| Clone Name | rbasd27h13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exog... | 30 | 4.3 | 2 | MEL_VESVN (P68409) Melittin precursor | 29 | 7.3 | 3 | MEL_VESMG (P68408) Melittin precursor | 29 | 7.3 | 4 | MEL_POLHE (P59261) Melittin precursor | 29 | 7.3 | 5 | MEL_APICE (Q8LW54) Melittin precursor | 29 | 7.3 | 6 | MEL_APICC (P68407) Melittin precursor | 29 | 7.3 | 7 | COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co... | 28 | 9.6 |
|---|
>GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)| (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) Length = 525 Score = 29.6 bits (65), Expect = 4.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -3 Query: 313 TIDVMLTYDSRRRRRSTPSGATMCYFQNKW 224 T+ +T DS R SG+T CY NKW Sbjct: 45 TVQASITLDSNWRWTHQVSGSTNCYTGNKW 74
>MEL_VESVN (P68409) Melittin precursor| Length = 70 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 477 PKPEPKPELDAKARAQALPNA 415 P+PEP PE +A+A A+A P A Sbjct: 23 PEPEPAPEAEAEADAEADPEA 43
>MEL_VESMG (P68408) Melittin precursor| Length = 70 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 477 PKPEPKPELDAKARAQALPNA 415 P+PEP PE +A+A A+A P A Sbjct: 23 PEPEPAPEAEAEADAEADPEA 43
>MEL_POLHE (P59261) Melittin precursor| Length = 70 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 477 PKPEPKPELDAKARAQALPNA 415 P+PEP PE +A+A A+A P A Sbjct: 23 PEPEPAPEAEAEADAEADPEA 43
>MEL_APICE (Q8LW54) Melittin precursor| Length = 77 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 477 PKPEPKPELDAKARAQALPNA 415 P+PEP PE +A+A A+A P A Sbjct: 30 PEPEPAPEAEAEADAEADPEA 50
>MEL_APICC (P68407) Melittin precursor| Length = 70 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 477 PKPEPKPELDAKARAQALPNA 415 P+PEP PE +A+A A+A P A Sbjct: 23 PEPEPAPEAEAEADAEADPEA 43
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = +2 Query: 35 HVYIHERTTES---CAQMNAY---QHANDNYKVVIIIMGAWNKRN*KGMMEYKECKKDAS 196 H + E TT S C N Y Q A+ +Y+ ++ + W K +MEY+E +K A Sbjct: 408 HCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTV---WTMTTRKSLMEYEEHEKRAW 464 Query: 197 SL 202 S+ Sbjct: 465 SV 466 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,696,793 Number of Sequences: 219361 Number of extensions: 865826 Number of successful extensions: 2159 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2132 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)