| Clone Name | rbasd26j20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463026.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.2 mRNA Length = 1115 Score = 168 bits (85), Expect = 3e-39 Identities = 136/155 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 710 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 651 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 650 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 591 Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155 ||||| ||||||||| || |||||| ||||||| Sbjct: 590 tggtgtgccaagcttttggggaaatatagattcat 556
>dbj|AK104547.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C06, full insert sequence Length = 1065 Score = 168 bits (85), Expect = 3e-39 Identities = 136/155 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 650 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 591 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 590 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 531 Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155 ||||| ||||||||| || |||||| ||||||| Sbjct: 530 tggtgtgccaagcttttggggaaatatagattcat 496
>dbj|AK099558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034B14, full insert sequence Length = 1071 Score = 168 bits (85), Expect = 3e-39 Identities = 136/155 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 667 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 608 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 607 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 548 Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155 ||||| ||||||||| || |||||| ||||||| Sbjct: 547 tggtgtgccaagcttttggggaaatatagattcat 513
>dbj|AK098953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M06, full insert sequence Length = 1039 Score = 168 bits (85), Expect = 3e-39 Identities = 136/155 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 660 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 601 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 600 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 541 Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155 ||||| ||||||||| || |||||| ||||||| Sbjct: 540 tggtgtgccaagcttttggggaaatatagattcat 506
>dbj|AK061735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D08, full insert sequence Length = 1072 Score = 168 bits (85), Expect = 3e-39 Identities = 136/155 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 654 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 595 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 594 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 535 Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155 ||||| ||||||||| || |||||| ||||||| Sbjct: 534 tggtgtgccaagcttttggggaaatatagattcat 500
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 155 bits (78), Expect = 5e-35 Identities = 115/129 (89%) Strand = Plus / Plus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 165661 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 165720 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 165721 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 165780 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 165781 tggtgtgcc 165789
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 5e-35 Identities = 115/129 (89%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 20919617 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 20919558 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 20919557 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 20919498 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 20919497 tggtgtgcc 20919489
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 5e-35 Identities = 115/129 (89%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 20912646 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 20912587 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 20912586 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 20912527 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 20912526 tggtgtgcc 20912518
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 155 bits (78), Expect = 5e-35 Identities = 115/129 (89%) Strand = Plus / Plus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct: 3306 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 3365 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 3366 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 3425 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 3426 tggtgtgcc 3434
>ref|XM_480217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 139 bits (70), Expect = 3e-30 Identities = 113/129 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| ||||||||||||||||||||| ||| || ||||||||||| Sbjct: 318 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 259 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 258 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 199 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 198 tggtgtgcc 190
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 139 bits (70), Expect = 3e-30 Identities = 113/129 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| ||||||||||||||||||||| ||| || ||||||||||| Sbjct: 3720875 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 3720816 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 3720815 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 3720756 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 3720755 tggtgtgcc 3720747
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 139 bits (70), Expect = 3e-30 Identities = 113/129 (87%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60 |||||| ||||| ||||| ||||||||||||||||||||| ||| || ||||||||||| Sbjct: 44372 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 44313 Query: 61 ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| ||||||||||| |||||||||||| |||||||| ||||||||||| || || || Sbjct: 44312 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 44253 Query: 121 tggtgngcc 129 ||||| ||| Sbjct: 44252 tggtgtgcc 44244
>gb|BT016208.1| Zea mays clone Contig41 mRNA sequence Length = 1041 Score = 119 bits (60), Expect = 3e-24 Identities = 129/154 (83%) Strand = Plus / Plus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 ||||| ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 349 agatgggcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggca 408 Query: 62 taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121 ||| ||||||||||| |||||| || || || || || ||||||||||| ||||| ||| Sbjct: 409 taaacacgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaat 468 Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155 |||| |||||| || || |||||| |||||||| Sbjct: 469 ggtgtgccaagtttttgaggaaatatggattcat 502
>gb|AY104572.1| Zea mays PCO087857 mRNA sequence Length = 1332 Score = 119 bits (60), Expect = 3e-24 Identities = 129/154 (83%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 ||||| ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||| Sbjct: 752 agatgggcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggca 693 Query: 62 taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121 ||| ||||||||||| |||||| || || || || || ||||||||||| ||||| ||| Sbjct: 692 taaacacgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaat 633 Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155 |||| |||||| || || |||||| |||||||| Sbjct: 632 ggtgtgccaagtttttgaggaaatatggattcat 599
>gb|BT017985.1| Zea mays clone EL01N0525F07.c mRNA sequence Length = 1171 Score = 95.6 bits (48), Expect = 4e-17 Identities = 126/154 (81%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| | |||||| Sbjct: 826 agatgggcctcctctttaaggctaacaatcttctggaaatgggagtggtaggtatgggca 767 Query: 62 taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121 || | |||||||| |||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 766 tagacccgaaacaatcgcttgaatattgtatttactacttccttgaagttcggtggaaat 707 Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155 || | |||||| || || |||||| |||||||| Sbjct: 706 ggcgtgccaagtttttgaggaaatatggattcat 673
>gb|BT014231.1| Lycopersicon esculentum clone 133430F, mRNA sequence Length = 959 Score = 81.8 bits (41), Expect = 6e-13 Identities = 94/113 (83%) Strand = Plus / Minus Query: 8 gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67 ||||| ||||| || || ||||| ||||||||||||||||| || || || ||||| || Sbjct: 677 gcctcctccttaagactcacaattttctgaaaatgggaatgataaatatgtgcatacaca 618 Query: 68 cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 ||||| | ||| |||||||| || |||||||||||||||||||||||||| Sbjct: 617 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttgggtggaaa 565
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence Length = 163635 Score = 71.9 bits (36), Expect = 5e-10 Identities = 95/116 (81%) Strand = Plus / Plus Query: 8 gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67 ||||| ||||| || || ||||| |||||||||||||| || || || || ||||| || Sbjct: 117911 gcctcctccttaagactcacaattttctgaaaatgggagtgataaatatgtgcatacaca 117970 Query: 68 cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaatgg 123 ||||| | ||| |||||||| || ||||||||||||||||||| ||||||||| Sbjct: 117971 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttggatggaaatgg 118026
>gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone CB3A14, complete sequence Length = 79178 Score = 65.9 bits (33), Expect = 3e-08 Identities = 92/113 (81%) Strand = Plus / Minus Query: 8 gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67 ||||| ||||| || || ||||| |||||||||||||| || || || || ||||| || Sbjct: 14564 gcctcctccttaagactcacaattttctgaaaatgggagtgataaatatgtgcatacaca 14505 Query: 68 cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 ||||| | ||| |||||||| || ||||||||||||||||||| |||||| Sbjct: 14504 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttggatggaaa 14452
>emb|AJ635583.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons 1-3, allele mutant Length = 1693 Score = 56.0 bits (28), Expect = 3e-05 Identities = 93/116 (80%) Strand = Plus / Minus Query: 5 tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64 ||||| |||||||| | || ||||||||||||||| | || || || ||||| ||||| Sbjct: 1345 tgagcttcttccttcaaactcacaatcttctgaaaacgtgagtgataaatgtgagcatat 1286 Query: 65 ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| || || |||||| ||||| || |||||||| |||||||||||||||| Sbjct: 1285 acacggaataatcgcttgaatattgtcttgacaacatctctgaagttgggtggaaa 1230
>emb|AJ920380.1| Poa pratensis partial mRNA for Mob1-like protein (mob1 gene) Length = 654 Score = 54.0 bits (27), Expect = 1e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1 aagatgagcctcttccttnaggctgacaatcttctgaaaatg 42 |||||| || |||||||| |||||||||||||| |||||||| Sbjct: 543 aagatgggcttcttccttgaggctgacaatcttttgaaaatg 502
>ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative F-box protein family (OSJNAa0011L09.13), mRNA Length = 3459 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Minus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 3338 tcttccttgaggctcacaatcttctgaaaatg 3307
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Plus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 71456 tcttccttgaggctcacaatcttctgaaaatg 71487
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Minus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 145832 tcttccttgaggctcacaatcttctgaaaatg 145801
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Plus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 12775017 tcttccttgaggctcacaatcttctgaaaatg 12775048
>dbj|AK120220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041G09, full insert sequence Length = 1123 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Minus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 766 tcttccttgaggctcacaatcttctgaaaatg 735
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.002 Identities = 30/32 (93%) Strand = Plus / Plus Query: 11 tcttccttnaggctgacaatcttctgaaaatg 42 |||||||| ||||| ||||||||||||||||| Sbjct: 12782358 tcttccttgaggctcacaatcttctgaaaatg 12782389
>ref|NM_123923.3| Arabidopsis thaliana unknown protein AT5G45550 mRNA, complete cds Length = 896 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 603 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 544 Query: 62 taa 64 ||| Sbjct: 543 taa 541
>gb|AY117158.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 679 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 536 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 477 Query: 62 taa 64 ||| Sbjct: 476 taa 474
>gb|AY045864.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 911 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 601 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 542 Query: 62 taa 64 ||| Sbjct: 541 taa 539
>dbj|AK222194.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL24-23-A15 Length = 555 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 178 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 119 Query: 62 taa 64 ||| Sbjct: 118 taa 116
>emb|BX834019.1|CNS09ZAI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 812 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 575 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 516 Query: 62 taa 64 ||| Sbjct: 515 taa 513
>emb|BX832788.1|CNS09Z5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 865 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 571 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 512 Query: 62 taa 64 ||| Sbjct: 511 taa 509
>gb|AY086730.1| Arabidopsis thaliana clone 27099 mRNA, complete sequence Length = 883 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 601 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 542 Query: 62 taa 64 ||| Sbjct: 541 taa 539
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19 Length = 85020 Score = 48.1 bits (24), Expect = 0.008 Identities = 53/63 (84%) Strand = Plus / Minus Query: 2 agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61 |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| ||| Sbjct: 83902 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 83843 Query: 62 taa 64 ||| Sbjct: 83842 taa 83840
>emb|AM161645.1| Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1-B gene) Length = 880 Score = 48.1 bits (24), Expect = 0.008 Identities = 92/116 (79%) Strand = Plus / Minus Query: 5 tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64 ||||| |||||||| | || ||||||||||||||||| || || || ||||| ||||| Sbjct: 768 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaatgtgagcatat 709 Query: 65 ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| || || ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 708 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 653
>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone BACR37P12, complete sequence Length = 181103 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 aatgggaatggtatatgtggg 59 ||||||||||||||||||||| Sbjct: 61669 aatgggaatggtatatgtggg 61649
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 aatgggaatggtatatgtggg 59 ||||||||||||||||||||| Sbjct: 96438 aatgggaatggtatatgtggg 96418
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aatgggaatggtatatgtggg 59 ||||||||||||||||||||| Sbjct: 43340 aatgggaatggtatatgtggg 43360
>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete sequence Length = 156186 Score = 42.1 bits (21), Expect = 0.49 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 91 gtttacaacatccttg-aagttgggtgga 118 |||||||||||||||| |||||||||||| Sbjct: 50980 gtttacaacatccttgcaagttgggtgga 51008
>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1, TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1, TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1, TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8, TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5, TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3, TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2, TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3 of 3) Length = 232650 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aatcttctgaaaatgggaat 47 |||||||||||||||||||| Sbjct: 73286 aatcttctgaaaatgggaat 73305
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aatcttctgaaaatgggaat 47 |||||||||||||||||||| Sbjct: 525609 aatcttctgaaaatgggaat 525628
>gb|AY459577.1| Drosophila simulans DS06238.4-like protein gene, partial cds; and 5' flanking region Length = 755 Score = 40.1 bits (20), Expect = 1.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 41 tgggaatggtatatgtgggcataancacgaaacaa 75 ||||| ||||||||||||||||| || ||||||| Sbjct: 622 tgggattggtatatgtgggcatagccaagaaacaa 656
>emb|AJ635582.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons 1-3, allele wild-type Length = 1627 Score = 40.1 bits (20), Expect = 1.9 Identities = 91/116 (78%) Strand = Plus / Minus Query: 5 tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64 ||||| |||||||| | || ||||||||||||||||| || || || | ||| ||||| Sbjct: 1279 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaacgtgagcatat 1220 Query: 65 ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| || || ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 1219 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 1164
>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence Length = 180951 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aatcttctgaaaatgggaat 47 |||||||||||||||||||| Sbjct: 73235 aatcttctgaaaatgggaat 73254
>emb|CR954296.5| Zebrafish DNA sequence from clone DKEY-114K23 in linkage group 8, complete sequence Length = 72443 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 acatccttgaagttgggtgg 117 |||||||||||||||||||| Sbjct: 70144 acatccttgaagttgggtgg 70125
>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains the HEYL gene for hairy/enhancer-of-split related protein with YRPW-like motif, a novel gene, the NT5C1A gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for hippocalcin like 4, a novel pseudogene, the 5' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E) and six CpG islands, complete sequence Length = 154412 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaat 41 |||||||||||||||||||| Sbjct: 133625 gctgacaatcttctgaaaat 133606
>emb|AJ319713.2|MSA319713 Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1 gene), allele wild-type Length = 648 Score = 40.1 bits (20), Expect = 1.9 Identities = 91/116 (78%) Strand = Plus / Minus Query: 5 tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64 ||||| |||||||| | || ||||||||||||||||| || || || | ||| ||||| Sbjct: 536 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaacgtgagcatat 477 Query: 65 ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120 |||| || || ||| || ||||| || |||||||| |||| ||||||||||| Sbjct: 476 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 421
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 1.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 41 tgggaatggtatatgtgggcataancacgaaacaa 75 ||||| ||||||||||||||||| || ||||||| Sbjct: 62993 tgggattggtatatgtgggcatagccaagaaacaa 63027
>gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, complete sequence Length = 163815 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 gaaaatgggaatggtatatgtggg 59 |||||||||| ||||||||||||| Sbjct: 17775 gaaaatgggagtggtatatgtggg 17798
>gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, complete sequence Length = 115940 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 gaaaatgggaatggtatatgtggg 59 |||||||||| ||||||||||||| Sbjct: 33243 gaaaatgggagtggtatatgtggg 33266
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 40.1 bits (20), Expect = 1.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 41 tgggaatggtatatgtgggcataancacgaaacaa 75 ||||| ||||||||||||||||| || ||||||| Sbjct: 190917 tgggattggtatatgtgggcatagccaagaaacaa 190951
>gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; trypsinogen (try5) and trypsinogen (try6) pseudogenes, complete sequence; trypsinogen (try7) pseudogene, partial sequence; trypsinogen (try8) pseudogene, complete sequence; try9 (try9) and try10 (try10) genes, complete cds; trypsinogen (try11) pseudogene, complete sequence; try12 (try12), try13 (try13), and try14 (try14) genes, complete cds; trypsinogen (try15) pseudogene, complete sequence; and try16 (try16) gene, complete cds Length = 188583 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 aatcttctgaaaatgggaat 47 |||||||||||||||||||| Sbjct: 2264 aatcttctgaaaatgggaat 2283
>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence Length = 131005 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 acatccttgaagttgggtgg 117 |||||||||||||||||||| Sbjct: 81364 acatccttgaagttgggtgg 81345
>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete sequence Length = 148213 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 tttacaacatccttgaagt 110 ||||||||||||||||||| Sbjct: 123767 tttacaacatccttgaagt 123785
>gb|AC148330.2| Mus musculus BAC clone RP24-320F10 from chromosome 8, complete sequence Length = 162341 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 tttacaacatccttgaagt 110 ||||||||||||||||||| Sbjct: 28057 tttacaacatccttgaagt 28075
>ref|NM_001031708.1| Homo sapiens coiled-coil domain containing 25 (CCDC25), transcript variant 1, mRNA Length = 3607 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1188 gctgacaatcttctgaaaa 1170
>ref|NM_018246.1| Homo sapiens coiled-coil domain containing 25 (CCDC25), transcript variant 2, mRNA Length = 3598 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1194 gctgacaatcttctgaaaa 1176
>ref|XM_382408.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02232.1) partial mRNA Length = 2934 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 tttacaacatccttgaagt 110 ||||||||||||||||||| Sbjct: 1583 tttacaacatccttgaagt 1601
>emb|Z75545.1|CEK10D3 Caenorhabditis elegans Cosmid K10D3, complete sequence Length = 30782 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ctgacaatcttctgaaaat 41 ||||||||||||||||||| Sbjct: 14659 ctgacaatcttctgaaaat 14641
>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence Length = 222905 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 tctgaaaatgggaatggtatatg 55 ||||||||||||||| ||||||| Sbjct: 14194 tctgaaaatgggaatagtatatg 14216
>gb|BC065295.1| Homo sapiens coiled-coil domain containing 25, transcript variant 1, mRNA (cDNA clone MGC:70719 IMAGE:6139413), complete cds Length = 3607 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1188 gctgacaatcttctgaaaa 1170
>gb|BC049197.1| Homo sapiens coiled-coil domain containing 25, mRNA (cDNA clone IMAGE:5534448), partial cds Length = 1881 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1200 gctgacaatcttctgaaaa 1182
>emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chromosome X Contains a Sjogren syndrome antigen B (autoantigen La) (SSB) pseudogene, complete sequence Length = 169147 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 aaaattgtgtttacaacat 101 ||||||||||||||||||| Sbjct: 134723 aaaattgtgtttacaacat 134741
>emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chromosome 1 Contains two novel genes, the PFKFB2 gene for 6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 2, the C4BPB gene for complement component 4 binding protein beta, the C4BPA gene for complement component 4 binding protein alpha, a novel pseudogene and a complement component 4 binding protein pseudogene, complete sequence Length = 158939 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 gtgtttacaacatccttga 107 ||||||||||||||||||| Sbjct: 9573 gtgtttacaacatccttga 9591
>emb|AL359850.7| Human DNA sequence from clone RP11-157M8 on chromosome 6, complete sequence Length = 33536 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 cttctgaaaatgggaatgg 49 ||||||||||||||||||| Sbjct: 3537 cttctgaaaatgggaatgg 3555
>gb|AF531184.1| Stangeria eriopus chloroplast trnL gene and trnL-trnF intergenic spacer, partial sequence Length = 1401 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 aaaatgggaatggtatatg 55 ||||||||||||||||||| Sbjct: 657 aaaatgggaatggtatatg 675
>gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence Length = 175380 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 127148 gctgacaatcttctgaaaa 127166
>gb|BC032588.1| Homo sapiens, clone IMAGE:5502227, mRNA Length = 1882 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1183 gctgacaatcttctgaaaa 1165
>emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chromosome 11 Contains the Crk gene for v-crk sarcoma virus CT10 oncogene homolog (avian), the Myo1c gene for myosin IC, the Pps gene for putative phosphatase, the Pitpn gene for phosphatidylinositol transfer protein, a cytochrome c oxidase, subunit VIIc (Cox7c) pseudogene, a novel gene, the 3' end of the gene for a novel protein similar to solute carrier family 43 member 1 Slc43a1 and five CpG islands, complete sequence Length = 157466 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 caatcttctgaaaatggga 45 ||||||||||||||||||| Sbjct: 76720 caatcttctgaaaatggga 76738
>emb|CR859311.1| Pongo pygmaeus mRNA; cDNA DKFZp469M2012 (from clone DKFZp469M2012) Length = 1886 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1215 gctgacaatcttctgaaaa 1197
>emb|CR859224.1| Pongo pygmaeus mRNA; cDNA DKFZp459A2231 (from clone DKFZp459A2231) Length = 3545 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1129 gctgacaatcttctgaaaa 1111
>emb|CR859912.1| Pongo pygmaeus mRNA; cDNA DKFZp469H242 (from clone DKFZp469H242) Length = 3646 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1231 gctgacaatcttctgaaaa 1213
>gb|AY138172.1| Stangeria eriopus tRNA-Leu (trnL) gene, intron sequence; chloroplast gene for chloroplast product Length = 481 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 aaaatgggaatggtatatg 55 ||||||||||||||||||| Sbjct: 256 aaaatgggaatggtatatg 238
>gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, complete sequence Length = 167346 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 140 tgaaataaggattcattgt 158 ||||||||||||||||||| Sbjct: 124481 tgaaataaggattcattgt 124499
>emb|CR617453.1| full-length cDNA clone CS0DA006YL06 of Neuroblastoma of Homo sapiens (human) Length = 1736 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1106 gctgacaatcttctgaaaa 1088
>dbj|AK027900.1| Homo sapiens cDNA FLJ14994 fis, clone Y79AA1002125 Length = 1847 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1198 gctgacaatcttctgaaaa 1180
>dbj|AK001715.1| Homo sapiens cDNA FLJ10853 fis, clone NT2RP4001502 Length = 3598 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 1194 gctgacaatcttctgaaaa 1176
>gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, complete sequence Length = 157324 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gctgacaatcttctgaaaa 40 ||||||||||||||||||| Sbjct: 123643 gctgacaatcttctgaaaa 123661
>ref|XM_683681.1| PREDICTED: Danio rerio similar to transcriptional regulating factor 1 isoform 1 (LOC560284), mRNA Length = 2838 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 gacaatcttctgaaaatgg 43 ||||||||||||||||||| Sbjct: 1981 gacaatcttctgaaaatgg 1999
>emb|CR523971.1| Gallus gallus finished cDNA, clone ChEST65g1 Length = 3600 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 84 aaattgtgtttacaacatc 102 ||||||||||||||||||| Sbjct: 2169 aaattgtgtttacaacatc 2151
>emb|BX000363.21| Zebrafish DNA sequence from clone CH211-10K11 in linkage group 5, complete sequence Length = 174403 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 gacaatcttctgaaaatgg 43 ||||||||||||||||||| Sbjct: 83659 gacaatcttctgaaaatgg 83677
>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence Length = 181971 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 ccttgaagttgggtggaaa 120 ||||||||||||||||||| Sbjct: 161191 ccttgaagttgggtggaaa 161209
>gb|AF407331.1| Stangeria eriopus tRNA-Leu (trnL) gene, partial sequence; and trnL-trnF intergenic spacer, partial sequence; chloroplast gene for chloroplast product Length = 941 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 aaaatgggaatggtatatg 55 ||||||||||||||||||| Sbjct: 198 aaaatgggaatggtatatg 216
>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete sequence Length = 222380 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 tcttctgaaaatgggaatg 48 ||||||||||||||||||| Sbjct: 213624 tcttctgaaaatgggaatg 213606
>emb|BX544871.4| Zebrafish DNA sequence from clone DKEY-244F16 in linkage group 18, complete sequence Length = 203436 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 aaaattgtgtttacaacat 101 ||||||||||||||||||| Sbjct: 75575 aaaattgtgtttacaacat 75593
>emb|BX324138.6| Zebrafish DNA sequence from clone CH211-127F10 in linkage group 18, complete sequence Length = 173169 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 aaaattgtgtttacaacat 101 ||||||||||||||||||| Sbjct: 35135 aaaattgtgtttacaacat 35117
>emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chromosome 12, complete sequence Length = 225685 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 33 tctgaaaatgggaatggtatatg 55 ||||||||||||||| ||||||| Sbjct: 123278 tctgaaaatgggaatagtatatg 123300
>gb|U96726.1|MMU96726 Mus musculus vibrator critical region, phosphatidylinositol transfer protein alpha (Pitpn) and putative phosphoinositide 5-phosphatase type II genes, complete cds, and myosin I beta (MMIb) gene, partial cds, complete sequence Length = 76012 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 caatcttctgaaaatggga 45 ||||||||||||||||||| Sbjct: 52385 caatcttctgaaaatggga 52367
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete sequence Length = 199060 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 tgaagttgggtggaaatgg 123 ||||||||||||||||||| Sbjct: 94864 tgaagttgggtggaaatgg 94882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,112,535 Number of Sequences: 3902068 Number of extensions: 1112535 Number of successful extensions: 83480 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 83258 Number of HSP's gapped (non-prelim): 218 length of query: 158 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 136 effective length of database: 17,147,199,772 effective search space: 2332019168992 effective search space used: 2332019168992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)