532 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 11285591 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 11285592 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 11285651 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11285652 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 11285711 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 11285712 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 11285758 Score = 400 bits (202), Expect = e-109 Identities = 255/270 (94%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 5608348 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 5608407 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 5608408 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 5608467 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 5608468 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 5608527 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608528 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 5608586 Query: 240 cactaaccggggctaaaagccctgaaatcc 269 ||| |||||| |||||||| ||||||||| Sbjct: 5608587 cacgaaccggagctaaaagtgctgaaatcc 5608616
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 19945292 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 19945233 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 19945232 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 19945173 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 19945172 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 19945113 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945112 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 19945053 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 19945052 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 19945006 Score = 408 bits (206), Expect = e-111 Identities = 271/289 (93%), Gaps = 4/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 10341121 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 10341180 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 10341181 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 10341240 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10341241 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 10341300 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10341301 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 10341359 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 10341360 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 10341406
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 40751 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 40810 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 40811 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 40870 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 40871 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 40930 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40931 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 40990 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 40991 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 41037
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 19956568 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 19956509 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 19956508 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 19956449 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 19956448 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 19956389 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19956388 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 19956329 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 19956328 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 19956282 Score = 408 bits (206), Expect = e-111 Identities = 271/289 (93%), Gaps = 4/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 10347160 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 10347219 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 10347220 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 10347279 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10347280 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 10347339 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10347340 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 10347398 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 10347399 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 10347445
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 11285143 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 11285202 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 11285203 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 11285262 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 11285263 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 11285322 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11285323 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 11285382 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 11285383 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 11285429 Score = 400 bits (202), Expect = e-109 Identities = 255/270 (94%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 5608337 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 5608396 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 5608397 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 5608456 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 5608457 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 5608516 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5608517 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 5608575 Query: 240 cactaaccggggctaaaagccctgaaatcc 269 ||| |||||| |||||||| ||||||||| Sbjct: 5608576 cacgaaccggagctaaaagtgctgaaatcc 5608605
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 86582 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 86523 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 86522 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 86463 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 86462 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 86403 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 86343 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 86342 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 86296
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 416 bits (210), Expect = e-113 Identities = 271/289 (93%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 49237 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 49296 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 49297 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 49356 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 49357 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 49416 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49417 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 49476 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 49477 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 49523
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 408 bits (206), Expect = e-111 Identities = 271/289 (93%), Gaps = 4/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 47513 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 47572 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 47573 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 47632 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 47633 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 47692 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47693 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 47751 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 47752 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 47798
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 408 bits (206), Expect = e-111 Identities = 271/289 (93%), Gaps = 4/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 122446 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 122505 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 122506 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 122565 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 122566 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 122625 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122626 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 122684 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct: 122685 cacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatagga 122731
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 33553316 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 33553257 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 33553256 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 33553197 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 33553196 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 33553137 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33553136 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 33553077 Query: 240 cactaaccggggctaaaag 258 ||| |||||| |||||||| Sbjct: 33553076 cacgaaccggagctaaaag 33553058 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 33512946 tagcgtattcggaattgtaaccaagc 33512971 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 33512872 aaacggaaacgcccaatacatcgaaactcattaccca 33512908 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 2523840 aaacggaaacgcccaatacatcgaaactcattaccca 2523876
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 402 bits (203), Expect = e-109 Identities = 246/259 (94%), Gaps = 1/259 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 98513 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 98454 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 98453 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 98394 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 98393 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 98334 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98333 accaagccccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 98274 Query: 240 cactaaccggggctaaaag 258 ||| |||||| |||||||| Sbjct: 98273 cacgaaccggagctaaaag 98255 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 58143 tagcgtattcggaattgtaaccaagc 58168 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 58069 aaacggaaacgcccaatacatcgaaactcattaccca 58105
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 400 bits (202), Expect = e-109 Identities = 255/270 (94%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 44537 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 44478 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 44477 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 44418 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 44417 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 44358 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44357 accaagcccc-cccatgggttctatacccgattcataactagaaagcttctctggtcctt 44299 Query: 240 cactaaccggggctaaaagccctgaaatcc 269 ||| |||||| |||||||| ||||||||| Sbjct: 44298 cacgaaccggagctaaaagtgctgaaatcc 44269
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 377 bits (190), Expect = e-101 Identities = 271/294 (92%), Gaps = 8/294 (2%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 81229 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 81170 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 81169 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 81110 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 81109 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 81050 Query: 180 cccaag----cccctcccatgggttctatacccgattcataactagaaagcttctctggt 235 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81049 accaagccccccccccccatgggttctatacccgattcataactagaaagcttctctggt 80990 Query: 236 ccttcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 80989 ccttcacaaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 80938
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 377 bits (190), Expect = e-101 Identities = 271/294 (92%), Gaps = 8/294 (2%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct: 9749023 ctccttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagctt 9748964 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 9748963 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 9748904 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 9748903 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgta 9748844 Query: 180 cccaag----cccctcccatgggttctatacccgattcataactagaaagcttctctggt 235 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9748843 accaagccccccccccccatgggttctatacccgattcataactagaaagcttctctggt 9748784 Query: 236 ccttcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 9748783 ccttcacaaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 9748732 Score = 373 bits (188), Expect = e-100 Identities = 269/291 (92%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 14047935 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 14047994 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 14047995 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 14048054 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 14048055 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 14048114 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14048115 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 14048174 Query: 239 tcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 14048175 tcacgaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 14048223 Score = 333 bits (168), Expect = 2e-88 Identities = 222/239 (92%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 48 aaatcaaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggt 107 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 23634943 aaatgaaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggt 23635002 Query: 108 atagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgta 167 | |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 23635003 agagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgta 23635062 Query: 168 ttcggaattgtacccaagcccctcccatgggttctatacccgattcataactagaaagct 227 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 23635063 ttcggaattgtaaccaagccccccccatgggttctatacccgattcataactagaaagct 23635122 Query: 228 tctctggtccttcactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatag 286 ||||||||||||||| |||||| |||||||| ||||||||| ||||||| ||||||| Sbjct: 23635123 tctctggtccttcacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatag 23635179
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 375 bits (189), Expect = e-101 Identities = 251/270 (92%), Gaps = 5/270 (1%) Strand = Plus / Minus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 12589470 ttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgat 12589411 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 12589410 aaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttc 12589351 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct: 12589350 cacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaacca 12589291 Query: 184 agcc----cctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12589290 agcctcctccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 12589231 Query: 240 cactaaccggggctaaaagccctgaaatcc 269 ||| |||||| |||||||| ||||||||| Sbjct: 12589230 cacgaaccggagctaaaagtgctgaaatcc 12589201
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 375 bits (189), Expect = e-101 Identities = 251/270 (92%), Gaps = 5/270 (1%) Strand = Plus / Minus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| Sbjct: 71783 ttttcgccatgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgat 71724 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 71723 aaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttc 71664 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||| Sbjct: 71663 cacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaacca 71604 Query: 184 agcc----cctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71603 agcctcctccccccatgggttctatacccgattcataactagaaagcttctctggtcctt 71544 Query: 240 cactaaccggggctaaaagccctgaaatcc 269 ||| |||||| |||||||| ||||||||| Sbjct: 71543 cacgaaccggagctaaaagtgctgaaatcc 71514
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 373 bits (188), Expect = e-100 Identities = 269/291 (92%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 161815 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 161874 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 161875 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 161934 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 161935 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 161994 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161995 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 162054 Query: 239 tcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 162055 tcacgaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 162103
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08, complete sequence Length = 141899 Score = 373 bits (188), Expect = e-100 Identities = 269/291 (92%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 124957 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 124898 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 124897 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 124838 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 124837 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 124778 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124777 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 124718 Query: 239 tcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 124717 tcacgaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 124669
>dbj|AK069240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F18, full insert sequence Length = 3557 Score = 373 bits (188), Expect = e-100 Identities = 269/291 (92%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 1806 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 1747 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1746 cgataaaaacggatatacccaatacgtcgaaactcattgcccaagggtagagaaagaccg 1687 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 1686 tttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgta 1627 Query: 180 cccaag-cccctcccatgggttctatacccgattcataactagaaagcttctctggtcct 238 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1626 accaagcccccccccatgggttctatacccgattcataactagaaagcttctctggtcct 1567 Query: 239 tcactaaccggggc-taaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| |||||| || |||||| ||||||||| ||||||| ||||||||| Sbjct: 1566 tcacgaaccggagcttaaaagtgctgaaatcc--aaaatgctaaaatagga 1518
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 333 bits (168), Expect = 2e-88 Identities = 222/239 (92%), Gaps = 2/239 (0%) Strand = Plus / Plus Query: 48 aaatcaaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggt 107 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 77624 aaatgaaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggt 77683 Query: 108 atagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgta 167 | |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 77684 agagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgta 77743 Query: 168 ttcggaattgtacccaagcccctcccatgggttctatacccgattcataactagaaagct 227 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 77744 ttcggaattgtaaccaagccccccccatgggttctatacccgattcataactagaaagct 77803 Query: 228 tctctggtccttcactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatag 286 ||||||||||||||| |||||| |||||||| ||||||||| ||||||| ||||||| Sbjct: 77804 tctctggtccttcacgaaccggagctaaaagtgctgaaatcc--aaaatgctaaaatag 77860
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 266 bits (134), Expect = 4e-68 Identities = 249/285 (87%), Gaps = 3/285 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||| || ||||||||||||||| ||||||| Sbjct: 54163 ctccttttcgccatgcataaactgaaccaacaattaggataagcacgaaaattaaagctt 54222 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| ||||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 54223 ctataaatacggatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 54282 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||| |||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 54283 tttcaacatcaaaaacgacaaaaactagagcaaacatataataacggattcgaaattgta 54342 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 54343 accaagcatcgcccattggttctatacccgattcataactagaaagtttctctggtcctt 54402 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaat 284 ||||| ||| ||||||| || ||||| |||||||||||||| Sbjct: 54403 tactaatcggagctaaaactccggaaata--aaaaatgccaaaat 54445
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 264 bits (133), Expect = 1e-67 Identities = 241/276 (87%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| ||||| || || Sbjct: 52199 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctataaatacaga 52258 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| ||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52259 tacacctaatacatcgaaactcattgcccatggataaagaaaaactgtttcaacatcaaa 52318 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| || Sbjct: 52319 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcattgcc 52378 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||||||||||||||| || |||||||| |||| |||| |||||| Sbjct: 52379 cattggttctatacccgattcataactagagagtttctctggccctttgctaatcggggc 52438 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||| ||| ||||| ||||||||||||||||||| Sbjct: 52439 taaaaccccggaaat--gaaaaatgccaaaatagga 52472
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 262 bits (132), Expect = 5e-67 Identities = 204/228 (89%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 |||||||||| |||| |||| || |||||||||||||||||||||||| | ||| ||||| Sbjct: 50654 tgcataaactgaaccaacaattaggataagcacgaaaatcaaagcttctagaaatacgga 50713 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||| ||||||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 50714 tacacccaatacatcgaaactcattgcccatggataaagaaagaccgtttcaacatcaaa 50773 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| | |||||||||||||| || |||||||||||||||||||| | || Sbjct: 50774 aacaacaaaaactaaagcaaacatataatatcggattcggaattgtacccaagcatcccc 50833 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttc 240 || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 50834 tattggttctatacccgattcataactagaaagcttctcgggtccttc 50881
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 258 bits (130), Expect = 9e-66 Identities = 227/258 (87%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| |||||||||| |||| |||| | ||||||||||||||| ||||||| Sbjct: 50996 ctccctttcgccatgcataaactgaaccaacaattgggataagcacgaaaattaaagctt 51055 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| || |||||||||| ||| ||||||||||||||||| || || |||||||| | Sbjct: 51056 ctataaatacagatacacccagtacatcgaaactcattgcccatggataaagaaagaccg 51115 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||||| Sbjct: 51116 tttcaacatcaaaaacaacaaaaactagagcaaacatgtaatagcggattcggaattgta 51175 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 51176 accaagcatcccccattggttctatacctgattcataactagagagcttctctggtcctt 51235 Query: 240 cactaaccggggctaaaa 257 ||| || ||||||||||| Sbjct: 51236 cacgaatcggggctaaaa 51253
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 256 bits (129), Expect = 3e-65 Identities = 240/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51421 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51480 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51481 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51540 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51541 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51600 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| |||||||| |||| |||| |||||| Sbjct: 51601 cattggttctatacccgactcataagtagaaagtttctctggccctttgctaatcggggc 51660 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 51661 taacactccggaaat--gaaaaatgccaaaatagga 51694
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 256 bits (129), Expect = 3e-65 Identities = 240/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51417 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51476 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51477 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51536 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51537 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51596 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| |||||||| |||| |||| |||||| Sbjct: 51597 cattggttctatacccgactcataagtagaaagtttctctggccctttgctaatcggggc 51656 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 51657 taacactccggaaat--gaaaaatgccaaaatagga 51690
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 254 bits (128), Expect = 1e-64 Identities = 250/289 (86%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| |||| || ||||||||||||||| ||||||| Sbjct: 54376 ctccttttcgccatgcataaactaaaccaacaattaggataagcacgaaaattaaagctt 54435 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| || | Sbjct: 54436 ctataaatacggatacccccaatacatcgaaactcattgcccatggataaagaaaaaccg 54495 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 54496 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 54555 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||| ||||| |||||||| |||| Sbjct: 54556 accaagcatcgcccattggttctatacctgattcataactcgaaagtttctctggccctt 54615 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| ||||||||||| || ||||| | |||||||||||||||| Sbjct: 54616 tgctaatcggggctaaaattccggaaattmg--aaatgccaaaatagga 54662
>gb|AY936338.1| Jacquemontia tamnifolia NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1706 Score = 252 bits (127), Expect = 5e-64 Identities = 238/274 (86%), Gaps = 2/274 (0%) Strand = Plus / Minus Query: 15 cataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacggata 74 ||||||||||||| ||| |||||||||||| |||||||||||||| ||||| || |||| Sbjct: 331 cataaactaaaccaccaattaagataagcacaaaaatcaaagcttctataaatacagata 272 Query: 75 cacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaaaa 134 ||||||||| ||||||||||||||||| || || ||||| || ||||| |||||||||| Sbjct: 271 gacccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaaaa 212 Query: 135 caacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctccca 194 ||||||||||||| |||||||||||||| || ||||| ||||||| |||||| | |||| Sbjct: 211 caacaaaaacgagagcaaacatataataacggattcgaaattgtaaccaagcatcgccca 152 Query: 195 tgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggcta 254 ||||||| ||||| ||||||||||||||||| |||||||| |||| |||| |||||||| Sbjct: 151 tgggttcgataccggattcataactagaaagtttctctgggcctttgctaatcggggcta 92 Query: 255 aaagccctgaaatccgaaaaatgccaaaatagga 288 ||| || |||||| ||||| |||||||||||| Sbjct: 91 aaacgccggaaatc--aaaaaagccaaaatagga 60
>gb|AY936342.1| Evolvulus glomeratus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1744 Score = 250 bits (126), Expect = 2e-63 Identities = 250/289 (86%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||| ||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacaaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 ||| ||| || |||||||||||||| ||||||||||||||||| ||||| ||||| || | Sbjct: 286 cgagaaatacagatacacccaatacatcgaaactcattgcccatgggtaaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166 accaagcatcgcccattggttctatacctgattcataactagaaagtttctctggcccct 107 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| ||||||||||| ||| |||||| ||||| | |||||||||| Sbjct: 106 tgctaatcggggctaaaaccccggaaatc--aaaaaagtcaaaatagga 60
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 250 bits (126), Expect = 2e-63 Identities = 250/289 (86%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||| Sbjct: 53848 ctccttttcgccatgcataaactgaaccaacaactgggataagcacgaaaatcaaagctt 53907 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| ||| |||| ||||||| || ||||||| ||||| || || |||||||| | Sbjct: 53908 ctataaatacgtatacgcccaatatatcaaaactcacggcccatggataaagaaagaccg 53967 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 53968 tttcgacatcaaaaacaacaaaaacgagagcaaacatgtaatagcggattcgaaattgta 54027 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 54028 tccaagcatcccctattggttctatacccgattcataactggagagcttctctggtcctt 54087 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 |||||| |||||||||| ||| ||||| | |||||||||||||||| Sbjct: 54088 cactaattggggctaaaaccccggaaat--tagaaatgccaaaatagga 54134
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 250 bits (126), Expect = 2e-63 Identities = 226/258 (87%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| |||| || ||||||||||||||| ||||||| Sbjct: 48999 ctccttttcgccatgcataaactaaaccaacaattaggataagcacgaaaattaaagctt 49058 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 49059 ctataaatacggatacacccaatatatcgaaactcattgcccatggataaagaaaaaccg 49118 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 49119 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 49178 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 49179 accaagcatcccccataggttctatacccgattcgtaactagaaagtttctcgggtcctt 49238 Query: 240 cactaaccggggctaaaa 257 |||| ||| ||||||| Sbjct: 49239 tgctaatcggtgctaaaa 49256
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 248 bits (125), Expect = 8e-63 Identities = 239/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51502 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51561 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51562 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51621 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51622 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51681 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51682 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51741 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 51742 taacactccggaaat--gaaaaatgccaaaatagga 51775
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 248 bits (125), Expect = 8e-63 Identities = 239/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 51366 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 51425 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51426 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51485 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51486 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51545 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51546 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51605 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 51606 taacactccggaaat--gaaaaatgccaaaatagga 51639
>gb|AY936336.1| Operculina aequisepala NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1721 Score = 244 bits (123), Expect = 1e-61 Identities = 232/267 (86%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacagatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 166 accaagcatcgcccataggttctatacctgattcataactagaaagtttctctggccctt 107 Query: 240 cactaaccggggctaaaagccctgaaa 266 |||| ||||||||||| ||| |||| Sbjct: 106 tgctaatcggggctaaaaccccggaaa 80
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 242 bits (122), Expect = 5e-61 Identities = 225/258 (87%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| || | | ||||||||||||||| ||||||| Sbjct: 54850 ctccttttcgccatgcataaactgaaccaacgattgggataagcacgaaaattaaagctt 54909 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| |||||||| ||||||||||| ||||| || || ||||| |||| Sbjct: 54910 ctataaatacggatacgcccaatacatcgaaactcatggcccatggataaagaaaaacgg 54969 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||| |||||||| ||||||||||||| Sbjct: 54970 tttcgacatcaaaaacaacaaaaactagggcaaacatgtaatagcggattcggaattgta 55029 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| |||||||||||||| | ||| |||||||||| Sbjct: 55030 tccaagcatcccccattggttctatacctgattcataactagagaccttttctggtcctt 55089 Query: 240 cactaaccggggctaaaa 257 ||||| ||||||||||| Sbjct: 55090 gactaatcggggctaaaa 55107
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 240 bits (121), Expect = 2e-60 Identities = 238/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52341 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52400 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52401 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52460 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52461 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52520 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52521 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52580 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| |||||||||||||||||| Sbjct: 52581 taacactccggaaat--taaaaatgccaaaatagga 52614
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 240 bits (121), Expect = 2e-60 Identities = 238/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52339 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52398 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52399 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52458 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52459 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52518 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52519 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52578 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| |||||||||||||||||| Sbjct: 52579 taacactccggaaat--taaaaatgccaaaatagga 52612
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 240 bits (121), Expect = 2e-60 Identities = 238/276 (86%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||||||||||||| |||||||| ||||| || || Sbjct: 52289 tgcataaactaaaccaataattaagataagcacgaaaatgaaagcttctataaatacaga 52348 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52349 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52408 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 52409 aacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 52468 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 52469 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 52528 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| |||||||||||||||||| Sbjct: 52529 taacactccggaaat--taaaaatgccaaaatagga 52562
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 234 bits (118), Expect = 1e-58 Identities = 248/289 (85%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| |||| |||||||||||| ||||| ||||||| Sbjct: 49533 ctccctttcgccatgcataaactaaaccaacaattaagataagcacaaaaattaaagctt 49592 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||| ||||| ||||||||||||||||| || || ||||| || | Sbjct: 49593 ctacaaatacagatacacctaatacatcgaaactcattgcccatggataaagaaaaaccg 49652 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 ||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct: 49653 tttccacatcaaaaacaacaaaaacaagagcaaacatataatagcggattctaaattgta 49712 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | || || ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 49713 accaagcgtcacctattggttctatacctgattcataactagaaagtttctccggtcctt 49772 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| ||||||||||| || ||||| ||||||| ||||||||||| Sbjct: 49773 tgctactcggggctaaaaatcccgaaat--gaaaaataccaaaatagga 49819
>gb|AY936344.1| Dinetus truncatus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1710 Score = 234 bits (118), Expect = 1e-58 Identities = 248/289 (85%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaatgaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| ||||||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacggatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| ||||||||||||||||| || || |||||||||||||| || |||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaacactagagcaaacatataataacggattctaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166 accaagcatcgcccatcggttctatacctgattcataactagaaagtttctctggcccct 107 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 |||| ||||||||||| || |||||| ||||| |||||||||||| Sbjct: 106 tgctaagcggggctaaaactccggaaatc--aaaaaagccaaaatagga 60
>gb|AY936340.1| Falkia repens NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1715 Score = 234 bits (118), Expect = 1e-58 Identities = 248/289 (85%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||| ||||||| ||||||||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 346 ctccctttcgccatgcataaactaaaccaccaattaagataagcacgaaaataaaagctt 287 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | | ||| || |||||||||||||| ||||||||||||||||| || || ||||| || | Sbjct: 286 ctagaaatacagatacacccaatacatcgaaactcattgcccatggataaagaaaaaccg 227 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 226 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 167 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 166 accaagcatcgcccattggttctatacctgattcataactagaaagtttctctggccctt 107 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| ||||||||||| ||| ||||| ||||| |||||||||||| Sbjct: 106 tgttaatcggggctaaaaccccggaaat--aaaaaaagccaaaatagga 60
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 234 bits (118), Expect = 1e-58 Identities = 248/289 (85%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||| ||||| | ||||||||||||||||||||| | ||||| Sbjct: 14158 ctccttttcgccatgcataaaccaaaccaagaactaagataagcacgaaaatgagagctt 14099 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| ||||||| |||||||||| |||||| || || ||||| | || Sbjct: 14098 ctataaatacggatacccccaatatatcgaaactcagtgcccatggataaagaaaaatgg 14039 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| | |||||||||||||| |||||||| ||||||| Sbjct: 14038 tttcaacatcaaaaacaacaaaaactaaagcaaacatataataacgtattcgaaattgta 13979 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 13978 accaagcatcgcccattggttctatacccgattcataactcgaaagtttctctggcccta 13919 Query: 240 cactaaccggggctaaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| |||||||||||| || ||||| || |||||||||||||||| Sbjct: 13918 tgctagtcggggctaaaagtccggaaattcg--aaatgccaaaatagga 13872
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 232 bits (117), Expect = 5e-58 Identities = 237/276 (85%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| | ||| || || Sbjct: 49925 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctacaaatacaga 49984 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 49985 tacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 50044 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || ||||||||||||||||| |||| ||||||| |||||| | || Sbjct: 50045 aacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaagcgtcgcc 50104 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||| || Sbjct: 50105 tattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcggagc 50164 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||| || ||||| ||||||| ||||||||||| Sbjct: 50165 taaaaatcccgaaat--gaaaaataccaaaatagga 50198
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 232 bits (117), Expect = 5e-58 Identities = 237/276 (85%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| |||||||||||||||||| |||||||| | ||| || || Sbjct: 49924 tgcataaactaaaccaacaattaagataagcacgaaaattaaagcttctacaaatacaga 49983 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||| ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 49984 tacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 50043 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || ||||||||||||||||| |||| ||||||| |||||| | || Sbjct: 50044 aacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaagcgtcgcc 50103 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || ||||||||||||||||||||||||||||| ||||| ||||||| |||| ||| || Sbjct: 50104 tattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcggagc 50163 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||| || ||||| ||||||| ||||||||||| Sbjct: 50164 taaaaatcccgaaat--gaaaaataccaaaatagga 50197
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 228 bits (115), Expect = 8e-57 Identities = 206/235 (87%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 52871 ctccttttcgccatgcataaactaaaccgacaattaggataagcacgaaaattaaagctt 52930 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| || ||||| || |||||||||||||| || || ||||| || | Sbjct: 52931 ctataaagacggatacccctaatacatcaaaactcattgcccacggataaagaaaaactg 52990 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 52991 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 53050 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctgg 234 ||||||| | ||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 53051 cccaagcatcgcccattggttctattcccgattcataactcgaaagtttctctgg 53105
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 228 bits (115), Expect = 8e-57 Identities = 206/235 (87%), Gaps = 1/235 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 52845 ctccttttcgccatgcataaactaaaccgacaattaggataagcacgaaaattaaagctt 52904 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | ||||| |||||||| || ||||| || |||||||||||||| || || ||||| || | Sbjct: 52905 ctataaagacggatacccctaatacatcaaaactcattgcccacggataaagaaaaactg 52964 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 52965 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 53024 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctgg 234 ||||||| | ||||| |||||||| |||||||||||||| ||||| |||||||| Sbjct: 53025 cccaagcatcgcccattggttctattcccgattcataactcgaaagtttctctgg 53079
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 226 bits (114), Expect = 3e-56 Identities = 223/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| |||||||||| |||| |||| || ||||||||||||||| ||||||| Sbjct: 53475 ctccttttcgccatgcataaactgaaccaacaattaggataagcacgaaaatgaaagctt 53534 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | || || |||| ||| |||||||| ||||||||||||||||| || || ||||| || | Sbjct: 53535 ctatgaatacgggtacccccaatacatcgaaactcattgcccatggataaagaaaaaccg 53594 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || ||||| ||||||| Sbjct: 53595 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattcgaaattgta 53654 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||| | ||||| ||||||||||||||||||||||||||||| || ||||| || | Sbjct: 53655 accaagcatcgcccattggttctatacccgattcataactagaaagtttttctggaccct 53714 Query: 240 cactaaccggggctaaaa 257 |||| ||||||||||| Sbjct: 53715 ttctaatcggggctaaaa 53732
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 224 bits (113), Expect = 1e-55 Identities = 236/276 (85%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||| ||||||||||| |||||||| ||||| || || Sbjct: 51975 tgcataaactaaaccaataattaagatcagcacgaaaatgaaagcttctataaatacaga 52034 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 |||||||||||||||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52035 tacacccaatacgtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 52094 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || |||| ||||||| |||||| | || Sbjct: 52095 aacaacaaaaactagagcaaacatataataacggattctaaattgtaaccaagcatcgcc 52154 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| ||||| Sbjct: 52155 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaattggggc 52214 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 52215 taacactccggaaat--gaaaaatgccaaaatagga 52248
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 224 bits (113), Expect = 1e-55 Identities = 212/245 (86%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 |||||||||| |||| |||| || |||||||||||| || |||||||| ||||| ||||| Sbjct: 11072 tgcataaactgaaccaacaattaggataagcacgaatatgaaagcttctataaatacgga 11013 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| || ||||| |||||||||||||||||||| || ||||| || ||||| |||||||| Sbjct: 11012 tacccctaatacatcgaaactcattgcccaaggataaagaaaaaccgtttcaacatcaaa 10953 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 ||||||||||| ||| |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 10952 aacaacaaaaatgagagcaaacatataataacggattcgaaattgtaaccaagcatcacc 10893 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 || |||||||| |||||||||||||||||||| ||||||||||| | |||| |||||| Sbjct: 10892 tattggttctattcccgattcataactagaaagtttctctggtcccttgctaatcggggc 10833 Query: 253 taaaa 257 ||||| Sbjct: 10832 taaaa 10828
>gb|U27653.1|LLU27653 Lupinus luteus NADH-plastoquinone oxidoreductase (ndhC) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 363 Score = 224 bits (113), Expect = 1e-55 Identities = 197/225 (87%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||||||||||||||||||||| ||||| ||||| Sbjct: 333 tgcataaactaaaccaacaattaggataagcacgaaaatcaaagcttctataaatacgga 274 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| ||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 273 tacccccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 214 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || |||| ||||||| |||||| | || Sbjct: 213 aacaacaaaaactagagcaaacatataataacggattctaaattgtaaccaagcatcgcc 154 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtcc 237 ||| |||||||| |||||||||||||| || || ||||||||||| Sbjct: 153 cattggttctattcccgattcataactcgagagtttctctggtcc 109
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 224 bits (113), Expect = 1e-55 Identities = 236/276 (85%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | || |||||||| ||||||||| |||||||| ||||| || || Sbjct: 51508 tgcataaactaaaccaataattaagataaccacgaaaatgaaagcttctataaatacaga 51567 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||||||||||| |||||||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 51568 tacacccaataggtcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaa 51627 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| | |||||||||||||| || ||||| ||||||| |||||| | || Sbjct: 51628 aacaacaaaaactacagcaaacatataataacggattcgaaattgtaaccaagcatcgcc 51687 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||||||||| |||||| ||||||| ||||| || |||| |||| |||||| Sbjct: 51688 cattggttctatacccgactcataagtagaaagtttctccggccctttgctaatcggggc 51747 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||| | || ||||| ||||||||||||||||||| Sbjct: 51748 taacactccggaaat--gaaaaatgccaaaatagga 51781
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 208 bits (105), Expect = 7e-51 Identities = 234/276 (84%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||| ||||| || |||||||| ||||| ||||| Sbjct: 113165 tgcataaactaaaccaacaattaggataaggacgaagatgaaagcttctataaatacgga 113224 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| || |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 113225 tacccccaatacatcaaaactcattgcccatgggtaaagaaagactgtttcaacatcaaa 113284 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||| | ||||||| |||||| | || Sbjct: 113285 aacaacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcc 113344 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||| || ||||||||||||||||| || ||||| |||| |||| || || Sbjct: 113345 catcggttctatcccagattcataactagaaagtttttctggcccttttctaattggagc 113404 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||| || |||||| | |||||||||||||||| Sbjct: 113405 taaaattccagaaatc--agaaatgccaaaatagga 113438
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 206 bits (104), Expect = 3e-50 Identities = 201/232 (86%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| | || || ||||||||||||||| ||||||| Sbjct: 49080 ctccttttcgccatgcataaactaaaccaagaattaggataagcacgaaaatgaaagctt 49139 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | |||||| ||||||| || | ||| ||||||||||||||||| || || ||||| |||| Sbjct: 49140 ctataaaagcggatacccctagtacatcgaaactcattgcccacggatacagaaaaacgg 49199 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 49200 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 49259 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctc 231 |||||| | || || ||||||||||| ||||||||||||||||| ||||| Sbjct: 49260 accaagcatccccgatcggttctatacctgattcataactagaaagtttctc 49311
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 198 bits (100), Expect = 7e-48 Identities = 200/232 (86%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| | || || ||||||||||||||| ||||||| Sbjct: 50018 ctccttttcgccatgcataaactaaaccaagaattaggataagcacgaaaatgaaagctt 50077 Query: 60 cgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacgg 119 | |||||| | ||||| |||| ||| ||||||||||||||||| || || ||||| || | Sbjct: 50078 ctataaaagcagatacccccagtacatcgaaactcattgcccacggatacagaaaaacag 50137 Query: 120 tttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||| |||||||||||||||||||| || |||||||||||||| || |||| ||||||| Sbjct: 50138 tttcaacatcaaaaacaacaaaaactagagcaaacatataataacggattctaaattgta 50197 Query: 180 cccaagcccctcccatgggttctatacccgattcataactagaaagcttctc 231 |||||| | || || ||||||||||| ||||||||||||||||| ||||| Sbjct: 50198 accaagcatccccgatcggttctatacctgattcataactagaaagtttctc 50249
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 196 bits (99), Expect = 3e-47 Identities = 192/223 (86%) Strand = Plus / Minus Query: 17 taaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacggataca 76 |||||| |||| |||| || ||||||||| || ||||||||||| ||||| ||||||| Sbjct: 11027 taaactgaaccaacaattaggataagcacaaagatcaaagcttctataaatacggatatc 10968 Query: 77 cccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaaaaca 136 |||||||| || |||||||||||||| || || ||||| || ||||| |||||||||||| Sbjct: 10967 cccaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaaaaaca 10908 Query: 137 acaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccatg 196 |||||||| || |||||||||||||| || ||| | ||||||| |||||| ||||||| Sbjct: 10907 acaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatctcccatt 10848 Query: 197 ggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 10847 ggttctattcccgattcataactagaaagtttctctggccctt 10805
>gb|M12704.1|MZECPPS2G Maize chloroplast psbG gene encoding PSII-G protein, complete cds Length = 1027 Score = 196 bits (99), Expect = 3e-47 Identities = 138/147 (93%), Gaps = 3/147 (2%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagctt 59 |||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 151 ctccttttcgccatgcataaactaaaccaacaactaggataagcacaaaaatgaaagctt 92 Query: 60 c-gataaaaacggatacacccaatacgtc-gaaactcattgcccaagggtatagaaagac 117 | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 91 ccgataaaaacggatacacccaatacgtcagaaactcattgcccaagggtagagaaagac 32 Query: 118 ggtttccacatcaaaaacaacaaaaac 144 |||||||||||||||||||||||||| Sbjct: 31 tgtttccacatcaaaaacaacaaaaac 5
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 192 bits (97), Expect = 4e-46 Identities = 232/276 (84%), Gaps = 2/276 (0%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| |||| || |||||| ||||| || |||||||| ||||| ||||| Sbjct: 83488 tgcataaactaaaccaacaattaggataaggacgaagatgaaagcttctataaatacgga 83429 Query: 73 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 132 ||| |||||||| || |||||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 83428 tacccccaatacatcaaaactcattgcccatgggtaaagaaagactgtttcaacatcaaa 83369 Query: 133 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 192 |||||||||||| || |||||||||||||| || ||| | ||||||| |||||| | || Sbjct: 83368 aacaacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcc 83309 Query: 193 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 252 ||| |||||||| | ||||||||||| ||||| || ||||| |||| |||| || || Sbjct: 83308 catcggttctatcctagattcataacttgaaagtttttctggcccttttctaattggagc 83249 Query: 253 taaaagccctgaaatccgaaaaatgccaaaatagga 288 ||||| || |||||| |||| ||||||||||||| Sbjct: 83248 taaaattccagaaatcagaaa--tgccaaaatagga 83215
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35298991 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35298932 Query: 256 aa 257 || Sbjct: 35298931 aa 35298930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35389063 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35389004 Query: 256 aa 257 || Sbjct: 35389003 aa 35389002
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 107 bits (54), Expect = 2e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 69463 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 69522 Query: 256 aa 257 || Sbjct: 69523 aa 69524
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 101 bits (51), Expect = 1e-18 Identities = 126/151 (83%) Strand = Plus / Minus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || |||| ||| || ||||| |||||||||| ||||||||| | | Sbjct: 29693 aaactcatggcccatggatataaaaaaactgtttctacatcaaaaataacaaaaactaac 29634 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 || |||||||||||||| ||| ||||||| | |||||| | ||||| |||||||| || Sbjct: 29633 gcgaacatataatagcgaatttggaattgaatccaagcatcacccattggttctattcct 29574 Query: 209 gattcataactagaaagcttctctggtcctt 239 ||||||||||||| || || |||||||||| Sbjct: 29573 gattcataactagttagtttttctggtcctt 29543 Score = 40.1 bits (20), Expect = 3.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 1 ctccttttcgcc-tgcataaactaaacc 27 |||||||||||| ||||||||||||||| Sbjct: 29782 ctccttttcgccatgcataaactaaacc 29755
>dbj|AB087446.1| Anthoceros formosae chloroplast ndhK, ndhC mRNA for NADH dehydrogenase 27 kDa subunit, NADH dehydrogenase ND3 subunit, partial and complete cds Length = 443 Score = 89.7 bits (45), Expect = 5e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||||| || ||||| |||||||||| ||| ||||| | Sbjct: 185 aaactcatagcccatggatagagaaaaacagtttcaacatcaaaaataacgaaaactaaa 244 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| | ||||| | |||||| ||||||| ||||||||||| Sbjct: 245 gcaaacatataataacgaatttgaaattgaatccaagcatctcccataggttctatacca 304 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 305 cattcataactagtaaatttttctggtcctttactaa 341
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 85.7 bits (43), Expect = 7e-14 Identities = 109/131 (83%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| |||||||| || ||||| || ||||| |||||||||| |||||||| | Sbjct: 52621 aaactcatagcccaaggataaagaaaaactgtttctacatcaaaaattacaaaaactaaa 52680 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| | ||||| | ||||| ||||||| ||||||||||| Sbjct: 52681 gcaaacatataatatcgaatttgaaattgaatacaagcttctcccatcggttctatacct 52740 Query: 209 gattcataact 219 ||||||||||| Sbjct: 52741 gattcataact 52751
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 85.7 bits (43), Expect = 7e-14 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand = Plus / Minus Query: 223 aagcttctctggtccttcactaaccggggctaaaagccctgaaatccgaaaaatgccaaa 282 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 3819 aagcttctctggtccttcactaaccggggctaaaatgcctgaaatc--gaaaatgccaaa 3762 Query: 283 atagga 288 |||||| Sbjct: 3761 atagga 3756
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 83.8 bits (42), Expect = 3e-13 Identities = 126/153 (82%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 136 aacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccat 195 ||||||||| || |||||||||||||| || ||| | ||||||| |||||| | ||||| Sbjct: 101182 aacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcccat 101123 Query: 196 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 255 |||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||| Sbjct: 101122 cggttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaa 101063 Query: 256 aagccctgaaatccgaaaaatgccaaaatagga 288 || || |||||| | |||||||||||||||| Sbjct: 101062 aattccagaaatc--agaaatgccaaaatagga 101032
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 73.8 bits (37), Expect = 3e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 68028 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 68087 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 68088 gcaaacatataataacgaatttaaaattggatccaagcatctcccataggttctatacca 68147 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 68148 cattcataactagtaaatttttctggtcctttactaa 68184
>dbj|D43695.1|APNCPRBCLA Anthoceros formosae chloroplast DNA for ndhK, atpB, accD, partial cds, and ndhC, atpE, rbcL, complete cds Length = 7556 Score = 73.8 bits (37), Expect = 3e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 89 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 148 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 339 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 398 Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 399 gcaaacatataataacgaatttaaaattgaatccaagcatctcccataggttctatacca 458 Query: 209 gattcataactagaaagcttctctggtccttcactaa 245 |||||||||||| || || |||||||||| ||||| Sbjct: 459 cattcataactagtaaatttttctggtcctttactaa 495
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 67.9 bits (34), Expect = 2e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 92 ctcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgca 151 ||||| ||||| ||||| || || || ||||| || ||||| |||||||| || | ||| Sbjct: 108886 ctcatagcccatgggtaaaggaatacagtttctacgtcaaatacaacaaacactaaggca 108945 Query: 152 aacatataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgat 211 ||||||||||| || ||| ||||||||| ||||| | ||||| ||||||||||| || Sbjct: 108946 aacatataataacgaatttggaattgtatccaagattcgcccataggttctatacctgac 109005 Query: 212 tcataactag 221 |||||||||| Sbjct: 109006 tcataactag 109015
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 65.9 bits (33), Expect = 7e-08 Identities = 208/265 (78%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 5 ttttcgcc-tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgat 63 |||||||| ||||||||||||||| | || || |||| |||||| || | |||||| || Sbjct: 51811 ttttcgccatgcataaactaaaccaataattagaataaacacgaatattagagcttcaat 51870 Query: 64 aaaaacggatacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttc 123 |||| || ||| ||| ||| | | |||||||| ||||| || || ||||| || ||||| Sbjct: 51871 aaaagcgaatatacctaattcataaaaactcatagcccatggataaagaaaaaccgtttc 51930 Query: 124 cacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtaccca 183 |||||||||| ||| ||||| | ||||| |||| || || || | ||||||| ||| Sbjct: 51931 aacatcaaaaataacgaaaactaaagcaaagctatagtaacggatctgaaattgtatcca 51990 Query: 184 agcccctcccatgggttctatacccgattcataactagaaagcttctctggtccttcact 243 ||| | ||||| ||||||||||| ||||||||||| | | || || ||||| | ||| Sbjct: 51991 agcatcccccattggttctatacctgattcataactggtcattttttcaggtcccttact 52050 Query: 244 aaccggggctaaaagccctgaaatc 268 |||||| |||||||| | ||||||| Sbjct: 52051 aaccggtgctaaaagtcgtgaaatc 52075
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 63.9 bits (32), Expect = 3e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 |||||| || || ||||| || ||||| |||||||||| ||| ||||| || |||||||| Sbjct: 316694 tgcccatggataaagaaatactgtttcaacatcaaaaataacgaaaactagggcaaacat 316753 Query: 157 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 216 |||||||| || ||||| | |||||||||||| |||||||| || || |||||||| Sbjct: 316754 gtaatagcgaatattaaattgaatccaagcccctccaatgggttccatcccagattcata 316813
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 149 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 208 |||||||||||||| || || ||||||| | |||||| |||| |||||||||||||| Sbjct: 37855 gcaaacatataataacgaatctggaattggatccaagcgtctccaatgggttctatacct 37796 Query: 209 gattcataactagaaagcttctctggtcctt 239 |||||||| || | || ||| |||||||||| Sbjct: 37795 gattcatagcttgtaaacttttctggtcctt 37765
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 139 aaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccatggg 198 |||||| || |||||||| ||||||| |||||||||| ||||||||| | ||||| || Sbjct: 51110 aaaaactagagcaaacatttaatagcaaattcggaattttacccaagcatcccccattgg 51169 Query: 199 ttctatacccgattcataactag 221 ||| |||| ||||||||||||| Sbjct: 51170 ctctctacctgattcataactag 51192
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 54.0 bits (27), Expect = 3e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 119 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 178 ||||| |||||||||| |||||||| | |||||||||||||| || ||| |||| ||| Sbjct: 37563 gtttctacatcaaaaatcacaaaaactaaagcaaacatataataacgaatttggaactgt 37622 Query: 179 acccaagcccctcccatgggttctatacccgattcataa 217 | ||||| ||||||| ||||| || || ||||||||| Sbjct: 37623 atccaagattctcccattggttcaattcctgattcataa 37661
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||||||| | ||||| |||||||| |||||||| || || |||||||| Sbjct: 59941 tgcccaaggatatagaaacaaagtttcgacatcaaatacaacaaatactagtgcaaacat 60000 Query: 157 ata 159 ||| Sbjct: 60001 ata 60003
>dbj|D14589.1| Eustoma russellianum mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 2174 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 197 ggttctatacccgattcataactagaaagcttctctggtcctt 239 |||||||| ||||||||||||||||| || || |||||||||| Sbjct: 2130 ggttctatccccgattcataactagacagtttttctggtcctt 2088
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 48.1 bits (24), Expect = 0.015 Identities = 75/91 (82%), Gaps = 2/91 (2%) Strand = Plus / Minus Query: 198 gttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaaaa 257 ||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||||| Sbjct: 114622 gttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaaaa 114563 Query: 258 gccctgaaatccgaaaaatgccaaaatagga 288 || |||||| | |||||||||||||||| Sbjct: 114562 ttccagaaatc--agaaatgccaaaatagga 114534
>gb|BT011769.1| Arabidopsis thaliana At1g45904 mRNA, complete cds Length = 728 Score = 46.1 bits (23), Expect = 0.061 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | | || ||||||||| ||||| |||||||| ||||| ||| Sbjct: 290 tgcataaactaaaccaaggattaggataagcacaaaaatgaaagcttctgtaaaagtgga 231 Query: 73 tacacccaatacgtcgaaactca 95 ||| |||||||| || ||||||| Sbjct: 230 tac-cccaatacatctaaactca 209
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 46.1 bits (23), Expect = 0.061 Identities = 80/99 (80%) Strand = Plus / Plus Query: 119 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 178 ||||| |||||||||| ||||||| | |||||||||||||| ||||| |||||| Sbjct: 58063 gtttctacatcaaaaattacaaaaattaaagcaaacatataataacgtatgttgaattgg 58122 Query: 179 acccaagcccctcccatgggttctatacccgattcataa 217 |||||||| | ||||| ||||| || || ||||||||| Sbjct: 58123 acccaagcttcacccattggttcaattcctgattcataa 58161
>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete sequence Length = 133379 Score = 46.1 bits (23), Expect = 0.061 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 72 ||||||||||||||| | | || ||||||||| ||||| |||||||| ||||| ||| Sbjct: 30551 tgcataaactaaaccaaggattaggataagcacaaaaatgaaagcttctgtaaaagtgga 30610 Query: 73 tacacccaatacgtcgaaactca 95 ||| |||||||| || ||||||| Sbjct: 30611 tac-cccaatacatctaaactca 30632
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 46.1 bits (23), Expect = 0.061 Identities = 47/55 (85%) Strand = Plus / Minus Query: 125 acatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 179 |||||||||| |||||||| || |||||||||||||| || ||| | ||||||| Sbjct: 58525 acatcaaaaataacaaaaaatagagcaaacatataataacggatttgaaattgta 58471
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 443617 tagcgtattcggaattgtaaccaagc 443642 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 362504 tagcgtattcggaattgtaaccaagc 362529 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 443543 aaacggaaacgcccaatacatcgaaactcattaccca 443579 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 362430 aaacggaaacgcccaatacatcgaaactcattaccca 362466
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442775 tagcgtattcggaattgtaaccaagc 442800 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361677 tagcgtattcggaattgtaaccaagc 361702 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442701 aaacggaaacgcccaatacatcgaaactcattaccca 442737 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361603 aaacggaaacgcccaatacatcgaaactcattaccca 361639
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442771 tagcgtattcggaattgtaaccaagc 442796 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361673 tagcgtattcggaattgtaaccaagc 361698 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442697 aaacggaaacgcccaatacatcgaaactcattaccca 442733 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361599 aaacggaaacgcccaatacatcgaaactcattaccca 361635
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.24 Identities = 46/54 (85%) Strand = Plus / Minus Query: 112 aaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 |||||| || ||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 1491650 aaagaccgtctccacatcaaaaatgacaaagacgagggcaaacatgtagtagcg 1491597
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 44.1 bits (22), Expect = 0.24 Identities = 34/38 (89%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacgagcgcaaacatataata 162 |||||||||| ||||||||| | |||||||||||||| Sbjct: 47135 acatcaaaaataacaaaaactaaagcaaacatataata 47172
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 442628 tagcgtattcggaattgtaaccaagc 442653 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 161 tagcgtattcggaattgtacccaagc 186 ||||||||||||||||||| |||||| Sbjct: 361541 tagcgtattcggaattgtaaccaagc 361566 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442554 aaacggaaacgcccaatacatcgaaactcattaccca 442590 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361467 aaacggaaacgcccaatacatcgaaactcattaccca 361503
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 0.95 Identities = 57/69 (82%) Strand = Plus / Minus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 2312630 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 2312571 Query: 157 ataatagcg 165 ||| ||||| Sbjct: 2312570 atagtagcg 2312562
>gb|AY120853.2| Synechococcus sp. PCC 7942 processing protease-like protein gene, partial cds; phycocyanobilin:ferredoxin oxidoreductase-like protein, DevB (devB), DevC (devC), tRNA pseudoridine 55 synthase, CheY (cheY), 50S ribosomal protein L27, 50S ribosomal protein L21, KaiA (kaiA), KaiB (kaiB), KaiC (kaiC), glutathione peroxidase, virulence associated protein C, rRNA methylase-like protein, PhdD (phdD), indole-3-glycerol phosphate synthase-like protein, PdxJ (pdxJ), KguA (kguA), AmpA (ampA), MobA (mobA), transferrin variant A-like protein, 6-pyruvoyl-tetrahydropterin synthase-like protein, NugC (nugC), NdhK (ndhK), Nu3C (nu3C), RubR (rubR), PsbE (psbE), PsbF (psbF), PsbL (psbL), PsbJ (psbJ), apolipoprotein N-acyltransferase-like protein, unknown protein, IspF (ispF), Ap-4-A phosphorylase II-like protein, PanC (panC), Kcy (kcy), and dTDP-glucose 4-6-dehydratase-like protein genes, complete cds; and unknown genes Length = 74355 Score = 42.1 bits (21), Expect = 0.95 Identities = 45/53 (84%) Strand = Plus / Plus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 35711 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 35763
>emb|AJ012181.1|AVA012181 Anabaena variabilis hoxR gene and ndhCKJ gene cluster Length = 3020 Score = 42.1 bits (21), Expect = 0.95 Identities = 57/69 (82%) Strand = Plus / Minus Query: 97 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 156 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 1347 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 1288 Query: 157 ataatagcg 165 ||| ||||| Sbjct: 1287 atagtagcg 1279
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 0.95 Identities = 45/53 (84%) Strand = Plus / Plus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 408832 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 408884
>gb|BC068355.1| Danio rerio zgc:85677, mRNA (cDNA clone MGC:85677 IMAGE:6961081), complete cds Length = 2201 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaac 144 ||||||||||||||||||||| Sbjct: 1550 cacatcaaaaacaacaaaaac 1530
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414380 acatcaaaaacaacaaaaacg 5414400 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414354 acatcaaaaacaacaaaaacg 5414374 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaacg 145 ||||||||||||||||||||| Sbjct: 5414328 acatcaaaaacaacaaaaacg 5414348 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 catcaaaaacaacaaaaacg 145 |||||||||||||||||||| Sbjct: 5414580 catcaaaaacaacaaaaacg 5414599
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 78261 aaacggaaacgcccaatacatcgaaactcattaccca 78297
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tttccacatcaaaaacaacaa 140 ||||||||||||||||||||| Sbjct: 4865735 tttccacatcaaaaacaacaa 4865755
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 0.95 Identities = 45/53 (84%) Strand = Plus / Minus Query: 113 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 165 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 1211974 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 1211922
>dbj|D13112.1|RICMT16 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNAs, complete sequences Length = 4894 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 aaacggatacacccaatacgtcgaaactcattgccca 102 ||||||| || |||||||| |||||||||||| |||| Sbjct: 4758 aaacggaaacgcccaatacatcgaaactcattaccca 4794
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 101322 tgggttctatacccgattca 101341
>gb|DQ205647.1| Eimeria tenella calmodulin-like domain protein kinase isoform 2 mRNA, complete cds Length = 2187 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cttcgataaaaacggataca 76 |||||||||||||||||||| Sbjct: 1710 cttcgataaaaacggataca 1729
>gb|AC140351.2| Mus musculus BAC clone RP24-258E8 from chromosome 8, complete sequence Length = 167073 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaac 144 |||||||||||||||||||| Sbjct: 150873 acatcaaaaacaacaaaaac 150892
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 356188 tgggttctatacccgattca 356169
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 139487 tgggttctatacccgattca 139506
>gb|BT012390.1| Arabidopsis thaliana At1g45904 mRNA, complete cds Length = 162 Score = 40.1 bits (20), Expect = 3.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 13 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttc 60 ||||||||||||||| | | || ||||||||| ||||| |||||||| Sbjct: 73 tgcataaactaaaccaaggattaggataagcacaaaaatgaaagcttc 26
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 394098 tgggttctatacccgattca 394117
>gb|AF511566.1| Pennisetum glaucum mitochondrial gene sequence Length = 927 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 87 tgggttctatacccgattca 106
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence Length = 198470 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 16919 cacatcaaaaacaacaaaaa 16900
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaac 144 |||||||||||||||||||| Sbjct: 65777 acatcaaaaacaacaaaaac 65796
>gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ttgtacccaagcccctcccatggg 198 |||| ||||||||||||||||||| Sbjct: 114434 ttgttcccaagcccctcccatggg 114457
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence Length = 226696 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 63811 cacatcaaaaacaacaaaaa 63830
>gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence Length = 219434 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 acatcaaaaacaacaaaaac 144 |||||||||||||||||||| Sbjct: 129047 acatcaaaaacaacaaaaac 129066
>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence Length = 200420 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 184483 cacatcaaaaacaacaaaaa 184464
>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence Length = 158617 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 78226 cacatcaaaaacaacaaaaa 78207
>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence Length = 166978 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 15895 cacatcaaaaacaacaaaaa 15876
>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15 Length = 83689 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 atacccgattcataactaga 222 |||||||||||||||||||| Sbjct: 60785 atacccgattcataactaga 60766
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 212508 tgggttctatacccgattca 212489
>emb|X69720.1|MITANAD9 T.aestivum mitochondrial nad9 gene for 30 kDa subunit of complex I NADH dehydrogenase Length = 935 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tgggttctatacccgattca 214 |||||||||||||||||||| Sbjct: 87 tgggttctatacccgattca 106
>gb|AC092956.5| Homo sapiens 3 BAC RP11-648O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194510 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cacatcaaaaacaacaaaaa 143 |||||||||||||||||||| Sbjct: 176269 cacatcaaaaacaacaaaaa 176288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,598,348 Number of Sequences: 3902068 Number of extensions: 2598348 Number of successful extensions: 68624 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 68061 Number of HSP's gapped (non-prelim): 522 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
