Clone Name	rbasd26o10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	797	0.0
2	ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA	638	e-180
3	ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA	638	e-180
4	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	638	e-180
5	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	638	e-180
6	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	638	e-180
7	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	638	e-180
8	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	638	e-180
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
10	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
11	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
12	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	638	e-180
13	ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA	630	e-177
14	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
16	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
17	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
18	dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
19	dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D...	630	e-177
20	dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clon...	630	e-177
21	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	624	e-176
22	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	624	e-176
23	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	624	e-176
24	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	624	e-176
25	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	525	e-146
26	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	525	e-146
27	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	517	e-143
28	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	517	e-143
29	emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal...	511	e-142
30	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	507	e-140
31	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	424	e-115
32	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	424	e-115
33	emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa...	424	e-115
34	emb|Y00340.1|CHZMRPS3 Maize chloroplast rps3 gene for ribosomal ...	200	4e-48
35	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	182	1e-42
36	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	182	1e-42
37	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	182	1e-42
38	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	182	1e-42
39	emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clon...	141	3e-30
40	gb|DQ069461.1| Typha latifolia ribosomal protein S3 (rps3) gene,...	139	1e-29
41	gb|DQ069462.1| Yucca schidigera ribosomal protein S3 (rps3) gene...	137	5e-29
42	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	133	8e-28
43	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	129	1e-26
44	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	127	5e-26
45	gb|AY582139.1| Panax ginseng chloroplast, complete genome	125	2e-25
46	gb|DQ069459.1| Nuphar advena ribosomal protein S3 (rps3) gene, p...	123	8e-25
47	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	119	1e-23
48	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	117	5e-23
49	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	117	5e-23
50	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	117	5e-23
51	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	117	5e-23
52	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	117	5e-23
53	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	113	7e-22
54	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	113	7e-22
55	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	113	7e-22
56	gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer...	111	3e-21
57	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	109	1e-20
58	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	109	1e-20
59	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	109	1e-20
60	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	109	1e-20
61	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	107	5e-20
62	gb|DQ069457.1| Acorus americanus ribosomal protein S3 (rps3) gen...	105	2e-19
63	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	105	2e-19
64	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	105	2e-19
65	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	101	3e-18
66	gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trn...	100	1e-17
67	gb|DQ069460.1| Ranunculus macranthus ribosomal protein S3 (rps3)...	98	4e-17
68	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	98	4e-17
69	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	96	2e-16
70	gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, part...	96	2e-16
71	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	94	7e-16
72	gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nippon...	94	7e-16
73	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
74	dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic D...	94	7e-16
75	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	92	3e-15
76	emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19,...	90	1e-14
77	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	90	1e-14
78	gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, par...	88	4e-14
79	gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA...	88	4e-14
80	emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP...	86	2e-13
81	emb|AJ560717.1|OMI560717 Orobanche minor chloroplast rps19 gene ...	84	7e-13
82	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	84	7e-13
83	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	84	7e-13
84	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	82	3e-12
85	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	82	3e-12
86	gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete s...	76	2e-10
87	gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial ...	76	2e-10
88	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	76	2e-10
89	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	74	6e-10
90	gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite se...	68	4e-08
91	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	64	6e-07
92	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	60	9e-06
93	gb|DQ069458.1| Ginkgo biloba ribosomal protein S3 (rps3) gene, p...	58	4e-05
94	gb|U92462.1|PAU92462 Picea abies ribosomal protein L16 (rpl16) p...	58	4e-05
95	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	58	4e-05
96	dbj|AB087471.1| Anthoceros formosae chloroplast rps3, rpl22 mRNA...	56	1e-04
97	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	56	1e-04
98	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	56	1e-04
99	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	56	1e-04
100	gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome...	50	0.009
101	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
102	gb|AF041468.1| Guillardia theta complete plastid genome	46	0.14
103	gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase r...	44	0.56
104	gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH...	44	0.56
105	gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH ...	44	0.56
106	gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH ...	44	0.56
107	emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4,...	44	0.56
108	gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein ...	44	0.56
109	gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitroge...	42	2.2
110	gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section...	42	2.2
111	gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenas...	42	2.2
112	gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenas...	42	2.2
113	gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenas...	42	2.2
114	gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenas...	42	2.2
115	gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase ...	42	2.2
116	gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase ...	42	2.2
117	gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase ...	42	2.2
118	gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase ...	42	2.2
119	gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase ...	42	2.2
120	gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase ...	42	2.2
121	gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH...	42	2.2
122	gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH ...	42	2.2
123	gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase ...	42	2.2
124	gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogen...	42	2.2
125	gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (...	42	2.2
126	gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (n...	42	2.2
127	gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, ...	42	2.2
128	gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW1...	42	2.2
129	gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, co...	42	2.2
130	emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
131	emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
132	emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
133	emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
134	emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
135	emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinit...	42	2.2
136	emb|BX927234.8| Zebrafish DNA sequence from clone CH211-196N4 in...	42	2.2
137	gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein...	42	2.2
138	gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-l...	42	2.2
139	gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (...	42	2.2
140	gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (...	42	2.2
141	gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-l...	42	2.2
142	gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein ...	42	2.2
143	gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein...	42	2.2
144	gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein ...	42	2.2
145	emb|BX323543.11| Zebrafish DNA sequence from clone DKEYP-67E1 in...	42	2.2
146	dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitroge...	42	2.2
147	dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein ...	42	2.2
148	gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) ...	42	2.2
149	gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH...	42	2.2
150	gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) ...	42	2.2
151	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	42	2.2
152	dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for di...	42	2.2
153	gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa di...	42	2.2
154	gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa di...	42	2.2
155	gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr...	42	2.2
156	gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrog...	42	2.2
157	gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone...	42	2.2
158	gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#0...	42	2.2
159	gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#0...	42	2.2
160	gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#0...	42	2.2
161	gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#0...	42	2.2
162	gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#0...	42	2.2
163	gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#0...	42	2.2
164	gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reduct...	42	2.2
165	gb|AF115283.1|AF115283 Leptospira interrogans S10-spc-alpha locu...	42	2.2
166	gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 ...	42	2.2
167	gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 ...	42	2.2
168	gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 ...	42	2.2
169	gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 ...	42	2.2
170	gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 ...	42	2.2
171	emb|CR792419.10| Zebrafish DNA sequence from clone DKEY-11A2 in ...	42	2.2
172	gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F...	42	2.2
173	gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase ir...	40	8.8
174	gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrog...	40	8.8
175	gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase ir...	40	8.8
176	gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase red...	40	8.8
177	gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, co...	40	8.8
178	gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, comp...	40	8.8
179	gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete s...	40	8.8
180	gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogen...	40	8.8
181	gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogen...	40	8.8
182	gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitroge...	40	8.8
183	gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitroge...	40	8.8
184	gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenas...	40	8.8
185	gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenas...	40	8.8
186	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	40	8.8
187	gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase r...	40	8.8
188	gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a...	40	8.8
189	gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reducta...	40	8.8
190	gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reducta...	40	8.8
191	gb|AY581120.1| Sitobion avenae cell division cycle protein 42 (c...	40	8.8
192	gb|AY574638.1| Rhopalosiphum padi Rho family small GTP binding p...	40	8.8
193	gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogena...	40	8.8
194	gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3...	40	8.8
195	gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9...	40	8.8
196	gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8...	40	8.8
197	gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5...	40	8.8
198	gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3...	40	8.8
199	gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2...	40	8.8
200	gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW1...	40	8.8
201	gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1...	40	8.8
202	gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome...	40	8.8
203	gb|AY458644.1| Uncultured bacterium 562 clone EBAC000-45B06 geno...	40	8.8
204	emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in ...	40	8.8
205	gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosom...	40	8.8
206	emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 ...	40	8.8
207	gb|AY372454.1| Uncultured marine gamma proteobacterium EB000-45B...	40	8.8
208	emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on ch...	40	8.8
209	emb|AL356374.13| Human DNA sequence from clone RP11-454P17 on ch...	40	8.8
210	emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E1...	40	8.8
211	emb|Z47547.1|MTCCGNME Chondrus crispus complete mitochondrial ge...	40	8.8
212	gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete seq...	40	8.8
213	dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protei...	40	8.8
214	gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 din...	40	8.8
215	gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 din...	40	8.8
216	gb|DQ413230.1| Acyrthosiphon pisum isolate WHAP0364 putative Rho...	40	8.8
217	gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH...	40	8.8
218	gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH...	40	8.8
219	gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH...	40	8.8
220	gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH...	40	8.8
221	gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH...	40	8.8
222	gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH...	40	8.8
223	gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH...	40	8.8
224	gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH...	40	8.8
225	gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH)...	40	8.8
226	gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH)...	40	8.8
227	gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH)...	40	8.8
228	gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH)...	40	8.8
229	gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH)...	40	8.8
230	gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH)...	40	8.8
231	gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH)...	40	8.8
232	gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH)...	40	8.8
233	gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH)...	40	8.8
234	gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrog...	40	8.8
235	gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein...	40	8.8
236	gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clo...	40	8.8
237	dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu...	40	8.8
238	emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on ch...	40	8.8
239	gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete se...	40	8.8
240	gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21...	40	8.8
241	gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' n...	40	8.8
242	gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' n...	40	8.8
243	emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chr...	40	8.8
244	gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complet...	40	8.8
245	gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold	40	8.8

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  797 bits (402), Expect = 0.0
 Identities = 430/442 (97%)
 Strand = Plus / Plus

                                                                         
Query: 204   agatttctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaa 263
             ||||||||||||||||||||||||||||||||||||||||||||        || |||||
Sbjct: 79877 agatttctttactatatttagtacaattgttatatgacacatgcttttttttatggggaa 79936

                                                                         
Query: 264   actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 323
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79937 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 79996

                                                                         
Query: 324   tttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgc 383
             ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 79997 tttagtaataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgc 80056

                                                                         
Query: 384   cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 443
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80057 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 80116

                                                                         
Query: 444   aacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaac 503
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 80117 aacagtttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaac 80176

                                                                         
Query: 504   agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 563
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80177 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 80236

                                                                         
Query: 564   tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 623
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80237 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 80296

                                   
Query: 624   ctttactagtttgaaacttgtc 645
             ||||||||||||||||||||||
Sbjct: 80297 ctttactagtttgaaacttgtc 80318



 Score =  220 bits (111), Expect = 4e-54
 Identities = 139/150 (92%), Gaps = 1/150 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79727 cttcctgtagaccttccgaataattttttggttgtgcgaaccaaaaggaatggtgttttt 79786

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79787 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctattcta 79846

                                           
Query: 154   tannnnnnnnnactgggaatcgaaatctta 183
             ||         |||||||||||||||||||
Sbjct: 79847 tatttttttttactgggaatcgaaatctta 79876

---

>ref|XM_481016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
           ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748

                                                                       
Query: 236 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
           |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688

                                                                       
Query: 296 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628

                                                                       
Query: 356 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568

                                                                       
Query: 416 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
           ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508

                                                                       
Query: 476 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
           | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448

                                                                       
Query: 536 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
           | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388

                                                             
Query: 596 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
           | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 387 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 338



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 945 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 886

                                                                       
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
           |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 885 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 826

            
Query: 154 t 154
           |
Sbjct: 825 t 825

---

>ref|XM_481017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2472

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
           ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748

                                                                       
Query: 236 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
           |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688

                                                                       
Query: 296 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628

                                                                       
Query: 356 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568

                                                                       
Query: 416 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
           ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508

                                                                       
Query: 476 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
           | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448

                                                                       
Query: 536 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
           | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388

                                                             
Query: 596 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
           | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 387 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 338



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 945 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 886

                                                                       
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
           |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 885 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 826

            
Query: 154 t 154
           |
Sbjct: 825 t 825

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 80109 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80168

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 80169 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80228

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 80229 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80288

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80289 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80348

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 80349 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80408

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 80409 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80468

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 80469 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80528

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80529 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 80578



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79971 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 80030

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80031 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 80090

              
Query: 154   t 154
             |
Sbjct: 80091 t 80091

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 80109 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80168

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 80169 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80228

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 80229 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80288

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80289 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80348

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 80349 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80408

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 80409 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80468

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 80469 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80528

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80529 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 80578



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79971 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 80030

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80031 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 80090

              
Query: 154   t 154
             |
Sbjct: 80091 t 80091

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 80052 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80111

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 80112 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80171

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 80172 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80231

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80232 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80291

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 80292 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80351

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 80352 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80411

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 80412 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80471

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80472 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 80521



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79914 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 79973

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79974 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 80033

              
Query: 154   t 154
             |
Sbjct: 80034 t 80034

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 80097 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80156

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 80157 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80216

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 80217 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80276

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80277 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80336

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 80337 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80396

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 80397 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80456

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 80457 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80516

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80517 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 80566



 Score =  194 bits (98), Expect = 3e-46
 Identities = 114/118 (96%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79958 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 80017

                                                                       
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattc 151
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 80018 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattc 80075

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 70645 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 70586

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 70585 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 70526

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 70525 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 70466

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70465 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 70406

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 70405 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 70346

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 70345 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 70286

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 70285 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 70226

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 70225 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 70176



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70783 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 70724

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70723 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 70664

              
Query: 154   t 154
             |
Sbjct: 70663 t 70663

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                           
Query: 176     aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
               ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 9212532 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9212591

                                                                           
Query: 236     tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
               |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 9212592 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9212651

                                                                           
Query: 296     tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
               |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 9212652 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9212711

                                                                           
Query: 356     ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
               ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9212712 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9212771

                                                                           
Query: 416     ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
               ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 9212772 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9212831

                                                                           
Query: 476     cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
               | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 9212832 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9212891

                                                                           
Query: 536     ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
               | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 9212892 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9212951

                                                                 
Query: 596     ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
               | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 9212952 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 9213001



 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                           
Query: 176     aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
               ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 9189572 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9189513

                                                                           
Query: 236     tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
               |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 9189512 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9189453

                                                                           
Query: 296     tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
               |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 9189452 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9189393

                                                                           
Query: 356     ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
               ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9189392 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9189333

                                                                           
Query: 416     ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
               ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 9189332 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9189273

                                                                           
Query: 476     cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
               | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 9189272 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9189213

                                                                           
Query: 536     ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
               | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 9189212 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9189153

                                                                 
Query: 596     ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
               | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 9189152 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 9189103



 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                           
Query: 176     aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
               ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 9112619 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9112560

                                                                           
Query: 236     tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
               |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 9112559 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9112500

                                                                           
Query: 296     tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
               |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 9112499 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9112440

                                                                           
Query: 356     ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
               ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9112439 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9112380

                                                                           
Query: 416     ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
               ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 9112379 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9112320

                                                                           
Query: 476     cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
               | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 9112319 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9112260

                                                                           
Query: 536     ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
               | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 9112259 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9112200

                                                                 
Query: 596     ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
               | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 9112199 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 9112150



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                           
Query: 35      cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9189710 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 9189651

                                                                           
Query: 94      gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
               |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9189650 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 9189591

                
Query: 154     t 154
               |
Sbjct: 9189590 t 9189590



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                           
Query: 35      cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9112757 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 9112698

                                                                           
Query: 94      gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
               |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9112697 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 9112638

                
Query: 154     t 154
               |
Sbjct: 9112637 t 9112637



 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                            
Query: 386      aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 445
                ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426

                                               
Query: 446      cagtttcctcgtagtaacgccaccgaatctc 476
                 |||||| |||||||||||||| ||||||||
Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                                 
Query: 121     gatttattttttgtcccatatttttctattctat 154
               ||||||||||||||||||||||||||||||||||
Sbjct: 9212481 gatttattttttgtcccatatttttctattctat 9212514



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 347      tgtcgaaatccctataatgagttgcatttg 376
                ||||||||||| |||||||||| |||||||
Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                           
Query: 176     aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
               ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 9256962 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 9256903

                                                                           
Query: 236     tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
               |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 9256902 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9256843

                                                                           
Query: 296     tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
               |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 9256842 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9256783

                                                                           
Query: 356     ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
               ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9256782 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9256723

                                                                           
Query: 416     ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
               ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 9256722 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9256663

                                                                           
Query: 476     cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
               | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 9256662 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9256603

                                                                           
Query: 536     ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
               | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 9256602 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9256543

                                                                 
Query: 596     ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
               | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 9256542 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 9256493



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                           
Query: 35      cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
               |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 9257100 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 9257041

                                                                           
Query: 94      gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
               |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9257040 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 9256981

                
Query: 154     t 154
               |
Sbjct: 9256980 t 9256980

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Minus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 68175 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 68116

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 68115 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 68056

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 68055 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 67996

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 67995 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 67936

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 67935 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 67876

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 67875 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 67816

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 67815 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 67756

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 67755 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 67706



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 68313 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 68254

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 68253 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 68194

              
Query: 154   t 154
             |
Sbjct: 68193 t 68193

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  638 bits (322), Expect = e-180
 Identities = 431/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 80049 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80108

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 80109 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80168

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 80169 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80228

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80229 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80288

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 80289 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80348

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 80349 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80408

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 80409 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80468

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 80469 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 80518



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 79911 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 79970

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79971 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 80030

              
Query: 154   t 154
             |
Sbjct: 80031 t 80031

---

>ref|XM_479425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2380

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
           ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 714 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 655

                                                                       
Query: 236 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
           |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 654 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 595

                                                                       
Query: 296 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 594 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 535

                                                                       
Query: 356 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
           ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 534 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 475

                                                                       
Query: 416 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
           ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 474 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 415

                                                                       
Query: 476 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
           | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 414 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 355

                                                                       
Query: 536 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
           | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 354 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 295

                                                             
Query: 596 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
           | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 294 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 245



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 852 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 793

                                                                       
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
           |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 792 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 733

            
Query: 154 t 154
           |
Sbjct: 732 t 732

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Minus

                                                                            
Query: 176      aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 14453591 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 14453532

                                                                            
Query: 236      tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
                |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 14453531 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 14453472

                                                                            
Query: 296      tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
                |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 14453471 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 14453412

                                                                            
Query: 356      ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
                ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 14453411 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 14453352

                                                                            
Query: 416      ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
                ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 14453351 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 14453292

                                                                            
Query: 476      cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
                | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 14453291 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 14453232

                                                                            
Query: 536      ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
                | |  |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 14453231 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 14453172

                                                                  
Query: 596      ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
                | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 14453171 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 14453122



 Score =  507 bits (256), Expect = e-140
 Identities = 351/382 (91%), Gaps = 3/382 (0%)
 Strand = Plus / Minus

                                                                            
Query: 263      aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
                |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655

                                                                            
Query: 323      ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
                ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595

                                                                            
Query: 383      ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
                |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535

                                                                            
Query: 443      taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
                |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475

                                                                            
Query: 503      cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
                | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415

                                                                            
Query: 563      ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
                |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355

                                      
Query: 623      actttactagtttgaaacttgt 644
                ||||||| ||||||||||||||
Sbjct: 11893354 actttaccagtttgaaacttgt 11893333



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                            
Query: 35       cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 14453728 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 14453669

                                                                            
Query: 94       gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 14453668 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 14453609

                 
Query: 154      t 154
                |
Sbjct: 14453608 t 14453608



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                            
Query: 35       cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11893936 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 11893877

                                                                            
Query: 94       gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11893876 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 11893817

                 
Query: 154      t 154
                |
Sbjct: 11893816 t 11893816



 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                            
Query: 176      aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 11893799 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 11893740

                           
Query: 236      tatgacacatg 246
                |||||||||||
Sbjct: 11893739 tatgacacatg 11893729

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Plus

                                                                            
Query: 176      aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 27925582 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 27925641

                                                                            
Query: 236      tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
                |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 27925642 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 27925701

                                                                            
Query: 296      tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
                |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 27925702 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 27925761

                                                                            
Query: 356      ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
                ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 27925762 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 27925821

                                                                            
Query: 416      ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
                ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 27925822 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 27925881

                                                                            
Query: 476      cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
                | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 27925882 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 27925941

                                                                            
Query: 536      ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
                | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 27925942 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 27926001

                                                                  
Query: 596      ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
                | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 27926002 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 27926051



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                            
Query: 35       cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 27925444 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 27925503

                                                                            
Query: 94       gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 27925504 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 27925563

                 
Query: 154      t 154
                |
Sbjct: 27925564 t 27925564



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                            
Query: 331      atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 390
                ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825

                       
Query: 391      accaact 397
                |||||||
Sbjct: 10159824 accaact 10159818



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                            
Query: 424      ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 483
                ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750

                                                                      
Query: 484      actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 536
                |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 88940 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 88999

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 89000 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 89059

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 89060 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 89119

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 89120 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 89179

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 89180 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 89239

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 89240 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 89299

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 89300 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 89359

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 89360 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 89409



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 88802 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 88861

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 88862 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 88921

              
Query: 154   t 154
             |
Sbjct: 88922 t 88922

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 14916 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 14975

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 14976 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 15035

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 15036 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 15095

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 15096 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 15155

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 15156 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 15215

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 15216 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 15275

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 15276 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 15335

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 15336 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 15385



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 14778 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 14837

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 14838 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 14897

              
Query: 154   t 154
             |
Sbjct: 14898 t 14898

---

>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0465E03
          Length = 151206

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Minus

                                                                          
Query: 176    aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
              ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 145394 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 145335

                                                                          
Query: 236    tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
              |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 145334 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 145275

                                                                          
Query: 296    tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
              |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 145274 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 145215

                                                                          
Query: 356    ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
              ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 145214 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 145155

                                                                          
Query: 416    ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
              ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 145154 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 145095

                                                                          
Query: 476    cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
              | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 145094 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 145035

                                                                          
Query: 536    ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
              | |  |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 145034 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 144975

                                                                
Query: 596    ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
              | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 144974 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 144925



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                          
Query: 35     cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 145531 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 145472

                                                                          
Query: 94     gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
              |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 145471 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 145412

               
Query: 154    t 154
              |
Sbjct: 145411 t 145411

---

>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Minus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 53156 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 53097

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 53096 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 53037

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 53036 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 52977

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 52976 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 52917

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 52916 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 52857

                                                                         
Query: 476   cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
             | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 52856 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 52797

                                                                         
Query: 536   ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
             | |  |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 52796 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 52737

                                                               
Query: 596   ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             | ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 52736 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 52687



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 53293 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 53234

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 53233 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 53174

              
Query: 154   t 154
             |
Sbjct: 53173 t 53173

---

>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full
           insert sequence
          Length = 2475

 Score =  630 bits (318), Expect = e-177
 Identities = 430/470 (91%)
 Strand = Plus / Minus

                                                                       
Query: 176 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
           ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748

                                                                       
Query: 236 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
           |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688

                                                                       
Query: 296 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628

                                                                       
Query: 356 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
           ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568

                                                                       
Query: 416 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
           ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508

                                                                       
Query: 476 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 535
           | || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||
Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448

                                                                       
Query: 536 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 595
           | |  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388

                                                             
Query: 596 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
           | ||||||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct: 387 tcttcttcttccttatcctaggggtatactttaccagtttgaaacttgtc 338



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 945 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 886

                                                                       
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
           |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 885 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 826

            
Query: 154 t 154
           |
Sbjct: 825 t 825

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  624 bits (315), Expect = e-176
 Identities = 431/471 (91%), Gaps = 1/471 (0%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 78290 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 78349

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 78350 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 78409

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 78410 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 78469

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78470 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 78529

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 78530 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 78589

                                                                         
Query: 476   cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 534
             | || ||||||| ||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 78590 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 78649

                                                                         
Query: 535   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 594
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 78650 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 78709

                                                                
Query: 595   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             || ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 78710 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 78760



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 78151 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 78210

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78211 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 78270

              
Query: 154   t 154
             |
Sbjct: 78271 t 78271

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  624 bits (315), Expect = e-176
 Identities = 431/471 (91%), Gaps = 1/471 (0%)
 Strand = Plus / Plus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 12354 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 12413

                                                                         
Query: 236   tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
             |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 12414 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 12473

                                                                         
Query: 296   tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
             |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 12474 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 12533

                                                                         
Query: 356   ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12534 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 12593

                                                                         
Query: 416   ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 12594 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 12653

                                                                         
Query: 476   cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 534
             | || ||||||| ||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 12654 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 12713

                                                                         
Query: 535   actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 594
             || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 12714 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 12773

                                                                
Query: 595   cttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
             || ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 12774 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 12824



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12215 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 12274

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12275 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 12334

              
Query: 154   t 154
             |
Sbjct: 12335 t 12335

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  624 bits (315), Expect = e-176
 Identities = 431/471 (91%), Gaps = 1/471 (0%)
 Strand = Plus / Plus

                                                                            
Query: 176      aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 10371898 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 10371957

                                                                            
Query: 236      tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
                |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 10371958 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 10372017

                                                                            
Query: 296      tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
                |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 10372018 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 10372077

                                                                            
Query: 356      ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
                ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10372078 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 10372137

                                                                            
Query: 416      ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
                ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 10372138 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 10372197

                                                                            
Query: 476      cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 534
                | || ||||||| ||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 10372198 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 10372257

                                                                            
Query: 535      actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 594
                || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 10372258 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 10372317

                                                                   
Query: 595      cttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
                || ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 10372318 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 10372368



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                            
Query: 35       cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10371759 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 10371818

                                                                            
Query: 94       gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10371819 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 10371878

                 
Query: 154      t 154
                |
Sbjct: 10371879 t 10371879

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  624 bits (315), Expect = e-176
 Identities = 431/471 (91%), Gaps = 1/471 (0%)
 Strand = Plus / Plus

                                                                            
Query: 176      aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
                ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 10377937 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 10377996

                                                                            
Query: 236      tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 295
                |||||||||||         || ||  |||||||||||||||| |||||||||||||| |
Sbjct: 10377997 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 10378056

                                                                            
Query: 296      tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 355
                |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 10378057 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 10378116

                                                                            
Query: 356      ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 415
                ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10378117 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 10378176

                                                                            
Query: 416      ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
                ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||
Sbjct: 10378177 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 10378236

                                                                            
Query: 476      cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 534
                | || ||||||| ||||| |||||||||| |||||  |||| ||||||||||||||||||
Sbjct: 10378237 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 10378296

                                                                            
Query: 535      actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 594
                || |  |||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 10378297 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 10378356

                                                                   
Query: 595      cttttcttcttctttatcctagggatatactttactagtttgaaacttgtc 645
                || ||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 10378357 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtc 10378407



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                            
Query: 35       cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 10377798 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 10377857

                                                                            
Query: 94       gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
                |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10377858 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 10377917

                 
Query: 154      t 154
                |
Sbjct: 10377918 t 10377918

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  525 bits (265), Expect = e-146
 Identities = 354/383 (92%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153

                                                                         
Query: 503   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213

                                                                         
Query: 563   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270

                                    
Query: 623   actttactagtttgaaacttgtc 645
             ||||||| | |||||||||||||
Sbjct: 82271 actttaccaatttgaaacttgtc 82293



 Score =  200 bits (101), Expect = 4e-48
 Identities = 114/117 (97%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 81682 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 81741

                                                                      
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctatt 150
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 81742 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctatt 81798



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                         
Query: 165   actgggaatcgaaatcttagatggatctaaaggttatttagatttctttactatatttag 224
             |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 81816 actgggaatcgaaatcttagattgatctaaagattattttgatttctttactatatttag 81875

                                  
Query: 225   tacaattgttatatgacacat 245
             |||||||||||||| ||||||
Sbjct: 81876 tacaattgttatattacacat 81896

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  525 bits (265), Expect = e-146
 Identities = 354/383 (92%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183

                                                                         
Query: 503   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243

                                                                         
Query: 563   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300

                                    
Query: 623   actttactagtttgaaacttgtc 645
             ||||||| | |||||||||||||
Sbjct: 82301 actttaccaatttgaaacttgtc 82323



 Score =  200 bits (101), Expect = 4e-48
 Identities = 114/117 (97%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 81712 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 81771

                                                                      
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctatt 150
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 81772 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctatt 81828



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                         
Query: 165   actgggaatcgaaatcttagatggatctaaaggttatttagatttctttactatatttag 224
             |||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 81846 actgggaatcgaaatcttagattgatctaaagattattttgatttctttactatatttag 81905

                                  
Query: 225   tacaattgttatatgacacat 245
             |||||||||||||| ||||||
Sbjct: 81906 tacaattgttatattacacat 81926

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  517 bits (261), Expect = e-143
 Identities = 353/383 (92%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                        
Query: 263  aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112

                                                                        
Query: 323  ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
            ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172

                                                                        
Query: 383  ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
            |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232

                                                                        
Query: 443  taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
            |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292

                                                                        
Query: 503  cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
            |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352

                                                                        
Query: 563  ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
            |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409

                                   
Query: 623  actttactagtttgaaacttgtc 645
            ||||||| | |||||||||||||
Sbjct: 3410 actttaccaatttgaaacttgtc 3432



 Score =  200 bits (101), Expect = 4e-48
 Identities = 114/117 (97%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                        
Query: 35   cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2823 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 2882

                                                                     
Query: 94   gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctatt 150
            |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2883 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctatt 2939



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                        
Query: 165  actgggaatcgaaatcttagatggatctaaaggttatttagatttctttactatatttag 224
            ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 2955 actgggaatcgaaattttagattgatctaaagattatttagatttctttactatatttag 3014

                                 
Query: 225  tacaattgttatatgacacat 245
            |||||||||||||| ||||||
Sbjct: 3015 tacaattgttatattacacat 3035

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  517 bits (261), Expect = e-143
 Identities = 353/383 (92%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| ||||
Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             |||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849

                                                                         
Query: 503   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
             |||||||| | || |||||||||||||||||||| |  ||||| ||||||||||||||||
Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909

                                                                         
Query: 563   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
             |||||||||| ||||||||||| || |||||    ||||||||||||||||||||| |||
Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966

                                    
Query: 623   actttactagtttgaaacttgtc 645
             ||||||| | |||||||||||||
Sbjct: 82967 actttaccaatttgaaacttgtc 82989



 Score =  200 bits (101), Expect = 4e-48
 Identities = 114/117 (97%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 82380 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 82439

                                                                      
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctatt 150
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 82440 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctatt 82496



 Score =  129 bits (65), Expect = 1e-26
 Identities = 77/81 (95%)
 Strand = Plus / Plus

                                                                         
Query: 165   actgggaatcgaaatcttagatggatctaaaggttatttagatttctttactatatttag 224
             ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 82512 actgggaatcgaaattttagattgatctaaagattatttagatttctttactatatttag 82571

                                  
Query: 225   tacaattgttatatgacacat 245
             |||||||||||||| ||||||
Sbjct: 82572 tacaattgttatattacacat 82592

---

>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22
          Length = 607

 Score =  511 bits (258), Expect = e-142
 Identities = 354/384 (92%), Gaps = 4/384 (1%)
 Strand = Plus / Minus

                                                                       
Query: 263 aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 321
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422

                                                                       
Query: 322 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
           |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362

                                                                       
Query: 382 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
           ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302

                                                                       
Query: 442 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 501
           ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242

                                                                       
Query: 502 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 561
           ||||||||| | || |||||||||||||||||||| |  ||||| |||||||||||||||
Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182

                                                                       
Query: 562 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 621
           ||||||||||| ||||||||||| || |||||    ||||||||||||||||||||| ||
Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125

                                   
Query: 622 tactttactagtttgaaacttgtc 645
           |||||||| | |||||||||||||
Sbjct: 124 tactttaccaatttgaaacttgtc 101



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                       
Query: 173 tcgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattg 232
           |||||||||||||| |||||||||   |||| ||||||||||||||||||||||||||||
Sbjct: 571 tcgaaatcttagattgatctaaagaccattttgatttctttactatatttagtacaattg 512

                        
Query: 233 ttatatgacacat 245
           |||||| ||||||
Sbjct: 511 ttatattacacat 499



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 ttgtcccatatttttctatt 150
           ||||||||||||||||||||
Sbjct: 607 ttgtcccatatttttctatt 588

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  507 bits (256), Expect = e-140
 Identities = 351/382 (91%), Gaps = 3/382 (0%)
 Strand = Plus / Minus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             |||||||||||||||| |||||||||||||| ||||||||||||||   |||||||||||
Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| 
Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             |||||||||| |||||||||||||| |||||||| || |||||||||||| |||||||||
Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965

                                                                         
Query: 503   cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 562
             | |||||  |||| |||||||||||||||||||| |  ||||||||||||||| ||||||
Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905

                                                                         
Query: 563   ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 622
             |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845

                                   
Query: 623   actttactagtttgaaacttgt 644
             ||||||| ||||||||||||||
Sbjct: 74844 actttaccagtttgaaacttgt 74823



 Score =  200 bits (101), Expect = 4e-48
 Identities = 117/121 (96%), Gaps = 1/121 (0%)
 Strand = Plus / Minus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 75426 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 75367

                                                                         
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctattcta 153
             |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 75366 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccatatttttctattcta 75307

              
Query: 154   t 154
             |
Sbjct: 75306 t 75306



 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                         
Query: 176   aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 235
             ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 75289 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 75230

                        
Query: 236   tatgacacatg 246
             |||||||||||
Sbjct: 75229 tatgacacatg 75219

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  424 bits (214), Expect = e-115
 Identities = 380/436 (87%), Gaps = 4/436 (0%)
 Strand = Plus / Minus

                                                                            
Query: 212      ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 271
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467

                                                                            
Query: 272      ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 331
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407

                                                                            
Query: 332      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 391
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347

                                                                            
Query: 392      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 451
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287

                                                                            
Query: 452      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 511
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227

                                                                            
Query: 512      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 569
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169

                                                                            
Query: 570      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 629
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109

                                
Query: 630      tagtttgaaacttgtc 645
                 |||||||||||||||
Sbjct: 18328108 cagtttgaaacttgtc 18328093

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  424 bits (214), Expect = e-115
 Identities = 380/436 (87%), Gaps = 4/436 (0%)
 Strand = Plus / Minus

                                                                            
Query: 212      ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 271
                ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788

                                                                            
Query: 272      ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 331
                |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728

                                                                            
Query: 332      tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 391
                |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668

                                                                            
Query: 392      ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 451
                ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608

                                                                            
Query: 452      cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 511
                | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548

                                                                            
Query: 512      ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 569
                ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490

                                                                            
Query: 570      tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 629
                ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430

                                
Query: 630      tagtttgaaacttgtc 645
                 |||||||||||||||
Sbjct: 18254429 cagtttgaaacttgtc 18254414

---

>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 177034

 Score =  424 bits (214), Expect = e-115
 Identities = 380/436 (87%), Gaps = 4/436 (0%)
 Strand = Plus / Plus

                                                                         
Query: 212   ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 271
             ||||||||||||||| |||||||||||||||||||         || ||  |||||||||
Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527

                                                                         
Query: 272   ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 331
             |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587

                                                                         
Query: 332   tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 391
             |||| ||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647

                                                                         
Query: 392   ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 451
             ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707

                                                                         
Query: 452   cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 511
             | |||||||||| ||| | |||||| || | |||||||||| |||||||||| |||||  
Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767

                                                                         
Query: 512   ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 569
             ||||  ||||| ||||||||||||  | |||| ||||||||||||||||||||||   ||
Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825

                                                                         
Query: 570   tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 629
             ||| |||  ||||||| || ||||||| ||||||||||||||||||||| ||||||||| 
Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885

                             
Query: 630   tagtttgaaacttgtc 645
              |||||||||||||||
Sbjct: 42886 cagtttgaaacttgtc 42901

---

>emb|Y00340.1|CHZMRPS3 Maize chloroplast rps3 gene for ribosomal protein S3
          Length = 731

 Score =  200 bits (101), Expect = 4e-48
 Identities = 114/117 (97%), Gaps = 1/117 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 134 cttcctgtagaccttcagaataattttttggttgtgcgaaccaaaaggaatggtgatttt 75

                                                                    
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatttttctatt 150
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  gggttgtaccaagtctgaaaccgagtggatttattttttgtcccatatttttctatt 18

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  182 bits (92), Expect = 1e-42
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 341    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 400
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590

                                                                          
Query: 401    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 460
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650

                      
Query: 461    aacgccac 468
              || |||||
Sbjct: 212651 aaggccac 212658

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  182 bits (92), Expect = 1e-42
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 341    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 400
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612

                                                                          
Query: 401    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 460
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672

                      
Query: 461    aacgccac 468
              || |||||
Sbjct: 553673 aaggccac 553680

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  182 bits (92), Expect = 1e-42
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 341    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 400
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889

                                                                          
Query: 401    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 460
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949

                      
Query: 461    aacgccac 468
              || |||||
Sbjct: 456950 aaggccac 456957

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  182 bits (92), Expect = 1e-42
 Identities = 119/128 (92%)
 Strand = Plus / Plus

                                                                          
Query: 341    tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 400
              |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124

                                                                          
Query: 401    agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 460
              |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||
Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184

                      
Query: 461    aacgccac 468
              || |||||
Sbjct: 230185 aaggccac 230192

---

>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15,
             complete sequence
          Length = 185021

 Score =  141 bits (71), Expect = 3e-30
 Identities = 86/91 (94%)
 Strand = Plus / Minus

                                                                         
Query: 386   aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 445
             ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213

                                            
Query: 446   cagtttcctcgtagtaacgccaccgaatctc 476
              |||||| |||||||||||||| ||||||||
Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182

---

>gb|DQ069461.1| Typha latifolia ribosomal protein S3 (rps3) gene, partial cds;
           chloroplast
          Length = 654

 Score =  139 bits (70), Expect = 1e-29
 Identities = 98/106 (92%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttcg-aataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           |||||||||||||  || |||||||||||||||||||||||||||||||||| ||  |||
Sbjct: 106 cttcctgtagacccgcggaataattttttggttgtgcgaaccaaaaggaatgatgacttt 47

                                                         
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccat 139
           |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 46  gggttgtaccaagtctgaaaccaagtggatttattttttgtcccat 1

---

>gb|DQ069462.1| Yucca schidigera ribosomal protein S3 (rps3) gene, partial cds;
           chloroplast
          Length = 660

 Score =  137 bits (69), Expect = 5e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                       
Query: 55  aattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtctaaaac 114
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||
Sbjct: 85  aattttttggttgtgcgaaccaaaaggaatgatgattttgggttgtaccaagtctgaaac 26

                                    
Query: 115 cgagtggatttattttttgtcccat 139
           | |||||||||||||||||||||||
Sbjct: 25  caagtggatttattttttgtcccat 1

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  133 bits (67), Expect = 8e-28
 Identities = 169/203 (83%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | | |||| || | ||||||||
Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| |||| |  | || || ||| || | | |||||||| |||
Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 86479 ataagcgtttcctcataggaacg 86501



 Score =  101 bits (51), Expect = 3e-18
 Identities = 94/107 (87%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| |||| |||||| |||||||||||||||||||  ||||||| |||||| ||   ||
Sbjct: 86040 cttcttgtaaaccttcagaataattttttggttgtgaaaaccaaagggaatgatgacctt 86099

                                                            
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 86100 gggttgtacccagtctgaaaccaagtggatttattttttgtcccata 86146

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Plus

                                                                         
Query: 52    aataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtctaa 111
             ||||||||||||||||||| |||||||||||||| ||  |||||||||||||||| ||||
Sbjct: 19394 aataattttttggttgtgcaaaccaaaaggaatgatgactttgggttgtaccaagcctaa 19453

                                          
Query: 112   aaccgagtggatttattttttgtcccata 140
             |||| ||||||||||||||||||||||||
Sbjct: 19454 aaccaagtggatttattttttgtcccata 19482

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  127 bits (64), Expect = 5e-26
 Identities = 98/108 (90%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttcg-aataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             ||||||| ||||||| | |||||||||||||||||||||||||||||||| | ||  |||
Sbjct: 89027 cttcctggagacctttggaataattttttggttgtgcgaaccaaaaggaacgatgacttt 89086

                                                             
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatat 141
             |||||||||||||||| ||||| |||||||||||||| ||||||||||
Sbjct: 89087 gggttgtaccaagtctgaaaccaagtggatttattttctgtcccatat 89134



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 108/132 (81%)
 Strand = Plus / Plus

                                                                         
Query: 314   tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 373
             |||||||||||||| |||| |||||||  ||||  |  ||| ||||||  ||| | ||||
Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369

                                                                         
Query: 374   ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 433
             |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| |
Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429

                         
Query: 434   tcagtatcataa 445
              |||||||||||
Sbjct: 89430 ccagtatcataa 89441

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  125 bits (63), Expect = 2e-25
 Identities = 97/107 (90%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttcg-aataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| |||| ||||||| ||||||||||||||||||| ||||||| |||||| ||   ||
Sbjct: 85233 cttcttgtaaaccttcggaataattttttggttgtgcaaaccaaagggaatgatgacctt 85292

                                                            
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 85293 gggttgtaccaagtctgaaaccgagtggatttattttttgtcccata 85339



 Score =  103 bits (52), Expect = 7e-19
 Identities = 151/184 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | ||||||||||  ||||||| |   |||||||| 
Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||| | |||||| | || || | ||||| |||  | | | |||||||| |||
Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| |||||||||| |||||||| |  ||||||
Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686

                 
Query: 442   ataa 445
             ||||
Sbjct: 85687 ataa 85690

---

>gb|DQ069459.1| Nuphar advena ribosomal protein S3 (rps3) gene, partial cds;
           chloroplast
          Length = 654

 Score =  123 bits (62), Expect = 8e-25
 Identities = 96/106 (90%), Gaps = 1/106 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
           ||||||| |||||||  ||||||||||||||||||||||||||||||||| | ||  |||
Sbjct: 106 cttcctggagacctttagaataattttttggttgtgcgaaccaaaaggaacgatgacttt 47

                                                         
Query: 94  gggttgtaccaagtctaaaaccgagtggatttattttttgtcccat 139
           |||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 46  gggttgtaccaagtctgaaaccaagtggatttattttctgtcccat 1

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             |||||| ||||||||||||||||||||| |||| | ||  ||||||||| ||||||||| 
Sbjct: 83023 gaataactttttggttgtgcgaaccaaagggaaagatgactttgggttgcaccaagtctg 83082

                                                     
Query: 111   aaaccgagtggatttattttttgtcccatatttttctatt 150
             ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 83083 aaaccaagtggatttattttttgtcccatatctttctatt 83122



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 370   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
             |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| 
Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437

                                                           
Query: 430   aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 475
             || |  ||||||||||  |||||||| ||| ||||||  |||||||
Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 86232 ataagcgtttcctcataggaacg 86254



 Score =  101 bits (51), Expect = 3e-18
 Identities = 94/107 (87%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| |||| |||||| |||||||||||||||||||  ||||||| |||||| ||   ||
Sbjct: 85793 cttcttgtaaaccttcagaataattttttggttgtgaaaaccaaagggaatgatgacctt 85852

                                                            
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 85853 gggttgtacccagtctgaaaccaagtggatttattttttgtcccata 85899

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 85357 ataagcgtttcctcataggaacg 85379



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| |||||||  ||||||| |||||| ||   |||||||||||| ||||| 
Sbjct: 84935 gaataatttttgggttgtgaaaaccaaagggaatgatgaccttgggttgtacccagtctg 84994

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 84995 aaaccaagtggatttattttttgtcccata 85024

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||| ||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 86230 ataagcgtttcctcataggaacg 86252



 Score =  101 bits (51), Expect = 3e-18
 Identities = 94/107 (87%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| |||| |||||| |||||||||||||||||||  ||||||| |||||| ||   ||
Sbjct: 85791 cttcttgtaaaccttcagaataattttttggttgtgaaaaccaaagggaatgatgacctt 85850

                                                            
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 85851 gggttgtacccagtctgaaaccaagtggatttattttttgtcccata 85897

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||  | | ||||||||
Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| |||| |  | || || |||  | | | |||||||| |||
Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| |||| |||||||||||||| |  ||||||
Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 86001 ataagcgtttcctcataggaacg 86023



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 50    cgaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtct 109
             ||||||||||||||||||||  ||||||| |||||| ||   ||| |||||||| |||||
Sbjct: 85578 cgaataattttttggttgtgaaaaccaaagggaatgatgaccttgagttgtacccagtct 85637

                                            
Query: 110   aaaaccgagtggatttattttttgtcccata 140
              ||||| ||||||||||||||||||||||||
Sbjct: 85638 gaaaccaagtggatttattttttgtcccata 85668

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  117 bits (59), Expect = 5e-23
 Identities = 167/203 (82%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| | || || | || || |||  | | | |||||||| |||
Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 85369 ataagcgtttcctcataggaacg 85391



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| |||||||  ||||||| |||||| ||   |||||||||||| ||||| 
Sbjct: 84947 gaataatttttgggttgtgaaaaccaaagggaatgatgaccttgggttgtacccagtctg 85006

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 85007 aaaccaagtggatttattttttgtcccata 85036

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             |||||||||||||||||||||||||||| |||||| ||   |||||||||||||||||| 
Sbjct: 83274 gaataattttttggttgtgcgaaccaaagggaatgatgaccttgggttgtaccaagtctg 83333

                                          
Query: 111   aaaccgagtggatttattttttgtcccat 139
             ||||| | |||||||||||||||||||||
Sbjct: 83334 aaaccaattggatttattttttgtcccat 83362

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             |||||||||||||||||||||||||||| |||||| ||   |||||||||||||||||| 
Sbjct: 82743 gaataattttttggttgtgcgaaccaaagggaatgatgaccttgggttgtaccaagtctg 82802

                                          
Query: 111   aaaccgagtggatttattttttgtcccat 139
             ||||| | |||||||||||||||||||||
Sbjct: 82803 aaaccaattggatttattttttgtcccat 82831



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||| ||||||||||||||| | ||| ||||||| |||||||   || | ||||||
Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041

                                      
Query: 322   gctttagtaatgaataaattcgctt 346
             |||||| |||| | |||||| ||||
Sbjct: 83042 gctttactaatcactaaatttgctt 83066

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  113 bits (57), Expect = 7e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             |||||||||||||||||||||||||||| |||||| ||   |||||||||||||||||| 
Sbjct: 83272 gaataattttttggttgtgcgaaccaaagggaatgatgaccttgggttgtaccaagtctg 83331

                                          
Query: 111   aaaccgagtggatttattttttgtcccat 139
             ||||| | |||||||||||||||||||||
Sbjct: 83332 aaaccaattggatttattttttgtcccat 83360

---

>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial
           sequence; chloroplast
          Length = 1015

 Score =  111 bits (56), Expect = 3e-21
 Identities = 200/248 (80%)
 Strand = Plus / Plus

                                                                       
Query: 263 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261

                                                                       
Query: 323 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
           ||||| |||| ||||||||| |||  |  ||  ||   | |||||| |||||||  ||||
Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321

                                                                       
Query: 383 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381

                                                                       
Query: 443 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441

                   
Query: 503 cagacata 510
           ||||||||
Sbjct: 442 cagacata 449

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  109 bits (55), Expect = 1e-20
 Identities = 85/95 (89%)
 Strand = Plus / Plus

                                                                         
Query: 46    ccttcgaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaa 105
             |||| |||||||||||||||||||| |||||||  ||||| ||   ||||||||||||||
Sbjct: 88243 ccttggaataattttttggttgtgcaaaccaaagcgaatgatgaccttgggttgtaccaa 88302

                                                
Query: 106   gtctaaaaccgagtggatttattttttgtcccata 140
             |||| ||||| ||||||||||||||||||||||||
Sbjct: 88303 gtctgaaacccagtggatttattttttgtcccata 88337



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttca 298
             ||||||||||||||||||||||| | ||||| ||||
Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 85521 ataagcgtttcctcataggaacg 85543



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| |||||||  ||||||| |||||| ||  ||||||||||||| ||||| 
Sbjct: 85099 gaataatttttgggttgtgaaaaccaaagggaatgatgactttgggttgtacccagtctg 85158

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 85159 aaaccaagtggatttattttttgtcccata 85188

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 85518 ataagcgtttcctcataggaacg 85540



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| |||||||  ||||||| |||||| ||  ||||||||||||| ||||| 
Sbjct: 85096 gaataatttttgggttgtgaaaaccaaagggaatgatgactttgggttgtacccagtctg 85155

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 85156 aaaccaagtggatttattttttgtcccata 85185

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  109 bits (55), Expect = 1e-20
 Identities = 166/203 (81%)
 Strand = Plus / Plus

                                                                         
Query: 262   aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 321
             |||||||||||||||||||||||| | |||||||||| | ||||||    | ||||||||
Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283

                                                                         
Query: 322   gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 381
             |||||| |||||| |||||| | || |  | || || |||  | | | |||||||| |||
Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343

                                                                         
Query: 382   gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 441
             || ||||||||||| || || ||||||||| ||||||||||||||||||| |  ||||||
Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403

                                    
Query: 442   ataacagtttcctcgtagtaacg 464
             ||||  |||||||| ||| ||||
Sbjct: 85404 ataagcgtttcctcataggaacg 85426



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| |||||||  ||||||| |||||| ||   |||||||||||| ||||| 
Sbjct: 84982 gaataatttttgggttgtgaaaaccaaagggaatgatgaccttgggttgtacccagtctg 85041

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 85042 aaaccaagtggatttattttttgtcccata 85071

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score =  107 bits (54), Expect = 5e-20
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||| |||||||||||||| |||||||  ||||| ||  ||||||||||||||||||| 
Sbjct: 83394 gaatacttttttggttgtgcaaaccaaagagaatgatgactttgggttgtaccaagtctg 83453

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 83454 aaaccaagtggatttattttttgtcccata 83483



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 385   gaataaaccaactttaagatgggataagatgctcgatagggcat 428
             ||||||||||| || || ||||||||| || ||||||| |||||
Sbjct: 83762 gaataaaccaatttaaaaatgggataacatcctcgataaggcat 83805

---

>gb|DQ069457.1| Acorus americanus ribosomal protein S3 (rps3) gene, partial cds;
           chloroplast
          Length = 654

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                       
Query: 51  gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
           |||||| ||||||||||||||||||||| |||| | ||  ||||||||| ||||||||| 
Sbjct: 89  gaataactttttggttgtgcgaaccaaagggaaagatgactttgggttgcaccaagtctg 30

                                        
Query: 111 aaaccgagtggatttattttttgtcccat 139
           ||||| |||||||||||||||||||||||
Sbjct: 29  aaaccaagtggatttattttttgtcccat 1

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||| |||||||||||||| |||||||  ||||| ||  ||||||||||||||||||| 
Sbjct: 82497 gaatacttttttggttgtgcaaaccaaatagaatgatgactttgggttgtaccaagtctg 82556

                                          
Query: 111   aaaccgagtggatttattttttgtcccat 139
             ||||| |||||||||||||||||||||||
Sbjct: 82557 aaaccaagtggatttattttttgtcccat 82585

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  105 bits (53), Expect = 2e-19
 Identities = 96/109 (88%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagacct-tcgaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| ||||||||| | ||| |||||||||||| |||||||||||| ||||| ||  |||
Sbjct: 85470 cttcttgtagacctatggaaaaattttttggttttgcgaaccaaaaagaatgatgacttt 85529

                                                              
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatt 142
             | ||||| |||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 85530 gagttgttccaagtctgaaaccaagtggatttattttttgtcccatatt 85578



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 195/248 (78%)
 Strand = Plus / Plus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             |||||||||||||||| || ||| | || || ||||||||||| |  ||| ||||||| |
Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||| |||| ||||| |   |||  |  ||| || ||| |||| | |||||||| ||||
Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             | |||||||| || |||||||| ||||||||||| | ||| ||||| || |  |||||||
Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             | |  | |||||| ||  |||| |  |||||||  ||||  |||||| ||||||||||||
Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930

                     
Query: 503   cagacata 510
             ||||||||
Sbjct: 85931 cagacata 85938

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  101 bits (51), Expect = 3e-18
 Identities = 94/107 (87%), Gaps = 1/107 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttcg-aataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| |||||||| ||| |||| ||||| |||||||| |||||||  ||||| ||  |||
Sbjct: 87846 cttcttgtagaccctcggaatactttttcggttgtgcaaaccaaagagaatgatgacttt 87905

                                                            
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 87906 gggttgtaccaagtctgaaaccaagtggatttattttttgtcccata 87952



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                         
Query: 370   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
             |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| ||||||
Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296

                                                
Query: 430   aggttcagtatcataacagtttcctcgtagtaacg 464
             || |  ||||||||||  ||||| |||||| ||||
Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331

---

>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic
           spacer and tRNA-His (trnH) gene, partial sequence;
           chloroplast
          Length = 770

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 370 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
           |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| 
Sbjct: 57  gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116

                                                                       
Query: 430 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 489
           || | |||||||||||  |||||||| ||  |||| |  ||||| |  ||||  ||||||
Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176

                                
Query: 490 tgtgctttgaaaacagacata 510
           |||||||||||||||||||||
Sbjct: 177 tgtgctttgaaaacagacata 197

---

>gb|DQ069460.1| Ranunculus macranthus ribosomal protein S3 (rps3) gene, partial
           cds; chloroplast
          Length = 651

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                       
Query: 51  gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
           |||||||||||||||||||| |||||||  ||||| ||  |||||||||||||||| |  
Sbjct: 89  gaataattttttggttgtgcaaaccaaacagaatgatggctttgggttgtaccaagccgg 30

                                        
Query: 111 aaaccgagtggatttattttttgtcccat 139
           || ||||||||||||||||||||||||||
Sbjct: 29  aacccgagtggatttattttttgtcccat 1

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                         
Query: 49    tcgaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtc 108
             |||||||||  ||||||||||||||||||| |||| | ||  |||||||||| |||||||
Sbjct: 90019 tcgaataatcctttggttgtgcgaaccaaagggaacgatgactttgggttgtgccaagtc 90078

                                              
Query: 109   taaaaccgagtggatttattttttgtcccatat 141
             | ||||| |||||||||||||| ||||||||||
Sbjct: 90079 tgaaaccaagtggatttattttctgtcccatat 90111

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 94/108 (87%), Gaps = 1/108 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttcg-aataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             ||||||||||||||  | ||||| ||||||||||||||||||||| |||||| ||  |||
Sbjct: 84482 cttcctgtagacctctgcaataactttttggttgtgcgaaccaaagggaatgatgacttt 84541

                                                             
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatat 141
             || ||  ||||||||  ||||||||||||||||||||||| |||||||
Sbjct: 84542 ggttttcaccaagtcggaaaccgagtggatttattttttgccccatat 84589



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 197/249 (79%)
 Strand = Plus / Plus

                                                                         
Query: 263   aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
             |||||||||||  ||| |||||| | || || ||||  ||||||| || | |||||||||
Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803

                                                                         
Query: 323   ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
             ||||| |||||||| |||  |||| ||  |||  | |||  ||| | |||||||| ||||
Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863

                                                                         
Query: 383   ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
             | ||||||||||  || || |||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923

                                                                         
Query: 443   taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
             |||  |||||| | ||| |||| |  |||||||  ||||  |||||| ||||||||  | 
Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983

                      
Query: 503   cagacatag 511
             |||||||||
Sbjct: 84984 cagacatag 84992

---

>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1029

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 198/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 263 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278

                                                                       
Query: 323 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338

                                                                       
Query: 383 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
           | ||||||||||| || || |||||||||||||| ||||| |||||||| | ||||||||
Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398

                                                                       
Query: 443 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458

                   
Query: 503 cagacata 510
           ||||||||
Sbjct: 459 cagacata 466

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 483     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 542
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351

                                                                  
Query: 543     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 593
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300

---

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Plus

                                                                         
Query: 483   aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 542
             |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146

                                                                
Query: 543   gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 593
             |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                           
Query: 483     aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 542
               |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466

                                                                  
Query: 543     gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 593
               |||||||| |||| |||||||||| ||| | ||||| ||||||||||||||
Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415

---

>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0032G22
          Length = 127365

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 331   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 390
             ||||||||||| |||||||||||||||||||||||||| | |||||| | ||||||||||
Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562

                    
Query: 391   accaact 397
             |||||||
Sbjct: 18561 accaact 18555



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/114 (84%), Gaps = 9/114 (7%)
 Strand = Plus / Minus

                                                                         
Query: 424   ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 483
             ||||||||||||||||||||||  ||||| ||||||||||||      ||||| | ||||
Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487

                                                                   
Query: 484   actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 536
             |||| ||||| |||||||||| |||||  ||||  |||||||||||||||||||
Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 157/194 (80%)
 Strand = Plus / Plus

                                                                         
Query: 271   cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 330
             ||||||||||||||| | ||||| |||||| |||||| |    ||||||| |||||| ||
Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423

                                                                         
Query: 331   atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 390
             || | |||| | ||||  | |||| || ||| |||| | |||||||| ||||| ||||||
Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483

                                                                         
Query: 391   accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 450
             |||||||| || ||||||||| | |||||||| ||||| || |  ||||||||||  |||
Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543

                           
Query: 451   tcctcgtagtaacg 464
             ||||||||| ||||
Sbjct: 88544 tcctcgtaggaacg 88557



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||| | |||||| |||||||  ||||| ||   |||||||||||||||||| 
Sbjct: 88110 gaataatttttggcttgtgcaaaccaaatagaatgatgaccttgggttgtaccaagtctg 88169

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| ||||||||||||||||||||||||
Sbjct: 88170 aaaccaagtggatttattttttgtcccata 88199

---

>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22
            for ribosomal proteins S3, S19, L14, L16 and L22
          Length = 4102

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 94/109 (86%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                        
Query: 35   cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
            |||| ||||||||||| | ||| |||||||||||||  ||||||| |||||  ||  |||
Sbjct: 1137 cttcttgtagaccttctgcatagttttttggttgtgaaaaccaaagggaataatgacttt 1078

                                                             
Query: 94   gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatt 142
            | |||||||||||||  ||||| ||||||||||||||||||||||||||
Sbjct: 1077 gtgttgtaccaagtcggaaaccaagtggatttattttttgtcccatatt 1029



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 370 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
           |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631

             
Query: 430 ag 431
           ||
Sbjct: 630 ag 629

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 94/109 (86%), Gaps = 1/109 (0%)
 Strand = Plus / Plus

                                                                         
Query: 35    cttcctgtagaccttc-gaataattttttggttgtgcgaaccaaaaggaatggtgttttt 93
             |||| ||||||||||| | ||| |||||||||||||  ||||||| |||||  ||  |||
Sbjct: 81805 cttcttgtagaccttctgcatagttttttggttgtgaaaaccaaagggaataatgacttt 81864

                                                              
Query: 94    gggttgtaccaagtctaaaaccgagtggatttattttttgtcccatatt 142
             | |||||||||||||  ||||| ||||||||||||||||||||||||||
Sbjct: 81865 gtgttgtaccaagtcggaaaccaagtggatttattttttgtcccatatt 81913



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 370   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
             |||||||| ||||| ||||||| ||| || || ||||||||| |||||||||||||||||
Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311

               
Query: 430   ag 431
             ||
Sbjct: 82312 ag 82313

---

>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence;
           chloroplast
          Length = 1060

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 263 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287

                                                                       
Query: 323 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
           ||| | |||| ||||||||| |||  |  ||  ||   | |||||| || ||||  ||||
Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347

                                                                       
Query: 383 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
           | ||||||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407

                                                                       
Query: 443 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467

                   
Query: 503 cagacata 510
           ||||||||
Sbjct: 468 cagacata 475

---

>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial
           cds; psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
          Length = 1172

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 197/248 (79%)
 Strand = Plus / Plus

                                                                       
Query: 263 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 322
           |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| |
Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342

                                                                       
Query: 323 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 382
           ||| | |||| ||||||||| |||| |  ||  ||   | |||||| || ||||  ||||
Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402

                                                                       
Query: 383 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 442
           | ||| ||||||| || || |||||||||||||| ||||| ||||||||   ||||||||
Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462

                                                                       
Query: 443 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 502
           |||  || ||| | ||| ||||||  |||||||  ||||  |||||| ||||||||||||
Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522

                   
Query: 503 cagacata 510
           ||||||||
Sbjct: 523 cagacata 530

---

>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein
          Length = 5896

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 94/111 (84%)
 Strand = Plus / Plus

                                                                        
Query: 483  aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 542
            |||||||||| ||||||||||||||||| ||||  |||||||||| ||||||||    | 
Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469

                                                               
Query: 543  gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 593
            |||||||| |||| |||||| ||| ||| | ||||| ||||||||||||||
Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520

---

>emb|AJ560717.1|OMI560717 Orobanche minor chloroplast rps19 gene (partial), rpl22 gene and
           rps3 gene (partial)
          Length = 1121

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                       
Query: 51  gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
           ||||| ||||||| |||| | |||||||  ||||| || |||||||||||||||||||| 
Sbjct: 713 gaatatttttttgcttgtacaaaccaaagagaatgatgattttgggttgtaccaagtctg 654

                                         
Query: 111 aaaccgagtggatttattttttgtcccata 140
           ||| | |||||||||||||||||| |||||
Sbjct: 653 aaaacaagtggatttattttttgtgccata 624

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Minus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||| |||||||||| |||||||  ||||  || ||||| |||||||||||||| 
Sbjct: 42386 gaataatttcttggttgtgcaaaccaaatagaatcatgattttgagttgtaccaagtctg 42327

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| || |||| ||||||||||||||||
Sbjct: 42326 aaaccaagcggatgtattttttgtcccata 42297

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 78/90 (86%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||| |||||||||| |||||||  ||||  ||  |||| |||||||||||||| 
Sbjct: 81254 gaataatttgttggttgtgcaaaccaaatagaatcatgactttgagttgtaccaagtctg 81313

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| || |||||||||||||||||||||
Sbjct: 81314 aaaccaagcggatttattttttgtcccata 81343

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 92    ttgggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 85759 ttgggttgcaccaagtcgaaaaccgagtggatttattttttgtcccata 85807



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 370   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142

                                                
Query: 430   aggttcagtatcataacagtttcctcgtagtaacg 464
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                              
Query: 92    ttgggttgtaccaagtctaaaaccgagtggatttattttttgtcccata 140
             |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 85988 ttgggttgcaccaagtcgaaaaccgagtggatttattttttgtcccata 86036



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                         
Query: 370   gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 429
             |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| ||||||
Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371

                                                
Query: 430   aggttcagtatcataacagtttcctcgtagtaacg 464
             || |  |||||||| |  ||||| |||||| ||||
Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406

---

>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence
          Length = 128458

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             |||||||||||||||||||| |||||||  ||||  || ||| | |||||||||||||| 
Sbjct: 26579 gaataattttttggttgtgcaaaccaaatagaatcatgatttggagttgtaccaagtctg 26638

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| |  |||| ||||||||||||||||
Sbjct: 26639 aaaccaaacggatgtattttttgtcccata 26668

---

>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence
          Length = 6550

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                        
Query: 51   gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
            ||||| ||| |||||||||| |||||||  ||||  ||  |||| |||||||||||||| 
Sbjct: 3268 gaatattttgttggttgtgcaaaccaaatagaatcatgactttgagttgtaccaagtctg 3209

                                          
Query: 111  aaaccgagtggatttattttttgtcccata 140
            ||||| || |||||||||||||||||||||
Sbjct: 3208 aaaccaagcggatttattttttgtcccata 3179

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 77/90 (85%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||| ||||||| || |||||||  ||||  ||  |||| |||||||||||||| 
Sbjct: 82516 gaataatttgttggttgagcaaaccaaatagaatcatgactttgagttgtaccaagtctg 82575

                                           
Query: 111   aaaccgagtggatttattttttgtcccata 140
             ||||| || |||||||||||||||||||||
Sbjct: 82576 aaaccaagcggatttattttttgtcccata 82605

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Plus

                                                                      
Query: 85    ggtgtttttgggttgtaccaagtctaaaaccgagtggatttattttttgtcccatat 141
             |||| ||||| ||| |||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 78342 ggtgattttgtgttataccaagtctaaaaccaagtgggtttattttttgtcccatat 78398

---

>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence
          Length = 813

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                       
Query: 314 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 373
           |||||||||||||| |||||| ||||||  ||| || |||| || |||  ||| | ||||
Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65

                                                                     
Query: 374 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 431
           |||| ||||| ||||||| ||| || || | ||||||| |||||||||| ||||||||
Sbjct: 64  ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||  || ||||||||||||||  |||| | |  |||||||||  ||||||||||
Sbjct: 61049 gaataattcctttgttgtgcgaaccaatgggaacgatcattttgggttacaccaagtcta 61108

                                 
Query: 111   aaaccgagtggatttatttt 130
             ||||| ||||||||||||||
Sbjct: 61109 aaaccaagtggatttatttt 61128

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 96    gttgtaccaagtctaaaaccgagtggatttattttttg 133
             |||||||||||||| |||||||| ||||||||||||||
Sbjct: 88602 gttgtaccaagtctgaaaccgaggggatttattttttg 88639

---

>gb|DQ069458.1| Ginkgo biloba ribosomal protein S3 (rps3) gene, partial cds;
           chloroplast
          Length = 654

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 51  gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
           ||||||| ||||  |||||| ||||||  |||| | || |||||||||  ||||||||||
Sbjct: 89  gaataatattttttttgtgcaaaccaatgggaacgatgattttgggttacaccaagtcta 30

                                        
Query: 111 aaaccgagtggatttattttttgtcccat 139
           ||||| |||||||| ||| | ||||||||
Sbjct: 29  aaaccaagtggattaattctctgtcccat 1

---

>gb|U92462.1|PAU92462 Picea abies ribosomal protein L16 (rpl16) partial cds, ribosomal
           proteins S3 (rps3), L22 (rpl22), S19 (rps19), L2 (rpl2),
           and L23 (rpl23) genes, complete cds, tRNA-Ile (trnI)
           gene, complete sequence and psbA, ndhC and ndhK
           pseudogenes, chloroplast genes encoding chloroplast
           products
          Length = 4723

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 90  ttttgggttgtaccaagtctaaaaccgagtggatttatttt 130
           |||||||||  ||||||||||||||| ||||||||||||||
Sbjct: 764 ttttgggttacaccaagtctaaaaccaagtggatttatttt 804

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||||||||||| || |||||| | ||||| || || || ||   |||||||| |
Sbjct: 82267 gaataattttttggttgcgcaaaccaataagaatgatgattctgagtgacaccaagtcga 82326

                                          
Query: 111   aaaccgagtggatttattttttgtcccat 139
             ||||| ||||| || ||||||||||||||
Sbjct: 82327 aaaccaagtgggttaattttttgtcccat 82355

---

>dbj|AB087471.1| Anthoceros formosae chloroplast rps3, rpl22 mRNA for ribosomal
           protein S3, ribosomal protein L22, complete and partial
           cds
          Length = 735

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 102 ccaagtctaaaaccgagtggatttattttttgtcccatat 141
           ||||||| |||||| |||||||| ||||||||||||||||
Sbjct: 638 ccaagtcgaaaaccaagtggattaattttttgtcccatat 677

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 102    ccaagtctaaaaccgagtggatttattttttgtcccatat 141
              ||||||| |||||| |||||||| ||||||||||||||||
Sbjct: 102506 ccaagtcgaaaaccaagtggattaattttttgtcccatat 102545

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 65    ttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtctaaaaccgagtggatt 124
             ||||||||||||| | |||   || ||||| ||||||||||||| ||| || ||||||| 
Sbjct: 81742 ttgtgcgaaccaataagaacaatgattttgagttgtaccaagtcgaaatccaagtggatg 81801

                             
Query: 125   tattttttgtcccata 140
              |||||||||||||||
Sbjct: 81802 gattttttgtcccata 81817

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                         
Query: 51    gaataattttttggttgtgcgaaccaaaaggaatggtgtttttgggttgtaccaagtcta 110
             ||||||||  || ||||||||||||||  |||| | |  ||||| |||  ||||||||||
Sbjct: 62940 gaataattcctttgttgtgcgaaccaatgggaacgctcattttgagttacaccaagtcta 62999

                                 
Query: 111   aaaccgagtggatttatttt 130
             ||||| ||||||||||||||
Sbjct: 63000 aaaccaagtggatttatttt 63019

---

>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
             complete sequence
          Length = 155106

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 344   ctttgtcgaaatccctataatgagttgcatttg 376
             |||||| |||||||||||||||||| |||||||
Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 344     ctttgtcgaaatccctataatgagttgcatttg 376
               |||||| |||||||||||||||||| |||||||
Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 104    aagtctaaaaccgagtggatttattttttgtccca 138
              |||||||||||| | |||||||| |||||||||||
Sbjct: 102131 aagtctaaaacctaatggatttactttttgtccca 102097

---

>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 tacgtcctcgagctcgaggtct 287
           ||||||||||||||||||||||
Sbjct: 192 tacgtcctcgagctcgaggtct 171

---

>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene,
           partial cds
          Length = 221

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 tacgtcctcgagctcgaggtct 287
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene,
           partial cds
          Length = 231

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 tacgtcctcgagctcgaggtct 287
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene,
           partial cds
          Length = 216

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 tacgtcctcgagctcgaggtct 287
           ||||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtct 73

---

>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03,
             complete sequence
          Length = 130910

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 347   tgtcgaaatccctataatgagttgcatttg 376
             ||||||||||| |||||||||| |||||||
Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433

---

>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190)
            genes, complete cds, ribosomal protein L22 (rpL22) gene,
            5' end, transfer RNA-Ile and -His genes
          Length = 2789

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 612  cctagggatatactttactagtttgaaacttgtc 645
            ||||||| |||||||||| | |||||||||||||
Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtc 2756

---

>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein
           (nifH) gene, partial cds
          Length = 356

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 198 tacgtcctcgagctcgaggtc 178

---

>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the
            complete plasmid sequence
          Length = 10370

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 267  acgtcctcgagctcgaggtct 287
            |||||||||||||||||||||
Sbjct: 8029 acgtcctcgagctcgaggtct 8009

---

>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtct 171

---

>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene,
           partial cds
          Length = 234

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 93  acgtcctcgagctcgaggtct 73

---

>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene,
           partial cds
          Length = 249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 94  tacgtcctcgagctcgaggtc 74

---

>gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogenase reductase
           (nifH) mRNA, partial cds
          Length = 324

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtct 75

---

>gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (nifH) gene,
           partial cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (nifH) gene, partial
           cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, partial cds
          Length = 317

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 90  acgtcctcgagctcgaggtct 70

---

>gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW13 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtct 96

---

>gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, complete sequence
          Length = 205915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 510    agggatacgtttttgtgctttgaaa 534
              |||||||||||||||||| ||||||
Sbjct: 176607 agggatacgtttttgtgccttgaaa 176583

---

>emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERF-54B
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERF-44A
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERF-41B
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone SERE-22A
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone GYMC-29B
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 114 tacgtcctcgagctcgaggtc 94

---

>emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase,
           clone GYMC-22B
          Length = 357

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 114 tacgtcctcgagctcgaggtc 94

---

>emb|BX927234.8| Zebrafish DNA sequence from clone CH211-196N4 in linkage group 19,
             complete sequence
          Length = 187155

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   tattttttgtcccatattttt 145
             |||||||||||||||||||||
Sbjct: 96103 tattttttgtcccatattttt 96123

---

>gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein-like protein
           (nifH) gene, partial sequence
          Length = 447

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 85  acgtcctcgagctcgaggtct 65

---

>gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-like protein (nifH)
           gene, partial sequence
          Length = 447

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (nifH) gene,
           partial cds
          Length = 446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (nifH) gene,
           partial cds
          Length = 446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-like protien (nifH)
           gene, partial sequence
          Length = 450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein (nifH) gene,
           partial cds
          Length = 445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein (nifH) gene,
           partial cds
          Length = 445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein (nifH) gene,
           partial cds
          Length = 446

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 266 tacgtcctcgagctcgaggtc 286
           |||||||||||||||||||||
Sbjct: 85  tacgtcctcgagctcgaggtc 65

---

>emb|BX323543.11| Zebrafish DNA sequence from clone DKEYP-67E1 in linkage group 25,
              complete sequence
          Length = 181520

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 125    tattttttgtcccatattttt 145
              |||||||||||||||||||||
Sbjct: 138118 tattttttgtcccatattttt 138098

---

>dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitrogenase reductase
           subunit, partial cds
          Length = 726

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 192 acgtcctcgagctcgaggtct 172

---

>dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein of
           nitrogenase-nifH, partial cds, strain:F-4
          Length = 418

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 203 acgtcctcgagctcgaggtct 183

---

>gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) gene, partial cds
          Length = 715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 165 acgtcctcgagctcgaggtct 145

---

>gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH) gene, partial
           sequence
          Length = 331

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtct 93

---

>gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) gene, partial
           sequence
          Length = 239

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 98  acgtcctcgagctcgaggtct 78

---

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 267     acgtcctcgagctcgaggtct 287
               |||||||||||||||||||||
Sbjct: 1704617 acgtcctcgagctcgaggtct 1704637

---

>dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase
           reductase, partial cds, clone: NE5L-ROR32
          Length = 390

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 203 acgtcctcgagctcgaggtct 183

---

>gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 403

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 177 acgtcctcgagctcgaggtct 157

---

>gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 403

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 177 acgtcctcgagctcgaggtct 157

---

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 111    aaaccgagtggatttattttttgtcccat 139
              ||||||| |||||||| ||||||||||||
Sbjct: 765377 aaaccgattggatttactttttgtcccat 765349

---

>gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 355

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone rp23-199g2, complete
             sequence
          Length = 214798

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 510   agggatacgtttttgtgctttgaaa 534
             |||||||||||||||||| ||||||
Sbjct: 27852 agggatacgtttttgtgccttgaaa 27828

---

>gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#032) dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reductase (nifH) gene,
           partial cds
          Length = 755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 174 acgtcctcgagctcgaggtct 154

---

>gb|AF115283.1|AF115283 Leptospira interrogans S10-spc-alpha locus, complete sequence
          Length = 20709

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 111  aaaccgagtggatttattttttgtcccat 139
            ||||||| |||||||| ||||||||||||
Sbjct: 8933 aaaccgattggatttactttttgtcccat 8905

---

>gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 353

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 172 acgtcctcgagctcgaggtct 152

---

>gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 352

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 acgtcctcgagctcgaggtct 287
           |||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtct 151

---

>emb|CR792419.10| Zebrafish DNA sequence from clone DKEY-11A2 in linkage group 3,
            complete sequence
          Length = 61995

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  tattttttgtcccatattttt 145
            |||||||||||||||||||||
Sbjct: 5909 tattttttgtcccatattttt 5929

---

>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 111     aaaccgagtggatttattttttgtcccat 139
               ||||||| |||||||| ||||||||||||
Sbjct: 3466038 aaaccgattggatttactttttgtcccat 3466066

---

>gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase iron protein (nifH)
           gene, partial cds
          Length = 329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrogen reductase
           (nifH) gene, partial cds
          Length = 327

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase iron protein (nifH)
           gene, partial cds
          Length = 359

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtc 94

---

>gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 383

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 209 acgtcctcgagctcgaggtc 190

---

>gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, complete sequence
          Length = 210235

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   agcccacttttcttcttctt 608
             ||||||||||||||||||||
Sbjct: 12813 agcccacttttcttcttctt 12794

---

>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence
          Length = 175313

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 589    agcccacttttcttcttctt 608
              ||||||||||||||||||||
Sbjct: 158360 agcccacttttcttcttctt 158341

---

>gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete sequence
          Length = 111889

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   tattttttgtcccatatttttcta 148
             ||||||||||||||||| ||||||
Sbjct: 80643 tattttttgtcccatatgtttcta 80666

---

>gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 96  acgtcctcgagctcgaggtc 77

---

>gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 96  acgtcctcgagctcgaggtc 77

---

>gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 96  acgtcctcgagctcgaggtc 77

---

>gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 325

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 96  acgtcctcgagctcgaggtc 77

---

>gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   attttttgtcccatattttt 145
             ||||||||||||||||||||
Sbjct: 26139 attttttgtcccatattttt 26158

---

>gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase reductase (nifH)
           gene, partial cds
          Length = 414

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtc 172

---

>gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 397

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 171 acgtcctcgagctcgaggtc 152

---

>gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reductase (nifH) gene,
           partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reductase (nifH) gene,
           partial cds
          Length = 327

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|AY581120.1| Sitobion avenae cell division cycle protein 42 (cdc42) mRNA,
           complete cds
          Length = 661

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 66  tgtgcgaaccaaaaggaatggtgttttt 93
           ||||| |||||| |||||||||||||||
Sbjct: 395 tgtgccaaccaacaggaatggtgttttt 368

---

>gb|AY574638.1| Rhopalosiphum padi Rho family small GTP binding protein cdc42 mRNA,
           complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 66  tgtgcgaaccaaaaggaatggtgttttt 93
           ||||| |||||| |||||||||||||||
Sbjct: 541 tgtgccaaccaacaggaatggtgttttt 514

---

>gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogenase reductase
           (nifH) gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 268 cgtcctcgagctcgaggtct 287
           ||||||||||||||||||||
Sbjct: 94  cgtcctcgagctcgaggtct 75

---

>gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW10 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1 nitrogenase iron
           protein (nifH) gene, partial cds
          Length = 368

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence
          Length = 162162

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 591    cccacttttcttcttctttatcct 614
              ||||||||||||||||||| ||||
Sbjct: 128312 cccacttttcttcttctttttcct 128335

---

>gb|AY458644.1| Uncultured bacterium 562 clone EBAC000-45B06 genomic sequence
          Length = 61185

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 100   taccaagtctaaaaccgagtggatttattttttgtcccat 139
             |||| |||||||||||   |||||||| ||||||||||||
Sbjct: 40344 tacctagtctaaaacctgttggatttactttttgtcccat 40305

---

>emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in linkage group 6,
             complete sequence
          Length = 101572

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   ttgtcccatatttttctattctat 154
             |||||||||||||| |||||||||
Sbjct: 63262 ttgtcccatattttactattctat 63285

---

>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence
          Length = 212579

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 583    ttccttagcccacttttctt 602
              ||||||||||||||||||||
Sbjct: 143246 ttccttagcccacttttctt 143227

---

>emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 in linkage group 8,
              complete sequence
          Length = 192705

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    tttagatttctttactatat 220
              ||||||||||||||||||||
Sbjct: 139207 tttagatttctttactatat 139226

---

>gb|AY372454.1| Uncultured marine gamma proteobacterium EB000-45B06 fosmid clone
          Length = 61173

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 100   taccaagtctaaaaccgagtggatttattttttgtcccat 139
             |||| |||||||||||   |||||||| ||||||||||||
Sbjct: 40343 tacctagtctaaaacctgttggatttactttttgtcccat 40304

---

>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a
              ring finger protein 12 (RNF12) pseudogene, the 5' end of
              the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma),
              the 3' end of the MRPS31 gene for mitochondrial ribosomal
              protein S31 and a CpG island, complete sequence
          Length = 151261

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    ccacttttcttcttctttat 611
              ||||||||||||||||||||
Sbjct: 101412 ccacttttcttcttctttat 101431

---

>emb|AL356374.13| Human DNA sequence from clone RP11-454P17 on chromosome 6, complete
             sequence
          Length = 21183

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gatttattttttgtcccatatttt 144
             ||||||||||||| ||||||||||
Sbjct: 10235 gatttattttttgacccatatttt 10212

---

>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   aactctttgtgctttgaaaa 502
             ||||||||||||||||||||
Sbjct: 86786 aactctttgtgctttgaaaa 86767

---

>emb|Z47547.1|MTCCGNME Chondrus crispus complete mitochondrial genome
          Length = 25836

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 96   gttgtaccaagtctaaaaccgagtggatttattttttgtcccat 139
            ||||| |||||||||||||  | |||||| ||||||||| ||||
Sbjct: 6346 gttgttccaagtctaaaacttattggattaattttttgtgccat 6303

---

>gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete sequence
          Length = 99046

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  tttctttactatatttagtacaat 230
            ||||||||||||||| ||||||||
Sbjct: 9200 tttctttactatattgagtacaat 9223

---

>dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protein of nitrogenase,
           partial cds, strain:IAM 14808
          Length = 416

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 182 acgtcctcgagctcgaggtc 163

---

>gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 dinitrogen reductase
           (nifH) gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 dinitrogen reductase
           (nifH) gene, partial cds
          Length = 327

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|DQ413230.1| Acyrthosiphon pisum isolate WHAP0364 putative Rho family small GTP
           binding protein cdc42 mRNA, complete cds
          Length = 576

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 66  tgtgcgaaccaaaaggaatggtgttttt 93
           ||||| |||||| |||||||||||||||
Sbjct: 345 tgtgccaaccaacaggaatggtgttttt 318

---

>gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH) gene, partial
           sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 116 acgtcctcgagctcgaggtc 97

---

>gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH) gene, partial
           sequence
          Length = 336

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 113 acgtcctcgagctcgaggtc 94

---

>gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH) gene, partial
           sequence
          Length = 330

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 107 acgtcctcgagctcgaggtc 88

---

>gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH) gene, partial
           sequence
          Length = 333

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 110 acgtcctcgagctcgaggtc 91

---

>gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH) gene, partial
           sequence
          Length = 288

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 65  acgtcctcgagctcgaggtc 46

---

>gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH) gene, partial
           sequence
          Length = 333

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 110 acgtcctcgagctcgaggtc 91

---

>gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH) gene, partial
           sequence
          Length = 338

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 114 acgtcctcgagctcgaggtc 95

---

>gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH) gene, partial
           sequence
          Length = 318

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH) gene, partial
           sequence
          Length = 312

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH) gene, partial
           sequence
          Length = 315

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 92  acgtcctcgagctcgaggtc 73

---

>gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrogen reductase
           (nifH) gene, partial cds
          Length = 327

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein (nifH) gene, partial
           cds
          Length = 336

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 179 acgtcctcgagctcgaggtc 160

---

>gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clone F2 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 417

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 191 acgtcctcgagctcgaggtc 172

---

>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    ttgtcccatatttttctatt 150
              ||||||||||||||||||||
Sbjct: 111779 ttgtcccatatttttctatt 111798

---

>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete
              sequence
          Length = 202551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 491    gtgctttgaaaacagacataggga 514
              |||||||||||||| |||||||||
Sbjct: 115047 gtgctttgaaaacaaacataggga 115024

---

>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence
          Length = 140935

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 595  cttttcttcttctttatcct 614
            ||||||||||||||||||||
Sbjct: 3454 cttttcttcttctttatcct 3473

---

>gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21' nitrogenase reductase
           (nifH) gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' nitrogenase reductase
           (nifH) gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' nitrogenase reductase
           (nifH) gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 acgtcctcgagctcgaggtc 286
           ||||||||||||||||||||
Sbjct: 95  acgtcctcgagctcgaggtc 76

---

>emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chromosome 12, complete
             sequence
          Length = 193155

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   ctatatttagtacaattgtt 234
             ||||||||||||||||||||
Sbjct: 36287 ctatatttagtacaattgtt 36268

---

>gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complete sequence
          Length = 246976

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 583    ttccttagcccacttttctt 602
              ||||||||||||||||||||
Sbjct: 224303 ttccttagcccacttttctt 224322

---

>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 595  cttttcttcttctttatcct 614
            ||||||||||||||||||||
Sbjct: 3454 cttttcttcttctttatcct 3473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,118,411
Number of Sequences: 3902068
Number of extensions: 7118411
Number of successful extensions: 138921
Number of sequences better than 10.0: 245
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137429
Number of HSP's gapped (non-prelim): 1385
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---