ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27k18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474686.1| Oryza sativa (japonica cultivar-group), predic... 210 1e-51
2dbj|AK063110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 1e-51
3gb|AY109886.1| Zea mays CL29119_1 mRNA sequence 161 1e-36
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 119 4e-24
5emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 119 4e-24
6gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 56 5e-05
7gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 54 2e-04
8dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 50 0.003
9gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 44 0.20
10emb|CR723954.2|CNS0GLJS Tetraodon nigroviridis full-length cDNA 44 0.20
11gb|AE009452.1| Brucella melitensis 16M chromosome I, section 9 o... 44 0.20
12gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 44 0.20
13emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 44 0.20
14gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 0.78
15gb|AF106583.1| Caenorhabditis elegans cosmid F23C8, complete seq... 40 3.1
16gb|BC079351.1| Rattus norvegicus electron-transfer-flavoprotein,... 40 3.1
17gb|BC031596.1| Homo sapiens ring finger protein 10, mRNA (cDNA c... 40 3.1
18gb|BC016622.1| Homo sapiens ring finger protein 10, mRNA (cDNA c... 40 3.1
19ref|NM_026695.2| Mus musculus electron transferring flavoprotein... 40 3.1
20ref|XM_909897.2| PREDICTED: Mus musculus similar to Electron tra... 40 3.1
21ref|XM_001003118.1| PREDICTED: Mus musculus electron transferrin... 40 3.1
22emb|AJ578713.1|EGU578713 Elaeis guineensis microsatellite DNA, c... 40 3.1
23ref|XM_965164.1| PREDICTED: Tribolium castaneum similar to CG783... 40 3.1
24gb|BC005418.1| Mus musculus RAS protein activator like 1 (GAP1 l... 40 3.1
25dbj|AK126274.1| Homo sapiens cDNA FLJ44288 fis, clone TRACH20088... 40 3.1
26dbj|AK156050.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 3.1
27dbj|AK150293.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 3.1
28ref|NM_014868.3| Homo sapiens ring finger protein 10 (RNF10), mRNA 40 3.1
29gb|BC049237.1| Mus musculus electron transferring flavoprotein, ... 40 3.1
30dbj|AK013284.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 3.1
31dbj|AK002407.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 3.1
32ref|NM_058572.4| Caenorhabditis elegans F23C8.5 (F23C8.5) mRNA, ... 40 3.1
33gb|AY030357.1| Hydra vulgaris electron transfer flavoprotein bet... 40 3.1
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
35ref|NM_001004220.1| Rattus norvegicus electron-transfer-flavopro... 40 3.1
36gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.1
37gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Can... 40 3.1
38dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 3.1
39dbj|AK066943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.1
40gb|BC069877.1| Mus musculus electron transferring flavoprotein, ... 40 3.1
41gb|AF086714.1|AF086714 Mus musculus rasGAP-activating-like prote... 40 3.1
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
43emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126... 40 3.1
44ref|NM_013832.2| Mus musculus RAS protein activator like 1 (GAP1... 40 3.1
45dbj|AB027196.1| Homo sapiens mRNA for RIE2 sid2705, complete cds 40 3.1 
>ref|XM_474686.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score =  210 bits (106), Expect = 1e-51
 Identities = 139/150 (92%)
 Strand = Plus / Minus

                                                                       
Query: 91  acctttgaggcgaaggttccctgaggccagttgagcaatgcagctagcattcgtcctgtt 150
           ||||||||||| |||||||| || ||||| || |||||  ||||||||||| ||||||||
Sbjct: 449 acctttgaggcaaaggttccttgtggccaattaagcaacccagctagcatttgtcctgtt 390

                                                                       
Query: 151 tggctgcaatcatcatcaattgcctgcttgccgaggatgaggaggccggggctctcctgg 210
           ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 389 tggttgcaatcatcatcaattgcctgcttgccgaggatgacgaggccggggttctcctgg 330

                                         
Query: 211 agcgcgagggcgcggaggatcttggcgacg 240
           ||||||||||||||||||||||||||||||
Sbjct: 329 agcgcgagggcgcggaggatcttggcgacg 300
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>dbj|AK063110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D06, full
           insert sequence
          Length = 951

 Score =  210 bits (106), Expect = 1e-51
 Identities = 139/150 (92%)
 Strand = Plus / Minus

                                                                       
Query: 91  acctttgaggcgaaggttccctgaggccagttgagcaatgcagctagcattcgtcctgtt 150
           ||||||||||| |||||||| || ||||| || |||||  ||||||||||| ||||||||
Sbjct: 536 acctttgaggcaaaggttccttgtggccaattaagcaacccagctagcatttgtcctgtt 477

                                                                       
Query: 151 tggctgcaatcatcatcaattgcctgcttgccgaggatgaggaggccggggctctcctgg 210
           ||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 476 tggttgcaatcatcatcaattgcctgcttgccgaggatgacgaggccggggttctcctgg 417

                                         
Query: 211 agcgcgagggcgcggaggatcttggcgacg 240
           ||||||||||||||||||||||||||||||
Sbjct: 416 agcgcgagggcgcggaggatcttggcgacg 387
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>gb|AY109886.1| Zea mays CL29119_1 mRNA sequence
          Length = 937

 Score =  161 bits (81), Expect = 1e-36
 Identities = 126/141 (89%)
 Strand = Plus / Minus

                                                                       
Query: 91  acctttgaggcgaaggttccctgaggccagttgagcaatgcagctagcattcgtcctgtt 150
           ||||| ||||| |||||||| || ||||| ||||||||| |||||| |||| |||| |||
Sbjct: 450 accttggaggcaaaggttccttgtggccacttgagcaatccagctaacatttgtccagtt 391

                                                                       
Query: 151 tggctgcaatcatcatcaattgcctgcttgccgaggatgaggaggccggggctctcctgg 210
           ||| |||||||||||||||||||||||||||||||||||| |||||||||  ||||||||
Sbjct: 390 tggttgcaatcatcatcaattgcctgcttgccgaggatgacgaggccgggcttctcctgg 331

                                
Query: 211 agcgcgagggcgcggaggatc 231
           ||||||| |||||| ||||||
Sbjct: 330 agcgcgacggcgcgaaggatc 310



 Score = 46.1 bits (23), Expect = 0.050
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcactgctggtaaatccaagcagattgnctcagttccaccatcgacctctcgctcaaca 60
           ||||||||||| | ||| | |||||| |  ||| |||||||||| || ||||||||||||
Sbjct: 540 atcactgctggcagatcaaggcagatggtttcaattccaccatcaacttctcgctcaaca 481

             
Query: 61  gt 62
           ||
Sbjct: 480 gt 479
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  119 bits (60), Expect = 4e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                           
Query: 173     cctgcttgccgaggatgaggaggccggggctctcctggagcgcgagggcgcggaggatct 232
               |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5604874 cctgcttgccgaggatgacgaggccggggttctcctggagcgcgagggcgcggaggatct 5604933

                       
Query: 233     tggcgacg 240
               ||||||||
Sbjct: 5604934 tggcgacg 5604941



 Score =  103 bits (52), Expect = 2e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                           
Query: 90      cacctttgaggcgaaggttccctgaggccagttgagcaatgcagctagcattcgtcctgt 149
               |||||||||||| |||||||| || ||||| || |||||  ||||||||||| |||||||
Sbjct: 5603295 cacctttgaggcaaaggttccttgtggccaattaagcaacccagctagcatttgtcctgt 5603354

                                           
Query: 150     ttggctgcaatcatcatcaattgcctgc 177
               |||| |||||||||||||||||||||||
Sbjct: 5603355 ttggttgcaatcatcatcaattgcctgc 5603382



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 35      ttccaccatcgacctctcgctcaacagtagcttttt 70
               |||| ||||||||||||| ||| |||||||| ||||
Sbjct: 5602136 ttccgccatcgacctctctctccacagtagcctttt 5602171
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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score =  119 bits (60), Expect = 4e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                         
Query: 173   cctgcttgccgaggatgaggaggccggggctctcctggagcgcgagggcgcggaggatct 232
             |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 62081 cctgcttgccgaggatgacgaggccggggttctcctggagcgcgagggcgcggaggatct 62140

                     
Query: 233   tggcgacg 240
             ||||||||
Sbjct: 62141 tggcgacg 62148



 Score =  103 bits (52), Expect = 2e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                         
Query: 90    cacctttgaggcgaaggttccctgaggccagttgagcaatgcagctagcattcgtcctgt 149
             |||||||||||| |||||||| || ||||| || |||||  ||||||||||| |||||||
Sbjct: 60502 cacctttgaggcaaaggttccttgtggccaattaagcaacccagctagcatttgtcctgt 60561

                                         
Query: 150   ttggctgcaatcatcatcaattgcctgc 177
             |||| |||||||||||||||||||||||
Sbjct: 60562 ttggttgcaatcatcatcaattgcctgc 60589



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 35    ttccaccatcgacctctcgctcaacagtagcttttt 70
             |||| ||||||||||||| ||| |||||||| ||||
Sbjct: 59343 ttccgccatcgacctctctctccacagtagcctttt 59378
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 138     cattcgtcctgtttggctgcaatcatcatcaattgc 173
               |||| ||||||||||| |||||||||||||||||||
Sbjct: 1193132 catttgtcctgtttggttgcaatcatcatcaattgc 1193167
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                           
Query: 130     gcagctagcattcgtcctgtttggctgcaatcatcatcaattgcctgcttgccgaggatg 189
               ||||| |||||| | || || ||| |||| ||||| ||||| ||||||||||| ||||||
Sbjct: 4636940 gcagcgagcatttggccggtctggttgcagtcatcgtcaatggcctgcttgcccaggatg 4636999

                          
Query: 190     aggaggccggg 200
               | |||||||||
Sbjct: 4637000 atgaggccggg 4637010
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 172     gcctgcttgccgaggatgaggaggccggg 200
               ||||||||||||||||||| |||||||||
Sbjct: 2812019 gcctgcttgccgaggatgacgaggccggg 2811991
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 158     aatcatcatcaattgcctgcttgccgagga 187
               |||| |||||||| ||||||||||||||||
Sbjct: 1901235 aatcgtcatcaatcgcctgcttgccgagga 1901264
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>emb|CR723954.2|CNS0GLJS Tetraodon nigroviridis full-length cDNA
          Length = 1307

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 145 cctgtttggctgcaatcatcatcaattgcctgcttgccgaggatga 190
           |||||||| ||||| |||||||| || || || |||||||||||||
Sbjct: 421 cctgtttgactgcagtcatcatcgatggcttgtttgccgaggatga 376
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>gb|AE009452.1| Brucella melitensis 16M chromosome I, section 9 of 195 of the
            complete sequence
          Length = 11349

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 158  aatcatcatcaattgcctgcttgccgagga 187
            |||| |||||||| ||||||||||||||||
Sbjct: 9805 aatcgtcatcaatcgcctgcttgccgagga 9776
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 158     aatcatcatcaattgcctgcttgccgagga 187
               |||| |||||||| ||||||||||||||||
Sbjct: 1917955 aatcgtcatcaatcgcctgcttgccgagga 1917984
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 158     aatcatcatcaattgcctgcttgccgagga 187
               |||| |||||||| ||||||||||||||||
Sbjct: 1915077 aatcgtcatcaatcgcctgcttgccgagga 1915106
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 0.78
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 158    aatcatcatcaattgcctgcttgccgaggatga 190
              |||| |||||||| |||||||||||||| ||||
Sbjct: 838891 aatcgtcatcaatggcctgcttgccgagaatga 838859
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>gb|AF106583.1| Caenorhabditis elegans cosmid F23C8, complete sequence
          Length = 38419

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 158  aatcatcatcaattgcctgcttgccgag 185
            |||||||||| ||||||||||| |||||
Sbjct: 5619 aatcatcatcgattgcctgctttccgag 5646
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>gb|BC079351.1| Rattus norvegicus electron-transfer-flavoprotein, beta polypeptide,
           mRNA (cDNA clone MGC:94808 IMAGE:7108112), complete cds
          Length = 867

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 419 tcatcatcaatagcctgcttgcccagga 392
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>gb|BC031596.1| Homo sapiens ring finger protein 10, mRNA (cDNA clone MGC:35311
           IMAGE:5177665), complete cds
          Length = 3129

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ccgaggatgaggaggccggggctc 204
           ||||||| ||||||||||||||||
Sbjct: 243 ccgaggacgaggaggccggggctc 220
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>gb|BC016622.1| Homo sapiens ring finger protein 10, mRNA (cDNA clone MGC:17738
           IMAGE:3874214), complete cds
          Length = 3121

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ccgaggatgaggaggccggggctc 204
           ||||||| ||||||||||||||||
Sbjct: 243 ccgaggacgaggaggccggggctc 220
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>ref|NM_026695.2| Mus musculus electron transferring flavoprotein, beta polypeptide
           (Etfb), mRNA
          Length = 835

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 394 tcatcatcaatagcctgcttgcccagga 367
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>ref|XM_909897.2| PREDICTED: Mus musculus similar to Electron transfer flavoprotein
           beta-subunit (Beta-ETF) (LOC634990), mRNA
          Length = 456

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 392 tcatcatcaatagcctgcttgcccagga 365
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>ref|XM_001003118.1| PREDICTED: Mus musculus electron transferring flavoprotein, beta
           polypeptide (Etfb), mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 377 tcatcatcaatagcctgcttgcccagga 350
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>emb|AJ578713.1|EGU578713 Elaeis guineensis microsatellite DNA, clone mEgCIR3722
          Length = 483

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 58 acagtagctttttgcttatc 77
          ||||||||||||||||||||
Sbjct: 26 acagtagctttttgcttatc 45
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>ref|XM_965164.1| PREDICTED: Tribolium castaneum similar to CG7834-PA, isoform A
           (LOC658807), mRNA
          Length = 830

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 tcatcaattgcctgcttgcc 182
           ||||||||||||||||||||
Sbjct: 448 tcatcaattgcctgcttgcc 429
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>gb|BC005418.1| Mus musculus RAS protein activator like 1 (GAP1 like), mRNA (cDNA
            clone MGC:5710 IMAGE:3488024), complete cds
          Length = 3249

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  cgaggatgaggaggccgggg 201
            ||||||||||||||||||||
Sbjct: 1911 cgaggatgaggaggccgggg 1930
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>dbj|AK126274.1| Homo sapiens cDNA FLJ44288 fis, clone TRACH2008820, highly  similar
           to Homo sapiens mRNA for RIE2 sid2705
          Length = 2957

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ccgaggatgaggaggccggggctc 204
           ||||||| ||||||||||||||||
Sbjct: 124 ccgaggacgaggaggccggggctc 101
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>dbj|AK156050.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830005P17 product:RAS protein activator
            like 1 (GAP1 like), full insert sequence
          Length = 3209

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  cgaggatgaggaggccgggg 201
            ||||||||||||||||||||
Sbjct: 1885 cgaggatgaggaggccgggg 1904
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>dbj|AK150293.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830001L18 product:electron
           transferring flavoprotein, beta polypeptide, full insert
           sequence
          Length = 826

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 408 tcatcatcaatagcctgcttgcccagga 381
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>ref|NM_014868.3| Homo sapiens ring finger protein 10 (RNF10), mRNA
          Length = 3784

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ccgaggatgaggaggccggggctc 204
           ||||||| ||||||||||||||||
Sbjct: 256 ccgaggacgaggaggccggggctc 233
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>gb|BC049237.1| Mus musculus electron transferring flavoprotein, beta polypeptide,
           mRNA (cDNA clone MGC:54845 IMAGE:4241552), complete cds
          Length = 835

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 394 tcatcatcaatagcctgcttgcccagga 367
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>dbj|AK013284.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810441H06 product:ELECTRON
           TRANSFER FLAVOPROTEIN BETA-SUBUNIT (BETA-ETF) homolog
           [Homo sapiens], full insert sequence
          Length = 853

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 429 tcatcatcaatagcctgcttgcccagga 402
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>dbj|AK002407.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610009I16 product:ELECTRON TRANSFER
           FLAVOPROTEIN BETA-SUBUNIT (BETA-ETF) homolog [Homo
           sapiens], full insert sequence
          Length = 826

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 407 tcatcatcaatagcctgcttgcccagga 380
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>ref|NM_058572.4| Caenorhabditis elegans F23C8.5 (F23C8.5) mRNA, complete cds
          Length = 904

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 158 aatcatcatcaattgcctgcttgccgag 185
           |||||||||| ||||||||||| |||||
Sbjct: 389 aatcatcatcgattgcctgctttccgag 362
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>gb|AY030357.1| Hydra vulgaris electron transfer flavoprotein beta subunit mRNA,
           partial cds
          Length = 654

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 145 cctgtttggctgcaatcatcatcaattgcctg 176
           ||||||||| ||||||||||||| || |||||
Sbjct: 440 cctgtttggttgcaatcatcatcgatagcctg 409
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    agcgcgagggcgcggaggat 230
              ||||||||||||||||||||
Sbjct: 911561 agcgcgagggcgcggaggat 911542
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>ref|NM_001004220.1| Rattus norvegicus electron-transfer-flavoprotein, beta polypeptide
           (Etfb), mRNA
          Length = 867

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 419 tcatcatcaatagcctgcttgcccagga 392
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 174   ctgcttgccgaggatgaggaggccggggctctcctg 209
             ||||||||||||||||| |||| ||||  |||||||
Sbjct: 59972 ctgcttgccgaggatgacgaggtcgggcttctcctg 59937
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>gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 137242

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 181   ccgaggatgaggaggccggggctc 204
             ||||||| ||||||||||||||||
Sbjct: 59153 ccgaggacgaggaggccggggctc 59130
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gaggaggccggggctctcct 208
              ||||||||||||||||||||
Sbjct: 141076 gaggaggccggggctctcct 141057
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>dbj|AK066943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089N23, full
           insert sequence
          Length = 2099

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 agcgcgagggcgcggaggat 230
           ||||||||||||||||||||
Sbjct: 60  agcgcgagggcgcggaggat 41
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>gb|BC069877.1| Mus musculus electron transferring flavoprotein, beta polypeptide,
           mRNA (cDNA clone MGC:78079 IMAGE:5370580), complete cds
          Length = 859

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 160 tcatcatcaattgcctgcttgccgagga 187
           ||||||||||| ||||||||||| ||||
Sbjct: 424 tcatcatcaatagcctgcttgcccagga 397
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>gb|AF086714.1|AF086714 Mus musculus rasGAP-activating-like protein mRNA, complete cds
          Length = 3117

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  cgaggatgaggaggccgggg 201
            ||||||||||||||||||||
Sbjct: 1769 cgaggatgaggaggccgggg 1788
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    agcgcgagggcgcggaggat 230
              ||||||||||||||||||||
Sbjct: 911561 agcgcgagggcgcggaggat 911542
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>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134217

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   agcgcgagggcgcggaggat 230
             ||||||||||||||||||||
Sbjct: 49146 agcgcgagggcgcggaggat 49127
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>ref|NM_013832.2| Mus musculus RAS protein activator like 1 (GAP1 like) (Rasal1), mRNA
          Length = 3249

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  cgaggatgaggaggccgggg 201
            ||||||||||||||||||||
Sbjct: 1911 cgaggatgaggaggccgggg 1930
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>dbj|AB027196.1| Homo sapiens mRNA for RIE2 sid2705, complete cds
          Length = 3104

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ccgaggatgaggaggccggggctc 204
           ||||||| ||||||||||||||||
Sbjct: 243 ccgaggacgaggaggccggggctc 220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,641,126
Number of Sequences: 3902068
Number of extensions: 1641126
Number of successful extensions: 30935
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30625
Number of HSP's gapped (non-prelim): 310
length of query: 240
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 218
effective length of database: 17,147,199,772
effective search space: 3738089550296
effective search space used: 3738089550296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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