ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26a12 |
|---|---|
| Clone Library Name | barley_pub |
>GTE6_ARATH (Q9FT54) Transcription factor GTE6 (GENERAL TRANSCRIPTION FACTOR| GROUP E6) Length = 369 Score = 122 bits (306), Expect = 8e-28 Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 10/174 (5%) Frame = -1 Query: 612 WLQLLPKVENEE--RKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVV 439 W LPKV+ EE R+ E A + E + K ++ +E+ N +LE+L VV Sbjct: 195 WAHFLPKVQEEEKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVV 254 Query: 438 QRCKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLW 259 +RC+K+T +EKR +G L L+P+DL K L +VAQ NP FQ AEEV ++MD E TLW Sbjct: 255 ERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLW 314 Query: 258 RLKFFVREAL--------ERQANTAAAPGKTDENAKRKRDIYNALAKTASKRIR 121 RLKFFV++AL E + T G + +KR+ LA+ +KR R Sbjct: 315 RLKFFVKDALDNAMKKKKEEETKTRELSGAQKKEVSKKRNATTKLAERKTKRSR 368
>NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 587 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/127 (23%), Positives = 53/127 (41%) Frame = -1 Query: 606 QLLPKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCK 427 Q L E R P +T+P D L + + +L + +Q+EEL N + + Sbjct: 305 QELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLATQ-- 362 Query: 426 KMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKF 247 A H+TP+DLS A++ + Q + +H ++ E L K Sbjct: 363 -----------ASNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKM 411 Query: 246 FVREALE 226 F+ +A++ Sbjct: 412 FLGDAVD 418
>NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 585 Score = 39.7 bits (91), Expect = 0.007 Identities = 30/125 (24%), Positives = 51/125 (40%) Frame = -1 Query: 606 QLLPKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCK 427 Q L E R P +T+P D L + + +L + +Q+EEL N + + Sbjct: 303 QELKNAEIALRTQKTPPGLQHENTAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQ-- 360 Query: 426 KMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKF 247 A H+TP+DLS A++ + Q + +H ++ E L K Sbjct: 361 -----------ANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLSYRKM 409 Query: 246 FVREA 232 F+ +A Sbjct: 410 FLGDA 414
>YO036_YEAST (Q08206) Uncharacterized protein YOL036W| Length = 761 Score = 38.9 bits (89), Expect = 0.012 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 3/152 (1%) Frame = -1 Query: 609 LQLLPKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRC 430 +++ P+ + E + + ++ P+D + KLA T D E + +V+ Sbjct: 139 MEITPQFDINEAIFERDDISHSSRLEPDDVLTKLANSTRDATGE------DQGFVVMTHG 192 Query: 429 KKMTTDEKRKLGAGLC-HLTPEDLSKALELVAQDNPD--FQTTAEEVHLDMDAQSETTLW 259 +T++ +L A + + T DLSKALE+ + N ++ E S +TL Sbjct: 193 HDASTNDDSQLSATILDNQTSFDLSKALEMTSHSNISNIINSSGSEGRRSRTPVSNSTL- 251 Query: 258 RLKFFVREALERQANTAAAPGKTDENAKRKRD 163 + E+ ER+ANT ++ +D A + D Sbjct: 252 KPNLSSPESAEREANTTSSSSTSDHGATMQYD 283
>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic| chromosome-associated protein) (MCAP) Length = 1400 Score = 38.1 bits (87), Expect = 0.020 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = -1 Query: 435 RCKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQ-TTAEEVHLDMDAQSETTLW 259 +CK M+ +EKR+L + L E L + + ++ P + + +E+ +D + +TL Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666 Query: 258 RLKFFVREALERQANTAA 205 L+ +V L ++ A Sbjct: 667 ELERYVTSCLRKKRKPQA 684
>NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 599 Score = 38.1 bits (87), Expect = 0.020 Identities = 29/121 (23%), Positives = 52/121 (42%) Frame = -1 Query: 534 SPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLCHLTPEDLSK 355 +P D L + + +L + +Q+EEL N + + A H+TP+DLS Sbjct: 341 APADYFRILVQQFEVQLQQYRQQIEELENHLATQ-------------ANNSHITPQDLSM 387 Query: 354 ALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQANTAAAPGKTDENAK 175 A++ + Q + +H ++ E L K F+ +A++ T A K +N Sbjct: 388 AMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVD-VFETRRAEAKKWQNTP 446 Query: 174 R 172 R Sbjct: 447 R 447
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 38.1 bits (87), Expect = 0.020 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = -1 Query: 435 RCKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQ-TTAEEVHLDMDAQSETTLW 259 +CK M+ +EKR+L + L E L + + ++ P + + +E+ +D + +TL Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665 Query: 258 RLKFFVREALERQANTAA 205 L+ +V L ++ A Sbjct: 666 ELERYVTSCLRKKRKPQA 683
>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12| Length = 509 Score = 35.0 bits (79), Expect = 0.17 Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Frame = -1 Query: 594 KVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTT 415 K+E E+ + E D + ED + K+ DD+ ++ ++EE V+++ KK Sbjct: 40 KMEVEDEEEDEEEDEEDEEEDEEDEEDEEEKEEDDDDDDDEEEIEE---PVIKKSKK--- 93 Query: 414 DEKRKLGAGLCHLTPEDLSKALELVAQDNPDF-QTTAEEVHLD---MDAQSETTL 262 +K L + ++K E VA++ P +T+AEE+ +D D++ E L Sbjct: 94 --NKKSKEESADLEDQYMAKLAEEVAEEKPMVAETSAEEIKVDEPESDSEDEPEL 146
>CI039_HUMAN (Q9NXG0) Protein C9orf39| Length = 1084 Score = 35.0 bits (79), Expect = 0.17 Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = -1 Query: 519 IAKLAKDTDDELNEINRQLEELRNMVVQR-CKKMTTDEKRKLGAGLCHLTPEDLSKALEL 343 + LAK+ ++++ + RQ+ EL+ M R K +T + + L A + +++ DL + L+ Sbjct: 963 VKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTHKAQTLAASILNISRSDLEEILD- 1021 Query: 342 VAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQA 217 + Q E+ +D + E W L ++++ LE Q+ Sbjct: 1022 -----TEDQVEIEKTKIDAENDKE---WML--YIQKLLEGQS 1053
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 33.5 bits (75), Expect = 0.50 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 6/150 (4%) Frame = -1 Query: 594 KVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMV--VQRCKKM 421 +++ +ER+ +E T T+ +D + K KDT+ + ++ RQL+ + + + K Sbjct: 829 EIKEKEREILELKSNLTDSTTQKDKLEKSLKDTESNVLDLQRQLKAEKETLKAMYDSKDA 888 Query: 420 TTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSE----TTLWRL 253 +KR+L + + E K L L N + L+ + Q E TL +L Sbjct: 889 LEAQKRELEIRVEDMESELDEKKLALENLQNQKRSVEEKVRDLEEELQEEQKLRNTLEKL 948 Query: 252 KFFVREALERQANTAAAPGKTDENAKRKRD 163 K E LE T ++ +D Sbjct: 949 KKKYEEELEEMKRVNDGQSDTISRLEKIKD 978
>YFK8_YEAST (P43610) Hypothetical ATP-dependent helicase YFR038W (EC 3.6.1.-)| Length = 853 Score = 33.5 bits (75), Expect = 0.50 Identities = 32/157 (20%), Positives = 61/157 (38%) Frame = -1 Query: 612 WLQLLPKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQR 433 WLQ V ++E ++ D T+ + KLAKDT E ++ +L E+ V Sbjct: 71 WLQ--DDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSL 128 Query: 432 CKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRL 253 K + R+ + L ++ E+ + D + +E H + +T + Sbjct: 129 KLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEH--SSKKRKTKKKSI 186 Query: 252 KFFVREALERQANTAAAPGKTDENAKRKRDIYNALAK 142 F ++ + + T D K+ R + N + K Sbjct: 187 TDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILK 223
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)| Length = 1969 Score = 33.5 bits (75), Expect = 0.50 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 9/85 (10%) Frame = -1 Query: 528 EDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGL---CHLTP---- 370 E AI+ L K D + E+ QLE L Q+ K + EK KL L H T Sbjct: 1199 ETAISSLRKRHGDSVAELTEQLETL-----QKLKAKSEAEKSKLQRDLEESQHATDSEVR 1253 Query: 369 --EDLSKALELVAQDNPDFQTTAEE 301 +DL KAL+ + + QT A+E Sbjct: 1254 SRQDLEKALKTIEVQYSELQTKADE 1278
>KIF5A_PONPY (Q5R9K7) Kinesin heavy chain isoform 5A| Length = 1032 Score = 33.1 bits (74), Expect = 0.66 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 11/152 (7%) Frame = -1 Query: 552 APTTDTSPEDAIAKLAKDTDDELNEINRQ---LEELRNMVVQRCKKM--TTDEKRKLGAG 388 AP E+ I +L K DD+ +EIN+Q +E+L+ ++ + + + T + K+ Sbjct: 410 APEERQKYEEEIRRLYKQLDDKDDEINQQSQLIEKLKQQMLDQEELLVSTRGDNEKVQQE 469 Query: 387 LCHLTPE------DLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALE 226 L HL E ++ + L+ + + ++ ++EV + Q++ + L V L Sbjct: 470 LSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVE-EKSQQNQLLVDELSQKVATMLS 528 Query: 225 RQANTAAAPGKTDENAKRKRDIYNALAKTASK 130 ++ + KR ++ N L K S+ Sbjct: 529 LESELQRLQEVSGHQRKRIAEVLNGLMKDLSE 560
>KIF5A_HUMAN (Q12840) Kinesin heavy chain isoform 5A (Neuronal kinesin heavy| chain) (NKHC) (Kinesin heavy chain neuron-specific 1) Length = 1032 Score = 33.1 bits (74), Expect = 0.66 Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 11/152 (7%) Frame = -1 Query: 552 APTTDTSPEDAIAKLAKDTDDELNEINRQ---LEELRNMVVQRCKKM--TTDEKRKLGAG 388 AP E+ I +L K DD+ +EIN+Q +E+L+ ++ + + + T + K+ Sbjct: 410 APEERQKYEEEIRRLYKQLDDKDDEINQQSQLIEKLKQQMLDQEELLVSTRGDNEKVQRE 469 Query: 387 LCHLTPE------DLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALE 226 L HL E ++ + L+ + + ++ ++EV + Q++ + L V L Sbjct: 470 LSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVE-EKSQQNQLLVDELSQKVATMLS 528 Query: 225 RQANTAAAPGKTDENAKRKRDIYNALAKTASK 130 ++ + KR ++ N L K S+ Sbjct: 529 LESELQRLQEVSGHQRKRIAEVLNGLMKDLSE 560
>GRPE_SALTY (Q7CPZ4) Protein grpE (HSP-70 cofactor)| Length = 196 Score = 33.1 bits (74), Expect = 0.66 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Frame = -1 Query: 588 ENEERKHVEPNDAPTTDTSPEDAIAKLAKDTD-------DELNEINRQLEELRNMVVQRC 430 ++EE + VEPND+ ++ IA L D + I ++E LR Q Sbjct: 21 QHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDI 80 Query: 429 KKMTTDEKRKLGAGLCHLTP--EDLSKALELVAQDNPDFQTTAEEVHLDM 286 +K K L + L P + L +ALE+ + NPD E + L + Sbjct: 81 EKA---HKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTL 127
>GRPE_SALTI (Q8XEY8) Protein grpE (HSP-70 cofactor)| Length = 196 Score = 33.1 bits (74), Expect = 0.66 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Frame = -1 Query: 588 ENEERKHVEPNDAPTTDTSPEDAIAKLAKDTD-------DELNEINRQLEELRNMVVQRC 430 ++EE + VEPND+ ++ IA L D + I ++E LR Q Sbjct: 21 QHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDI 80 Query: 429 KKMTTDEKRKLGAGLCHLTP--EDLSKALELVAQDNPDFQTTAEEVHLDM 286 +K K L + L P + L +ALE+ + NPD E + L + Sbjct: 81 EKA---HKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTL 127
>HSP88_NEUCR (O74225) Heat shock protein Hsp88| Length = 707 Score = 32.7 bits (73), Expect = 0.86 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 25/180 (13%) Frame = -1 Query: 594 KVENEERKHVEP--NDAPTTDTSPEDAIA----------KLAKDTDDELNEINRQLEELR 451 KV+ + RK P + P+ D + ++A KL DT+++ NE+ + +LR Sbjct: 527 KVKKQVRKGELPVVSATPSLDPAAKNAAIEREQAMIMEDKLVADTEEKKNELETYIYDLR 586 Query: 450 NMVVQRCKKMTT-DEKRKLGAGLCHLTP------EDLSKAL------ELVAQDNPDFQTT 310 N + + + + +EK K+ A L + +D +KA+ E+ A P Q Sbjct: 587 NKLDDQYADLASEEEKEKIRAKLMEVEDWLYDEGDDATKAVYVAKIEEIRALAGPVVQRY 646 Query: 309 AEEVHLDMDAQSETTLWRLKFFVREALERQANTAAAPGKTDENAKRKRDIYNALAKTASK 130 ++V + R+AL+ + A K +E A++ ++ A+ +K Sbjct: 647 FDKVEAE----------------RQALQEKLEAEKAAKKAEEEARKAKEAAEKAAQEGAK 690
>HOOK1_MOUSE (Q8BIL5) Hook homolog 1| Length = 728 Score = 32.7 bits (73), Expect = 0.86 Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 6/103 (5%) Frame = -1 Query: 588 ENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDE 409 E E+KH + N+ T E ++K + + E+ +Q+E+L+ + ++ K + Sbjct: 494 EQLEQKHRKMNELET-----EQRLSK------ERIGELQQQIEDLQKSLQEQGSKSEGES 542 Query: 408 ----KRKLGAGLCHLTP--EDLSKALELVAQDNPDFQTTAEEV 298 K+KL A + LT E+L K EL+ PD A+++ Sbjct: 543 SSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDISQNAQKI 585
>FA53B_HUMAN (Q14153) Protein FAM53B| Length = 422 Score = 32.7 bits (73), Expect = 0.86 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +3 Query: 285 PCQGALLLL*FGSQDCLVRPAPAPC*DLPESGGKDLHQVFSSRL---WSFSCISE 440 PC A L FG Q C P APC ++ DLH V RL S SC E Sbjct: 180 PCDQAGLHHRFGGQPCQGVPGSAPCGQAGDTWSPDLHPVGGGRLDLQRSLSCSHE 234
>DPOL_BPT4 (P04415) DNA polymerase (EC 2.7.7.7) (Gp43)| Length = 898 Score = 32.7 bits (73), Expect = 0.86 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -1 Query: 582 EERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTT 415 E K + A + T PE + + K +DD LNE++ E + N +++ C+K T Sbjct: 494 EAIKKIIMKGAGSCSTKPE--VERYVKFSDDFLNELSNYTESVLNSLIEECEKAAT 547
>KIF5A_MOUSE (P33175) Kinesin heavy chain isoform 5A (Neuronal kinesin heavy| chain) (NKHC) (Kinesin heavy chain neuron-specific 1) Length = 1027 Score = 32.0 bits (71), Expect = 1.5 Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 11/152 (7%) Frame = -1 Query: 552 APTTDTSPEDAIAKLAKDTDDELNEINRQ---LEELRNMVVQRCKKM--TTDEKRKLGAG 388 AP E+ I +L K DD+ +EIN+Q +E+L+ ++ + + + T + K+ Sbjct: 410 APEERQKYEEEIRRLYKQLDDKDDEINQQSQLIEKLKQQMLDQEELLVSTRGDNEKVQRE 469 Query: 387 LCHLTPE------DLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALE 226 L HL E ++ + L+ + + ++ ++EV + Q++ + L V L Sbjct: 470 LSHLQSENDAAKDEVKEVLQALEELAVNYDQKSQEVE-EKSQQNQLLVDELSQKVATMLS 528 Query: 225 RQANTAAAPGKTDENAKRKRDIYNALAKTASK 130 ++ + KR ++ N L + S+ Sbjct: 529 LESELQRLQEVSGHQRKRIAEVLNGLMRDLSE 560
>LVA_DROME (Q8MSS1) Protein lava lamp| Length = 2779 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/60 (28%), Positives = 28/60 (46%) Frame = -1 Query: 588 ENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDE 409 E E+ ++A TD +AK ++ ++L ++ EELR V + K TDE Sbjct: 347 EQEKASRSPQSEAAHTDAQVSAELAKQLQELTNQLADLQATNEELRQQVAAQAKLQVTDE 406
>GA45G_RAT (Q9WTQ7) Growth arrest and DNA-damage-inducible protein GADD45| gamma Length = 159 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 262 EGSLALSIHVK-VHFFCCSLEVRIVLCDQLQRLAKI 366 EG +AL IH + FCC ++ IV +QRLA I Sbjct: 69 EGDIALQIHFTLIQAFCCENDIDIVRVGDVQRLAAI 104
>GA45G_MOUSE (Q9Z111) Growth arrest and DNA-damage-inducible protein GADD45| gamma (Cytokine-responsive protein CR6) Length = 159 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 262 EGSLALSIHVK-VHFFCCSLEVRIVLCDQLQRLAKI 366 EG +AL IH + FCC ++ IV +QRLA I Sbjct: 69 EGDIALQIHFTLIQAFCCENDIDIVRVGDVQRLAAI 104
>GA45G_HUMAN (O95257) Growth arrest and DNA-damage-inducible protein GADD45| gamma (Cytokine-responsive protein CR6) Length = 159 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 262 EGSLALSIHVK-VHFFCCSLEVRIVLCDQLQRLAKI 366 EG +AL IH + FCC ++ IV +QRLA I Sbjct: 69 EGDIALQIHFTLIQAFCCENDIDIVRVGDVQRLAAI 104
>FA53B_MOUSE (Q8BGR5) Protein FAM53B| Length = 422 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Frame = +3 Query: 285 PCQGALLLL*FGSQDCLVRPAPAPC*DLPESGGKDLHQVFSSRL---WSFSCISE 440 PC + L FG Q C P APC +S D H V RL S SC E Sbjct: 181 PCHQSSLHHRFGGQPCQGAPGSAPCGQAGDSWSPDPHPVGGGRLDLQRSLSCSHE 235
>PEX3_MACFA (Q60HE1) Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal| assembly protein PEX3) Length = 373 Score = 30.8 bits (68), Expect = 3.3 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 20/78 (25%) Frame = -1 Query: 486 LNEINRQLEELRNMVVQR---------------CKKMTTDEKRKLGAGLCHLTPEDLSKA 352 L ++ ++L+E+RN+V Q C M DE+ L C L+P D++ Sbjct: 202 LLDLEQKLKEIRNLVEQHKSSSWINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDIT-T 260 Query: 351 LELVAQ-----DNPDFQT 313 ++L+ + ++PDF T Sbjct: 261 IKLLNETRDMLESPDFST 278
>PEX3_HUMAN (P56589) Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal| assembly protein PEX3) Length = 373 Score = 30.8 bits (68), Expect = 3.3 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 20/78 (25%) Frame = -1 Query: 486 LNEINRQLEELRNMVVQR---------------CKKMTTDEKRKLGAGLCHLTPEDLSKA 352 L ++ ++L+E+RN+V Q C M DE+ L C L+P D++ Sbjct: 202 LLDLEQKLKEIRNLVEQHKSSSWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDIT-T 260 Query: 351 LELVAQ-----DNPDFQT 313 ++L+ + ++PDF T Sbjct: 261 IKLLNETRDMLESPDFST 278
>HXA4_MORSA (Q9PWD2) Homeobox protein Hox-A4| Length = 248 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +1 Query: 82 PEPIRNAHAPRLSPDPFRGGLG*SVVDVALPLRVFVGLARG 204 P+P+ +H PRL+ P G + D +L V+ G+A+G Sbjct: 83 PQPVPQSHGPRLTAAPDGGAGANASKDCSLASEVYPGVAKG 123
>SET1_SCHPO (Q9Y7R4) Histone-lysine N-methyltransferase, H3 lysine-4 specific| (EC 2.1.1.43) (Set1 complex component set1) (Set1C component set1) (COMPASS component set1) (SET domain-containing protein 1) (Spset1) Length = 920 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Frame = -3 Query: 226 TTGQHSRSPWQDRRKREEEARHLQ-------RSSQDRLETDQEIALAHG 101 + G ++S Q RR+R EAR L SS E+DQE+ L+ G Sbjct: 458 SAGSKTKSKLQRRRRRRHEARPLHYQLNQMYNSSASEAESDQELLLSSG 506
>PHOU1_THEMA (Q9X0Y7) Phosphate transport system protein phoU homolog 1| Length = 232 Score = 30.0 bits (66), Expect = 5.6 Identities = 12/42 (28%), Positives = 26/42 (61%) Frame = -1 Query: 558 NDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQR 433 NDA + + + +A+ ++DD ++E+NR++EE ++ R Sbjct: 30 NDAIESLETMNETLARKVLESDDMIDELNREIEEKAYQIIAR 71
>OLEO1_SOYBN (P29530) P24 oleosin isoform A (P89)| Length = 226 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/92 (27%), Positives = 35/92 (38%) Frame = -1 Query: 411 EKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREA 232 E + L L++A E V Q + +EV D+ ++++ T REA Sbjct: 135 ETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQDTREAAARDAREA 194 Query: 231 LERQANTAAAPGKTDENAKRKRDIYNALAKTA 136 R A AAA E KR A TA Sbjct: 195 AARDAREAAARDAKVEARDVKRTTVTATTATA 226
>YID7_YEAST (P40534) Hypothetical 75.0 kDa protein in NOT3-CKA1 intergenic| region Length = 656 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = -1 Query: 612 WLQLLPKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQR 433 WLQL + + +T+ + +I K + T+ E N + L ++N V ++ Sbjct: 258 WLQLKRNFTANLQNEISILSGGSTEVTSSTSIIKRSLKTNSEENSV---LSAVKNHVFRK 314 Query: 432 CKKMT 418 CK+MT Sbjct: 315 CKRMT 319
>IWS1_MOUSE (Q8C1D8) IWS1-like protein| Length = 766 Score = 30.0 bits (66), Expect = 5.6 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -1 Query: 600 LPKVENEERKHVEPNDAPTTDTSPEDAIAKLAK-DTDDELNEINRQLEELRN 448 LPK + + +P P +D+ EDA K D+DD E R+ E++N Sbjct: 242 LPKPRVSDSESEDPQKGPASDSEAEDASRHKEKPDSDDSDGENKREDSEVQN 293
>DPB2_SCHPO (O94263) DNA polymerase epsilon subunit B (EC 2.7.7.7) (DNA| polymerase II subunit B) Length = 594 Score = 30.0 bits (66), Expect = 5.6 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = +1 Query: 304 FCCSLEVRIVLCDQLQRLAKIFRSQVAKTCTKFSLLVCGHFLASLNHH 447 F C EV + L KIF+ + F +++CG F++S H+ Sbjct: 332 FVCISEVHLDNHQTFYALEKIFQKYESSEAVPFCIILCGSFMSSAFHN 379
>CR1BC_BACTM (Q45774) Pesticidal crystal protein cry1Bc (Insecticidal| delta-endotoxin CryIB(c)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1233 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = -1 Query: 504 KDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQDNP 325 ++ DELN NR EE+ CK T ++ + C E A E+ A+ + Sbjct: 1101 EENTDELNFKNRVEEEIYPPDTGTCKYYTENQGTRTCGNECGSRNEGYDNAYEINAKSSL 1160 Query: 324 DFQTTAEE 301 +++ T EE Sbjct: 1161 EYRPTYEE 1168
>NRDC_PONPY (Q5R4H6) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1152 Score = 30.0 bits (66), Expect = 5.6 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = -1 Query: 594 KVENEERKHVEPNDAPTTDTSPE--DAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKM 421 +VE EE E + A D E D + + DD+L+ + +LEEL R KK Sbjct: 148 EVEEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEHDDDLDTEDNELEELEERAEARKKKT 207 Query: 420 TTDEKRKLGAGLC 382 T +++ A LC Sbjct: 208 T---EKQSAAALC 217
>DNAK_BACTN (Q89YW6) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 638 Score = 29.6 bits (65), Expect = 7.2 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = -1 Query: 513 KLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLCHL----TPEDLSKALE 346 K ++ D+LN+ + + + N + + K+ D+K + A L L +DL+ Sbjct: 521 KKEREKIDKLNQADSVIFQTENQLKELGDKLPADKKAPIEAALQKLKDAHKSQDLAAIDT 580 Query: 345 LVAQDNPDFQTTAEEVHLDMDAQ 277 +A+ N FQT + E++ AQ Sbjct: 581 AMAEINTVFQTASAEMYAQGGAQ 603
>CUTL1_RAT (P53565) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (CDP2) (Fragment) Length = 862 Score = 29.6 bits (65), Expect = 7.2 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 5/99 (5%) Frame = -1 Query: 606 QLLPKVE-NEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNM-VVQR 433 Q P +E ++E K EP+D PT+D+ P + L+ + + E+ EL + +R Sbjct: 418 QPCPTIETSKEGKPPEPSDPPTSDSQPTTPL-PLSGHSALSIQELVAMSPELDTYGITKR 476 Query: 432 CKKMTTDE---KRKLGAGLCHLTPEDLSKALELVAQDNP 325 K++ TD +R G + LT +S +L+A+ P Sbjct: 477 VKEVLTDNNLGQRLFGETILGLTQGSVS---DLLARPKP 512
>REV1_YEAST (P12689) DNA repair protein REV1 (EC 2.7.7.-)| Length = 985 Score = 29.6 bits (65), Expect = 7.2 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 492 DELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLC 382 ++LNEIN+ ++ +++RCK + + +G G C Sbjct: 652 EKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRC 688
>GA45B_HUMAN (O75293) Growth arrest and DNA-damage-inducible protein GADD45 beta| (Negative growth-regulatory protein MyD118) (Myeloid differentiation primary response protein MyD118) Length = 160 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 262 EGSLALSIHVK-VHFFCCSLEVRIVLCDQLQRLAKI 366 E +AL IH + FCC ++ IV +QRLA++ Sbjct: 66 EDDIALQIHFTLIQSFCCDNDINIVRVSGMQRLAQL 101
>DYHC_CAEEL (Q19020) Dynein heavy chain, cytosolic (DYHC)| Length = 4568 Score = 29.3 bits (64), Expect = 9.5 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Frame = -1 Query: 612 WLQLLPKVENEERKHVEPNDAPTTDTSPEDAI--AKLAKDTDDELNEINRQLEELRNMVV 439 WLQLLPK + R+ VE P + ++L KD +LNEI+ V Sbjct: 4324 WLQLLPKEIVKMRRTVENIKDPLFRFFEREVNLGSQLLKDIRRDLNEIS---------AV 4374 Query: 438 QRCKKMTTDEKRKLGAGL 385 R +K +E R L A L Sbjct: 4375 CRAEKKQNNETRALAASL 4392
>AIM1_HUMAN (Q9Y4K1) Absent in melanoma 1 protein| Length = 1723 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -2 Query: 227 NDRPTQPQPLARPTKTRRGSATSTTL*PRPPRNG 126 +DR QP P + PTK R+G + + P PP +G Sbjct: 92 SDRSKQPPPASSPTK-RKGRSRALEAVPAPPASG 124
>INVO_PONPY (P14708) Involucrin| Length = 835 Score = 29.3 bits (64), Expect = 9.5 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%) Frame = -1 Query: 597 PKVENEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMT 418 P+ + +++H E ++ +PE + + D +LNE QLEE + ++ QR + Sbjct: 82 PQEQELQQQHWEQHEEHQKAENPEQQLKQEKAQRDQQLNE---QLEEEKKLLDQRLDQEL 138 Query: 417 TDEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQ-TTAEEVHLDMDAQSETTLWRLK 250 +LG + E L LEL Q + +E L++ Q E L L+ Sbjct: 139 VKRDEQLG-----MKKEQL---LELPEQQEQHLKHLEQQEGQLELPEQQEGQLKHLE 187
>NEF_SIVML (P11262) Nef protein (Negative factor) (F-protein) (3'ORF)| Length = 262 Score = 29.3 bits (64), Expect = 9.5 Identities = 11/43 (25%), Positives = 24/43 (55%) Frame = -3 Query: 244 CEGSFGTTGQHSRSPWQDRRKREEEARHLQRSSQDRLETDQEI 116 CEG GQ+ +PW++ + +E+ + +++ D E D ++ Sbjct: 54 CEGQKYNQGQYMNTPWRNPAEEKEKLAYRKQNMDDIDEEDDDL 96
>HSP7F_CANAL (Q96VB9) Heat shock protein homolog SSE1 (Chaperone protein MSI3)| Length = 702 Score = 29.3 bits (64), Expect = 9.5 Identities = 17/64 (26%), Positives = 33/64 (51%) Frame = -1 Query: 513 KLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLCHLTPEDLSKALELVAQ 334 KL DT++ N++ + ELR + + K +D++++ +GL L KA + + + Sbjct: 566 KLVFDTEERKNQLEEYIYELRGKLDEEYKDFASDQEKEKLSGL-------LMKAEDWLYE 618 Query: 333 DNPD 322 D D Sbjct: 619 DGED 622
>DEND_HUMAN (O94850) Dendrin| Length = 657 Score = 29.3 bits (64), Expect = 9.5 Identities = 20/50 (40%), Positives = 21/50 (42%) Frame = -2 Query: 218 PTQPQPLARPTKTRRGSATSTTL*PRPPRNGSGDSLGAWAFLMGSGCFFG 69 PT P A P +T G T L PR R D LGAW G G G Sbjct: 198 PTSSAPAATPARTD-GGRTKKRLDPRIYR----DVLGAWGLRQGQGLLGG 242
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)| (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution related gene on chromosome 14) Length = 1979 Score = 29.3 bits (64), Expect = 9.5 Identities = 28/155 (18%), Positives = 71/155 (45%), Gaps = 3/155 (1%) Frame = -1 Query: 585 NEERKHVEPNDAPTTDTSPEDAIAKLAKDTDDELNEINR-QLEELRNMVVQRCK--KMTT 415 +EER+ ++ +++ D E + L + E +++++ + E L + +R K+ Sbjct: 980 HEERQDIQTDNS---DIFQETKVQSLNIENGSEKHDLSKAETERLVKGIKERELEIKLLN 1036 Query: 414 DEKRKLGAGLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVRE 235 ++ L + L+ +++ K +++ Q D + A + + ++ ++ + Sbjct: 1037 EKNISLTKQIDQLSKDEVGKLTQIIQQK--DLEIQALHARISSTSHTQDVVYLQQQLQAY 1094 Query: 234 ALERQANTAAAPGKTDENAKRKRDIYNALAKTASK 130 A+ER+ A KT EN+ K + + + A+K Sbjct: 1095 AMEREKVFAVLNEKTRENSHLKTEYHKMMDIVAAK 1129
>KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heavy chain)| (UKHC) Length = 963 Score = 29.3 bits (64), Expect = 9.5 Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 7/140 (5%) Frame = -1 Query: 528 EDAIAKLAKDTDDELNEINRQ---LEELRNMVVQRCKKM--TTDEKRKLGAGLCHLTPE- 367 E+ IAKL K DD+ EIN+Q +E+L+ ++ + + + T ++ + A L L E Sbjct: 422 EEEIAKLYKQLDDKDEEINQQSQLVEKLKTQMLDQEELLASTRRDQDNMQAELNRLQAEN 481 Query: 366 DLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQANTAAAP-GKT 190 D SK ++ + EE+ ++ D +S+ + K + E L + N +A Sbjct: 482 DASK------EEVKEVLQALEELAVNYDQKSQEVEDKTKEY--ELLSDELNQKSATLASI 533 Query: 189 DENAKRKRDIYNALAKTASK 130 D ++ +++ N K A++ Sbjct: 534 DAELQKLKEMTNHQKKRAAE 553 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,387,559 Number of Sequences: 219361 Number of extensions: 1860414 Number of successful extensions: 7600 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 6971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7577 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
