ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26j20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_463026.1| Oryza sativa (japonica cultivar-group), OSJNBa0... 168 3e-39
2dbj|AK104547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
3dbj|AK099558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
4dbj|AK098953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
5dbj|AK061735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 3e-39
6gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 155 5e-35
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 5e-35
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 5e-35
9gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome... 155 5e-35
10ref|XM_480217.1| Oryza sativa (japonica cultivar-group), mRNA 139 3e-30
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 139 3e-30
12dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 139 3e-30
13gb|BT016208.1| Zea mays clone Contig41 mRNA sequence 119 3e-24
14gb|AY104572.1| Zea mays PCO087857 mRNA sequence 119 3e-24
15gb|BT017985.1| Zea mays clone EL01N0525F07.c mRNA sequence 96 4e-17
16gb|BT014231.1| Lycopersicon esculentum clone 133430F, mRNA sequence 82 6e-13
17gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, ... 72 5e-10
18gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone CB3A14, ... 66 3e-08
19emb|AJ635583.1| Medicago sativa subsp. falcata mob1 gene for Mob... 56 3e-05
20emb|AJ920380.1| Poa pratensis partial mRNA for Mob1-like protein... 54 1e-04
21ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative... 50 0.002
22gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.002
23gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar N... 50 0.002
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.002
25dbj|AK120220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.002
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.002
27ref|NM_123923.3| Arabidopsis thaliana unknown protein AT5G45550 ... 48 0.008
28gb|AY117158.1| Arabidopsis thaliana unknown protein (At5g45550) ... 48 0.008
29gb|AY045864.1| Arabidopsis thaliana unknown protein (At5g45550) ... 48 0.008
30dbj|AK222194.1| Arabidopsis thaliana mRNA for hypothetical prote... 48 0.008
31emb|BX834019.1|CNS09ZAI Arabidopsis thaliana Full-length cDNA Co... 48 0.008
32emb|BX832788.1|CNS09Z5E Arabidopsis thaliana Full-length cDNA Co... 48 0.008
33gb|AY086730.1| Arabidopsis thaliana clone 27099 mRNA, complete s... 48 0.008
34dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.008
35emb|AM161645.1| Medicago sativa subsp. falcata mRNA for Mob1-lik... 48 0.008
36gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33... 42 0.49
37gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43... 42 0.49
38gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, r... 42 0.49
39emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on ch... 42 0.49
40gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1... 40 1.9
41ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) ... 40 1.9
42gb|AY459577.1| Drosophila simulans DS06238.4-like protein gene, ... 40 1.9
43emb|AJ635582.1| Medicago sativa subsp. falcata mob1 gene for Mob... 40 1.9
44gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, comp... 40 1.9
45emb|CR954296.5| Zebrafish DNA sequence from clone DKEY-114K23 in... 40 1.9
46emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F1... 40 1.9
47emb|AJ319713.2|MSA319713 Medicago sativa subsp. falcata mRNA for... 40 1.9
48gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 40 1.9
49gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, compl... 40 1.9
50gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, comple... 40 1.9
51gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 40 1.9
52gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; tr... 40 1.9
53emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, ... 40 1.9
54gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosom... 38 7.6
55gb|AC148330.2| Mus musculus BAC clone RP24-320F10 from chromosom... 38 7.6
56ref|NM_001031708.1| Homo sapiens coiled-coil domain containing 2... 38 7.6
57ref|NM_018246.1| Homo sapiens coiled-coil domain containing 25 (... 38 7.6
58ref|XM_382408.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 38 7.6
59emb|Z75545.1|CEK10D3 Caenorhabditis elegans Cosmid K10D3, comple... 38 7.6
60gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 38 7.6
61gb|BC065295.1| Homo sapiens coiled-coil domain containing 25, tr... 38 7.6
62gb|BC049197.1| Homo sapiens coiled-coil domain containing 25, mR... 38 7.6
63emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chrom... 38 7.6
64emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chr... 38 7.6
65emb|AL359850.7| Human DNA sequence from clone RP11-157M8 on chro... 38 7.6
66gb|AF531184.1| Stangeria eriopus chloroplast trnL gene and trnL-... 38 7.6
67gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21... 38 7.6
68gb|BC032588.1| Homo sapiens, clone IMAGE:5502227, mRNA 38 7.6
69emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chr... 38 7.6
70emb|CR859311.1| Pongo pygmaeus mRNA; cDNA DKFZp469M2012 (from cl... 38 7.6
71emb|CR859224.1| Pongo pygmaeus mRNA; cDNA DKFZp459A2231 (from cl... 38 7.6
72emb|CR859912.1| Pongo pygmaeus mRNA; cDNA DKFZp469H242 (from clo... 38 7.6
73gb|AY138172.1| Stangeria eriopus tRNA-Leu (trnL) gene, intron se... 38 7.6
74gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, comp... 38 7.6
75emb|CR617453.1| full-length cDNA clone CS0DA006YL06 of Neuroblas... 38 7.6
76dbj|AK027900.1| Homo sapiens cDNA FLJ14994 fis, clone Y79AA1002125 38 7.6
77dbj|AK001715.1| Homo sapiens cDNA FLJ10853 fis, clone NT2RP4001502 38 7.6
78gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, com... 38 7.6
79ref|XM_683681.1| PREDICTED: Danio rerio similar to transcription... 38 7.6
80emb|CR523971.1| Gallus gallus finished cDNA, clone ChEST65g1 38 7.6
81emb|BX000363.21| Zebrafish DNA sequence from clone CH211-10K11 i... 38 7.6
82gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, c... 38 7.6
83gb|AF407331.1| Stangeria eriopus tRNA-Leu (trnL) gene, partial s... 38 7.6
84emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chr... 38 7.6
85emb|BX544871.4| Zebrafish DNA sequence from clone DKEY-244F16 in... 38 7.6
86emb|BX324138.6| Zebrafish DNA sequence from clone CH211-127F10 i... 38 7.6
87emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chr... 38 7.6
88gb|U96726.1|MMU96726 Mus musculus vibrator critical region, phos... 38 7.6
89emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on ch... 38 7.6

>ref|XM_463026.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.2 mRNA
          Length = 1115

 Score =  168 bits (85), Expect = 3e-39
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 710 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 651

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 650 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 591

                                              
Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155
           ||||| ||||||||| ||  ||||||  |||||||
Sbjct: 590 tggtgtgccaagcttttggggaaatatagattcat 556



to top

>dbj|AK104547.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C06, full
           insert sequence
          Length = 1065

 Score =  168 bits (85), Expect = 3e-39
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 650 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 591

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 590 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 531

                                              
Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155
           ||||| ||||||||| ||  ||||||  |||||||
Sbjct: 530 tggtgtgccaagcttttggggaaatatagattcat 496



to top

>dbj|AK099558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034B14, full
           insert sequence
          Length = 1071

 Score =  168 bits (85), Expect = 3e-39
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 667 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 608

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 607 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 548

                                              
Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155
           ||||| ||||||||| ||  ||||||  |||||||
Sbjct: 547 tggtgtgccaagcttttggggaaatatagattcat 513



to top

>dbj|AK098953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M06, full
           insert sequence
          Length = 1039

 Score =  168 bits (85), Expect = 3e-39
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 660 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 601

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 600 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 541

                                              
Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155
           ||||| ||||||||| ||  ||||||  |||||||
Sbjct: 540 tggtgtgccaagcttttggggaaatatagattcat 506



to top

>dbj|AK061735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D08, full
           insert sequence
          Length = 1072

 Score =  168 bits (85), Expect = 3e-39
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 654 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 595

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 594 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 535

                                              
Query: 121 tggtgngccaagcttctgntgaaataaggattcat 155
           ||||| ||||||||| ||  ||||||  |||||||
Sbjct: 534 tggtgtgccaagcttttggggaaatatagattcat 500



to top

>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
              sequence
          Length = 167239

 Score =  155 bits (78), Expect = 5e-35
 Identities = 115/129 (89%)
 Strand = Plus / Plus

                                                                          
Query: 1      aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
              |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 165661 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 165720

                                                                          
Query: 61     ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
              |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 165721 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 165780

                       
Query: 121    tggtgngcc 129
              ||||| |||
Sbjct: 165781 tggtgtgcc 165789



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 5e-35
 Identities = 115/129 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1        aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
                |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 20919617 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 20919558

                                                                            
Query: 61       ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
                |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 20919557 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 20919498

                         
Query: 121      tggtgngcc 129
                ||||| |||
Sbjct: 20919497 tggtgtgcc 20919489



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 5e-35
 Identities = 115/129 (89%)
 Strand = Plus / Minus

                                                                            
Query: 1        aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
                |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 20912646 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 20912587

                                                                            
Query: 61       ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
                |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 20912586 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 20912527

                         
Query: 121      tggtgngcc 129
                ||||| |||
Sbjct: 20912526 tggtgtgcc 20912518



to top

>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0008D12 map MAP_LOC, complete sequence
          Length = 167323

 Score =  155 bits (78), Expect = 5e-35
 Identities = 115/129 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
            |||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 3306 aagatgggcctcctccttgaggctgacaatcttctgaaaatgggagtgatatatgtgggc 3365

                                                                        
Query: 61   ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
            |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 3366 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 3425

                     
Query: 121  tggtgngcc 129
            ||||| |||
Sbjct: 3426 tggtgtgcc 3434



to top

>ref|XM_480217.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 426

 Score =  139 bits (70), Expect = 3e-30
 Identities = 113/129 (87%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
           |||||| ||||| ||||| |||||||||||||||||||||  ||| || |||||||||||
Sbjct: 318 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 259

                                                                       
Query: 61  ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 258 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 199

                    
Query: 121 tggtgngcc 129
           ||||| |||
Sbjct: 198 tggtgtgcc 190



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  139 bits (70), Expect = 3e-30
 Identities = 113/129 (87%)
 Strand = Plus / Minus

                                                                           
Query: 1       aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
               |||||| ||||| ||||| |||||||||||||||||||||  ||| || |||||||||||
Sbjct: 3720875 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 3720816

                                                                           
Query: 61      ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
               |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 3720815 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 3720756

                        
Query: 121     tggtgngcc 129
               ||||| |||
Sbjct: 3720755 tggtgtgcc 3720747



to top

>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ9990_A01
          Length = 101684

 Score =  139 bits (70), Expect = 3e-30
 Identities = 113/129 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     aagatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggc 60
             |||||| ||||| ||||| |||||||||||||||||||||  ||| || |||||||||||
Sbjct: 44372 aagatgggcctcctccttgaggctgacaatcttctgaaaactggagtgatatatgtgggc 44313

                                                                         
Query: 61    ataancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
             |||| |||||||||||  |||||||||||| |||||||| ||||||||||| || || ||
Sbjct: 44312 ataaacacgaaacaagcgcttgaaaattgtctttacaacctccttgaagtttggcgggaa 44253

                      
Query: 121   tggtgngcc 129
             ||||| |||
Sbjct: 44252 tggtgtgcc 44244



to top

>gb|BT016208.1| Zea mays clone Contig41 mRNA sequence
          Length = 1041

 Score =  119 bits (60), Expect = 3e-24
 Identities = 129/154 (83%)
 Strand = Plus / Plus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           ||||| ||||| || || ||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 349 agatgggcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggca 408

                                                                       
Query: 62  taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121
           ||| |||||||||||  |||||| || || || || || ||||||||||| ||||| |||
Sbjct: 409 taaacacgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaat 468

                                             
Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155
           |||| |||||| || ||  |||||| ||||||||
Sbjct: 469 ggtgtgccaagtttttgaggaaatatggattcat 502



to top

>gb|AY104572.1| Zea mays PCO087857 mRNA sequence
          Length = 1332

 Score =  119 bits (60), Expect = 3e-24
 Identities = 129/154 (83%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           ||||| ||||| || || ||||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 752 agatgggcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggca 693

                                                                       
Query: 62  taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121
           ||| |||||||||||  |||||| || || || || || ||||||||||| ||||| |||
Sbjct: 692 taaacacgaaacaagcgcttgaatatcgtcttcactacttccttgaagtttggtgggaat 633

                                             
Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155
           |||| |||||| || ||  |||||| ||||||||
Sbjct: 632 ggtgtgccaagtttttgaggaaatatggattcat 599



to top

>gb|BT017985.1| Zea mays clone EL01N0525F07.c mRNA sequence
          Length = 1171

 Score = 95.6 bits (48), Expect = 4e-17
 Identities = 126/154 (81%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           ||||| ||||| || || ||||| ||||||||||| |||||||| |||||  | ||||||
Sbjct: 826 agatgggcctcctctttaaggctaacaatcttctggaaatgggagtggtaggtatgggca 767

                                                                       
Query: 62  taancacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaat 121
           ||  | ||||||||   |||||| ||||| ||||| || ||||||||||| |||||||||
Sbjct: 766 tagacccgaaacaatcgcttgaatattgtatttactacttccttgaagttcggtggaaat 707

                                             
Query: 122 ggtgngccaagcttctgntgaaataaggattcat 155
           || | |||||| || ||  |||||| ||||||||
Sbjct: 706 ggcgtgccaagtttttgaggaaatatggattcat 673



to top

>gb|BT014231.1| Lycopersicon esculentum clone 133430F, mRNA sequence
          Length = 959

 Score = 81.8 bits (41), Expect = 6e-13
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 8   gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67
           ||||| ||||| || || ||||| ||||||||||||||||| || || || |||||  ||
Sbjct: 677 gcctcctccttaagactcacaattttctgaaaatgggaatgataaatatgtgcatacaca 618

                                                                
Query: 68  cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
           ||||| |    ||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 617 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttgggtggaaa 565



to top

>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence
          Length = 163635

 Score = 71.9 bits (36), Expect = 5e-10
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                          
Query: 8      gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67
              ||||| ||||| || || ||||| |||||||||||||| || || || || |||||  ||
Sbjct: 117911 gcctcctccttaagactcacaattttctgaaaatgggagtgataaatatgtgcatacaca 117970

                                                                      
Query: 68     cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaatgg 123
              ||||| |    ||| |||||||| || ||||||||||||||||||| |||||||||
Sbjct: 117971 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttggatggaaatgg 118026



to top

>gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone CB3A14, complete sequence
          Length = 79178

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                         
Query: 8     gcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataanca 67
             ||||| ||||| || || ||||| |||||||||||||| || || || || |||||  ||
Sbjct: 14564 gcctcctccttaagactcacaattttctgaaaatgggagtgataaatatgtgcatacaca 14505

                                                                  
Query: 68    cgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
             ||||| |    ||| |||||||| || ||||||||||||||||||| ||||||
Sbjct: 14504 cgaaagagacgcttaaaaattgtcttgacaacatccttgaagttggatggaaa 14452



to top

>emb|AJ635583.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons
            1-3, allele mutant
          Length = 1693

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                        
Query: 5    tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64
            ||||| |||||||| |  || ||||||||||||||| | || || || ||||| ||||| 
Sbjct: 1345 tgagcttcttccttcaaactcacaatcttctgaaaacgtgagtgataaatgtgagcatat 1286

                                                                    
Query: 65   ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
             |||| || ||   |||||| ||||| || ||||||||  ||||||||||||||||
Sbjct: 1285 acacggaataatcgcttgaatattgtcttgacaacatctctgaagttgggtggaaa 1230



to top

>emb|AJ920380.1| Poa pratensis partial mRNA for Mob1-like protein (mob1 gene)
          Length = 654

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 1   aagatgagcctcttccttnaggctgacaatcttctgaaaatg 42
           |||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 543 aagatgggcttcttccttgaggctgacaatcttttgaaaatg 502



to top

>ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative F-box protein family
            (OSJNAa0011L09.13), mRNA
          Length = 3459

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 11   tcttccttnaggctgacaatcttctgaaaatg 42
            |||||||| ||||| |||||||||||||||||
Sbjct: 3338 tcttccttgaggctcacaatcttctgaaaatg 3307



to top

>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0011L09, complete sequence
          Length = 121055

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 11    tcttccttnaggctgacaatcttctgaaaatg 42
             |||||||| ||||| |||||||||||||||||
Sbjct: 71456 tcttccttgaggctcacaatcttctgaaaatg 71487



to top

>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
              OSJNBb0058B20 from chromosome 10, complete sequence
          Length = 156232

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 11     tcttccttnaggctgacaatcttctgaaaatg 42
              |||||||| ||||| |||||||||||||||||
Sbjct: 145832 tcttccttgaggctcacaatcttctgaaaatg 145801



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 11       tcttccttnaggctgacaatcttctgaaaatg 42
                |||||||| ||||| |||||||||||||||||
Sbjct: 12775017 tcttccttgaggctcacaatcttctgaaaatg 12775048



to top

>dbj|AK120220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041G09, full
           insert sequence
          Length = 1123

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 11  tcttccttnaggctgacaatcttctgaaaatg 42
           |||||||| ||||| |||||||||||||||||
Sbjct: 766 tcttccttgaggctcacaatcttctgaaaatg 735



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 11       tcttccttnaggctgacaatcttctgaaaatg 42
                |||||||| ||||| |||||||||||||||||
Sbjct: 12782358 tcttccttgaggctcacaatcttctgaaaatg 12782389



to top

>ref|NM_123923.3| Arabidopsis thaliana unknown protein AT5G45550 mRNA, complete cds
          Length = 896

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 603 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 544

              
Query: 62  taa 64
           |||
Sbjct: 543 taa 541



to top

>gb|AY117158.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds
          Length = 679

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 536 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 477

              
Query: 62  taa 64
           |||
Sbjct: 476 taa 474



to top

>gb|AY045864.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds
          Length = 911

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 601 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 542

              
Query: 62  taa 64
           |||
Sbjct: 541 taa 539



to top

>dbj|AK222194.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL24-23-A15
          Length = 555

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 178 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 119

              
Query: 62  taa 64
           |||
Sbjct: 118 taa 116



to top

>emb|BX834019.1|CNS09ZAI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZD04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 812

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 575 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 516

              
Query: 62  taa 64
           |||
Sbjct: 515 taa 513



to top

>emb|BX832788.1|CNS09Z5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZC07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 865

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 571 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 512

              
Query: 62  taa 64
           |||
Sbjct: 511 taa 509



to top

>gb|AY086730.1| Arabidopsis thaliana clone 27099 mRNA, complete sequence
          Length = 883

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 2   agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
           |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 601 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 542

              
Query: 62  taa 64
           |||
Sbjct: 541 taa 539



to top

>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19
          Length = 85020

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 2     agatgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggca 61
             |||||||| ||||| || ||||| || || ||||| ||||| || ||||||||||| |||
Sbjct: 83902 agatgagcttcttcttttaggctaacgattttctggaaatgagagtggtatatgtgagca 83843

                
Query: 62    taa 64
             |||
Sbjct: 83842 taa 83840



to top

>emb|AM161645.1| Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1-B
           gene)
          Length = 880

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 92/116 (79%)
 Strand = Plus / Minus

                                                                       
Query: 5   tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64
           ||||| |||||||| |  || ||||||||||||||||| || || || ||||| ||||| 
Sbjct: 768 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaatgtgagcatat 709

                                                                   
Query: 65  ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
            |||| || ||   ||| || ||||| || ||||||||  |||| |||||||||||
Sbjct: 708 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 653



to top

>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone
             BACR37P12, complete sequence
          Length = 181103

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    aatgggaatggtatatgtggg 59
             |||||||||||||||||||||
Sbjct: 61669 aatgggaatggtatatgtggg 61649



to top

>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete
             sequence
          Length = 265341

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    aatgggaatggtatatgtggg 59
             |||||||||||||||||||||
Sbjct: 96438 aatgggaatggtatatgtggg 96418



to top

>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones
             DS06189, DS04362, and DS07071, complete sequence
          Length = 170056

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aatgggaatggtatatgtggg 59
             |||||||||||||||||||||
Sbjct: 43340 aatgggaatggtatatgtggg 43360



to top

>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete
             sequence
          Length = 156186

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 91    gtttacaacatccttg-aagttgggtgga 118
             |||||||||||||||| ||||||||||||
Sbjct: 50980 gtttacaacatccttgcaagttgggtgga 51008



to top

>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1,
             TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1,
             TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1,
             TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8,
             TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5,
             TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3,
             TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2,
             TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3
             of 3)
          Length = 232650

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    aatcttctgaaaatgggaat 47
             ||||||||||||||||||||
Sbjct: 73286 aatcttctgaaaatgggaat 73305



to top

>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7
          Length = 684973

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     aatcttctgaaaatgggaat 47
              ||||||||||||||||||||
Sbjct: 525609 aatcttctgaaaatgggaat 525628



to top

>gb|AY459577.1| Drosophila simulans DS06238.4-like protein gene, partial cds; and
           5' flanking region
          Length = 755

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 41  tgggaatggtatatgtgggcataancacgaaacaa 75
           ||||| |||||||||||||||||  || |||||||
Sbjct: 622 tgggattggtatatgtgggcatagccaagaaacaa 656



to top

>emb|AJ635582.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons
            1-3, allele wild-type
          Length = 1627

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 91/116 (78%)
 Strand = Plus / Minus

                                                                        
Query: 5    tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64
            ||||| |||||||| |  || ||||||||||||||||| || || || | ||| ||||| 
Sbjct: 1279 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaacgtgagcatat 1220

                                                                    
Query: 65   ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
             |||| || ||   ||| || ||||| || ||||||||  |||| |||||||||||
Sbjct: 1219 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 1164



to top

>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence
          Length = 180951

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    aatcttctgaaaatgggaat 47
             ||||||||||||||||||||
Sbjct: 73235 aatcttctgaaaatgggaat 73254



to top

>emb|CR954296.5| Zebrafish DNA sequence from clone DKEY-114K23 in linkage group 8,
             complete sequence
          Length = 72443

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    acatccttgaagttgggtgg 117
             ||||||||||||||||||||
Sbjct: 70144 acatccttgaagttgggtgg 70125



to top

>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains
              the HEYL gene for hairy/enhancer-of-split related protein
              with YRPW-like motif, a novel gene, the NT5C1A gene for
              cytosolic IA 5'-nucleotidase, the HPCAL4 gene for
              hippocalcin like 4, a novel pseudogene, the 5' end of the
              PPIE gene for peptidylprolyl isomerase E (cyclophilin E)
              and six CpG islands, complete sequence
          Length = 154412

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gctgacaatcttctgaaaat 41
              ||||||||||||||||||||
Sbjct: 133625 gctgacaatcttctgaaaat 133606



to top

>emb|AJ319713.2|MSA319713 Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1
           gene), allele wild-type
          Length = 648

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 91/116 (78%)
 Strand = Plus / Minus

                                                                       
Query: 5   tgagcctcttccttnaggctgacaatcttctgaaaatgggaatggtatatgtgggcataa 64
           ||||| |||||||| |  || ||||||||||||||||| || || || | ||| ||||| 
Sbjct: 536 tgagcttcttccttcaaactcacaatcttctgaaaatgtgagtgataaacgtgagcatat 477

                                                                   
Query: 65  ncacgaaacaagnncttgaaaattgtgtttacaacatccttgaagttgggtggaaa 120
            |||| || ||   ||| || ||||| || ||||||||  |||| |||||||||||
Sbjct: 476 acacggaataatcgcttaaatattgtcttgacaacatctctgaaattgggtggaaa 421



to top

>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR21J17, complete sequence
          Length = 174974

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                
Query: 41    tgggaatggtatatgtgggcataancacgaaacaa 75
             ||||| |||||||||||||||||  || |||||||
Sbjct: 62993 tgggattggtatatgtgggcatagccaagaaacaa 63027



to top

>gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, complete sequence
          Length = 163815

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    gaaaatgggaatggtatatgtggg 59
             |||||||||| |||||||||||||
Sbjct: 17775 gaaaatgggagtggtatatgtggg 17798



to top

>gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, complete sequence
          Length = 115940

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    gaaaatgggaatggtatatgtggg 59
             |||||||||| |||||||||||||
Sbjct: 33243 gaaaatgggagtggtatatgtggg 33266



to top

>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
              sequence
          Length = 236144

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                 
Query: 41     tgggaatggtatatgtgggcataancacgaaacaa 75
              ||||| |||||||||||||||||  || |||||||
Sbjct: 190917 tgggattggtatatgtgggcatagccaagaaacaa 190951



to top

>gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; trypsinogen (try5) and
            trypsinogen (try6) pseudogenes, complete sequence;
            trypsinogen (try7) pseudogene, partial sequence;
            trypsinogen (try8) pseudogene, complete sequence; try9
            (try9) and try10 (try10) genes, complete cds; trypsinogen
            (try11) pseudogene, complete sequence; try12 (try12),
            try13 (try13), and try14 (try14) genes, complete cds;
            trypsinogen (try15) pseudogene, complete sequence; and
            try16 (try16) gene, complete cds
          Length = 188583

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   aatcttctgaaaatgggaat 47
            ||||||||||||||||||||
Sbjct: 2264 aatcttctgaaaatgggaat 2283



to top

>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence
          Length = 131005

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    acatccttgaagttgggtgg 117
             ||||||||||||||||||||
Sbjct: 81364 acatccttgaagttgggtgg 81345



to top

>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete sequence
          Length = 148213

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     tttacaacatccttgaagt 110
              |||||||||||||||||||
Sbjct: 123767 tttacaacatccttgaagt 123785



to top

>gb|AC148330.2| Mus musculus BAC clone RP24-320F10 from chromosome 8, complete sequence
          Length = 162341

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    tttacaacatccttgaagt 110
             |||||||||||||||||||
Sbjct: 28057 tttacaacatccttgaagt 28075



to top

>ref|NM_001031708.1| Homo sapiens coiled-coil domain containing 25 (CCDC25), transcript
            variant 1, mRNA
          Length = 3607

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1188 gctgacaatcttctgaaaa 1170



to top

>ref|NM_018246.1| Homo sapiens coiled-coil domain containing 25 (CCDC25), transcript
            variant 2, mRNA
          Length = 3598

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1194 gctgacaatcttctgaaaa 1176



to top

>ref|XM_382408.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02232.1)
            partial mRNA
          Length = 2934

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 92   tttacaacatccttgaagt 110
            |||||||||||||||||||
Sbjct: 1583 tttacaacatccttgaagt 1601



to top

>emb|Z75545.1|CEK10D3 Caenorhabditis elegans Cosmid K10D3, complete sequence
          Length = 30782

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ctgacaatcttctgaaaat 41
             |||||||||||||||||||
Sbjct: 14659 ctgacaatcttctgaaaat 14641



to top

>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    tctgaaaatgggaatggtatatg 55
             ||||||||||||||| |||||||
Sbjct: 14194 tctgaaaatgggaatagtatatg 14216



to top

>gb|BC065295.1| Homo sapiens coiled-coil domain containing 25, transcript variant 1,
            mRNA (cDNA clone MGC:70719 IMAGE:6139413), complete cds
          Length = 3607

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1188 gctgacaatcttctgaaaa 1170



to top

>gb|BC049197.1| Homo sapiens coiled-coil domain containing 25, mRNA (cDNA clone
            IMAGE:5534448), partial cds
          Length = 1881

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1200 gctgacaatcttctgaaaa 1182



to top

>emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chromosome X Contains a
              Sjogren syndrome antigen B (autoantigen La) (SSB)
              pseudogene, complete sequence
          Length = 169147

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 83     aaaattgtgtttacaacat 101
              |||||||||||||||||||
Sbjct: 134723 aaaattgtgtttacaacat 134741



to top

>emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chromosome 1 Contains
            two novel genes, the PFKFB2 gene for
            6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 2,
            the C4BPB gene for complement component 4 binding protein
            beta, the C4BPA gene for complement component 4 binding
            protein alpha, a novel pseudogene and a complement
            component 4 binding protein pseudogene, complete sequence
          Length = 158939

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 89   gtgtttacaacatccttga 107
            |||||||||||||||||||
Sbjct: 9573 gtgtttacaacatccttga 9591



to top

>emb|AL359850.7| Human DNA sequence from clone RP11-157M8 on chromosome 6, complete
            sequence
          Length = 33536

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 31   cttctgaaaatgggaatgg 49
            |||||||||||||||||||
Sbjct: 3537 cttctgaaaatgggaatgg 3555



to top

>gb|AF531184.1| Stangeria eriopus chloroplast trnL gene and trnL-trnF intergenic
           spacer, partial sequence
          Length = 1401

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  aaaatgggaatggtatatg 55
           |||||||||||||||||||
Sbjct: 657 aaaatgggaatggtatatg 675



to top

>gb|AF235104.5| Homo sapiens chromosome 8 clone GS1-251I7 map p21-p11, complete sequence
          Length = 175380

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     gctgacaatcttctgaaaa 40
              |||||||||||||||||||
Sbjct: 127148 gctgacaatcttctgaaaa 127166



to top

>gb|BC032588.1| Homo sapiens, clone IMAGE:5502227, mRNA
          Length = 1882

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1183 gctgacaatcttctgaaaa 1165



to top

>emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chromosome 11 Contains the
             Crk gene for v-crk sarcoma virus CT10 oncogene homolog
             (avian), the Myo1c gene for myosin IC, the Pps gene for
             putative phosphatase, the Pitpn gene for
             phosphatidylinositol transfer protein, a cytochrome c
             oxidase, subunit VIIc (Cox7c) pseudogene, a novel gene,
             the 3' end of the gene for a novel protein similar to
             solute carrier family 43 member 1 Slc43a1 and five CpG
             islands, complete sequence
          Length = 157466

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    caatcttctgaaaatggga 45
             |||||||||||||||||||
Sbjct: 76720 caatcttctgaaaatggga 76738



to top

>emb|CR859311.1| Pongo pygmaeus mRNA; cDNA DKFZp469M2012 (from clone DKFZp469M2012)
          Length = 1886

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1215 gctgacaatcttctgaaaa 1197



to top

>emb|CR859224.1| Pongo pygmaeus mRNA; cDNA DKFZp459A2231 (from clone DKFZp459A2231)
          Length = 3545

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1129 gctgacaatcttctgaaaa 1111



to top

>emb|CR859912.1| Pongo pygmaeus mRNA; cDNA DKFZp469H242 (from clone DKFZp469H242)
          Length = 3646

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1231 gctgacaatcttctgaaaa 1213



to top

>gb|AY138172.1| Stangeria eriopus tRNA-Leu (trnL) gene, intron sequence;
           chloroplast gene for chloroplast product
          Length = 481

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  aaaatgggaatggtatatg 55
           |||||||||||||||||||
Sbjct: 256 aaaatgggaatggtatatg 238



to top

>gb|AC096640.2| Homo sapiens chromosome 1 clone RP11-332J14, complete sequence
          Length = 167346

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 140    tgaaataaggattcattgt 158
              |||||||||||||||||||
Sbjct: 124481 tgaaataaggattcattgt 124499



to top

>emb|CR617453.1| full-length cDNA clone CS0DA006YL06 of Neuroblastoma of Homo sapiens
            (human)
          Length = 1736

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1106 gctgacaatcttctgaaaa 1088



to top

>dbj|AK027900.1| Homo sapiens cDNA FLJ14994 fis, clone Y79AA1002125
          Length = 1847

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1198 gctgacaatcttctgaaaa 1180



to top

>dbj|AK001715.1| Homo sapiens cDNA FLJ10853 fis, clone NT2RP4001502
          Length = 3598

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   gctgacaatcttctgaaaa 40
            |||||||||||||||||||
Sbjct: 1194 gctgacaatcttctgaaaa 1176



to top

>gb|AC013643.10| Homo sapiens chromosome 8, clone RP11-16P20, complete sequence
          Length = 157324

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     gctgacaatcttctgaaaa 40
              |||||||||||||||||||
Sbjct: 123643 gctgacaatcttctgaaaa 123661



to top

>ref|XM_683681.1| PREDICTED: Danio rerio similar to transcriptional regulating factor 1
            isoform 1 (LOC560284), mRNA
          Length = 2838

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 25   gacaatcttctgaaaatgg 43
            |||||||||||||||||||
Sbjct: 1981 gacaatcttctgaaaatgg 1999



to top

>emb|CR523971.1| Gallus gallus finished cDNA, clone ChEST65g1
          Length = 3600

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 84   aaattgtgtttacaacatc 102
            |||||||||||||||||||
Sbjct: 2169 aaattgtgtttacaacatc 2151



to top

>emb|BX000363.21| Zebrafish DNA sequence from clone CH211-10K11 in linkage group 5,
             complete sequence
          Length = 174403

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    gacaatcttctgaaaatgg 43
             |||||||||||||||||||
Sbjct: 83659 gacaatcttctgaaaatgg 83677



to top

>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence
          Length = 181971

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 102    ccttgaagttgggtggaaa 120
              |||||||||||||||||||
Sbjct: 161191 ccttgaagttgggtggaaa 161209



to top

>gb|AF407331.1| Stangeria eriopus tRNA-Leu (trnL) gene, partial sequence; and
           trnL-trnF intergenic spacer, partial sequence;
           chloroplast gene for chloroplast product
          Length = 941

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 37  aaaatgggaatggtatatg 55
           |||||||||||||||||||
Sbjct: 198 aaaatgggaatggtatatg 216



to top

>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete
              sequence
          Length = 222380

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     tcttctgaaaatgggaatg 48
              |||||||||||||||||||
Sbjct: 213624 tcttctgaaaatgggaatg 213606



to top

>emb|BX544871.4| Zebrafish DNA sequence from clone DKEY-244F16 in linkage group 18,
             complete sequence
          Length = 203436

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 83    aaaattgtgtttacaacat 101
             |||||||||||||||||||
Sbjct: 75575 aaaattgtgtttacaacat 75593



to top

>emb|BX324138.6| Zebrafish DNA sequence from clone CH211-127F10 in linkage group 18,
             complete sequence
          Length = 173169

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    aaaattgtgtttacaacat 101
             |||||||||||||||||||
Sbjct: 35135 aaaattgtgtttacaacat 35117



to top

>emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chromosome 12, complete
              sequence
          Length = 225685

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     tctgaaaatgggaatggtatatg 55
              ||||||||||||||| |||||||
Sbjct: 123278 tctgaaaatgggaatagtatatg 123300



to top

>gb|U96726.1|MMU96726 Mus musculus vibrator critical region, phosphatidylinositol transfer
             protein alpha (Pitpn) and putative phosphoinositide
             5-phosphatase type II genes, complete cds, and myosin I
             beta (MMIb) gene, partial cds, complete sequence
          Length = 76012

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    caatcttctgaaaatggga 45
             |||||||||||||||||||
Sbjct: 52385 caatcttctgaaaatggga 52367



to top

>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete
             sequence
          Length = 199060

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   tgaagttgggtggaaatgg 123
             |||||||||||||||||||
Sbjct: 94864 tgaagttgggtggaaatgg 94882


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,112,535
Number of Sequences: 3902068
Number of extensions: 1112535
Number of successful extensions: 83480
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 83258
Number of HSP's gapped (non-prelim): 218
length of query: 158
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 136
effective length of database: 17,147,199,772
effective search space: 2332019168992
effective search space used: 2332019168992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top