>PALH_KLULA (Q6CXK7) pH-response regulator protein palH/RIM21|
          Length = 519

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 36  IYIFRIQLSTCMLSLVKFQKTLYVSLFFQVRQQPITKGWKYQYMVFPGFYI 188
           +Y+FRI LSTC  S++ F      SL F+ R   +T    +   + P F+I
Sbjct: 249 VYLFRIALSTCYASVICFHVLTKKSLCFRGRMIFLTLLTIFTVFLHPTFFI 299

>AERA_AERSA (Q08676) Aerolysin precursor (Hemolysin-3)|
          Length = 489

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +3

Query: 162 YMVFPGFYIEHKTGIHQVRNNHSIFPRCNSDYDVADQFTLFVDSHRVL-NNNGYILGLRC 338
           Y + P  Y+ H  G   V  NHS  P    D DV    T   D   +  NN+G   G RC
Sbjct: 136 YFIKPVSYLAHYLGYAWVGGNHS--PYVGEDMDV----TRVGDGWLIKGNNDGGCSGYRC 189

Query: 339 GNRS 350
           G +S
Sbjct: 190 GEKS 193

>AERA_AERSO (Q06304) Aerolysin precursor (Hemolysin)|
          Length = 488

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +3

Query: 162 YMVFPGFYIEHKTGIHQVRNNHSIFPRCNSDYDVADQFTLFVDSHRVL-NNNGYILGLRC 338
           Y + P  Y+ H  G   V  NHS  P    D DV    T   D   +  NN+G   G RC
Sbjct: 135 YFIKPVSYLAHYLGYAWVGGNHS--PYVGEDMDV----TRVGDGWLIKGNNDGGCSGYRC 188

Query: 339 GNRS 350
           G +S
Sbjct: 189 GEKS 192

>WDR24_XENLA (Q7ZX22) WD-repeat protein 24|
          Length = 780

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 572 VRCSCCSTVNLVRPVNNIAHVNCGRCRTTLMYPHGAPSVKCAICD 438
           ++ S CS++N +   +   HVNC  C+  +       S K  ICD
Sbjct: 687 IKLSTCSSINCLNQASTTLHVNCSNCKRPM-------SNKGWICD 724

>ALG6_SCHPO (O43053) Probable dolichyl pyrophosphate Man9GlcNAc2|
           alpha-1,3-glucosyltransferase (EC 2.4.1.-)
           (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl
           glucosyltransferase)
          Length = 506

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = +3

Query: 42  IFRIQLSTCMLSLVKFQKTLYVSLFFQVRQQPITKGWKYQYMVFPGFYIEHKTGIHQVRN 221
           IF   L TC+   ++F + + +S         +T  + +  ++FP  Y+++KT + Q+  
Sbjct: 230 IFFYLLGTCVKPKIRFSRFILLS---------VTVVFTFSLILFPWIYMDYKTLLPQIL- 279

Query: 222 NHSIFP 239
            H +FP
Sbjct: 280 -HRVFP 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,265,354
Number of Sequences: 219361
Number of extensions: 2081287
Number of successful extensions: 5174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5174
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)