| Clone Name | rbasd25o14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR675446.2|CNS0FK58 Tetraodon nigroviridis full-length cDNA Length = 724 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgcaa 42 |||||||||||||||||||| Sbjct: 562 tactcagcagcacgtcgcaa 581
>emb|CR669085.2|CNS0FF8J Tetraodon nigroviridis full-length cDNA Length = 677 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgcaa 42 |||||||||||||||||||| Sbjct: 516 tactcagcagcacgtcgcaa 535
>emb|CR733825.2|CNS0GT00 Tetraodon nigroviridis full-length cDNA Length = 1866 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 1708 tactcagcagcacgtcgca 1726
>emb|CR724191.2|CNS0GLQD Tetraodon nigroviridis full-length cDNA Length = 1860 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 1701 tactcagcagcacgtcgca 1719
>emb|CR680721.1|CNS0FO71 Tetraodon nigroviridis full-length cDNA Length = 1130 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 985 tactcagcagcacgtcgca 1003
>emb|CR675728.2|CNS0FKD2 Tetraodon nigroviridis full-length cDNA Length = 1124 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 979 tactcagcagcacgtcgca 997
>emb|CR674200.2|CNS0FJ6M Tetraodon nigroviridis full-length cDNA Length = 593 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 432 tactcagcagcacgtcgca 450
>emb|CR669553.2|CNS0FFLJ Tetraodon nigroviridis full-length cDNA Length = 1043 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 882 tactcagcagcacgtcgca 900
>emb|CR665928.2|CNS0FCSU Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 894 tactcagcagcacgtcgca 912
>emb|CR663641.2|CNS0FB1B Tetraodon nigroviridis full-length cDNA Length = 1636 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 1473 tactcagcagcacgtcgca 1491
>emb|CR658043.2|CNS0F6PT Tetraodon nigroviridis full-length cDNA Length = 1171 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 1024 tactcagcagcacgtcgca 1042
>emb|CR659892.2|CNS0F856 Tetraodon nigroviridis full-length cDNA Length = 1143 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 tactcagcagcacgtcgca 41 ||||||||||||||||||| Sbjct: 988 tactcagcagcacgtcgca 1006
>gb|AF130035.1| Heterocapsa triquetra psbC minicircle, complete sequence; chloroplast Length = 2330 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atgtactcagcagcacgtc 38 ||||||||||||||||||| Sbjct: 1998 atgtactcagcagcacgtc 1980
>gb|AY004271.1| Heterocapsa triquetra clone circle5 aberrant minicircle, complete sequence; chloroplast Length = 2099 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atgtactcagcagcacgtc 38 ||||||||||||||||||| Sbjct: 1593 atgtactcagcagcacgtc 1575
>gb|AY004270.1| Heterocapsa triquetra clone circle4 aberrant minicircle, complete sequence; chloroplast Length = 2045 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atgtactcagcagcacgtc 38 ||||||||||||||||||| Sbjct: 1616 atgtactcagcagcacgtc 1598
>gb|AC012445.6| Homo sapiens BAC clone RP11-86A21 from 2, complete sequence Length = 203428 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 acagagaatttcctgaaga 80 ||||||||||||||||||| Sbjct: 189816 acagagaatttcctgaaga 189798 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 785,772 Number of Sequences: 3902068 Number of extensions: 785772 Number of successful extensions: 41349 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41332 Number of HSP's gapped (non-prelim): 17 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)