ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27e20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008979.1| Triticum aestivum clone wdk2c.pk005.k24:fis, full insert mRNA sequence Length = 1418 Score = 613 bits (309), Expect = e-172 Identities = 429/469 (91%) Strand = Plus / Minus Query: 178 ggcggcagcggcgttgtcaagggtattgccgatgtcgatgacgaatcgatacctgacatc 237 |||||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||||| || Sbjct: 1207 ggcggcggcggccttgtcgagggtgttggcgatgtcgatgacgaatcgatacctgacgtc 1148 Query: 238 ggccttggcaagtcgctccatggccgtgttcacgtactcggcgtcaatcacctcgatgtc 297 |||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 1147 ggccttggcaaggcgctccatggccgtgttcacgtactccgcgccgatcacctcgatgtc 1088 Query: 298 cgccgtcacgtcgtgcttcgccgccagatccagcatctcctgggtgtccctcatgccgcc 357 ||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1087 tgccgtcacgccgtgcttcgccgcgaggtccagcatctcctgggtgtccctcatgccgcc 1028 Query: 358 gatgcagctcccggccagggtcttgttcgtggcaaccagagcaaagggggagatctccat 417 |||||||||||| ||||||||||||||| ||||||||||||||||||| | || ||| || Sbjct: 1027 gatgcagctccccgccagggtcttgttcctggcaaccagagcaaagggagggacctcgat 968 Query: 418 aggattctcggggaggccaaccatgatcatcttgccgttgggtttcagtagccctaagag 477 ||| ||||| |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 967 aggcttctccgggaggccgaccatgatcatcttgccgttgggcttgagtagcccgaagag 908 Query: 478 aggggccatggggatgtttgcagacaccgtgtttatgatgccatccatggtattcattgc 537 |||||||||||| | |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 907 aggggccatgggcacgtttgcagacaccgtgtttatgatgccatccatggtgctcatagt 848 Query: 538 agccttcatctcctcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgag 597 |||||||||||| || || |||||||||||||||||||||||||| |||| || |||||| Sbjct: 847 agccttcatctcgtcggcgtccttgctgacaacgaacgcgtcggcgcctagcctctcgag 788 Query: 598 ggcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 787 ggcctcctgcttcttccccggcgacgagctgatcacggtcaccttcatc 739
>gb|AF472592.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD2) mRNA, complete cds Length = 1378 Score = 466 bits (235), Expect = e-128 Identities = 400/455 (87%) Strand = Plus / Minus Query: 191 ttgtcaagggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagt 250 ||||| ||||| |||||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1192 ttgtcgagggtgttgccgatgtcgatgacgaagcgatacctgacgtcgttcttggcaagg 1133 Query: 251 cgctccatggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcg 310 ||||||| |||||||||||| ||||| ||| | | |||||||||||| ||||||||| || Sbjct: 1132 cgctccaaggccgtgttcacatactccgcgccgaccacctcgatgtcggccgtcacgccg 1073 Query: 311 tgcttcgccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccg 370 ||||||||||| || |||||||||||||| ||||| ||||||||||||||| ||||||| Sbjct: 1072 tgcttcgccgcgaggtccagcatctcctgcgtgtcgctcatgccgccgatgatgctcccg 1013 Query: 371 gccagggtcttgttcgtggcaaccagagcaaagggggagatctccataggattctcgggg 430 ||||||||||| ||||||||||| ||||| ||||| | ||||| || || ||||||||| Sbjct: 1012 gccagggtcttattcgtggcaactagagcgaagggaggaatctcgatgggcttctcgggg 953 Query: 431 aggccaaccatgatcatcttgccgttgggtttcagtagccctaagagaggggccatgggg 490 ||||| ||||||||||||||||||||||| || || ||||| |||||||||| || |||| Sbjct: 952 aggccgaccatgatcatcttgccgttgggcttgagcagcccgaagagaggggtcaggggg 893 Query: 491 atgtttgcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcc 550 ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 892 atgtttgcagataccgtgtttatgatgccatccatggtgctcatcacagccttcatctcg 833 Query: 551 tcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttc 610 || || ||||||||||| | |||||||||||| || | |||| | |||||||||| |||| Sbjct: 832 tcggcgtccttgctgacgatgaacgcgtcggcgcccagccgccccagggcctcctccttc 773 Query: 611 ttcccgggcgacgagctgatcaccgtcaccttcat 645 ||||| ||||||||||||||||||||||| ||||| Sbjct: 772 ttccccggcgacgagctgatcaccgtcactttcat 738
>ref|NM_196623.1| Oryza sativa (japonica cultivar-group) putative cinnamyl alcohol dehydrogenase (OSJNBa0073D04.1), mRNA Length = 1491 Score = 254 bits (128), Expect = 3e-64 Identities = 368/448 (82%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 1241 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 1182 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 1181 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 1122 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 1121 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 1062 Query: 377 gtcttgttcgtggcaaccagagcaaagggggagatctccataggattctcggggaggcca 436 ||| ||||| | || |||| ||||| | || ||||| |||||||| |||||||| Sbjct: 1061 gtcctgttcccgtggacgagagagaagggagggacctccaggggattctccgggaggccg 1002 Query: 437 accatgatcatcttgccgttgggtttcagtagccctaagagaggggccatggggatgttt 496 || | ||||||||| |||||||| ||||| | | | | | || ||||||||| |||| Sbjct: 1001 acgaggatcatcttcccgttgggcttcagcaacgccaggtacggcgccatgggggtgttg 942 Query: 497 gcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcctcagca 556 || || |||||||| |||| ||| |||||||| | | || |||| ||||||||| || Sbjct: 941 gcggagaccgtgttgatgacgccgtccatggtggacctcgcggcctccatctcctcggcg 882 Query: 557 tccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccg 616 |||| || |||||||||||||| || | |||||| || |||||| |||||||||| Sbjct: 881 ctgctgctcacgacgaacgcgtcggcgccgagccgctccagcgcctcccgcttcttcccc 822 Query: 617 ggcgacgagctgatcaccgtcaccttca 644 |||||||||||||||||||||||||||| Sbjct: 821 ggcgacgagctgatcaccgtcaccttca 794
>dbj|AK104047.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H02, full insert sequence Length = 1416 Score = 254 bits (128), Expect = 3e-64 Identities = 368/448 (82%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 1194 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 1135 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 1134 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 1075 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 1074 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 1015 Query: 377 gtcttgttcgtggcaaccagagcaaagggggagatctccataggattctcggggaggcca 436 ||| ||||| | || |||| ||||| | || ||||| |||||||| |||||||| Sbjct: 1014 gtcctgttcccgtggacgagagagaagggagggacctccaggggattctccgggaggccg 955 Query: 437 accatgatcatcttgccgttgggtttcagtagccctaagagaggggccatggggatgttt 496 || | ||||||||| |||||||| ||||| | | | | | || ||||||||| |||| Sbjct: 954 acgaggatcatcttcccgttgggcttcagcaacgccaggtacggcgccatgggggtgttg 895 Query: 497 gcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcctcagca 556 || || |||||||| |||| ||| |||||||| | | || |||| ||||||||| || Sbjct: 894 gcggagaccgtgttgatgacgccgtccatggtggacctcgcggcctccatctcctcggcg 835 Query: 557 tccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccg 616 |||| || |||||||||||||| || | |||||| || |||||| |||||||||| Sbjct: 834 ctgctgctcacgacgaacgcgtcggcgccgagccgctccagcgcctcccgcttcttcccc 775 Query: 617 ggcgacgagctgatcaccgtcaccttca 644 |||||||||||||||||||||||||||| Sbjct: 774 ggcgacgagctgatcaccgtcaccttca 747
>dbj|AK099176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090E20, full insert sequence Length = 1394 Score = 254 bits (128), Expect = 3e-64 Identities = 368/448 (82%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 1158 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 1099 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 1098 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 1039 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 1038 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 979 Query: 377 gtcttgttcgtggcaaccagagcaaagggggagatctccataggattctcggggaggcca 436 ||| ||||| | || |||| ||||| | || ||||| |||||||| |||||||| Sbjct: 978 gtcctgttcccgtggacgagagagaagggagggacctccaggggattctccgggaggccg 919 Query: 437 accatgatcatcttgccgttgggtttcagtagccctaagagaggggccatggggatgttt 496 || | ||||||||| |||||||| ||||| | | | | | || ||||||||| |||| Sbjct: 918 acgaggatcatcttcccgttgggcttcagcaacgccaggtacggcgccatgggggtgttg 859 Query: 497 gcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcctcagca 556 || || |||||||| |||| ||| |||||||| | | || |||| ||||||||| || Sbjct: 858 gcggagaccgtgttgatgacgccgtccatggtggacctcgcggcctccatctcctcggcg 799 Query: 557 tccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccg 616 |||| || |||||||||||||| || | |||||| || |||||| |||||||||| Sbjct: 798 ctgctgctcacgacgaacgcgtcggcgccgagccgctccagcgcctcccgcttcttcccc 739 Query: 617 ggcgacgagctgatcaccgtcaccttca 644 |||||||||||||||||||||||||||| Sbjct: 738 ggcgacgagctgatcaccgtcaccttca 711
>dbj|AK069040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B20, full insert sequence Length = 1565 Score = 246 bits (124), Expect = 8e-62 Identities = 367/448 (81%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 1280 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 1221 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| | |||||| Sbjct: 1220 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccatgcttc 1161 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 1160 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 1101 Query: 377 gtcttgttcgtggcaaccagagcaaagggggagatctccataggattctcggggaggcca 436 ||| ||||| | || |||| ||||| | || ||||| |||||||| |||||||| Sbjct: 1100 gtcctgttcccgtggacgagagagaagggagggacctccaggggattctccgggaggccg 1041 Query: 437 accatgatcatcttgccgttgggtttcagtagccctaagagaggggccatggggatgttt 496 || | ||||||||| |||||||| ||||| | | | | | || ||||||||| |||| Sbjct: 1040 acgaggatcatcttcccgttgggcttcagcaacgccaggtacggcgccatgggggtgttg 981 Query: 497 gcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcctcagca 556 || || |||||||| |||| ||| |||||||| | | || |||| ||||||||| || Sbjct: 980 gcggagaccgtgttgatgacgccgtccatggtggacctcgcggcctccatctcctcggcg 921 Query: 557 tccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccg 616 |||| || |||||||||||||| || | |||||| || |||||| |||||||||| Sbjct: 920 ctgctgctcacgacgaacgcgtcggcgccgagccgctccagcgcctcccgcttcttcccc 861 Query: 617 ggcgacgagctgatcaccgtcaccttca 644 |||||||||||||||||||||||||||| Sbjct: 860 ggcgacgagctgatcaccgtcaccttca 833
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 218 bits (110), Expect = 2e-53 Identities = 170/190 (89%) Strand = Plus / Plus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| ||||||||||| || |||||| Sbjct: 10349080 agggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgctcc 10349139 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 ||||||||||||||||| |||||| | ||||||||||| |||||||||||| |||||||| Sbjct: 10349140 atggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgcttc 10349199 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 || ||||| || | |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 10349200 gctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggccagc 10349259 Query: 377 gtcttgttcg 386 |||||||||| Sbjct: 10349260 gtcttgttcg 10349269 Score = 147 bits (74), Expect = 5e-32 Identities = 212/258 (82%) Strand = Plus / Plus Query: 389 gcaaccagagcaaagggggagatctccataggattctcggggaggccaaccatgatcatc 448 ||||||||||| ||||| | ||||||||| || ||||| || ||||| || | ||||||| Sbjct: 10349375 gcaaccagagcgaagggagggatctccatgggcttctccggcaggccgacgaggatcatc 10349434 Query: 449 ttgccgttgggtttcagtagccctaagagaggggccatggggatgtttgcagacaccgtg 508 || |||||||| ||||| || || | || || || || || ||||| |||||||||||| Sbjct: 10349435 ttcccgttgggcttcagcagacccagcagcggcgcgatcggaatgttggcagacaccgtg 10349494 Query: 509 tttatgatgccatccatggtattcattgcagccttcatctcctcagcatccttgctgaca 568 || |||||||| |||||||| | | || || |||||||| || |||| |||| ||| Sbjct: 10349495 ttgatgatgccgtccatggtgcccgtcgcggcattcatctcgtcggcattcttggagacg 10349554 Query: 569 acgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctg 628 |||||||||||||| || | |||||| || ||||||||| ||||||| |||||||||||| Sbjct: 10349555 acgaacgcgtcggcgccgagccgctccagcgcctcctgcctcttccccggcgacgagctg 10349614 Query: 629 atcaccgtcaccttcatc 646 |||||||||||| ||||| Sbjct: 10349615 atcaccgtcaccgtcatc 10349632 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| ||||||||||| || |||||| Sbjct: 7353143 agggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgctcc 7353084 Query: 257 atggccgt 264 |||||||| Sbjct: 7353083 atggccgt 7353076
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 218 bits (110), Expect = 2e-53 Identities = 170/190 (89%) Strand = Plus / Plus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| ||||||||||| || |||||| Sbjct: 50038 agggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgctcc 50097 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 ||||||||||||||||| |||||| | ||||||||||| |||||||||||| |||||||| Sbjct: 50098 atggccgtgttcacgtagtcggcgccgatcacctcgatctccgccgtcacgccgtgcttc 50157 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 || ||||| || | |||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 50158 gctgccaggtcgatcatctcctacgtgtccgccatgccgccgatgcagctcccggccagc 50217 Query: 377 gtcttgttcg 386 |||||||||| Sbjct: 50218 gtcttgttcg 50227 Score = 147 bits (74), Expect = 5e-32 Identities = 212/258 (82%) Strand = Plus / Plus Query: 389 gcaaccagagcaaagggggagatctccataggattctcggggaggccaaccatgatcatc 448 ||||||||||| ||||| | ||||||||| || ||||| || ||||| || | ||||||| Sbjct: 50333 gcaaccagagcgaagggagggatctccatgggcttctccggcaggccgacgaggatcatc 50392 Query: 449 ttgccgttgggtttcagtagccctaagagaggggccatggggatgtttgcagacaccgtg 508 || |||||||| ||||| || || | || || || || || ||||| |||||||||||| Sbjct: 50393 ttcccgttgggcttcagcagacccagcagcggcgcgatcggaatgttggcagacaccgtg 50452 Query: 509 tttatgatgccatccatggtattcattgcagccttcatctcctcagcatccttgctgaca 568 || |||||||| |||||||| | | || || |||||||| || |||| |||| ||| Sbjct: 50453 ttgatgatgccgtccatggtgcccgtcgcggcattcatctcgtcggcattcttggagacg 50512 Query: 569 acgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctg 628 |||||||||||||| || | |||||| || ||||||||| ||||||| |||||||||||| Sbjct: 50513 acgaacgcgtcggcgccgagccgctccagcgcctcctgcctcttccccggcgacgagctg 50572 Query: 629 atcaccgtcaccttcatc 646 |||||||||||| ||||| Sbjct: 50573 atcaccgtcaccgtcatc 50590
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 192 bits (97), Expect = 1e-45 Identities = 166/189 (87%) Strand = Plus / Plus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 115165 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 115224 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 115225 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 115284 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 115285 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 115344 Query: 377 gtcttgttc 385 ||| ||||| Sbjct: 115345 gtcctgttc 115353 Score = 99.6 bits (50), Expect = 1e-17 Identities = 182/226 (80%) Strand = Plus / Plus Query: 419 ggattctcggggaggccaaccatgatcatcttgccgttgggtttcagtagccctaagaga 478 |||||||| |||||||| || | ||||||||| |||||||| ||||| | | | | | Sbjct: 115471 ggattctccgggaggccgacgaggatcatcttcccgttgggcttcagcaacgccaggtac 115530 Query: 479 ggggccatggggatgtttgcagacaccgtgtttatgatgccatccatggtattcattgca 538 || ||||||||| |||| || || |||||||| |||| ||| |||||||| | | || Sbjct: 115531 ggcgccatgggggtgttggcggagaccgtgttgatgacgccgtccatggtggacctcgcg 115590 Query: 539 gccttcatctcctcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgagg 598 |||| ||||||||| || |||| || |||||||||||||| || | |||||| || Sbjct: 115591 gcctccatctcctcggcgctgctgctcacgacgaacgcgtcggcgccgagccgctccagc 115650 Query: 599 gcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttca 644 |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 115651 gcctcccgcttcttccccggcgacgagctgatcaccgtcaccttca 115696
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 192 bits (97), Expect = 1e-45 Identities = 166/189 (87%) Strand = Plus / Plus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 14790016 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 14790075 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 14790076 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 14790135 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 14790136 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 14790195 Query: 377 gtcttgttc 385 ||| ||||| Sbjct: 14790196 gtcctgttc 14790204 Score = 99.6 bits (50), Expect = 1e-17 Identities = 182/226 (80%) Strand = Plus / Plus Query: 419 ggattctcggggaggccaaccatgatcatcttgccgttgggtttcagtagccctaagaga 478 |||||||| |||||||| || | ||||||||| |||||||| ||||| | | | | | Sbjct: 14790322 ggattctccgggaggccgacgaggatcatcttcccgttgggcttcagcaacgccaggtac 14790381 Query: 479 ggggccatggggatgtttgcagacaccgtgtttatgatgccatccatggtattcattgca 538 || ||||||||| |||| || || |||||||| |||| ||| |||||||| | | || Sbjct: 14790382 ggcgccatgggggtgttggcggagaccgtgttgatgacgccgtccatggtggacctcgcg 14790441 Query: 539 gccttcatctcctcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgagg 598 |||| ||||||||| || |||| || |||||||||||||| || | |||||| || Sbjct: 14790442 gcctccatctcctcggcgctgctgctcacgacgaacgcgtcggcgccgagccgctccagc 14790501 Query: 599 gcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttca 644 |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 14790502 gcctcccgcttcttccccggcgacgagctgatcaccgtcaccttca 14790547
>gb|AY110917.1| Zea mays CL4921_1 mRNA sequence Length = 1136 Score = 192 bits (97), Expect = 1e-45 Identities = 166/189 (87%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| || |||||||| || |||||| Sbjct: 566 agggtgttgccgatgtcgatgacgaagcggtacctgacgtcagccttggccaggcgctcc 507 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 ||||||||||||||||| || ||| | | || || ||||||||||||||| ||||||| Sbjct: 506 atggccgtgttcacgtagtccgcggccaccagttctatgtccgccgtcacgccgtgcttg 447 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 ||||||| | | ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 446 gccgccacgttgatcatctcctgcgtgtccctcatgccgccgatgcagctcccggccagg 387 Query: 377 gtcttgttc 385 ||||||||| Sbjct: 386 gtcttgttc 378 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 431 aggccaaccatgatcatcttgccgttgggtttcagtagccctaagagaggggccatgggg 490 ||||| ||||||||||||||||||||||| || || || || | | ||||||| || | Sbjct: 332 aggccgaccatgatcatcttgccgttgggcttgagcaggcccatgtacggggccaaggtg 273 Query: 491 atgtttgcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcc 550 | ||| || ||||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 272 aggttcgccgacaccgtgttgatgatgccgtccatggtgctcgcagccgccttcatttct 213 Query: 551 tcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttc 610 || || ||||||||||| ||||| |||||||| || | ||| ||||| |||||||||||| Sbjct: 212 tcggcgtccttgctgacgacgaaggcgtcggcgccaagccggtcgagcgcctcctgcttc 153 Query: 611 ttcccgggcgacgagctgatcaccgtcacctt 642 ||||| ||||||| |||||| ||||| ||||| Sbjct: 152 ttcccaggcgacgtgctgatgaccgtgacctt 121
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 192 bits (97), Expect = 1e-45 Identities = 166/189 (87%) Strand = Plus / Plus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| || |||| |||||||||||| |||||||||||||| |||||||| || |||||| Sbjct: 14798257 agggtgttcccgacgtcgatgacgaagcgatacctgacatccgccttggcgaggcgctcc 14798316 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||||||||||||| |||||| | |||||||||||||||||||||||| |||||||| Sbjct: 14798317 atggccgtgttcacgtcgtcggcgccgatcacctcgatgtccgccgtcacgccgtgcttc 14798376 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 |||||||| || | ||||||||| |||||| ||||||||||||| |||||| ||||| Sbjct: 14798377 gccgccagctcgatcatctcctgcgtgtccgccatgccgccgatgttgctccctgccaga 14798436 Query: 377 gtcttgttc 385 ||| ||||| Sbjct: 14798437 gtcctgttc 14798445 Score = 99.6 bits (50), Expect = 1e-17 Identities = 182/226 (80%) Strand = Plus / Plus Query: 419 ggattctcggggaggccaaccatgatcatcttgccgttgggtttcagtagccctaagaga 478 |||||||| |||||||| || | ||||||||| |||||||| ||||| | | | | | Sbjct: 14798563 ggattctccgggaggccgacgaggatcatcttcccgttgggcttcagcaacgccaggtac 14798622 Query: 479 ggggccatggggatgtttgcagacaccgtgtttatgatgccatccatggtattcattgca 538 || ||||||||| |||| || || |||||||| |||| ||| |||||||| | | || Sbjct: 14798623 ggcgccatgggggtgttggcggagaccgtgttgatgacgccgtccatggtggacctcgcg 14798682 Query: 539 gccttcatctcctcagcatccttgctgacaacgaacgcgtcggcacctaaccgctcgagg 598 |||| ||||||||| || |||| || |||||||||||||| || | |||||| || Sbjct: 14798683 gcctccatctcctcggcgctgctgctcacgacgaacgcgtcggcgccgagccgctccagc 14798742 Query: 599 gcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttca 644 |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 14798743 gcctcccgcttcttccccggcgacgagctgatcaccgtcaccttca 14798788
>ref|XM_473865.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| ||||||||||||| |||||| || |||||||| ||| ||||||| || |||||| Sbjct: 1220 agggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgctcc 1161 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtc 297 |||||||||||||| | |||||| | |||| ||||||||| Sbjct: 1160 atggccgtgttcacctcgtcggcgccgatcagctcgatgtc 1120 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 596 agggcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||| ||||| | ||||||| |||||||||||||||| ||||| Sbjct: 728 agggcctcctgcctcttcaccggcgacgtgctgatcaccgtcaccctcatc 678 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 422 ttctcggggaggccaaccatgatcatcttgccgttgggtttca 464 ||||| || |||||||||| |||||||||||| ||||| |||| Sbjct: 995 ttctcaggcaggccaaccaagatcatcttgcccttgggcttca 953
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| ||||||||||||| |||||| || |||||||| ||| ||||||| || |||||| Sbjct: 89566 agggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgctcc 89507 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtc 297 |||||||||||||| | |||||| | |||| ||||||||| Sbjct: 89506 atggccgtgttcacctcgtcggcgccgatcagctcgatgtc 89466 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 596 agggcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||| ||||| | ||||||| |||||||||||||||| ||||| Sbjct: 88472 agggcctcctgcctcttcaccggcgacgtgctgatcaccgtcaccctcatc 88422 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 422 ttctcggggaggccaaccatgatcatcttgccgttgggtttca 464 ||||| || |||||||||| |||||||||||| ||||| |||| Sbjct: 89240 ttctcaggcaggccaaccaagatcatcttgcccttgggcttca 89198
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| ||||||||||||| |||||| || |||||||| ||| ||||||| || |||||| Sbjct: 31107485 agggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgctcc 31107426 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtc 297 |||||||||||||| | |||||| | |||| ||||||||| Sbjct: 31107425 atggccgtgttcacctcgtcggcgccgatcagctcgatgtc 31107385 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 596 agggcctcctgcttcttcccgggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||| ||||| | ||||||| |||||||||||||||| ||||| Sbjct: 31106391 agggcctcctgcctcttcaccggcgacgtgctgatcaccgtcaccctcatc 31106341 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 422 ttctcggggaggccaaccatgatcatcttgccgttgggtttca 464 ||||| || |||||||||| |||||||||||| ||||| |||| Sbjct: 31107159 ttctcaggcaggccaaccaagatcatcttgcccttgggcttca 31107117 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 33149245 cagtggtggcggcggcagcg 33149226 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 29600127 cagtggtggcggcggcagcg 29600108 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 4476622 cagtggtggcggcggcagcg 4476641
>dbj|AK102452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P08, full insert sequence Length = 1329 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| ||||||||||||| |||||| || |||||||| ||| ||||||| || |||||| Sbjct: 1173 agggtgttgccgatgtcgacgacgaagcggtacctgacgtcgcccttggcgaggcgctcc 1114 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtc 297 |||||||||||||| | |||||| | |||| ||||||||| Sbjct: 1113 atggccgtgttcacctcgtcggcgccgatcagctcgatgtc 1073 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 495 ttgcagacaccgtgtttatgatgccatccatggtattcattgcagccttcatctcctcag 554 ||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| | Sbjct: 875 ttgcagaggccgtgttgatgatgccatgcatggtgcccatcgcagccttcatctcactgg 816 Query: 555 catccttgctgacaacgaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcc 614 | | ||||||| | ||| ||||||| || | || ||| |||||||||||| ||||| Sbjct: 815 cgttggtgctgacgatgaagccgtcggcgccgagcctctccagggcctcctgcctcttca 756 Query: 615 cgggcgacgagctgatcaccgtcaccttcatc 646 | ||||||| |||||||||||||||| ||||| Sbjct: 755 ccggcgacgtgctgatcaccgtcaccctcatc 724 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 422 ttctcggggaggccaaccatgatcatcttgccgttgggtttca 464 ||||| || |||||||||| |||||||||||| ||||| |||| Sbjct: 948 ttctcaggcaggccaaccaagatcatcttgcccttgggcttca 906
>dbj|AP005324.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0691F12 Length = 139482 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| ||||||||||| || |||||| Sbjct: 92572 agggtgttgccgatgtcgatgacgaagcggtacctgacgtcggccttggcgaggcgctcc 92513 Query: 257 atggccgt 264 |||||||| Sbjct: 92512 atggccgt 92505
>gb|AY107698.1| Zea mays PCO143419 mRNA sequence Length = 1374 Score = 75.8 bits (38), Expect = 2e-10 Identities = 149/186 (80%) Strand = Plus / Minus Query: 197 agggtattgccgatgtcgatgacgaatcgatacctgacatcggccttggcaagtcgctcc 256 ||||| |||||||||||||||||||| || |||||||| ||| ||||||| || || ||| Sbjct: 1205 agggtgttgccgatgtcgatgacgaagcggtacctgacctcgcccttggcgaggcgttcc 1146 Query: 257 atggccgtgttcacgtactcggcgtcaatcacctcgatgtccgccgtcacgtcgtgcttc 316 |||||| || || | |||| | | |||| ||||||||||| | || ||||||| Sbjct: 1145 atggcctcattaacttcttcggtgccgatcagttcgatgtccgctgccaacccgtgcttg 1086 Query: 317 gccgccagatccagcatctcctgggtgtccctcatgccgccgatgcagctcccggccagg 376 || || | |||| ||||||||| |||||||| |||| || ||||||||||||||||| Sbjct: 1085 gctgcgaagtccatcatctcctgcgtgtccctgatgctccccatgcagctcccggccaga 1026 Query: 377 gtcttg 382 |||||| Sbjct: 1025 gtcttg 1020
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 571 gaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctgat 630 |||||||||||| || | |||||| || ||||||| | |||| | |||||||||||||| Sbjct: 13928941 gaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgacgagctgat 13929000 Query: 631 caccgtcaccttcatc 646 |||||||||||||||| Sbjct: 13929001 caccgtcaccttcatc 13929016 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 617 ggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||||||||||||||||||||| Sbjct: 13947558 ggcgacgagctgatcaccgtcaccttcatc 13947529
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 571 gaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctgat 630 |||||||||||| || | |||||| || ||||||| | |||| | |||||||||||||| Sbjct: 82618 gaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgacgagctgat 82677 Query: 631 caccgtcaccttcatc 646 |||||||||||||||| Sbjct: 82678 caccgtcaccttcatc 82693 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 617 ggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||||||||||||||||||||| Sbjct: 101235 ggcgacgagctgatcaccgtcaccttcatc 101206
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 571 gaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctgat 630 |||||||||||| || | |||||| || ||||||| | |||| | |||||||||||||| Sbjct: 31415 gaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgacgagctgat 31474 Query: 631 caccgtcaccttcatc 646 |||||||||||||||| Sbjct: 31475 caccgtcaccttcatc 31490 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 617 ggcgacgagctgatcaccgtcaccttcatc 646 |||||||||||||||||||||||||||||| Sbjct: 50032 ggcgacgagctgatcaccgtcaccttcatc 50003
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full insert sequence Length = 1407 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 571 gaacgcgtcggcacctaaccgctcgagggcctcctgcttcttcccgggcgacgagctgat 630 |||||||||||| || | |||||| || ||||||| | |||| | |||||||||||||| Sbjct: 796 gaacgcgtcggcgccgagccgctccagcgcctcctcccgcttcgccggcgacgagctgat 737 Query: 631 caccgtcaccttcatc 646 |||||||||||||||| Sbjct: 736 caccgtcaccttcatc 721
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 325 atccagcatctcctgggtgtccctcatgccgccgat 360 |||||||||||||||||| |||| ||||||||||| Sbjct: 1672816 atccagcatctcctgggtttcccggatgccgccgat 1672851
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 169 agtggtggcggcggcagcggcg 190 |||||||||||||||||||||| Sbjct: 26079 agtggtggcggcggcagcggcg 26100
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcggc 189 |||||||||||||||||||||| Sbjct: 108671 cagtggtggcggcggcagcggc 108692
>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence Length = 197318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 cacacacacaaaatgatttca 121 ||||||||||||||||||||| Sbjct: 194414 cacacacacaaaatgatttca 194394
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1387 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 780 cgacgagctgatcaccgtcac 760
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA Length = 1396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 774 cgacgagctgatcaccgtcac 754
>ref|NM_172739.3| Mus musculus glucocorticoid receptor DNA binding factor 1 (Grlf1), mRNA Length = 7827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgtc 195 ||||||||||||||||||||| Sbjct: 196 ggcggcggcagcggcgttgtc 176
>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence Length = 179099 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 cattgcagccttcatctcctcagca 556 |||||||| |||||||||||||||| Sbjct: 158932 cattgcaggcttcatctcctcagca 158956
>ref|XM_001000371.1| PREDICTED: Mus musculus hypothetical protein LOC672674 (LOC672674), mRNA Length = 666 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ctcagtggtggcggcggcagcggcg 190 |||||||| |||||||||||||||| Sbjct: 444 ctcagtggcggcggcggcagcggcg 468
>ref|XM_978123.1| PREDICTED: Mus musculus hypothetical protein LOC665607 (LOC665607), mRNA Length = 786 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ctcagtggtggcggcggcagcggcg 190 |||||||| |||||||||||||||| Sbjct: 564 ctcagtggcggcggcggcagcggcg 588
>ref|XM_540761.2| PREDICTED: Canis familiaris similar to cryptochrome 2 (photolyase-like) (LOC483641), mRNA Length = 1785 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 16 gtggtggcggcggcagcggcg 36
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 54022 gtggtggcggcggcagcggcg 54002
>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence Length = 174507 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 cacacacacaaaatgatttca 121 ||||||||||||||||||||| Sbjct: 161077 cacacacacaaaatgatttca 161097
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 822 cgacgagctgatcaccgtcac 802
>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC Length = 226001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 122438 gtggtggcggcggcagcggcg 122458
>gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete sequence Length = 122623 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 10744 tcattgcagccttcatctcct 10724
>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six novel pseudogenes, the FAM27B gene for family with sequence similarity 27, member B, a pseudogene similar to part of ribosomal protein L10 (RPL10) and four CpG islands, complete sequence Length = 194246 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 8355 tcattgcagccttcatctcct 8375
>emb|AL353805.20| Human DNA sequence from clone RP11-190I13 on chromosome 9 Contains the 5' end of a novel gene (FLJ20287), a novel gene similar to RIKEN cDNA 5730528L13 gene (MGC17337), the 5' end of the TMEFF1 gene for transmembrane protein with EGF-like and two follistatin-like domains 1 (H7365, C9ORF2) and four CpG islands, complete sequence Length = 158606 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 139771 gtggtggcggcggcagcggcg 139791
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 3760208 cgacgagctgatcaccgtcac 3760188
>gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, complete sequence Length = 150680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 140446 tcattgcagccttcatctcct 140426
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 766 cgacgagctgatcaccgtcac 746
>gb|BC035056.1| Homo sapiens transmembrane protein with EGF-like and two follistatin-like domains 1, mRNA (cDNA clone MGC:41873 IMAGE:5262325), complete cds Length = 2299 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 243 gtggtggcggcggcagcggcg 263
>emb|AJ439993.1|STU439993 Solanum tuberosum mRNA for alcohol NADP+ oxidoreductase (drd-1 gene) Length = 1261 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 ttcattgcagccttcatctcctcag 554 ||||||||||||||||||| ||||| Sbjct: 807 ttcattgcagccttcatctgctcag 783
>gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosome 14, complete sequence Length = 199995 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 81989 gtggtggcggcggcagcggcg 81969
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 711 cgacgagctgatcaccgtcac 691
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 cattgcagccttcatctcctcagca 556 |||||||| |||||||||||||||| Sbjct: 127553 cattgcaggcttcatctcctcagca 127529
>emb|BX548008.7| Zebrafish DNA sequence from clone DKEY-220G10 in linkage group 23, complete sequence Length = 186246 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ttgatcacatacaacaaaata 69 ||||||||||||||||||||| Sbjct: 62680 ttgatcacatacaacaaaata 62660
>gb|AC182493.3| Pan troglodytes BAC clone CH251-215H7 from chromosome 15, complete sequence Length = 156271 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacattttcacacacacaaaa 113 ||||||||||||||||||||| Sbjct: 146946 tacattttcacacacacaaaa 146926
>gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, complete sequence Length = 160250 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 ggacttccttgatcacatacaacaa 65 ||||||||||||| ||||||||||| Sbjct: 104940 ggacttccttgattacatacaacaa 104964
>gb|DQ234272.1| Oryza sativa (indica cultivar-group) cinnamyl-alcohol dehydrogenase (GH2) gene, complete cds Length = 4320 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 3550 cgacgagctgatcaccgtcac 3530
>dbj|AK147326.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1013E11 product:Glucocorticoid receptor DNA binding factor 1 (GAP-associated protein p190) homolog [Rattus norvegicus], full insert sequence Length = 7827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgtc 195 ||||||||||||||||||||| Sbjct: 196 ggcggcggcagcggcgttgtc 176
>gb|AC010240.7| Homo sapiens chromosome 5 clone CTC-350I8, complete sequence Length = 112646 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 69964 tcattgcagccttcatctcct 69944
>dbj|AK147688.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1108E05 product:Glucocorticoid receptor DNA binding factor 1 (GAP-associated protein p190) homolog [Rattus norvegicus], full insert sequence Length = 7827 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgtc 195 ||||||||||||||||||||| Sbjct: 196 ggcggcggcagcggcgttgtc 176
>gb|AF119697.1|AF119697 Mesocestoides sp. LC9708 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 539 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 115 ggtggcggcggcagcggcgtt 135
>gb|AF119696.1|AF119696 Mesocestoides corti isolate SO2-MC1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 115 ggtggcggcggcagcggcgtt 135
>gb|AF119695.1|AF119695 Mesocestoides corti isolate SO1-MC1 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 115 ggtggcggcggcagcggcgtt 135
>gb|AF119694.1|AF119694 Mesocestoides corti isolate MeCo2 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 115 ggtggcggcggcagcggcgtt 135
>gb|DQ096556.1| Mesocestoides sp. B KP-2005 isolate KAP711 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 96 ggtggcggcggcagcggcgtt 116
>gb|DQ096555.1| Mesocestoides sp. B KP-2005 isolate KAP299 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 481 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 96 ggtggcggcggcagcggcgtt 116
>gb|DQ096554.1| Mesocestoides sp. B KP-2005 isolate KAP106B 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 96 ggtggcggcggcagcggcgtt 116
>gb|DQ096553.1| Mesocestoides sp. B KP-2005 isolate KAP300B 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 481 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 96 ggtggcggcggcagcggcgtt 116
>gb|DQ096552.1| Mesocestoides sp. B KP-2005 isolate KAP302B 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence Length = 482 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgtt 192 ||||||||||||||||||||| Sbjct: 96 ggtggcggcggcagcggcgtt 116
>gb|AC011377.6| Homo sapiens chromosome 5 clone CTB-120L21, complete sequence Length = 54375 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 33704 tcattgcagccttcatctcct 33684
>gb|AF338113.1|AF338113 Zea mays clone tac_6087 Ac insertion site in stc1 locus Length = 1040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 436 gtggtggcggcggcagcggcg 416
>gb|AF338112.1|AF338112 Zea mays clone tac_6067 Ac insertion site in stc1 locus Length = 1040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 436 gtggtggcggcggcagcggcg 416
>tpg|BK003969.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cinnamyl alcohol dehydrogenase (CAD2) gene, complete cds Length = 4183 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 3392 cgacgagctgatcaccgtcac 3372
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 4870768 cgacgagctgatcaccgtcac 4870788 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 35589589 cagtggtggcggcggcagcg 35589608 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggtggcggcggcagcggcgttgtc 195 ||||||| |||||||||||||||| Sbjct: 25749096 ggtggcgacggcagcggcgttgtc 25749073
>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete sequence Length = 193804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacattttcacacacacaaaa 113 ||||||||||||||||||||| Sbjct: 21261 tacattttcacacacacaaaa 21241
>gb|AC066615.7|AC066615 Homo sapiens chromosome 15 clone RP11-90J19 map 15q21.1, complete sequence Length = 175001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacattttcacacacacaaaa 113 ||||||||||||||||||||| Sbjct: 116741 tacattttcacacacacaaaa 116721
>gb|AF296122.1|AF296122 Zea mays sesquiterpene cyclase 1 (stc1) mRNA, Stc1-McC allele, complete cds Length = 2028 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 190 gtggtggcggcggcagcggcg 170
>gb|AC024255.22|AC024255 Homo sapiens 12 BAC RP11-31A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165236 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 atttcagattgtttcttgtta 136 ||||||||||||||||||||| Sbjct: 10122 atttcagattgtttcttgtta 10142
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 326 tccagcatctcctgggtgtccctcatgccgccgatgc 362 ||||||||||||||||| ||| ||||||||||||| Sbjct: 4125364 tccagcatctcctgggtctcctggatgccgccgatgc 4125400
>gb|AE004787.1| Pseudomonas aeruginosa PAO1, section 348 of 529 of the complete genome Length = 12739 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 cacctcgatgtccgccgtcac 306 ||||||||||||||||||||| Sbjct: 9326 cacctcgatgtccgccgtcac 9346
>ref|NM_003692.2| Homo sapiens transmembrane protein with EGF-like and two follistatin-like domains 1 (TMEFF1), mRNA Length = 2299 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 243 gtggtggcggcggcagcggcg 263
>gb|AF146691.1|AF146691 Lycopersicon esculentum cultivar Rio Grande ELI3 (Eli3) mRNA, partial cds Length = 990 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 ttcattgcagccttcatctcctcag 554 ||||||||||||||||||| ||||| Sbjct: 524 ttcattgcagccttcatctgctcag 500
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 112927 cgacgagctgatcaccgtcac 112947
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 15507 cgacgagctgatcaccgtcac 15527
>dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 653 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 24 cgacgagctgatcaccgtcac 4
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full insert sequence Length = 1376 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 773 cgacgagctgatcaccgtcac 753
>dbj|AK110148.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E02, full insert sequence Length = 3094 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 accatgatcatcttgccgttg 457 ||||||||||||||||||||| Sbjct: 2047 accatgatcatcttgccgttg 2027
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full insert sequence Length = 1091 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 202 cgacgagctgatcaccgtcac 182
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full insert sequence Length = 1396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 774 cgacgagctgatcaccgtcac 754
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full insert sequence Length = 1103 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 517 cgacgagctgatcaccgtcac 497
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 cgacgagctgatcaccgtcac 639 ||||||||||||||||||||| Sbjct: 767 cgacgagctgatcaccgtcac 747
>gb|AC164421.3| Mus musculus chromosome 5, clone RP24-257M14, complete sequence Length = 154470 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ctcagtggtggcggcggcagcggcg 190 |||||||| |||||||||||||||| Sbjct: 35410 ctcagtggcggcggcggcagcggcg 35386
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ggcggcggcagcggcgttgtc 195 ||||||||||||||||||||| Sbjct: 90218 ggcggcggcagcggcgttgtc 90238
>gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, complete sequence Length = 198756 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcct 551 ||||||||||||||||||||| Sbjct: 46855 tcattgcagccttcatctcct 46835
>emb|AL831766.3| Mouse DNA sequence from clone RP23-209N3 on chromosome 2, complete sequence Length = 178227 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcg 190 ||||||||||||||||||||| Sbjct: 164915 gtggtggcggcggcagcggcg 164935
>ref|XM_474129.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 477 cagtggtggcggcggcagcg 496
>ref|XM_526905.1| PREDICTED: Pan troglodytes erbb2 interacting protein (LOC471527), mRNA Length = 5001 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgt 191 |||||||||||||||||||| Sbjct: 85 ggtggcggcggcagcggcgt 104
>ref|NM_187696.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1176 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 331 catctcctgggtgtccctcatgccgccgatgcagctcccggcca 374 ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 1026 catctcctgcgtatccctcatcccgccgatcatgctcccggcca 983
>ref|XM_468507.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 256 cagtggtggcggcggcagcg 237
>ref|XM_466986.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggtggcggcggcagcggcgttgtc 195 ||||||| |||||||||||||||| Sbjct: 82 ggtggcgacggcagcggcgttgtc 59
>ref|NM_191818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 43 tcagtggtggcggcggcggcggcg 20
>ref|NM_193185.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 440 gtggtggcggcggcagcggc 459
>ref|XM_469326.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1895 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 409 tcagtggtggcggcggcggcggcg 386
>ref|XM_476843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 243 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 116 gtggtggcggcggcagcggc 97
>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529 (section 1 of 5) of the Complete Nucleotide Sequence Length = 250529 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 25488 tcattgcagccttcatctcc 25507
>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete sequence Length = 148213 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cattttcacacacacaaaat 114 |||||||||||||||||||| Sbjct: 68638 cattttcacacacacaaaat 68619
>gb|AC115040.7| Mus musculus chromosome 7, clone RP24-281E19, complete sequence Length = 172117 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gccttcatctcctcagcatc 558 |||||||||||||||||||| Sbjct: 167278 gccttcatctcctcagcatc 167297
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cattttcacacacacaaaat 114 |||||||||||||||||||| Sbjct: 70567 cattttcacacacacaaaat 70586
>ref|XM_363449.1| Magnaporthe grisea 70-15 hypothetical protein (MG01375.4) partial mRNA Length = 915 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggtggcggcggcagcggcgt 191 |||||||||||||||||||| Sbjct: 469 ggtggcggcggcagcggcgt 488
>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence Length = 141781 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aaaatgatttcagattgtttcttg 133 ||||||||||||| |||||||||| Sbjct: 98289 aaaatgatttcagtttgtttcttg 98312
>gb|AC147231.2| Mus musculus BAC clone RP23-250I21 from chromosome 9, complete sequence Length = 215395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acattttcacacacacaaaa 113 |||||||||||||||||||| Sbjct: 114259 acattttcacacacacaaaa 114278
>gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosome 19, complete sequence Length = 217325 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgctccatggccgtgttcac 270 |||||||||||||||||||| Sbjct: 135794 cgctccatggccgtgttcac 135775
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 162942 gtggtggcggcggcagcggc 162961
>ref|NM_175806.2| Bos taurus ATP6IP1 protein (ATP6IP1), mRNA Length = 2110 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tggtggcggcggcagcggcg 190 |||||||||||||||||||| Sbjct: 116 tggtggcggcggcagcggcg 135
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 atccagcatctcctgggtgt 344 |||||||||||||||||||| Sbjct: 162355 atccagcatctcctgggtgt 162374
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 26990459 tcagtggtggcggcggcggcggcg 26990482 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 331 catctcctgggtgtccctcatgccgccgatgcagctcccggcca 374 ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 6423584 catctcctgcgtatccctcatcccgccgatcatgctcccggcca 6423541
>gb|AY486478.1|AY486470S09 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 10194 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 5613 gtggtggcggcggcagcggc 5632
>ref|XM_750077.1| Aspergillus fumigatus Af293 orotidine 5'-phosphate decarboxylase (Afu2g08360) partial mRNA Length = 837 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggtattgccgatgtcgatga 218 |||||||||||||||||||| Sbjct: 306 ggtattgccgatgtcgatga 287
>ref|XM_381567.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01391.1) partial mRNA Length = 2361 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttgccgatgtcgatgacgaa 222 |||||||||||||||||||| Sbjct: 920 ttgccgatgtcgatgacgaa 939
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 59035 gtggtggcggcggcagcggc 59016
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 65266 gtggtggcggcggcagcggc 65247
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 198638 gtggtggcggcggcagcggc 198657
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 60707 gtggtggcggcggcagcggc 60688
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 65369 gtggtggcggcggcagcggc 65350
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 196083 gtggtggcggcggcagcggc 196102
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 161056 gtggtggcggcggcagcggc 161075
>ref|XM_863397.1| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing 7 isoform 1, transcript variant 3 (LOC490834), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 1586 gtggtggcggcggcagcggc 1567
>ref|XM_547956.2| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing 7 isoform 1, transcript variant 1 (LOC490834), mRNA Length = 3978 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 2630 gtggtggcggcggcagcggc 2611
>ref|XM_863393.1| PREDICTED: Canis familiaris similar to BTB (POZ) domain containing 7 isoform 1, transcript variant 2 (LOC490834), mRNA Length = 3116 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 2732 gtggtggcggcggcagcggc 2713
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 163363 gtggtggcggcggcagcggc 163382
>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight novel pseudogenes, two novel genes and three CpG islands, complete sequence Length = 181647 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 56827 tcattgcagccttcatctcc 56846
>emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chromosome 9 Contains five novel pseudogenes, a pseudogene similar to part of ribosomal protein L10 (RPL10) and two CpG islands, complete sequence Length = 182366 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 7829 tcattgcagccttcatctcc 7848
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 325 atccagcatctcctgggtgtccctcatgccgccgat 360 ||||||||| |||||||| ||| | ||||||||||| Sbjct: 2357433 atccagcatttcctgggtttccttgatgccgccgat 2357398
>emb|AL117376.28|HSDJ971B4 Human DNA sequence from clone RP5-971B4 on chromosome 20 Contains the 3' end of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 162213 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 agagaggggccatggggatg 493 |||||||||||||||||||| Sbjct: 26305 agagaggggccatggggatg 26324
>gb|AC026672.44| Homo sapiens 12 BAC RP11-876K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 230392 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 1673 tcattgcagccttcatctcc 1654
>emb|Y11303.1|AFPYRG A.fumigatus pyrG gene Length = 1896 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggtattgccgatgtcgatga 218 |||||||||||||||||||| Sbjct: 1031 ggtattgccgatgtcgatga 1012
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 161614 gtggtggcggcggcagcggc 161633
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 331 catctcctgggtgtccctcatgccgccgatgcagctcccggcca 374 ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 103710 catctcctgcgtatccctcatcccgccgatcatgctcccggcca 103667
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 104354 cagtggtggcggcggcagcg 104373
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16, complete sequence Length = 145739 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 102816 cagtggtggcggcggcagcg 102797
>gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, complete sequence Length = 181555 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 gccttcatctcctcagcatc 558 |||||||||||||||||||| Sbjct: 174975 gccttcatctcctcagcatc 174956
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tcagtggtggcggcggcagc 186 |||||||||||||||||||| Sbjct: 1533201 tcagtggtggcggcggcagc 1533220
>gb|AC099664.2| Homo sapiens chromosome 3 clone RP11-6B4, complete sequence Length = 157223 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 116 atttcagattgtttcttgttactgctaa 143 ||||||||||||||||||| || ||||| Sbjct: 136841 atttcagattgtttcttgtgacagctaa 136868
>gb|AC108128.2| Homo sapiens chromosome 5 clone RP11-755E13, complete sequence Length = 119387 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 cattgcagccttcatctcct 551 |||||||||||||||||||| Sbjct: 82038 cattgcagccttcatctcct 82057
>gb|AC023161.24| Homo sapiens 12 BAC RP11-778J16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76792 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 76459 tcattgcagccttcatctcc 76440
>gb|AC120105.3| Homo sapiens 12 BAC RP11-743I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90000 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 81904 tcattgcagccttcatctcc 81885
>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region Length = 106186 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tggtggcggcggcagcggcg 190 |||||||||||||||||||| Sbjct: 65090 tggtggcggcggcagcggcg 65109
>gb|AC022069.6| Homo sapiens, clone RP11-107K17, complete sequence Length = 169240 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cctgacatcggccttggcaa 248 |||||||||||||||||||| Sbjct: 159659 cctgacatcggccttggcaa 159640
>gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, complete sequence Length = 164958 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ttacattttcacacacacaa 111 |||||||||||||||||||| Sbjct: 50176 ttacattttcacacacacaa 50195
>gb|AC103740.2| Homo sapiens chromosome 15, clone RP11-1069G10, complete sequence Length = 182071 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tttcagattgtttcttgtta 136 |||||||||||||||||||| Sbjct: 177787 tttcagattgtttcttgtta 177768
>gb|AE012548.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 456 of 460 of the complete genome Length = 10206 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tcagtggtggcggcggcagc 186 |||||||||||||||||||| Sbjct: 530 tcagtggtggcggcggcagc 549
>gb|AC079328.11| Homo sapiens chromosome 15, clone RP11-244F12, complete sequence Length = 179402 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 tttcagattgtttcttgtta 136 |||||||||||||||||||| Sbjct: 9809 tttcagattgtttcttgtta 9790
>gb|AC116662.1| Rattus norvegicus, clone RP31-256A2, complete sequence Length = 112570 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cattttcacacacacaaaat 114 |||||||||||||||||||| Sbjct: 44682 cattttcacacacacaaaat 44663
>ref|NM_176211.1| Drosophila melanogaster muscleblind CG33197-RB, transcript variant B (mbl), mRNA Length = 3842 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgt 194 |||||||||||||||||||| Sbjct: 1814 ggcggcggcagcggcgttgt 1795
>gb|AY013325.1| Drosophila virilis strain SKT no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AY013323.1| Drosophila virilis strain B42 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AY013322.1| Drosophila virilis strain B31 no-on transient A (nonA) gene, partial cds Length = 422 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AY013321.1| Drosophila virilis strain B22 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AY013320.1| Drosophila virilis strain B15 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AY013318.1| Drosophila virilis strain A13 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 231 gtggtggcggcggcggcggcgttg 254
>gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, complete sequence Length = 186726 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccataggaagaggacttcct 49 |||||||||||||||||||| Sbjct: 76864 ccataggaagaggacttcct 76883
>gb|BC104511.1| Bos taurus ATP6IP1 protein, mRNA (cDNA clone IMAGE:8119969), partial cds Length = 2113 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tggtggcggcggcagcggcg 190 |||||||||||||||||||| Sbjct: 84 tggtggcggcggcagcggcg 103
>gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, complete sequence Length = 153873 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccataggaagaggacttcct 49 |||||||||||||||||||| Sbjct: 92453 ccataggaagaggacttcct 92472
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgt 194 |||||||||||||||||||| Sbjct: 73948 ggcggcggcagcggcgttgt 73929
>gb|AC160341.2| Mus musculus BAC clone RP24-226P13 from chromosome 9, complete sequence Length = 139613 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 atccagcatctcctgggtgt 344 |||||||||||||||||||| Sbjct: 76491 atccagcatctcctgggtgt 76472
>gb|AC159622.2| Mus musculus BAC clone RP24-289D12 from chromosome 12, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 43793 gtggtggcggcggcagcggc 43774
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tcagtggtggcggcggcagc 186 |||||||||||||||||||| Sbjct: 5099964 tcagtggtggcggcggcagc 5099983
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 4175484 gtggtggcggcggcagcggc 4175465
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 18940433 cagtggtggcggcggcagcg 18940414
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 27081782 tcagtggtggcggcggcggcggcg 27081805 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 331 catctcctgggtgtccctcatgccgccgatgcagctcccggcca 374 ||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 6422797 catctcctgcgtatccctcatcccgccgatcatgctcccggcca 6422754
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 30123663 tcagtggtggcggcggcggcggcg 30123640 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 19118431 gtggtggcggcggcagcggc 19118450
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 224675 gtggtggcggcggcagcggc 224694
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 68940 tcagtggtggcggcggcggcggcg 68917
>gb|AC010359.5|AC010359 Homo sapiens chromosome 5 clone CTD-2033C11, complete sequence Length = 204843 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggtggcggcggcagcggcgt 191 |||||||||||||||||||| Sbjct: 153405 ggtggcggcggcagcggcgt 153386
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 83848 gtggtggcggcggcagcggc 83867
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 28485 tcagtggtggcggcggcggcggcg 28462
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 119653 tcagtggtggcggcggcggcggcg 119630
>gb|AC121320.7| Homo sapiens chromosome 18, clone RP11-25D3, complete sequence Length = 81386 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cctgacatcggccttggcaa 248 |||||||||||||||||||| Sbjct: 58089 cctgacatcggccttggcaa 58070
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 618 gcgacgagctgatcaccgtc 637 |||||||||||||||||||| Sbjct: 2008900 gcgacgagctgatcaccgtc 2008919
>gb|AC151826.8| Monodelphis domestica, clone XX-25F7, complete sequence Length = 152619 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggtttacattttcacacaca 108 |||||||||||||||||||| Sbjct: 145979 ggtttacattttcacacaca 145960
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tggtggcggcggcagcggcg 190 |||||||||||||||||||| Sbjct: 7340 tggtggcggcggcagcggcg 7359
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 105981 cagtggtggcggcggcagcg 106000
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 105998 cagtggtggcggcggcagcg 105979
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 33103 cagtggtggcggcggcagcg 33084
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 tcctcagcatccttgctgacaacg 571 |||||||||||||||| ||||||| Sbjct: 5880364 tcctcagcatccttgccgacaacg 5880341
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 325 atccagcatctcctgggtgtccctcatgccgccgat 360 |||||||||||||||||| ||| ||||||||||| Sbjct: 368470 atccagcatctcctgggtctccgggatgccgccgat 368505
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 59106 gtggtggcggcggcagcggc 59087
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggtggcggcggcagcggcgttgtc 195 ||||||| |||||||||||||||| Sbjct: 151772 ggtggcgacggcagcggcgttgtc 151749
>dbj|AK120860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024G08, full insert sequence Length = 2232 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tcagtggtggcggcggcagcggcg 190 ||||||||||||||||| |||||| Sbjct: 457 tcagtggtggcggcggcggcggcg 434
>dbj|AK106833.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-F12, full insert sequence Length = 1732 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 ggtggcggcggcagcggcgttgtc 195 ||||||| |||||||||||||||| Sbjct: 82 ggtggcgacggcagcggcgttgtc 59
>dbj|AK102885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112J11, full insert sequence Length = 3195 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 90 gtggtggcggcggcagcggc 71
>emb|AL845324.16| Zebrafish DNA sequence from clone CH211-122L14 in linkage group 20, complete sequence Length = 160892 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 tacattttcacacacacaaa 112 |||||||||||||||||||| Sbjct: 6399 tacattttcacacacacaaa 6380
>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence Length = 209547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cgctccatggccgtgttcac 270 |||||||||||||||||||| Sbjct: 164161 cgctccatggccgtgttcac 164180
>emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-689J19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170588 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 135930 tcattgcagccttcatctcc 135949
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgt 194 |||||||||||||||||||| Sbjct: 93966 ggcggcggcagcggcgttgt 93947
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcggcggcagcggcgttgtc 195 |||||||||||||||||||| Sbjct: 1828896 gcggcggcagcggcgttgtc 1828915
>gb|AF001626.1|DMAF001626 Drosophila melanogaster muscleblind B (mbl) mRNA, alternatively spliced, complete cds Length = 3846 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggcggcggcagcggcgttgt 194 |||||||||||||||||||| Sbjct: 1822 ggcggcggcagcggcgttgt 1803
>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14, complete sequence Length = 171108 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 caaaatgatttcagattgtt 128 |||||||||||||||||||| Sbjct: 49036 caaaatgatttcagattgtt 49017
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cagtggtggcggcggcagcg 187 |||||||||||||||||||| Sbjct: 31895 cagtggtggcggcggcagcg 31876
>emb|CT009664.17| Pig DNA sequence from clone CH242-113D8 on chromosome 7, complete sequence Length = 182046 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggcgttg 193 |||||||||||||| ||||||||| Sbjct: 102829 gtggtggcggcggcggcggcgttg 102852
>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete sequence Length = 227692 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 ttcattgcagccttcatctc 549 |||||||||||||||||||| Sbjct: 151960 ttcattgcagccttcatctc 151979
>gb|AC111009.5| Mus musculus BAC clone RP23-418A13 from 9, complete sequence Length = 194287 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acattttcacacacacaaaa 113 |||||||||||||||||||| Sbjct: 48631 acattttcacacacacaaaa 48650
>emb|CR956380.6| Pig DNA sequence from clone PigE-182G21 on chromosome 17, complete sequence Length = 91578 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 50557 gtggtggcggcggcagcggc 50576
>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14 Length = 1071646 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 tcattgcagccttcatctcc 550 |||||||||||||||||||| Sbjct: 25488 tcattgcagccttcatctcc 25507
>gb|U57434.1|HCU57434 Human cytomegalovirus early phosphoprotein p43 mRNA, complete cds Length = 1939 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 900 gtggtggcggcggcagcggc 919
>gb|U57433.1|HCU57433 Human cytomegalovirus early phosphoprotein p34 mRNA, complete cds Length = 2401 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 1081 gtggtggcggcggcagcggc 1100
>gb|U57432.1|HCU57432 Human cytomegalovirus early phosphoprotein p84 mRNA, complete cds Length = 2253 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 933 gtggtggcggcggcagcggc 952
>gb|U57431.1|HCU57431 Human cytomegalovirus early phosphoprotein p50 mRNA, complete cds Length = 1831 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 914 gtggtggcggcggcagcggc 933
>gb|U10039.1|BTU10039 Bos taurus vacuolar H+ ATPase subunit Ac45 mRNA, complete cds Length = 2110 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tggtggcggcggcagcggcg 190 |||||||||||||||||||| Sbjct: 116 tggtggcggcggcagcggcg 135
>dbj|D26511.1|HS5PP34 Human cytomegalovirus genes for phosphoproteins pp34 and pp43, complete cds Length = 1634 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtggtggcggcggcagcggc 189 |||||||||||||||||||| Sbjct: 1124 gtggtggcggcggcagcggc 1143 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,106,216 Number of Sequences: 3902068 Number of extensions: 6106216 Number of successful extensions: 156830 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154253 Number of HSP's gapped (non-prelim): 2570 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
