ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27d06 |
|---|---|
| Clone Library Name | barley_pub |
>PNPP_YEAST (P19881) 4-nitrophenylphosphatase (EC 3.1.3.41) (PNPPase)| Length = 312 Score = 84.3 bits (207), Expect = 4e-16 Identities = 57/155 (36%), Positives = 84/155 (54%), Gaps = 9/155 (5%) Frame = -2 Query: 768 KFKTLGLEVTEEEIFTSSFAAAMFLK-LNKFSPEK-KVYVVGEDGILDELKLAGFECFGG 595 KF + G++V EE+IFTS +A+A++++ K P K KV+V GE GI +ELKL G+E GG Sbjct: 76 KFASFGIDVKEEQIFTSGYASAVYIRDFLKLQPGKDKVWVFGESGIGEELKLMGYESLGG 135 Query: 594 -------PEDGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLF 436 P D K+ L DK V VI GLD NY+++ +L + F Sbjct: 136 ADSRLDTPFDAAKSPFLVNGL----DKDVSCVIAGLDTKVNYHRLA-VTLQYLQKDSVHF 190 Query: 435 IATNRDPTGHMTSAQEWPGAGTMVAAVSCSVQKEP 331 + TN D T +PGAG+M+ +++ S + P Sbjct: 191 VGTNVDST-FPQKGYTFPGAGSMIESLAFSSNRRP 224
>PLPP_RAT (Q8VD52) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) (Reg I binding protein 1) Length = 309 Score = 75.5 bits (184), Expect = 2e-13 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%) Frame = -2 Query: 768 KFKTLGLE-VTEEEIFTSSFAAAMFLKLNKFSPEKK---VYVVGEDGILDELKLAGFECF 601 +F LG + EE+F+S+ AA L+ P V+V+G +G+ EL+ AG Sbjct: 71 RFARLGFTGLRAEELFSSAVCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLA 130 Query: 600 GGPEDGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNR 421 G P D D V AV+VG D++F++ K+ A +R+ P CL +AT+R Sbjct: 131 GDPGD---------------DPRVRAVLVGYDEHFSFAKLTEACAHLRD-PDCLLVATDR 174 Query: 420 DPTGHMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 DP +T PG G++ AAV + ++ +VV Sbjct: 175 DPWHPLTDGSRTPGTGSLAAAVETASGRQALVV 207
>PNPP_SCHPO (Q00472) 4-nitrophenylphosphatase (EC 3.1.3.41) (PNPPase)| Length = 298 Score = 72.4 bits (176), Expect = 1e-12 Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 2/151 (1%) Frame = -2 Query: 768 KFKTLGLEVTEEEIFTSSFAAAMFLK-LNKFSPEKKVYVVGEDGILDELKLAGFECFGGP 592 K G+ EEI+ S++++A ++K + K +KKV+V+GE GI DEL G GG Sbjct: 70 KINEHGIAAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIEDELDRVGVAHIGGT 129 Query: 591 EDGKKNIMLEANF-YFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNRDP 415 + + + + D SVGAV+ G+D + Y K A + ++P C F+ TN+D Sbjct: 130 DPSLRRALASEDVEKIGPDPSVGAVLCGMDMHVTYLKYCMAFQYL-QDPNCAFLLTNQDS 188 Query: 414 TGHMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 T T+ + PG+G + + S ++P ++ Sbjct: 189 T-FPTNGKFLPGSGAISYPLIFSTGRQPKIL 218
>PLPP_HUMAN (Q96GD0) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) Length = 296 Score = 70.1 bits (170), Expect = 7e-12 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%) Frame = -2 Query: 768 KFKTLGLE-VTEEEIFTSSFAAAMFLKLNKFSPEKK---VYVVGEDGILDELKLAGFECF 601 +F LG + E++F+S+ AA L+ P V+V+G +G+ EL+ AG Sbjct: 71 RFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLA 130 Query: 600 GGPEDGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNR 421 G P G V AV+VG D++F++ K++ A +R+ P CL +AT+R Sbjct: 131 GDPSAGDGAA-----------PRVRAVLVGYDEHFSFAKLREACAHLRD-PECLLVATDR 178 Query: 420 DPTGHMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 DP ++ PG G++ AAV + ++ +VV Sbjct: 179 DPWHPLSDGSRTPGTGSLAAAVETASGRQALVV 211
>PLPP_MOUSE (P60487) Pyridoxal phosphate phosphatase (EC 3.1.3.74) (PLP| phosphatase) Length = 292 Score = 70.1 bits (170), Expect = 7e-12 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 4/153 (2%) Frame = -2 Query: 768 KFKTLGLE-VTEEEIFTSSFAAAMFLKLNKFSPEKK---VYVVGEDGILDELKLAGFECF 601 +F LG + E++F+S+ AA L+ P V+V+G +G+ EL+ AG Sbjct: 71 RFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLA 130 Query: 600 GGPEDGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNR 421 G P + D V AV+VG D+ F++ ++ A +R+ P CL +AT+R Sbjct: 131 GDPGE---------------DPRVRAVLVGYDEQFSFSRLTEACAHLRD-PDCLLVATDR 174 Query: 420 DPTGHMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 DP ++ PG G++ AAV + ++ +VV Sbjct: 175 DPWHPLSDGSRTPGTGSLAAAVETASGRQALVV 207
>NAGD_ECOLI (P0AF24) Protein nagD| Length = 250 Score = 49.7 bits (117), Expect = 1e-05 Identities = 43/149 (28%), Positives = 64/149 (42%) Frame = -2 Query: 768 KFKTLGLEVTEEEIFTSSFAAAMFLKLNKFSPEKKVYVVGEDGILDELKLAGFECFGGPE 589 +F T G++V + +TS+ A A FL+ + KK YVVGE ++ EL AGF Sbjct: 55 RFATAGVDVPDSVFYTSAMATADFLRRQE---GKKAYVVGEGALIHELYKAGFTI----- 106 Query: 588 DGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNRDPTG 409 D + VIVG + +N+ M A+ + G FIATN D G Sbjct: 107 ---------------TDVNPDFVIVGETRSYNWDMMHKAAYFVAN--GARFIATNPDTHG 149 Query: 408 HMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 +P G + A + ++P V Sbjct: 150 R----GFYPACGALCAGIEKISGRKPFYV 174
>NAGD_ECO57 (P0AF25) Protein nagD| Length = 250 Score = 49.7 bits (117), Expect = 1e-05 Identities = 43/149 (28%), Positives = 64/149 (42%) Frame = -2 Query: 768 KFKTLGLEVTEEEIFTSSFAAAMFLKLNKFSPEKKVYVVGEDGILDELKLAGFECFGGPE 589 +F T G++V + +TS+ A A FL+ + KK YVVGE ++ EL AGF Sbjct: 55 RFATAGVDVPDSVFYTSAMATADFLRRQE---GKKAYVVGEGALIHELYKAGFTI----- 106 Query: 588 DGKKNIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNRDPTG 409 D + VIVG + +N+ M A+ + G FIATN D G Sbjct: 107 ---------------TDVNPDFVIVGETRSYNWDMMHKAAYFVAN--GARFIATNPDTHG 149 Query: 408 HMTSAQEWPGAGTMVAAVSCSVQKEPIVV 322 +P G + A + ++P V Sbjct: 150 R----GFYPACGALCAGIEKISGRKPFYV 174
>ARAL_BACSU (P94526) Arabinose operon protein araL| Length = 272 Score = 42.0 bits (97), Expect = 0.002 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 1/146 (0%) Frame = -2 Query: 753 GLEVTEEEIFTSSFAAAMFLKLN-KFSPEKKVYVVGEDGILDELKLAGFECFGGPEDGKK 577 G+E +I SS A FLK + +FS KV+V+GE G++DEL+LAG + P Sbjct: 70 GIETDVNDIVLSSSVTAAFLKKHYRFS---KVWVLGEQGLVDELRLAGVQNASEP----- 121 Query: 576 NIMLEANFYFDHDKSVGAVIVGLDQYFNYYKMQYASLCIRENPGCLFIATNRDPTGHMTS 397 K +++ L + Y + A G IATN+D + Sbjct: 122 -------------KEADWLVISLHETLTYDDLNQAFQAAA--GGARIIATNKDRSFPNED 166 Query: 396 AQEWPGAGTMVAAVSCSVQKEPIVVL 319 AG M+ A+ S Q + +V+ Sbjct: 167 GNAIDVAG-MIGAIETSAQAKTELVV 191
>SPN1_MOUSE (Q80W37) Snurportin-1 (RNA U transporter 1)| Length = 358 Score = 32.0 bits (71), Expect = 2.2 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +2 Query: 308 VTPDRTTMGSFCTEQLTAATIVPAP---GHSWADVICPVGSRLVAMKRQPGFSRIHKLAY 478 + P + + + + + ++ P G W V+CPVG R + + + S K Y Sbjct: 89 IDPSKKLPKRYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGY 148 Query: 479 CI 484 C+ Sbjct: 149 CV 150
>HIS82_NITOC (Q3J7H2) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 360 Score = 31.6 bits (70), Expect = 2.8 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -2 Query: 462 IREN-PGCLFIATNRDPTGHMTSAQEWPGAGTMVAAVSCSVQKEPIVVLSGVTTLPELQD 286 IRE P +FIA +PTG++ SA+E + A+ + E V +G T +P L+D Sbjct: 149 IRERVPAVVFIAYPNNPTGNLFSAEEL--QAIIEASPGLVIVDEAYSVFAGETFMPRLED 206
>HIS8_THIDN (Q30TC9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 364 Score = 31.6 bits (70), Expect = 2.8 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Frame = -2 Query: 585 GKKNIMLEANF--YFDHDKSVGAVIV-------GLDQYFNYYKMQYASLCIRENPGCLFI 433 G K +M F Y + K VGA ++ LD+++ YK +E P +FI Sbjct: 107 GSKILMNSITFAMYEIYSKHVGADVIRTSSQEHDLDEFYELYK--------QEKPEIIFI 158 Query: 432 ATNRDPTGHMTSAQE 388 T +PTG AQ+ Sbjct: 159 CTPNNPTGDALDAQK 173
>SPN1_RAT (Q68FP5) Snurportin-1 (RNA U transporter 1)| Length = 358 Score = 30.8 bits (68), Expect = 4.9 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 383 GHSWADVICPVGSRLVAMKRQPGFSRIHKLAYCI 484 G W V+CPVG R + + + S K YC+ Sbjct: 117 GQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV 150
>SPN1_HUMAN (O95149) Snurportin-1 (RNA U transporter 1)| Length = 360 Score = 30.8 bits (68), Expect = 4.9 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 383 GHSWADVICPVGSRLVAMKRQPGFSRIHKLAYCI 484 G W V+CPVG R + + + S K YC+ Sbjct: 116 GQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCV 149
>ATG13_CANAL (Q5A1Z5) Autophagy-related protein 13| Length = 761 Score = 30.4 bits (67), Expect = 6.3 Identities = 23/74 (31%), Positives = 30/74 (40%) Frame = +3 Query: 441 GSLDSHEYISLHTAFCNS*STDQVQQ*RLQHFCRDQSRSSPPTLCFSCHPPDHQNIQSQL 620 GS DSH + Q QQ + Q + QS+S S H H S++ Sbjct: 556 GSFDSHHH--------------QHQQQQQQQQNQQQSQSPHTNTTSSIHSHAHSYSHSRM 601 Query: 621 T*ARPKCHPHQQHK 662 ARP+ HQQ K Sbjct: 602 KDARPRSEDHQQTK 615
>VG06_BPML5 (Q05278) Minor tail protein Gp6| Length = 312 Score = 30.0 bits (66), Expect = 8.3 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -2 Query: 405 MTSAQEWPGAGTMVAAVSCSVQKEPIVVLSGVTTLPELQDASNTIHPDLYTNSVYDL 235 +TS + + G + AV + Q V++ ++ EL A NT++ D Y N YD+ Sbjct: 164 VTSRRSFDEVGVVTFAVDVTSQ----AVINFFNSVAELTGAVNTVNVDFYWNRTYDI 216
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 30.0 bits (66), Expect = 8.3 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = +1 Query: 379 SWPFLGGCHMSSRITVGRNEKAAWILTNT*ACILHFVIVEVLIKSNNDGSNTFVVIKVEV 558 SW L GC++ S I + + W+L N ++H++ V L S F I + Sbjct: 116 SWQCLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPALEDCGKGCSPIFCSISSDR 175 Query: 559 R 561 R Sbjct: 176 R 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 114,247,796 Number of Sequences: 219361 Number of extensions: 2473130 Number of successful extensions: 6756 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 6522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6747 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 8184414220 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
