ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd26h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ222774.1|HVJ222774 Hordeum vulgare mRNA for putative thiol... 678 0.0
2ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
3ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 5e-04
4gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
7dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
8dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
9dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
10dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
12dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.031
14emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease 48 0.031
15dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
16dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene... 48 0.031
17ref|XM_759922.1| Theileria parva strain Muguga hypothetical prot... 46 0.12
18gb|AY110563.1| Zea mays CL897_1 mRNA sequence 46 0.12
19emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine pro... 44 0.48
20gb|AC011334.5| Homo sapiens chromosome 5 clone CTC-235N17, compl... 44 0.48
21gb|AC011354.4|AC011354 Homo sapiens chromosome 5 clone CTC-354F1... 44 0.48
22emb|BX649289.11| Zebrafish DNA sequence from clone DKEY-231H5 in... 44 0.48
23gb|U48863.1|PCU48863 Petroselinum crispum pathogenesis-related p... 44 0.48
24ref|NM_183860.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
25gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, com... 42 1.9
26gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 42 1.9
27gb|AY380826.1| Lymphocystis disease virus - isolate China, compl... 42 1.9
28gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, comple... 42 1.9
29gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6... 42 1.9
30gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 42 1.9
31emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on ch... 42 1.9
32gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, co... 42 1.9
33gb|AF267914.1| Saccharomyces bayanus tRNA-Thr gene, partial sequ... 42 1.9
34gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.9
35gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome... 42 1.9
36gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, comp... 42 1.9
37gb|AE006470.1| Chlorobium tepidum TLS, complete genome 42 1.9
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
39gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, r... 42 1.9
40emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in ... 42 1.9
41gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, c... 42 1.9
42gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, ... 42 1.9
43dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
44dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
45emb|CT572986.11| Mouse DNA sequence from clone RP23-32M23 on chr... 42 1.9
46gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 42 1.9
47emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.9
48gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 ... 42 1.9
49emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in ... 42 1.9
50emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in... 42 1.9
51emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chro... 42 1.9
52gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.5
53gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park ... 40 7.5
54ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa816... 40 7.5
55ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 7.5
56ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
57ref|NM_184003.1| Oryza sativa (japonica cultivar-group), predic... 40 7.5
58ref|NM_183997.1| Oryza sativa (japonica cultivar-group), predic... 40 7.5
59gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete... 40 7.5
60gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete... 40 7.5
61gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 40 7.5
62gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, co... 40 7.5
63gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion,... 40 7.5
64gb|AC123866.4| Mus musculus BAC clone RP23-124I3 from chromosome... 40 7.5
65gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome... 40 7.5
66gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence 40 7.5
67emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitoc... 40 7.5
68emb|AL607082.9| Human DNA sequence from clone RP11-166O7 on chro... 40 7.5
69emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chro... 40 7.5
70gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1... 40 7.5
71emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on ch... 40 7.5
72emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in... 40 7.5
73emb|V00695.1|MISC14 Yeast mitochondrial tRNA genes (several, map... 40 7.5
74emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 7.5
75emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in li... 40 7.5
76emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chr... 40 7.5
77emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 40 7.5
78gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Ca... 40 7.5
79emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 i... 40 7.5
80gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.5
81emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in... 40 7.5
82gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, comp... 40 7.5
83gb|L36887.1|YSCMTCG03 Saccharomyces cerevisiae mitochondrion tra... 40 7.5
84gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, comp... 40 7.5
85gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 40 7.5
86ref|XM_680321.1| PREDICTED: Danio rerio similar to Fras1 related... 40 7.5
87gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.5
88dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
89gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Ca... 40 7.5
90gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, c... 40 7.5
91gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complet... 40 7.5
92dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
93gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, comple... 40 7.5
94gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.5
95gb|AC093332.10| Homo sapiens chromosome 18, clone RP11-802O5, co... 40 7.5
96dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
97dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
98dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
99dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
100emb|BX649477.10| Zebrafish DNA sequence from clone CH211-265K4 i... 40 7.5
101emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 i... 40 7.5
102dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, co... 40 7.5
103dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
104dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
105dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
106dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
107emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in... 40 7.5
108emb|CR356237.9| Zebrafish DNA sequence from clone CH211-219P7 in... 40 7.5
109emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 i... 40 7.5
110gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 40 7.5
111gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, comp... 40 7.5
112gb|AC154012.5| Mus musculus 6 BAC RP24-496L23 (Roswell Park Canc... 40 7.5
113emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chr... 40 7.5
114emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, c... 40 7.5
115emb|X06047.1|MISCTRNA Yeast mitochondrial tRNA genes for tRNA-Al... 40 7.5
116gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 7.5
117gb|M77350.1|MUSMHKA1A Mouse hair keratin A1 (MHKA1) gene, comple... 40 7.5
118emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on ch... 40 7.5 
>emb|AJ222774.1|HVJ222774 Hordeum vulgare mRNA for putative thiol protease, clone L8
          Length = 382

 Score =  678 bits (342), Expect = 0.0
 Identities = 349/350 (99%), Gaps = 1/350 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aattatttaatatttatatataaaggtatgcacggagtcacacagagnatagatgatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 349 aattatttaatatttatatataaaggtatgcacggagtcacacagag-atagatgatgat 291

                                                                       
Query: 61  ggaggtgccatcatatgatagggtaaaccgggagcttggcaaggccgcacaagcccaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ggaggtgccatcatatgatagggtaaaccgggagcttggcaaggccgcacaagcccaagg 231

                                                                       
Query: 121 gcggcgagtccctaaggagatagatgaagcctttgtcaccccacttggcagtccacgagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gcggcgagtccctaaggagatagatgaagcctttgtcaccccacttggcagtccacgagt 171

                                                                       
Query: 181 tcttaccgatccagtacttggtcccgtcaggcttggtcccgtacccgacgagggccatcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcttaccgatccagtacttggtcccgtcaggcttggtcccgtacccgacgagggccatcg 111

                                                                       
Query: 241 catggttctgcgcagtcttgcacgcccctttgatgtagacgccggacctggagcaaccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 catggttctgcgcagtcttgcacgcccctttgatgtagacgccggacctggagcaaccgg 51

                                                             
Query: 301 cgttgtacacgccgccgatgtagtgctggaagcaggggtcactgtagtcg 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  cgttgtacacgccgccgatgtagtgctggaagcaggggtcactgtagtcg 1
to top
>ref|XM_450799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1419

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 483 gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
           ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 758 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 720
to top
>ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.55 mRNA
          Length = 1882

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 483 gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
           ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 766 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 728
to top
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0013C12 map near S6115, complete sequence
          Length = 123718

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 483   gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
             ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 34567 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 34529
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 483      gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
                ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 12867231 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 12867193



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 173     ccacgagttcttaccgatccagtacttggtcccgtc 208
               ||||||||||||  |||||||||||||||| |||||
Sbjct: 8298341 ccacgagttcttgacgatccagtacttggtgccgtc 8298376
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 483      gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
                ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 12844937 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 12844975



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 173      ccacgagttcttaccgatccagtacttggt 202
                ||||||||||||| ||||||||||||||||
Sbjct: 22126327 ccacgagttcttaacgatccagtacttggt 22126356



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 173      ccacgagttcttaccgatccagta 196
                ||||||||||||| ||||||||||
Sbjct: 22136831 ccacgagttcttaacgatccagta 22136854
to top
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0027G10
          Length = 184759

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 483    gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
              ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 152714 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 152752
to top
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0505H05
          Length = 152845

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 483  gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
            ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 6921 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 6959
to top
>dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N05, full
           insert sequence
          Length = 1419

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 483 gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
           ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 758 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 720
to top
>dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041D01, full
           insert sequence
          Length = 1882

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 483 gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
           ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 766 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 728
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 483      gtgtaggggtaggccgcctccgtggtgatgccaccgttc 521
                ||||| |||||| ||||||||||||||| ||||||||||
Sbjct: 12947438 gtgtacgggtagtccgcctccgtggtgaggccaccgttc 12947400



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 173     ccacgagttcttaccgatccagtacttggtcccgtc 208
               ||||||||||||  |||||||||||||||| |||||
Sbjct: 8369104 ccacgagttcttgacgatccagtacttggtgccgtc 8369139
to top
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042B15
          Length = 157981

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 173   ccacgagttcttaccgatccagtacttggt 202
             ||||||||||||| ||||||||||||||||
Sbjct: 47820 ccacgagttcttaacgatccagtacttggt 47849



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   ccacgagttcttaccgatccagta 196
             ||||||||||||| ||||||||||
Sbjct: 58324 ccacgagttcttaacgatccagta 58347
to top
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026D03 map near S2137, complete sequence
          Length = 115141

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 173   ccacgagttcttaccgatccagtacttggtcccgtc 208
             ||||||||||||  |||||||||||||||| |||||
Sbjct: 34059 ccacgagttcttgacgatccagtacttggtgccgtc 34024
to top
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease
          Length = 1440

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 1071 ccacgagttcttgacgatccagtacttggtgccgtc 1036
to top
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full
            insert sequence
          Length = 1511

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 1077 ccacgagttcttgacgatccagtacttggtgccgtc 1042
to top
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine
            endopeptidase, complete cds
          Length = 3836

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            ||||||||||||  |||||||||||||||| |||||
Sbjct: 2593 ccacgagttcttgacgatccagtacttggtgccgtc 2558
to top
>ref|XM_759922.1| Theileria parva strain Muguga hypothetical protein (TP02_0449)
            partial mRNA
          Length = 2578

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 1    aattatttaatatttatatataa 23
            |||||||||||||||||||||||
Sbjct: 2546 aattatttaatatttatatataa 2568
to top
>gb|AY110563.1| Zea mays CL897_1 mRNA sequence
          Length = 794

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 478 tgccggtgtaggggtaggccgcctccgtggtgatgccaccgtt 520
           |||| ||||| |||||| | ||||||||||||||||| |||||
Sbjct: 258 tgcccgtgtacgggtagtcggcctccgtggtgatgccgccgtt 216
to top
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
          Length = 5593

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 363  acgggctgctgcgccacggcctccttgagccccgcctcgttg 404
            |||||||| |||||||||||| || | ||| |||||||||||
Sbjct: 4650 acgggctggtgcgccacggccgccatcagcgccgcctcgttg 4609



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            ||||||||||||   ||||||||||||||| |||||
Sbjct: 4810 ccacgagttcttcatgatccagtacttggtgccgtc 4775
to top
>gb|AC011334.5| Homo sapiens chromosome 5 clone CTC-235N17, complete sequence
          Length = 134413

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2     attatttaatatttatatataa 23
             ||||||||||||||||||||||
Sbjct: 10601 attatttaatatttatatataa 10580
to top
>gb|AC011354.4|AC011354 Homo sapiens chromosome 5 clone CTC-354F19, complete sequence
          Length = 133042

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2     attatttaatatttatatataa 23
             ||||||||||||||||||||||
Sbjct: 83622 attatttaatatttatatataa 83601
to top
>emb|BX649289.11| Zebrafish DNA sequence from clone DKEY-231H5 in linkage group 20,
              complete sequence
          Length = 124708

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2      attatttaatatttatatataa 23
              ||||||||||||||||||||||
Sbjct: 109111 attatttaatatttatatataa 109132
to top
>gb|U48863.1|PCU48863 Petroselinum crispum pathogenesis-related protein (pr1-2) gene,
           promoter region and most of exon 1
          Length = 1312

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 1   aattatttaatatttatatata 22
           ||||||||||||||||||||||
Sbjct: 244 aattatttaatatttatatata 265
to top
>ref|NM_183860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 172  tccacgagttcttaccgatccagtacttg 200
            |||||||||||||  ||||||||||||||
Sbjct: 1000 tccacgagttcttggcgatccagtacttg 972
to top
>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      tatttaatatttatatataaa 24
              |||||||||||||||||||||
Sbjct: 170616 tatttaatatttatatataaa 170596
to top
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      tatttaatatttatatataaa 24
              |||||||||||||||||||||
Sbjct: 195643 tatttaatatttatatataaa 195663
to top
>gb|AY380826.1| Lymphocystis disease virus - isolate China, complete genome
          Length = 186250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     aattatttaatatttatatataaag 25
             |||| ||||||||||||||||||||
Sbjct: 67750 aattttttaatatttatatataaag 67726
to top
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence
          Length = 219825

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      attatttaatatttatatata 22
              |||||||||||||||||||||
Sbjct: 216486 attatttaatatttatatata 216466
to top
>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the
          complete sequence
          Length = 250823

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  aattatttaatatttatatataaag 25
          ||||||| |||||||||||||||||
Sbjct: 24 aattattaaatatttatatataaag 48
to top
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      aattatttaatatttatatataaag 25
              ||||||| |||||||||||||||||
Sbjct: 249993 aattattaaatatttatatataaag 250017
to top
>emb|AL357293.16| Human DNA sequence from clone RP11-418K10 on chromosome 9, complete
             sequence
          Length = 104596

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 90310 tatttaatatttatatataaa 90290
to top
>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence
          Length = 174164

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 15028 tatttaatatttatatataaa 15008
to top
>gb|AF267914.1| Saccharomyces bayanus tRNA-Thr gene, partial sequence; and tRNA-Cys,
            tRNA-His, tRNA-Leu, tRNA-Gln, tRNA-Lys, tRNA-Arg,
            tRNA-Gly, tRNA-Asp, tRNA-Ser, tRNA-Arg, tRNA-Ala,
            tRNA-Ile, tRNA-Tyr, tRNA-Asn, and tRNA-Met genes,
            complete sequence; mitochondrial genes for mitochondrial
            products
          Length = 5219

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 9    aatatttatatataaaggtat 29
            |||||||||||||||||||||
Sbjct: 1635 aatatttatatataaaggtat 1655
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 463     ggcaattgccggccttgccgg 483
               |||||||||||||||||||||
Sbjct: 3540986 ggcaattgccggccttgccgg 3541006



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       ttatttaatatttatatata 22
               ||||||||||||||||||||
Sbjct: 1351464 ttatttaatatttatatata 1351483
to top
>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete
            sequence
          Length = 176432

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 13   tttatatataaaggtatgcac 33
            |||||||||||||||||||||
Sbjct: 4520 tttatatataaaggtatgcac 4500
to top
>gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, complete sequence
          Length = 167982

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 14155 tatttaatatttatatataaa 14135
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 504   gtggtgatgccaccgttcatg 524
             |||||||||||||||||||||
Sbjct: 81182 gtggtgatgccaccgttcatg 81162
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 172      tccacgagttcttaccgatccagtacttg 200
                |||||||||||||  ||||||||||||||
Sbjct: 12735937 tccacgagttcttggcgatccagtacttg 12735909



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 3        ttatttaatatttatatata 22
                ||||||||||||||||||||
Sbjct: 21029183 ttatttaatatttatatata 21029164



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 172      tccacgagttcttaccgatccagtactt 199
                |||||||||||||  |||||||||||||
Sbjct: 13843215 tccacgagttcttggcgatccagtactt 13843188



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 172      tccacgagttcttaccgatccagtactt 199
                |||||||||||||  |||||||||||||
Sbjct: 13821084 tccacgagttcttggcgatccagtactt 13821111



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 173     ccacgagttcttaccgatccagtacttg 200
               ||||||||||||  ||||||||||||||
Sbjct: 6400961 ccacgagttcttggcgatccagtacttg 6400934
to top
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone
             BACR17H16, complete sequence
          Length = 182080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 57849 tatttaatatttatatataaa 57829
to top
>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3,
            complete sequence
          Length = 192501

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 3    ttatttaatatttatatataa 23
            |||||||||||||||||||||
Sbjct: 9131 ttatttaatatttatatataa 9111
to top
>gb|AC090764.35| Homo sapiens chromosome 15, clone RP11-289D12, complete sequence
          Length = 137300

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      tatttaatatttatatataaa 24
              |||||||||||||||||||||
Sbjct: 129336 tatttaatatttatatataaa 129316
to top
>gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, complete sequence
          Length = 222726

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      tatttaatatttatatataaa 24
              |||||||||||||||||||||
Sbjct: 108470 tatttaatatttatatataaa 108450
to top
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489E06
          Length = 140229

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 172   tccacgagttcttaccgatccagtacttg 200
             |||||||||||||  ||||||||||||||
Sbjct: 16336 tccacgagttcttggcgatccagtacttg 16308
to top
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0554D10
          Length = 158723

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 172    tccacgagttcttaccgatccagtacttg 200
              |||||||||||||  ||||||||||||||
Sbjct: 102966 tccacgagttcttggcgatccagtacttg 102938
to top
>emb|CT572986.11| Mouse DNA sequence from clone RP23-32M23 on chromosome 13, complete
             sequence
          Length = 76596

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    tttatatataaaggtatgcac 33
             |||||||||||||||||||||
Sbjct: 37493 tttatatataaaggtatgcac 37473
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 299     ggcgttgtacacgccgccgatgtag 323
               ||||||||||||||||| |||||||
Sbjct: 3025170 ggcgttgtacacgccgcggatgtag 3025194
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 388    tgagccccgcctcgttgccgg 408
              |||||||||||||||||||||
Sbjct: 353549 tgagccccgcctcgttgccgg 353569
to top
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete
              sequence
          Length = 315109

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      tatttaatatttatatataaa 24
              |||||||||||||||||||||
Sbjct: 122273 tatttaatatttatatataaa 122253
to top
>emb|BX000481.5| Zebrafish DNA sequence from clone CH211-13A4 in linkage group 5,
             complete sequence
          Length = 163926

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 30008 tatttaatatttatatataaa 30028
to top
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5,
             complete sequence
          Length = 143013

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     tatttaatatttatatataaa 24
             |||||||||||||||||||||
Sbjct: 31265 tatttaatatttatatataaa 31285
to top
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete
              sequence
          Length = 208265

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 2      attatttaatatttatatata 22
              |||||||||||||||||||||
Sbjct: 204926 attatttaatatttatatata 204906
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 440     caccgcgaccggcttgcccg 459
               ||||||||||||||||||||
Sbjct: 2331823 caccgcgaccggcttgcccg 2331804
to top
>gb|AC154009.1| Mus musculus 6 NOVECTOR RP24-544G1 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 140214

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 35258 ttatttaatatttatatata 35277



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 35235 ttatttaatatttatatata 35254
to top
>ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Ozsa8161 predicted mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 173 ccacgagttcttaccgatccagtacttg 200
           ||||||||||||  ||||||||||||||
Sbjct: 996 ccacgagttcttggcgatccagtacttg 969
to top
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003
to top
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003
to top
>ref|NM_184003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 172 tccacgagttcttaccgatccagtactt 199
           |||||||||||||  |||||||||||||
Sbjct: 982 tccacgagttcttggcgatccagtactt 955
to top
>ref|NM_183997.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 172 tccacgagttcttaccgatccagtactt 199
           |||||||||||||  |||||||||||||
Sbjct: 982 tccacgagttcttggcgatccagtactt 955
to top
>gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete sequence
          Length = 179325

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 75220 ttatttaatatttatatata 75201
to top
>gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete sequence
          Length = 152443

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ttatttaatatttatatata 22
            ||||||||||||||||||||
Sbjct: 7399 ttatttaatatttatatata 7380
to top
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aattatttaatatttatatataaa 24
             |||| |||||||||||||||||||
Sbjct: 72185 aattgtttaatatttatatataaa 72162
to top
>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence
          Length = 179510

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     tgatgatggaggtgccatca 73
              ||||||||||||||||||||
Sbjct: 132026 tgatgatggaggtgccatca 132007
to top
>gb|AY962591.1| Candida metapsilosis strain MCO448 mitochondrion, complete genome
          Length = 24152

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atttaatatttatatataaa 24
             ||||||||||||||||||||
Sbjct: 17358 atttaatatttatatataaa 17377
to top
>gb|AC123866.4| Mus musculus BAC clone RP23-124I3 from chromosome 8, complete sequence
          Length = 217446

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 69500 tatttaatatttatatataa 69519
to top
>gb|AC125330.5| Mus musculus BAC clone RP23-217A6 from chromosome 6, complete sequence
          Length = 182355

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 146734 ttatttaatatttatatata 146753



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 146711 ttatttaatatttatatata 146730
to top
>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence
          Length = 177066

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tatttaatatttatatataa 23
              ||||||||||||||||||||
Sbjct: 114683 tatttaatatttatatataa 114702
to top
>emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitochondrial genome
          Length = 85779

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 69986 ttatttaatatttatatata 69967
to top
>emb|AL607082.9| Human DNA sequence from clone RP11-166O7 on chromosome 10, complete
             sequence
          Length = 75633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aattatttaatatttatata 20
             ||||||||||||||||||||
Sbjct: 16134 aattatttaatatttatata 16153
to top
>emb|AL590613.6| Human DNA sequence from clone RP11-164G6 on chromosome 6 Contains
            part of the LAMA2 gene for laminin, alpha 2 (merosin,
            congenital muscular dystrophy) (LAMM), complete sequence
          Length = 91827

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    aattatttaatatttatata 20
            ||||||||||||||||||||
Sbjct: 4656 aattatttaatatttatata 4637
to top
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete
              sequence
          Length = 250743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 241955 ttatttaatatttatatata 241936



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 241849 ttatttaatatttatatata 241830



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 138986 ttatttaatatttatatata 139005
to top
>emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on chromosome 9 Contains the 5'
              end of the SHB gene for SHB (Src homology 2 domain
              containing) adaptor protein B and two CpG islands, complete
              sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      atttaatatttatatataaa 24
              ||||||||||||||||||||
Sbjct: 144618 atttaatatttatatataaa 144637
to top
>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
              complete sequence
          Length = 110120

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aattatttaatatttatatataaa 24
              |||| |||||||||||||||||||
Sbjct: 103835 aattctttaatatttatatataaa 103812
to top
>emb|V00695.1|MISC14 Yeast mitochondrial tRNA genes (several, map positions 3.5 to 8.6)
            encoding tRNAs for Lys, Arg, Gly, Asp, Ser, Arg, and Ala
          Length = 3630

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ttatttaatatttatatata 22
            ||||||||||||||||||||
Sbjct: 3593 ttatttaatatttatatata 3574
to top
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       aattatttaatatttatata 20
               ||||||||||||||||||||
Sbjct: 1374034 aattatttaatatttatata 1374053
to top
>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains
              part of a novel gene similar to ATP8B1 (ATPase, Class I,
              type 8B, member 1), part of a novel gene similar to MCF2
              (MCF.2 cell line derived transforming sequence) and two CpG
              islands, complete sequence
          Length = 174521

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 105137 ttatttaatatttatatata 105118
to top
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the
              Slc17a1 gene for solute carrier family 17 (vesicular
              glutamate transporter) member 1, two genes for novel solute
              carrier family 17 (Slc17) members, two novel genes, the
              gene for a novel C3HC4 type zinc finger (ring finger)
              protein, the gene for an H2a, an H2b, two genes for H3 and
              two genes for H4 histone family members, a H2a histone
              family pseudogene, the H1f1 and  H1f2 genes for H1 histone
              family members 1 and 2, the H3f2 gene for H3 histone
              family, member 2 (H3.2), a novel pseudogene, the Hfe gene
              for hemochromatosis protein (Mr2) and two CpG islands,
              complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      atttaatatttatatataaa 24
              ||||||||||||||||||||
Sbjct: 120803 atttaatatttatatataaa 120822
to top
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3
          Length = 349751

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      aattatttaatatttatatataaa 24
              ||||||||||||| ||||||||||
Sbjct: 311259 aattatttaatatatatatataaa 311282
to top
>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 126503

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 16856 tatttaatatttatatataa 16837
to top
>emb|AL928834.15| Zebrafish DNA sequence from clone CH211-51E12 in linkage group 4 Contains
              the gene for a novel protein (zgc:56546), the gene for a
              novel protein similar to the Tctex-1 family, the gene for a
              novel protein similar to vertebrate tubby like protein 4
              (TULP4), the gene for a novel protein similar to vertebrate
              mitochondrial ribosomal protein S10 (MRPS10), the 3' end of
              a novel gene, two novel genes and three CpG islands,
              complete sequence
          Length = 189764

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tatttaatatttatatataa 23
              ||||||||||||||||||||
Sbjct: 113619 tatttaatatttatatataa 113600
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gccgcacaagcccaagggcg 123
               ||||||||||||||||||||
Sbjct: 2172568 gccgcacaagcccaagggcg 2172587
to top
>emb|BX511181.13| Zebrafish DNA sequence from clone DKEY-100H5 in linkage group 24,
             complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atttaatatttatatataaa 24
             ||||||||||||||||||||
Sbjct: 68451 atttaatatttatatataaa 68470
to top
>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence
          Length = 197191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      atttaatatttatatataaa 24
              ||||||||||||||||||||
Sbjct: 154932 atttaatatttatatataaa 154951
to top
>gb|L36887.1|YSCMTCG03 Saccharomyces cerevisiae mitochondrion transfer RNA- Leu, Gln, Lys,
            Arg, Gly, Asp, Ser2, Arg2, Ala, Ile, Tyr, Asn genes
          Length = 6340

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ttatttaatatttatatata 22
            ||||||||||||||||||||
Sbjct: 4459 ttatttaatatttatatata 4440
to top
>gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, complete sequence
          Length = 196849

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ttaatatttatatataaagg 26
              ||||||||||||||||||||
Sbjct: 184714 ttaatatttatatataaagg 184695
to top
>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ttaatatttatatataaagg 26
              ||||||||||||||||||||
Sbjct: 123843 ttaatatttatatataaagg 123824
to top
>ref|XM_680321.1| PREDICTED: Danio rerio similar to Fras1 related extracellular
           matrix protein 1 (LOC557284), mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 tgtagtgctggaagcagggg 338
           ||||||||||||||||||||
Sbjct: 84  tgtagtgctggaagcagggg 103
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 440     caccgcgaccggcttgcccg 459
               ||||||||||||||||||||
Sbjct: 2485574 caccgcgaccggcttgcccg 2485555
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 173      ccacgagttcttaccgatccagtacttggtcccgtc 208
                |||||||||| |  |||||||||||||||| |||||
Sbjct: 27868936 ccacgagttcctgacgatccagtacttggtgccgtc 27868901
to top
>gb|AC024153.22| Homo sapiens 12 BAC RP13-359K18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 178905

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 95516 tatttaatatttatatataa 95535
to top
>gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, complete sequence
          Length = 185563

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   tgtagctcctgagcctcacc 443
             ||||||||||||||||||||
Sbjct: 58605 tgtagctcctgagcctcacc 58624
to top
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence
          Length = 155011

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 19800 tatttaatatttatatataa 19781
to top
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1014_G12
          Length = 158830

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 92385 ttatttaatatttatatata 92366
to top
>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence
          Length = 166305

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aattatttaatatttatatataaa 24
              |||||||||| |||||||||||||
Sbjct: 105998 aattatttaaaatttatatataaa 105975
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 361     cgacgggctgctgcgccacg 380
               ||||||||||||||||||||
Sbjct: 2415332 cgacgggctgctgcgccacg 2415351
to top
>gb|AC093332.10| Homo sapiens chromosome 18, clone RP11-802O5, complete sequence
          Length = 112270

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 424  tgtagctcctgagcctcacc 443
            ||||||||||||||||||||
Sbjct: 1021 tgtagctcctgagcctcacc 1002
to top
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665D10
          Length = 134967

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 173   ccacgagttcttaccgatccagtacttg 200
             ||||||||||||  ||||||||||||||
Sbjct: 23356 ccacgagttcttggcgatccagtacttg 23329
to top
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 173    ccacgagttcttaccgatccagtacttg 200
              ||||||||||||  ||||||||||||||
Sbjct: 172027 ccacgagttcttggcgatccagtacttg 172000
to top
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1051E10
          Length = 207782

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 172  tccacgagttcttaccgatccagtactt 199
            |||||||||||||  |||||||||||||
Sbjct: 3517 tccacgagttcttggcgatccagtactt 3490
to top
>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 172   tccacgagttcttaccgatccagtactt 199
             |||||||||||||  |||||||||||||
Sbjct: 80618 tccacgagttcttggcgatccagtactt 80591



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 172   tccacgagttcttaccgatccagtactt 199
             |||||||||||||  |||||||||||||
Sbjct: 58487 tccacgagttcttggcgatccagtactt 58514
to top
>emb|BX649477.10| Zebrafish DNA sequence from clone CH211-265K4 in linkage group 5,
             complete sequence
          Length = 148317

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 92095 tatttaatatttatatataa 92114
to top
>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24,
             complete sequence
          Length = 199345

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atttaatatttatatataaa 24
             ||||||||||||||||||||
Sbjct: 89127 atttaatatttatatataaa 89146
to top
>dbj|AB159447.1| Bombyx mori DNA, chromosome 13, clone:534E24, complete sequence
          Length = 124898

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ttatttaatatttatatata 22
             ||||||||||||||||||||
Sbjct: 74217 ttatttaatatttatatata 74236
to top
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 173   ccacgagttcttaccgatccagtacttggtcccgtc 208
             |||||||||| |  |||||||||||||||| |||||
Sbjct: 77014 ccacgagttcctgacgatccagtacttggtgccgtc 76979
to top
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full
           insert sequence
          Length = 1351

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 173 ccacgagttcttaccgatccagtacttggtcccgtc 208
           |||||||||| |  |||||||||||||||| |||||
Sbjct: 952 ccacgagttcctgacgatccagtacttggtgccgtc 917
to top
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full
            insert sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003
to top
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full
            insert sequence
          Length = 1437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 173  ccacgagttcttaccgatccagtacttggtcccgtc 208
            |||||||||| |  |||||||||||||||| |||||
Sbjct: 1038 ccacgagttcctgacgatccagtacttggtgccgtc 1003
to top
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6,
             complete sequence
          Length = 170067

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     attatttaatatttatatat 21
             ||||||||||||||||||||
Sbjct: 56538 attatttaatatttatatat 56519
to top
>emb|CR356237.9| Zebrafish DNA sequence from clone CH211-219P7 in linkage group 22,
             complete sequence
          Length = 62455

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tgtagtgctggaagcagggg 338
             ||||||||||||||||||||
Sbjct: 29657 tgtagtgctggaagcagggg 29676
to top
>emb|BX890562.8| Zebrafish DNA sequence from clone CH211-222H17 in linkage group 4,
             complete sequence
          Length = 195554

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     tatttaatatttatatataa 23
             ||||||||||||||||||||
Sbjct: 87942 tatttaatatttatatataa 87961
to top
>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
              sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ttatttaatatttatatata 22
              ||||||||||||||||||||
Sbjct: 154864 ttatttaatatttatatata 154845
to top
>gb|U32430.1|TAU32430 Triticum aestivum thiol protease mRNA, complete cds
          Length = 1353

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 173  ccacgagttcttaccgatccagtacttg 200
            ||||||||||||  ||||||||||||||
Sbjct: 1038 ccacgagttcttggcgatccagtacttg 1011
to top
>gb|AC154012.5| Mus musculus 6 BAC RP24-496L23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 116902

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     attatttaatatttatatat 21
             ||||||||||||||||||||
Sbjct: 40902 attatttaatatttatatat 40921
to top
>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete
             sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    atatttatatataaaggtat 29
             ||||||||||||||||||||
Sbjct: 87173 atatttatatataaaggtat 87154
to top
>emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, complete sequence
          Length = 142570

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aattatttaatatttatatataaa 24
             |||| |||||||||||||||||||
Sbjct: 58751 aattctttaatatttatatataaa 58728
to top
>emb|X06047.1|MISCTRNA Yeast mitochondrial tRNA genes for tRNA-Ala, tRNA-Tyr and tRNA-Ile
          Length = 1847

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   ttatttaatatttatatata 22
           ||||||||||||||||||||
Sbjct: 519 ttatttaatatttatatata 500
to top
>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH020D15, complete sequence
          Length = 143633

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    atttaatatttatatataaa 24
            ||||||||||||||||||||
Sbjct: 6904 atttaatatttatatataaa 6885
to top
>gb|M77350.1|MUSMHKA1A Mouse hair keratin A1 (MHKA1) gene, complete cds
          Length = 8061

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   ggaggtgccatcatatgata 80
            ||||||||||||||||||||
Sbjct: 5090 ggaggtgccatcatatgata 5109
to top
>emb|AL592545.10| Mouse DNA sequence from clone RP23-374H24 on chromosome 11, complete
              sequence
          Length = 142565

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ggaggtgccatcatatgata 80
              ||||||||||||||||||||
Sbjct: 122541 ggaggtgccatcatatgata 122522


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,909,365
Number of Sequences: 3902068
Number of extensions: 3909365
Number of successful extensions: 106377
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105191
Number of HSP's gapped (non-prelim): 1185
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top