ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27a07 |
|---|---|
| Clone Library Name | barley_pub |
>DCN1L_DROME (Q9VUQ8) DCN1-like protein (Defective in cullin neddylation protein| 1-like protein) Length = 288 Score = 168 bits (426), Expect = 1e-41 Identities = 75/151 (49%), Positives = 107/151 (70%) Frame = -3 Query: 647 VMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNF 468 ++L+I+W A CEF+R EFI+G+ +G+DSI+KL+ KLP L E+ D KF++ Y+F Sbjct: 97 LVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKLPILEQELNDAGKFKDFYHF 156 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEF 288 F +A++ GQK + LE AI W ++ + R + +D WCQFL+ +H +AISRDTW+ LL+F Sbjct: 157 TFNYAKDPGQKGIDLEMAIAYWCIVLSGR-FKFLDIWCQFLEEKHKRAISRDTWNLLLDF 215 Query: 287 VKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 195 ID +SNYD EGAWP LID+FVE+ EN Sbjct: 216 ATNIDDRMSNYDSEGAWPVLIDDFVEWCQEN 246
>DCNL2_HUMAN (Q6PH85) DCN1-like protein 2 (Defective in cullin neddylation| protein 2-like protein 2) (DCUN1 domain-containing protein 2) Length = 259 Score = 162 bits (409), Expect = 1e-39 Identities = 74/146 (50%), Positives = 102/146 (69%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFA 465 +LVI+W +AAT CEF+R+EF+DG+ +G DS+EKL+ LP L E+KD KF++ Y F Sbjct: 102 VLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLKALLPRLEQELKDTAKFKDFYQFT 161 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFV 285 F +A+ GQK L LE A+ W+L+ + R + +D W FL H ++I RDTW+ LL+F Sbjct: 162 FTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLMEHHKRSIPRDTWNLLLDFG 220 Query: 284 KTIDPELSNYDEEGAWPYLIDEFVEY 207 I ++SNYDEEGAWP LID+FVEY Sbjct: 221 NMIADDMSNYDEEGAWPVLIDDFVEY 246
>DCNL2_MOUSE (Q8BZJ7) DCN1-like protein 2 (Defective in cullin neddylation| protein 2-like protein 2) (DCUN1 domain-containing protein 2) Length = 258 Score = 157 bits (398), Expect = 2e-38 Identities = 73/146 (50%), Positives = 103/146 (70%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFA 465 +LVI+W +AAT CEF+++EF+DG+ +G DS E+L+ LP L E+KD KF+++Y F Sbjct: 102 VLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPRLEQELKDPAKFKDLYQFT 161 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFV 285 F +A+ GQK L LE A+ W+L+ + R + +D W FL+ H ++I RDTW+ LL+F Sbjct: 162 FTFAKNPGQKGLDLEMAVAYWKLVLSGR-FKFLDLWNTFLE-HHKRSIPRDTWNLLLDFG 219 Query: 284 KTIDPELSNYDEEGAWPYLIDEFVEY 207 I +LSNYDEEGAWP LID+FVEY Sbjct: 220 NMIADDLSNYDEEGAWPVLIDDFVEY 245
>DCNL1_MOUSE (Q9QZ73) DCN1-like protein 1 (Defective in cullin neddylation| protein 1-like protein 1) (DCUN1 domain-containing protein 1) (Testis-specific protein 3) Length = 259 Score = 155 bits (392), Expect = 1e-37 Identities = 69/146 (47%), Positives = 102/146 (69%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFA 465 +L+I+W +AAT CEF++QEF+DG+ +G DSIEKL+ ++P + E+K+ +F++ Y F Sbjct: 102 VLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFT 161 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFV 285 F +A+ GQK L LE AI W L+ R + +D W +FL H ++I +DTW+ LL+F Sbjct: 162 FNFAKNPGQKGLDLEMAIAYWNLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220 Query: 284 KTIDPELSNYDEEGAWPYLIDEFVEY 207 I ++SNYDEEGAWP LID+FVE+ Sbjct: 221 SMIADDMSNYDEEGAWPVLIDDFVEF 246
>DCNL1_HUMAN (Q96GG9) DCN1-like protein 1 (Defective in cullin neddylation| protein 1-like protein 1) (DCUN1 domain-containing protein 1) (Squamous cell carcinoma-related oncogene) Length = 259 Score = 155 bits (391), Expect = 1e-37 Identities = 69/146 (47%), Positives = 102/146 (69%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFA 465 +L+I+W +AAT CEF++QEF+DG+ +G DSIEKL+ ++P + E+K+ +F++ Y F Sbjct: 102 VLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFT 161 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFV 285 F +A+ GQK L LE AI W L+ R + +D W +FL H ++I +DTW+ LL+F Sbjct: 162 FNFAKNPGQKGLDLEMAIAYWNLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220 Query: 284 KTIDPELSNYDEEGAWPYLIDEFVEY 207 I ++SNYDEEGAWP LID+FVE+ Sbjct: 221 TMIADDMSNYDEEGAWPVLIDDFVEF 246
>DCNL1_CHICK (Q5ZKU1) DCN1-like protein 1 (Defective in cullin neddylation| protein 1-like protein 1) (DCUN1 domain-containing protein 1) Length = 259 Score = 152 bits (384), Expect = 8e-37 Identities = 68/146 (46%), Positives = 101/146 (69%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFA 465 +L+I+W +AAT CEF++ EF+DG+ +G DSIEKL+ ++P + E+K+ +F++ Y F Sbjct: 102 VLIIAWKFRAATQCEFSKLEFMDGMTELGCDSIEKLKAQIPKMEQELKEPGRFKDFYQFT 161 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFV 285 F +A+ GQK L LE AI W L+ R + +D W +FL H ++I +DTW+ LL+F Sbjct: 162 FNFAKNPGQKGLDLEMAIAYWNLVLNGR-FKFLDLWNKFLLEHHKRSIPKDTWNLLLDFS 220 Query: 284 KTIDPELSNYDEEGAWPYLIDEFVEY 207 I ++SNYDEEGAWP LID+FVE+ Sbjct: 221 TMIADDMSNYDEEGAWPVLIDDFVEF 246
>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 280 Score = 137 bits (344), Expect = 4e-32 Identities = 72/147 (48%), Positives = 98/147 (66%) Frame = -3 Query: 647 VMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNF 468 VMLV++W + A +M FT QE++ G+ S+ DS EKLR L LR+ + D F+ IY + Sbjct: 128 VMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRY 187 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEF 288 AF +AREK Q+SL L TA M LL + WPL + QFL+ K I++D W +LEF Sbjct: 188 AFDFAREKDQRSLDLNTAKCMLGLLLG-KTWPLFPVFNQFLEQSKYKVINKDQWCNVLEF 246 Query: 287 VKTIDPELSNYDEEGAWPYLIDEFVEY 207 +TI+ +LSNYDE+GAWP L+DEFVE+ Sbjct: 247 SRTINLDLSNYDEDGAWPVLLDEFVEW 273
>DCNL4_HUMAN (Q92564) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 292 Score = 134 bits (338), Expect = 2e-31 Identities = 70/147 (47%), Positives = 97/147 (65%) Frame = -3 Query: 647 VMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNF 468 VMLV++W + A M FT QE++ G+ S+ D+ EKLR L LR+ + D F+ IY + Sbjct: 140 VMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRY 199 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEF 288 AF +AREK Q+SL + TA M LL + WPL + QFL+ K I++D W +LEF Sbjct: 200 AFDFAREKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLEQSKYKVINKDQWCNVLEF 258 Query: 287 VKTIDPELSNYDEEGAWPYLIDEFVEY 207 +TI+ +LSNYDE+GAWP L+DEFVE+ Sbjct: 259 SRTINLDLSNYDEDGAWPVLLDEFVEW 285
>DCNL4_MOUSE (Q8CCA0) DCN1-like protein 4 (Defective in cullin neddylation| protein 1-like protein 4) (DCUN1 domain-containing protein 4) Length = 292 Score = 133 bits (335), Expect = 4e-31 Identities = 70/147 (47%), Positives = 96/147 (65%) Frame = -3 Query: 647 VMLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNF 468 VMLV++W + A M FT QE++ G+ S+ D+ EKLR L LR+ + D F+ IY + Sbjct: 140 VMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRY 199 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEF 288 AF +AREK Q+SL + TA M LL + WPL + QFL+ K I++D W +LEF Sbjct: 200 AFDFAREKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLEQSKYKVINKDQWCNVLEF 258 Query: 287 VKTIDPELSNYDEEGAWPYLIDEFVEY 207 +TI +LSNYDE+GAWP L+DEFVE+ Sbjct: 259 SRTISLDLSNYDEDGAWPVLLDEFVEW 285
>DCN1_CAEEL (Q9U3C8) Defective in cullin neddylation protein 1| Length = 295 Score = 125 bits (313), Expect = 1e-28 Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 21/171 (12%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDH-KFREIYNF 468 +LV++W A T CEF+ E++ G+ ++ D+++ LR+++ S+ + ++ D KF E+Y F Sbjct: 105 VLVLAWKFTAQTQCEFSLDEWVKGMTALQADTVQNLRQRIDSINSGLESDKAKFHELYLF 164 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKA------------ 324 AF +A+ ++L LETAI W +LF +R ++ W FL + N A Sbjct: 165 AFNYAKSAACRNLDLETAICCWDVLFGQRS-TIMTQWIDFLWAQENAAASRLAQNVGASN 223 Query: 323 --------ISRDTWSQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 195 ISRDTW+ +F+ P+LS+YD+EGAWP LID+FV+Y EN Sbjct: 224 AKQFKSVWISRDTWNLFWDFILLSKPDLSDYDDEGAWPVLIDQFVDYCREN 274
>DCN1_CAEBR (Q60YT5) Defective in cullin neddylation protein 1| Length = 292 Score = 117 bits (293), Expect = 3e-26 Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 21/171 (12%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDD-HKFREIYNF 468 +L+++W KA T CEF+ QEF +G+ S+ VDSI+ L++K+ +L A +K D K R++ F Sbjct: 103 VLILAWVFKAETQCEFSLQEFTNGMASLQVDSIQGLKQKIDALDAGMKADLTKTRDLCIF 162 Query: 467 AFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKA------------ 324 F + + +SL LE AI W ++F R PL+ W FL + A Sbjct: 163 TFNYGKSAASRSLDLEMAICYWDVIFGARK-PLMSQWIDFLYGQERMAYARLEEELGPTN 221 Query: 323 --------ISRDTWSQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTEN 195 I+RDTW+ +F+ +LS+YDEEGAWP LID+FV++ EN Sbjct: 222 AKKVKSVWITRDTWNLFWDFIVLGKEDLSDYDEEGAWPVLIDQFVDHCREN 272
>DCN1_CRYNE (Q5KHV1) Defective in cullin neddylation protein 1| Length = 279 Score = 108 bits (270), Expect = 1e-23 Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 25/160 (15%) Frame = -3 Query: 602 EFTRQEFIDGLQSI--GVDSIEKLREKLPSLRAE-IKDDHKFREIYNFAFAWAREKGQ-- 438 E+ + F+ G+ S +DS+ KL+ LP+LR + + D F+++YN AF AR Q Sbjct: 116 EWEKAPFVAGIASYPGNIDSLPKLKAYLPTLRKKLVSDPEYFKKVYNHAFQLARGGPQSL 175 Query: 437 -KSLPLETAIGMWRLLF--AERHWPL-----------------IDHWCQFLQVRHNKAIS 318 +SLPL+TAI +W L F A H P D W +F+Q + NKA+S Sbjct: 176 TRSLPLDTAIDLWTLFFPPAFNHSPSALSHLPDNSPPQFTQPEFDLWIEFMQQK-NKAVS 234 Query: 317 RDTWSQLLEFVKTIDPELSNYDEEGAWPYLIDEFVEYLTE 198 +DTW+ L++F + ID + YDE+GAWP +ID+FVEY+ E Sbjct: 235 KDTWALLVDFARGIDKDFKEYDEDGAWPSMIDDFVEYVRE 274
>DCN1_YARLI (Q6C0B6) Defective in cullin neddylation protein 1| Length = 240 Score = 107 bits (266), Expect = 4e-23 Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 9/158 (5%) Frame = -3 Query: 644 MLVISWHMKAATMCEFTRQEFIDGLQSIGVDSI-------EKLREKLPSLRAEIKDDHKF 486 +L ++ + ++ FTR+ F++G +IG D++ E + SL A+ F Sbjct: 90 VLAVAMTAGSPSVGTFTRKPFVEGWAAIGGDTLPAQQKLCRSFAESMTSLNAD------F 143 Query: 485 REIYNFAFAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRDTW 306 ++IY F + + ++GQ+ LP ETA+ WRLL ++ L D W F+ ++ + ISRD W Sbjct: 144 QKIYKFTYGFLLQEGQRVLPQETAVDYWRLLLTGKYEHL-DKWLSFVTEKYKRNISRDAW 202 Query: 305 SQLLEFV--KTIDPELSNYDEEGAWPYLIDEFVEYLTE 198 + L EF+ + DP L +YDE+GAWP +IDE+VE+L E Sbjct: 203 NMLYEFMLFQAKDPSLESYDEDGAWPSVIDEYVEFLKE 240
>DCN1_USTMA (Q4PF67) Defective in cullin neddylation protein 1| Length = 319 Score = 101 bits (251), Expect = 2e-21 Identities = 59/188 (31%), Positives = 101/188 (53%), Gaps = 37/188 (19%) Frame = -3 Query: 647 VMLVISWHMKAATMCEFTRQEFIDGLQSIGV-DSIEKLREKLPSLRAEIKDDHKFR---- 483 V L +S+++K+A+M FTR+ +I+G + + + D+I+K ++ L LR E+ D+ R Sbjct: 122 VFLPLSYYLKSASMGTFTREGYINGWKMLDLSDTIDKQKKTLEKLRQELLDNKPLRLERI 181 Query: 482 -------------------EIYNFAFAWAREKGQKSLPLETAIGMWRLLFAERHW----- 375 ++Y + +A+AR +GQKSL LE A+ W L+ Sbjct: 182 AQEKSNPATASGANKGLYEKVYEYTYAFARREGQKSLALENALAFWDLVLPASPTFQRAG 241 Query: 374 -------PLIDHWCQFLQVR-HNKAISRDTWSQLLEFVKTIDPELSNYDEEGAWPYLIDE 219 +D W +FL + +A+S+DTW Q L+F K I+ + SN+D + AWP +ID+ Sbjct: 242 SQGTFTQAQLDLWKRFLSEQTRGRAVSKDTWMQFLDFTKEINSDFSNHDFDAAWPSIIDD 301 Query: 218 FVEYLTEN 195 FV ++ +N Sbjct: 302 FVLWVRDN 309
>DCN1_SCHPO (Q8WZK4) Defective in cullin neddylation protein 1| Length = 251 Score = 100 bits (249), Expect = 4e-21 Identities = 55/155 (35%), Positives = 93/155 (60%), Gaps = 5/155 (3%) Frame = -3 Query: 641 LVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFRE-IYNFA 465 L++S+ +K+ M EF R+ F++G ++ S+++L+ + + D ++ IY + Sbjct: 92 LLVSYFLKSPRMGEFHRESFVEGALNLSTTSLDQLKLAIKEKVQVWRSDASLQKAIYIYT 151 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRH--NKAISRDTWSQLLE 291 + A +KG+K+L AI +++L + +PL+D W FL+V K++ +DTW++L + Sbjct: 152 YPLACDKGKKTLSTSIAIEFFQILLKDT-FPLLDDWIAFLKVSPIIEKSLPKDTWNELWD 210 Query: 290 FVKTI--DPELSNYDEEGAWPYLIDEFVEYLTENG 192 F + DP SNYD EGAWP LIDEFV Y E+G Sbjct: 211 FSVFVKSDPNCSNYDFEGAWPTLIDEFVSYYREHG 245
>DCN1_EMENI (Q5AWS1) Defective in cullin neddylation protein 1| Length = 308 Score = 90.1 bits (222), Expect = 5e-18 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 12/158 (7%) Frame = -3 Query: 641 LVISWHMKAATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEI-KDDHKFREIYNFA 465 L I+ +++ +M EFTR+ F++G +S+ DSI K+ +LR I + FR +Y + Sbjct: 139 LAIAELLQSPSMGEFTREGFLNGWRSVQCDSIAKMAAHAANLRTRIPSEPDLFRRVYRYT 198 Query: 464 FAWAREKGQKSLPLETAIGMWRLLFAERH----W-----PLIDHWCQFLQVRHNKAISRD 312 F +GQ++L E A+ W L F W P +D W +FL+ R K +++D Sbjct: 199 FPLCLVQGQRNLQFEIAVEQWNLFFTTPKGGIAWNTTTTPWLDWWVEFLEERGKKPVNKD 258 Query: 311 TWSQLLEFVKTI--DPELSNYDEEGAWPYLIDEFVEYL 204 W Q+ F++ D + E+GAWP +D+FV ++ Sbjct: 259 LWQQVEVFMRKTHEDEAFGWWSEDGAWPGTLDDFVAWV 296
>DCN1_CANGA (Q6FJR2) Defective in cullin neddylation protein 1| Length = 273 Score = 85.9 bits (211), Expect = 9e-17 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 14/147 (9%) Frame = -3 Query: 596 TRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHK-FREIYNFAFAWAREKGQKSLPLE 420 T ++F+ + G ++E++R L ++ +D K F IYN++F K Q + + Sbjct: 124 TEKQFLYFWYNEGCYTLEQMRHYLEDCERKLCNDWKYFTTIYNYSFDLNASK-QGVVETD 182 Query: 419 TAIGMWRLLFAERHWPL----------IDHWCQFLQVRHNKAISRDTWSQLLEFVK---T 279 AI W+L F E L +D WC+FLQ H K I +DTW LL F K + Sbjct: 183 IAIEYWKLFFEENRTKLSGIIKVDQAHLDLWCKFLQDEHKKLIHKDTWQMLLLFFKKFPS 242 Query: 278 IDPELSNYDEEGAWPYLIDEFVEYLTE 198 +D + Y+E AWPY IDEF EYL E Sbjct: 243 LDAIKTEYNEADAWPYTIDEFYEYLEE 269
>DCN1_YEAST (Q12395) Defective in cullin neddylation protein 1| Length = 269 Score = 81.3 bits (199), Expect = 2e-15 Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 10/142 (7%) Frame = -3 Query: 593 RQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHK-FREIYNFAFAWAREKGQKSLPLET 417 R++F+ G +I ++E + +L ++ +D + F +IYN+AF + +K + + Sbjct: 127 REDFLSTWFMQGCSTISDMQECIKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDE 186 Query: 416 AIGMWRLLFAERHWP------LIDHWCQFLQVRHNKAISRDTWSQLLEFVK---TIDPEL 264 I W+L F + +P L++ W +FL+ IS+DTW LL F K TI + Sbjct: 187 GIQYWKLFF-QPEYPVRMEPDLLEAWFRFLRDEGKTTISKDTWRMLLLFFKRYPTIQKII 245 Query: 263 SNYDEEGAWPYLIDEFVEYLTE 198 S+YDE AWP++IDEF E L + Sbjct: 246 SDYDETAAWPFIIDEFYECLQD 267
>DCN1_MAGGR (Q52DM9) Defective in cullin neddylation protein 1| Length = 281 Score = 77.8 bits (190), Expect = 3e-14 Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 21/165 (12%) Frame = -3 Query: 623 MKAATMCEFTRQEFIDGLQSIGVDSIEK-LREKLPSLRAEIKDDHK-FREIYNFAFAWAR 450 +KA TR F++G Q+ + + ++ + S+ + DH+ F+ +Y AF R Sbjct: 106 VKAPAFGVITRSGFVEGWQATNAPASKSGQKDYIQSVIRNLPQDHELFKRVYRHAFIAGR 165 Query: 449 EKG-QKSLPLETAIGMWRLLFA-----ERHW-----------PLIDHWCQFLQVRHNKAI 321 E Q++LPLE A+ W+ F + W +D W ++L+ ++ + Sbjct: 166 ETPEQRALPLENALVYWQCFFGPEMPHSKPWVAKSSQSGGTTDFLDLWTEYLKNNWSRTV 225 Query: 320 SRDTWSQLLEFV--KTIDPELSNYDEEGAWPYLIDEFVEYLTENG 192 S+D W+Q L+F T D LS + EG+WP +ID FVE+L G Sbjct: 226 SKDMWNQTLDFAVKSTADSTLSFWTPEGSWPSVIDGFVEWLRNKG 270
>DCN1_ASHGO (Q750Y3) Defective in cullin neddylation protein 1| Length = 256 Score = 71.2 bits (173), Expect = 2e-12 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%) Frame = -3 Query: 602 EFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHK-FREIYNFAFAWAREKGQKSLP 426 + +R +F+ +G S+ +R + +L ++ D FR +Y + F + G + L Sbjct: 109 DISRFQFLSTWHGLGCSSLPDMRAAVDALELRLRTDAAYFRALYAYTFGLGLDAGGRRLS 168 Query: 425 LETAIGMWRLLFAERHW------PLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDPE- 267 +ETAI W L F + + P + W +FL+ + ++SRDTW F + + Sbjct: 169 VETAIAYWSLFFLDHTYAVTVPAPRLRSWFEFLRA-GDHSVSRDTWDMFPRFAQRFPDDT 227 Query: 266 --LSNYDEEGAWPYLIDEFVEYL 204 L +Y+E +WP +IDE+ E++ Sbjct: 228 ELLEHYNELASWPLVIDEYYEWV 250
>DCN1_CANAL (Q5ADL9) Defective in cullin neddylation protein 1| Length = 304 Score = 67.8 bits (164), Expect = 3e-11 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 25/121 (20%) Frame = -3 Query: 491 KFREIYNFAFAWARE-KGQKSLPLETAIGMWRLL-----------------FAERHWPLI 366 KF+++YNF F ++ E + QK L L+TAI W+LL F + Sbjct: 178 KFQDLYNFTFKFSLETESQKFLDLDTAIEYWKLLLPIITETYSKDNKLDEEFKNHVNERV 237 Query: 365 DHWCQFL---QVRHNKAISRDTWSQLLEFVKTI---DP-ELSNYDEEGAWPYLIDEFVEY 207 + W +FL + K+IS D+WS F K I DP + +YDE AWP ++DEF+EY Sbjct: 238 EQWFKFLTDTEYMTKKSISYDSWSMFYLFFKEIVLIDPIKFKDYDEMAAWPSVVDEFLEY 297 Query: 206 L 204 L Sbjct: 298 L 298
>PQQF_PSEFL (P55174) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 829 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = -3 Query: 614 ATMCEFTRQEFIDGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAF-AWARE 447 A CE + F + S +E+L E L R ++D H+ RE+ + F AW+R+ Sbjct: 94 ARTCERATEFFFELPASAFAGGLERLCEMLAQPRMSLEDQHREREVLHAEFIAWSRD 150
>PYR1_EMENI (O93937) Protein pyrABCN [Includes: Glutamine-dependent| carbamoyl-phosphate (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2)] Length = 2275 Score = 25.4 bits (54), Expect(2) = 2.0 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 Query: 123 KHDSCR*IEYLCLDVGI 73 KH S R I LCLDVG+ Sbjct: 257 KHPSSRPIRVLCLDVGL 273 Score = 24.6 bits (52), Expect(2) = 2.0 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 326 AISRDTWSQLLEFVKTIDPELSNYDEE 246 A+++DTW E + +DP N E Sbjct: 213 ALAQDTWKSSFEQIDWVDPNTKNLVSE 239
>SYL_NEIMA (Q9JW39) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 910 Score = 31.2 bits (69), Expect = 2.8 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Frame = -3 Query: 578 DGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWAREKGQKSLPLETAIGMWR 399 DGL ++ LR KL S A++ DD+ R+ +N A A E + +T R Sbjct: 744 DGLSK----ELKDLRHKLHSTIAKVSDDYGRRQQFNTAIAAVMELLNQYDKTDTGSEQGR 799 Query: 398 LLFAE-------RHWPLIDHWCQFLQVRHNKA 324 + E WP++ H C+ L N A Sbjct: 800 TVAQEVLEAAVRLLWPIVPHICETLWSELNGA 831
>SYL_NEIMB (Q9JXT2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 876 Score = 30.8 bits (68), Expect = 3.6 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 15/100 (15%) Frame = -3 Query: 578 DGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWARE---------------K 444 DGL ++ LR KL + A++ DD+ R+ +N A A E + Sbjct: 710 DGLSK----ELKDLRHKLHATTAKVSDDYGRRQQFNTAIAAVMELLNQYDKTDTGGEQGR 765 Query: 443 GQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKA 324 LETA+ RLL WP++ H C+ L N A Sbjct: 766 AVAQEVLETAV---RLL-----WPIVPHICETLWSELNGA 797
>RECG_MYCTU (P64322) ATP-dependent DNA helicase recG (EC 3.6.1.-)| Length = 737 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -3 Query: 557 VDSIEKLREKLPS-LRAE---IKDDHKFREIYNFAFAWAREKGQKSLPLETAIGMWRLLF 390 +D ++++ + LP+ LRA+ I +D R I+ RE+ ++ L + A+G+ L Sbjct: 196 LDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARERLTFDEAVGLQWALV 255 Query: 389 AERHWPL 369 A RH L Sbjct: 256 ARRHGEL 262
>RECG_MYCBO (P64323) ATP-dependent DNA helicase recG (EC 3.6.1.-)| Length = 737 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -3 Query: 557 VDSIEKLREKLPS-LRAE---IKDDHKFREIYNFAFAWAREKGQKSLPLETAIGMWRLLF 390 +D ++++ + LP+ LRA+ I +D R I+ RE+ ++ L + A+G+ L Sbjct: 196 LDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARERLTFDEAVGLQWALV 255 Query: 389 AERHWPL 369 A RH L Sbjct: 256 ARRHGEL 262
>EST2_HUMAN (O00748) Carboxylesterase 2 precursor (EC 3.1.1.1) (CE-2) (hCE-2)| Length = 559 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 Query: 380 HWPLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDPE 267 HWPL D Q+LQ+ A+ R + L+F K P+ Sbjct: 507 HWPLFDQEEQYLQLNLQPAVGRALKAHRLQFWKKALPQ 544
>TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Antigen tmpB)| Length = 384 Score = 29.6 bits (65), Expect = 8.0 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = -3 Query: 449 EKGQKSLPLETAIGMWRLLFAERHWPLIDHWCQFLQVRHNKAISRD--TWSQLLEFVKTI 276 EKG+K LP E + W+L D C F + N A+ D W +L E K Sbjct: 294 EKGEKVLPSEYKVLTWKL----------DREC-FWNIAKNPAVYNDPFMWRKLYEANKDK 342 Query: 275 DPELSNYD 252 PE +N D Sbjct: 343 IPESNNPD 350 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,864,751 Number of Sequences: 219361 Number of extensions: 2026572 Number of successful extensions: 4806 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4667 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4777 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
