>YAAH_BACSU (P37531) Spore germination protein yaaH|
          Length = 427

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 10/199 (5%)
 Frame = -3

Query: 704 QFVKQLGEALHSLSSKSSTRNHLELIYVIPAPRMEGPNNQDFGPEDLLQLADSVDGFSLM 525
           QF+++  +  H        R  LE+   +          + +   D     + VD   LM
Sbjct: 225 QFLREARDLFH--------REGLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLM 276

Query: 524 TYD--FSG--PQNPGPSAPLK-WIQYSLTTLLQAKGSASQGHSHMIFLGMNFYGNDFLFS 360
           TY+  +SG  PQ   P  P++  I+Y+LT +   K          I +G N YG D+   
Sbjct: 277 TYEWGYSGGPPQAVSPIGPVRDVIEYALTEMPANK----------IVMGQNLYGYDWTLP 326

Query: 359 KGGGGS---SITGRDFIHLLEKYKPSLQWDDKSSEHFFIYSD-KGVRHAVFYPTLLSLSV 192
              GG+   +++ +  I + ++   S+Q+D  +   FF Y+D +  RH V++    S+  
Sbjct: 327 YTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQA 386

Query: 191 RLDEAQDWG-TGLSIWEIG 138
           + +  ++    G+S W++G
Sbjct: 387 KFNLIKELNLRGISYWKLG 405

>CHI1_COCIM (P54196) Endochitinase 1 precursor (EC 3.2.1.14)|
           (Complement-fixation antigen) (CF-antigen) (CF-AG)
          Length = 426

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
 Frame = -3

Query: 698 VKQLGEALHSLSSKSSTRNHLELIYVIPAPRMEGPNNQDFGPEDLLQLADSVDGFSLMTY 519
           +K   EAL + S+K        L    PA    GP N  +    L ++   +D ++LM Y
Sbjct: 185 LKACREALDAYSAKHPNGKKFLLTIASPA----GPQN--YNKLKLAEMDKYLDFWNLMAY 238

Query: 518 DFSG-------------PQNPGPSAPLKWIQYSLTTLLQAKGSASQGHSHMIFLGMNFYG 378
           DFSG             P    P +       ++   ++A   A++     I LGM  YG
Sbjct: 239 DFSGSWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPANK-----IVLGMPLYG 293

Query: 377 NDFLFSKG--------GGGSSITG-RDFIHLLEKYKPSLQWDDKSSEHFFIYSDKGVRHA 225
             F  + G        GGGS   G  D+  + ++     + +D ++ + +   DK  R+ 
Sbjct: 294 RAFASTDGIGTSFNGVGGGSWENGVWDYKDMPQQGAQVTELEDIAASYSY---DKNKRYL 350

Query: 224 VFYPTLLSLSVRLDEAQDWGTGLSIW 147
           + Y T+     + +     G G  +W
Sbjct: 351 ISYDTVKIAGKKAEYITKNGMGGGMW 376

>CHI1_APHAL (P32470) Chitinase 1 precursor (EC 3.2.1.14)|
          Length = 423

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 24/214 (11%)
 Frame = -3

Query: 713 LALQFVKQLGEALHSLSSKSSTRNHLELIYVIPAPRMEGPNNQDFGPEDLLQLADSVDGF 534
           L LQ V+     L S +++ +  +H  L    PA    GP+N  +      +L   +D  
Sbjct: 184 LLLQAVRS---ELDSYAAQYAKGHHFLLSIAAPA----GPDN--YNKLKFAELGKVLDYI 234

Query: 533 SLMTYDFSG---------------PQNPGPSAPLKWIQYSLTTLLQAKGSASQGHSHMIF 399
           +LM YD++G               PQNP  +       Y+    +QA  +     ++ I 
Sbjct: 235 NLMAYDYAGSWSNYTGHDANIYANPQNPNATP------YNTDDAVQAYINGGVP-ANKIV 287

Query: 398 LGMNFYGNDFLFSKG--------GGGSSITGRDFIHLLEKYKPSLQWDDKSSEHFFIYSD 243
           LGM  YG  F  ++G        G GS   G      L K   +++ DD +++  + Y D
Sbjct: 288 LGMPIYGRSFQQTEGIGKPYNGIGSGSWENGIWDYKALPKAGATVKCDD-TAKGCYSY-D 345

Query: 242 KGVRHAVFYPTLLSLSVRLDEAQDWGT-GLSIWE 144
              +  + + T   +S ++   +  G  G   WE
Sbjct: 346 PSTKELISFDTPAMISTKVSWLKGKGLGGTMFWE 379

>LFTR_RHIME (Q92QK2) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)|
           (L/F-transferase) (Leucyltransferase)
           (Phenyalanyltransferase)
          Length = 204

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
 Frame = -3

Query: 509 GPQNPGPSAPLKWIQYSLTTLLQA-------------KGSASQGHSHMIFLGMNFYGNDF 369
           G   P P  P  WI  ++ +L  A             +G A  G  + + LG  F+G + 
Sbjct: 81  GCAQPAPDRPTTWINDTIRSLYAALHNMGHAHSVEAWEGDALVGGLYGVSLGAAFFG-ES 139

Query: 368 LFSKGGGGSSITGRDFIHLLEKYK 297
           +FS+  G S I     +HL+E+ +
Sbjct: 140 MFSRRTGASKIC---LVHLVERLR 160

>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)|
            (180 kDa bullous pemphigoid antigen 2)
          Length = 1497

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 23/87 (26%), Positives = 37/87 (42%)
 Frame = -3

Query: 590  NQDFGPEDLLQLADSVDGFSLMTYDFSGPQNPGPSAPLKWIQYSLTTLLQAKGSASQGHS 411
            N D    +L+    S D   + ++    P  PGP  P    +   T    ++GS+S  HS
Sbjct: 1242 NSDSFRSELISYLTSPD---VRSFIVGPPGPPGPQGPPGDSRLLSTDASHSRGSSSSSHS 1298

Query: 410  HMIFLGMNFYGNDFLFSKGGGGSSITG 330
              +  G ++  +    S GGGG+   G
Sbjct: 1299 SSVRRGSSYSSS---MSTGGGGAGSLG 1322

>CH3L4_MOUSE (Q91Z98) Chitinase 3-like protein 4 precursor (Secreted protein|
           Ym2)
          Length = 402

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
 Frame = -3

Query: 560 QLADSVDGFSLMTYDFSGPQN--PGPSAPLKWIQY-----------SLTTLLQAKGSASQ 420
           +L+ S+D   +MTYD   P+N   G ++PL    Y           S+ T  +  G+AS+
Sbjct: 199 ELSQSLDYIQVMTYDLHDPKNGYTGENSPLYKSPYDIGKSADLNVDSIITYWKDHGAASE 258

Query: 419 GHSHMIFLGMNFYGNDFLFS 360
                + +G   YG+ F+ S
Sbjct: 259 ----KLIVGFPAYGHTFILS 274

>HV2B_RABIT (P01828) Ig heavy chain V-A2 region K-25|
          Length = 117

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -3

Query: 581 FGPEDLLQLADSVDGFSLMTYDFSGPQNPGPSAPLKWI 468
           F P D L L  +V GFSL  YD S  +   P   L+WI
Sbjct: 11  FKPTDTLTLTCTVSGFSLSGYDMSWVRQ-APGKGLEWI 47

>BAR3_SCHCO (P56502) Pheromone B alpha 3 receptor|
          Length = 625

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = -3

Query: 701 FVKQLGEALHSLSSKSSTRNHLELIYVIPAPRMEGPNNQDFGPEDLLQLADSVDGFSL-- 528
           F  +     H  +SK+         Y +P P  + P++  F   +  +   SVDG  L  
Sbjct: 347 FTSEFSSKAHDFTSKAKQ-------YTLPRPMPQTPSSSGFSSSESTRFGSSVDGKELPS 399

Query: 527 -MTYDFSGP 504
             T +FS P
Sbjct: 400 PTTKEFSSP 408

>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)|
          Length = 699

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
 Frame = -3

Query: 569 DLLQLADSVDGFSLMTYDFSG----------PQNPGPSAPLKWIQYSLTTLLQAKGSASQ 420
           +L ++A  VD  ++MTYDF+G          P N  P+A    +  + T  + A    +Q
Sbjct: 263 ELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAA---GAQ 319

Query: 419 GH------SHMIFLGMNFYG 378
           GH      +  + LG+ FYG
Sbjct: 320 GHLDAGVPAAKLVLGVPFYG 339


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,421,902
Number of Sequences: 219361
Number of extensions: 2311983
Number of successful extensions: 6037
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6032
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)