ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd26a02 |
|---|---|
| Clone Library Name | barley_pub |
>NUBM_ASPNG (Q92406) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) Length = 496 Score = 228 bits (582), Expect = 7e-60 Identities = 108/141 (76%), Positives = 124/141 (87%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS P+LPK ICDD LMD+DALK QSGLGTAAV+VMDKSTD+V AI+RLS Sbjct: 326 DNLLAVIPGGSSTPVLPKTICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLS 385 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYKHESCGQCTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG+A Sbjct: 386 TFYKHESCGQCTPCREGSKWTMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALGEAF 445 Query: 222 AWPVQGLIRHFRPELERRIRD 160 AWP+QGLIRHFRPELE RIR+ Sbjct: 446 AWPIQGLIRHFRPELEARIRE 466
>NUBM_NEUCR (P24917) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) Length = 493 Score = 227 bits (579), Expect = 2e-59 Identities = 107/140 (76%), Positives = 122/140 (87%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS P+LPKHICD LMD+DALK QSGLGTAA++VMDKSTDVV AI+RLS Sbjct: 324 DNLLAVIPGGSSTPILPKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLS 383 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 +FY+HESCGQCTPCREG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A Sbjct: 384 HFYRHESCGQCTPCREGSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAF 443 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWP+QGLIRHFRPELE RIR Sbjct: 444 AWPIQGLIRHFRPELEARIR 463
>NUOF_RHOCA (O07948) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 431 Score = 217 bits (552), Expect = 2e-56 Identities = 95/141 (67%), Positives = 118/141 (83%) Frame = -3 Query: 579 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSY 400 NL AVIPGG+S P++P H+C+D +MDYD ++ QS GTA ++VMD+ TD++ AIARLS Sbjct: 280 NLKAVIPGGASCPVIPAHLCEDAIMDYDGMREKQSSFGTACLIVMDQQTDIIKAIARLSK 339 Query: 399 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 220 F+KHESCGQCTPCREGT W+W +MERL G A++EEIDML VTKQ+EGHTICALGDAAA Sbjct: 340 FFKHESCGQCTPCREGTSWMWRVMERLVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAA 399 Query: 219 WPVQGLIRHFRPELERRIRDR 157 WP+QGLIRH+R E+E RI+ R Sbjct: 400 WPIQGLIRHYREEIEDRIKAR 420
>NUOF1_RHIME (P56912) NADH-quinone oxidoreductase chain F 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain F 1) (NDH-1, chain F 1) Length = 434 Score = 216 bits (551), Expect = 3e-56 Identities = 101/139 (72%), Positives = 118/139 (84%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSSVP +P D +MDYD L+ + SGLGTAAV+VMDKSTD++ AI RLS Sbjct: 278 DNLLAVIPGGSSVPCVPGAQMKDAIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLS 337 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYKHESCGQCTPCREGTGW+ +MER+ G A+ EIDML +VTKQ+EGHTICALGDAA Sbjct: 338 AFYKHESCGQCTPCREGTGWMMRVMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAA 397 Query: 222 AWPVQGLIRHFRPELERRI 166 AWP+QGLI+HFRPE+E+RI Sbjct: 398 AWPIQGLIKHFRPEMEKRI 416
>NUBM_BOVIN (P25708) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 214 bits (546), Expect = 1e-55 Identities = 102/145 (70%), Positives = 119/145 (82%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL Sbjct: 312 DNLLAVIPGGSSTPLIPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLI 371 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD A Sbjct: 372 EFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGA 431 Query: 222 AWPVQGLIRHFRPELERRIRDRADR 148 AWPVQGLIRHFRPELE R++ A + Sbjct: 432 AWPVQGLIRHFRPELEERMQQFAQQ 456
>NUOF_RICPR (Q9ZE33) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 421 Score = 214 bits (545), Expect = 1e-55 Identities = 100/140 (71%), Positives = 119/140 (85%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 +NL A+IPGG+SVPLLPK +C+ V MD+D+L+ V SGLGT ++VMDKSTD++ AIARLS Sbjct: 278 NNLKAIIPGGASVPLLPKSLCE-VEMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLS 336 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FY HESCGQCTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAA Sbjct: 337 KFYMHESCGQCTPCREGTGWMWRVMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAA 396 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWP+QGLIRHFR E+E+RI+ Sbjct: 397 AWPIQGLIRHFRDEIEQRIK 416
>NUBM_HUMAN (P49821) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 214 bits (545), Expect = 1e-55 Identities = 101/140 (72%), Positives = 117/140 (83%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL Sbjct: 312 DNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLI 371 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD A Sbjct: 372 EFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGA 431 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWPVQGLIRHFRPELE R++ Sbjct: 432 AWPVQGLIRHFRPELEERMQ 451
>NUBM_MOUSE (Q91YT0) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 214 bits (544), Expect = 2e-55 Identities = 101/140 (72%), Positives = 117/140 (83%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL Sbjct: 312 DNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLI 371 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYKHESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD A Sbjct: 372 EFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGA 431 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWPVQGLIRHFRPELE R++ Sbjct: 432 AWPVQGLIRHFRPELEDRMQ 451
>NUBM_MACFA (Q8HXQ9) NADH-ubiquinone oxidoreductase 51 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-51KD) (CI-51KD) (NADH dehydrogenase flavoprotein 1) Length = 464 Score = 212 bits (539), Expect = 7e-55 Identities = 100/140 (71%), Positives = 117/140 (83%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAV+VMD+STD+V AIARL Sbjct: 312 DNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLI 371 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FYK+ESCGQCTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD A Sbjct: 372 EFYKYESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGA 431 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWPVQGLIRHFRPELE R++ Sbjct: 432 AWPVQGLIRHFRPELEERMQ 451
>NUOF_RICCN (Q92JB2) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 421 Score = 211 bits (538), Expect = 9e-55 Identities = 99/140 (70%), Positives = 116/140 (82%) Frame = -3 Query: 582 DNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 DNL A+IPGGSSVPLLPK +C+ V MD+D+L+ SGLGT ++VMD+STD++ AIARLS Sbjct: 278 DNLKAIIPGGSSVPLLPKSLCE-VDMDFDSLRTAGSGLGTGGIIVMDQSTDIIYAIARLS 336 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FY HESCGQCTPCREGTGW+W +M RL GN K EID L VTK+IEGHTICALGDAA Sbjct: 337 KFYMHESCGQCTPCREGTGWMWRVMMRLVKGNVKKSEIDELLNVTKEIEGHTICALGDAA 396 Query: 222 AWPVQGLIRHFRPELERRIR 163 AWP+QGLIRHFR E+E RI+ Sbjct: 397 AWPIQGLIRHFRSEIEARIK 416
>NQO1_PARDE (P29913) NADH-quinone oxidoreductase chain 1 (EC 1.6.99.5) (NADH| dehydrogenase I, chain 1) (NDH-1, chain 1) Length = 431 Score = 202 bits (515), Expect = 4e-52 Identities = 94/139 (67%), Positives = 117/139 (84%) Frame = -3 Query: 579 NLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSY 400 NL AVIPGG+S P+L C++ +MDYD ++ V+S GTA ++VMD+STDVV AI RLS Sbjct: 280 NLKAVIPGGASCPVLTAEQCENAIMDYDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSK 339 Query: 399 FYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAA 220 F+KHESCGQCTPCREGTGW+ +MERL G+A++EEIDML +VTKQ+EGHTICALGDAAA Sbjct: 340 FFKHESCGQCTPCREGTGWMMRVMERLVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAA 399 Query: 219 WPVQGLIRHFRPELERRIR 163 WP+QGLIR+FR E+E RI+ Sbjct: 400 WPIQGLIRNFREEIEDRIK 418
>NUOF_MYCTU (P65567) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 131 bits (329), Expect = 2e-30 Identities = 68/128 (53%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Frame = -3 Query: 561 PGGSSVPLLP-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGGSS PLL +H+ DV +DY+ + A S LGT A+ + D++T VV A+ R + FYKHE Sbjct: 294 PGGSSTPLLTDEHL--DVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHE 351 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQG 205 SCG+CTPCREGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV Sbjct: 352 SCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMS 411 Query: 204 LIRHFRPE 181 I+HFR E Sbjct: 412 SIKHFRDE 419
>NUOF_MYCBO (P65568) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 131 bits (329), Expect = 2e-30 Identities = 68/128 (53%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Frame = -3 Query: 561 PGGSSVPLLP-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGGSS PLL +H+ DV +DY+ + A S LGT A+ + D++T VV A+ R + FYKHE Sbjct: 294 PGGSSTPLLTDEHL--DVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHE 351 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQG 205 SCG+CTPCREGT WL I ERL+ G E+ID L +++ I G + CALGD AA PV Sbjct: 352 SCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMS 411 Query: 204 LIRHFRPE 181 I+HFR E Sbjct: 412 SIKHFRDE 419
>NUOF_STRCO (Q9XAQ9) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 449 Score = 122 bits (307), Expect = 6e-28 Identities = 59/136 (43%), Positives = 86/136 (63%), Gaps = 1/136 (0%) Frame = -3 Query: 561 PGGSSVPLLP-KHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGGSS P+ +H+ DV +DY+ + A S LGT A+ D++T VV A+ R + FY HE Sbjct: 296 PGGSSTPMFTDEHL--DVPLDYEGVGAAGSMLGTKALQCFDETTCVVRAVTRWTEFYAHE 353 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQG 205 SCG+CTPCREGT WL ++ ++ G ++ ++D L ++ I G + CALGD AA P+ Sbjct: 354 SCGKCTPCREGTYWLVQLLRDIEAGKGQMSDLDKLNDIADNINGKSFCALGDGAASPIFS 413 Query: 204 LIRHFRPELERRIRDR 157 +++FR E E I R Sbjct: 414 SLKYFREEYEEHITGR 429
>NUOF2_RHIME (P56913) NADH-quinone oxidoreductase chain F 2 (EC 1.6.99.5) (NADH| dehydrogenase I, chain F 2) (NDH-1, chain F 2) Length = 421 Score = 122 bits (307), Expect = 6e-28 Identities = 60/138 (43%), Positives = 89/138 (64%) Frame = -3 Query: 570 AVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYK 391 AVIPGG S P++P+ + V MD+D+L A S LG+A V+V+D ST +V R+ F+ Sbjct: 280 AVIPGGVSAPVIPEGELE-VGMDFDSLTAAGSMLGSAGVVVIDDSTCMVKLATRIIEFFH 338 Query: 390 HESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPV 211 HESCG+CTPCREG W ++ R++ G + +++ L+ + K I G+T CALGD AA + Sbjct: 339 HESCGKCTPCREGLDWTVKVLRRIEAGEGETGDLEQLEMLCKGIFGNTFCALGDGAAMGL 398 Query: 210 QGLIRHFRPELERRIRDR 157 + ++HFR E I +R Sbjct: 399 RAALKHFRAEFVAHIEER 416
>NQO1_THET8 (Q56222) NADH-quinone oxidoreductase subunit 1 (EC 1.6.99.5) (NADH| dehydrogenase I chain 1) (NDH-1 subunit 1) Length = 438 Score = 114 bits (284), Expect = 3e-25 Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 4/142 (2%) Frame = -3 Query: 570 AVIPGGSSVPLLPKHICDDVL---MDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSY 400 A+IPGGSS P LP ++VL M Y+ L+A S LGT V+++ + +VDA+ L+ Sbjct: 289 AIIPGGSSTPPLP--FTEEVLDTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTR 346 Query: 399 FYKHESCGQCTPCREG-TGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAA 223 FY HESCG+CTPCREG G++ + ++ G + ++++ L+ + IEG + C L DAA Sbjct: 347 FYAHESCGKCTPCREGVAGFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAA 406 Query: 222 AWPVQGLIRHFRPELERRIRDR 157 WPV+G +RHF+ + R++ Sbjct: 407 VWPVKGSLRHFKDQYLALAREK 428
>NUOF_BUCBP (Q89AU2) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 444 Score = 93.2 bits (230), Expect = 5e-19 Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 2/131 (1%) Frame = -3 Query: 561 PGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGG+S L+ KH+ DV MD+ +K V S LGTA M +D S +V + + F+ E Sbjct: 295 PGGASTSFLIDKHL--DVPMDFVNIKKVGSRLGTALAMAVDDSVSIVSLVRNIEEFFSRE 352 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQ 208 SCG CTPCR+G W+ I++ L+ E+I++L+++ +Q+ G T CA A P++ Sbjct: 353 SCGFCTPCRDGLPWIVKILKVLEQKIGVPEDIEILEQLCEQLGPGRTFCAHAPGAIEPLK 412 Query: 207 GLIRHFRPELE 175 +++FR E E Sbjct: 413 SALKYFRLEFE 423
>NUOF_BUCAP (Q8K9Y3) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 447 Score = 89.4 bits (220), Expect = 7e-18 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 2/134 (1%) Frame = -3 Query: 561 PGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGG+ L+ KH+ D+ MD+ ++ S LGTA M +D T+++ + + F+ E Sbjct: 293 PGGAGTDFLIEKHL--DLPMDFTSIAKAGSRLGTAIAMAVDNKTNMISLVCNIEKFFSRE 350 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDAAAWPVQ 208 SCG CTPCREG W+ I+E L+ ++ L+ + + G T CA A P+Q Sbjct: 351 SCGLCTPCREGLPWIVKILESLEKKEGHKNDVKNLERLCLDLSPGKTFCAHAPGAVEPLQ 410 Query: 207 GLIRHFRPELERRI 166 I++FR E E I Sbjct: 411 SAIKYFRLEFEAGI 424
>NUOF_BUCAI (P57256) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 444 Score = 87.0 bits (214), Expect = 4e-17 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 2/143 (1%) Frame = -3 Query: 579 NLLAVIPGGSSVP-LLPKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLS 403 +L A PGG+ LL +H+ D+ MD+ + S LGTA M +D T +V + + Sbjct: 288 SLKAWQPGGAGTDFLLEEHL--DLPMDFKNISQAGSRLGTALSMAVDNKTSMVSLVYNIE 345 Query: 402 YFYKHESCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIE-GHTICALGDA 226 F+ ESCG CTPCR+G W+ I++ L+ ++ L+++ + G T CA Sbjct: 346 KFFSRESCGLCTPCRDGLPWIVKILKSLEQNKGHKNDVKNLEKLCSHLSPGKTFCAHAPG 405 Query: 225 AAWPVQGLIRHFRPELERRIRDR 157 A P+Q I++FR E E I R Sbjct: 406 AIEPLQSAIKYFRSEFESGINIR 428
>NUOF_ECOLI (P31979) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) (NUO6) Length = 445 Score = 85.9 bits (211), Expect = 8e-17 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Frame = -3 Query: 561 PGGSSVPLLPK-HICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGG+ L + H+ D+ M+++++ S LGTA M +D ++V + L F+ E Sbjct: 292 PGGAGTDFLTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARE 349 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQ 208 SCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q Sbjct: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 Query: 207 GLIRHFRPELERRIR 163 I++FR E E I+ Sbjct: 410 SAIKYFREEFEAGIK 424
>NUOF_SALTY (P33901) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 445 Score = 85.1 bits (209), Expect = 1e-16 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 2/135 (1%) Frame = -3 Query: 561 PGGSSVPLLPK-HICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHE 385 PGG+ L + H+ D+ M+++++ S LGTA M +D +V + L F+ E Sbjct: 292 PGGAGTDFLTEAHL--DLPMEFESIGKAGSRLGTALAMAVDHEIGMVSLVRNLEEFFARE 349 Query: 384 SCGQCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQI-EGHTICALGDAAAWPVQ 208 SCG CTPCR+G W I+ L+ G + +I+ L+++ + + G T CA A P+Q Sbjct: 350 SCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQ 409 Query: 207 GLIRHFRPELERRIR 163 I++FR E E I+ Sbjct: 410 SAIKYFREEFEAGIK 424
>NUOF_AQUAE (O66841) NADH-quinone oxidoreductase chain F (EC 1.6.99.5) (NADH| dehydrogenase I, chain F) (NDH-1, chain F) Length = 426 Score = 71.6 bits (174), Expect = 2e-12 Identities = 38/115 (33%), Positives = 63/115 (54%) Frame = -3 Query: 516 DVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLW 337 D+ MDY L GT V+V+ + D+V+A +++ FY+HE+CGQCTPCR G Sbjct: 306 DIPMDYSPLGFG----GTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCTPCRVGCYEQA 361 Query: 336 MIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELER 172 ++E++ G A ++ + V + I+ +IC LG A ++ + F E E+ Sbjct: 362 NLLEKIYKGEATEQDWEGFDFVNRNIQPTSICGLGAVAGRLIRQTLEKFPEEWEK 416
>HOXF_RALEU (P22317) NAD-reducing hydrogenase hoxS alpha subunit (EC 1.12.1.2)| Length = 602 Score = 42.0 bits (97), Expect = 0.001 Identities = 29/119 (24%), Positives = 50/119 (42%) Frame = -3 Query: 534 PKHICDDVLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPCRE 355 P C V D + A + A + + D+++ + F+ ESCG C PCR Sbjct: 448 PSGECVSVAKDGERKLAYEDLSCNGAFTIFNCKRDLLEIVRDHMQFFVEESCGICVPCRA 507 Query: 354 GTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPEL 178 G L +E + G A +++D + + + C LG + P+ + F PE+ Sbjct: 508 GNVDLHRKVEWVIAGKACQKDLDDMVSWGALVRRTSRCGLGATSPKPILTTLEKF-PEI 565
>UXUA1_AGRT5 (Q8UAW0) Mannonate dehydratase 1 (EC 4.2.1.8) (D-mannonate| hydrolase 1) Length = 402 Score = 33.1 bits (74), Expect = 0.60 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%) Frame = -3 Query: 342 LWMIMERLK----VGNAKLEE--IDMLQEVTKQIE--GHTICALGDAAAWPVQGLIRHFR 187 L ++E+L+ + +L++ ID L EVT E G ICA GD WP+ GL R Sbjct: 190 LAQLLEKLRSYHGINRGRLQQNLIDFLSEVTPVAEEVGINICAHGDDPPWPLLGLPRILS 249 Query: 186 PELE 175 E + Sbjct: 250 TEAD 253
>DDL_SYNPX (Q7U5Q9) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 353 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/51 (35%), Positives = 22/51 (43%) Frame = -3 Query: 513 VLMDYDALKAVQSGLGTAAVMVMDKSTDVVDAIARLSYFYKHESCGQCTPC 361 V MD A+KA +G G A V + D + AR K G C PC Sbjct: 133 VSMDKQAMKAALAGAGLAQVPYVCAQADELSDAARQEALLKRIESGLCYPC 183
>L2GL2_BRARE (Q7SZE3) Lethal(2) giant larvae protein homolog 2 (Protein penner)| Length = 1020 Score = 30.0 bits (66), Expect = 5.1 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Frame = +1 Query: 37 VSYICMCRNELHQFALFL*IKSANKKWCLCRSCHQQLPIST--------IADPPLQLRSE 192 V Y C+ R ++ A + K + + S ++ +ST + +PPLQ+RS+ Sbjct: 881 VHYPCIRREDVSGIASCVFTKYGQGFYLISPSEFERFSLSTRWVVQPHCLVEPPLQMRSK 940 Query: 193 VPDKTLHRPCCSIPEG 240 P +HR +P+G Sbjct: 941 SPSSPVHR---DLPDG 953
>ADHA_RHIME (O31186) Alcohol dehydrogenase (EC 1.1.1.1)| Length = 340 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -3 Query: 411 RLSYFYKHESCGQCTPCREGTGW 343 R+ + H +CG CTPCR TGW Sbjct: 84 RVGVPWLHTACGCCTPCR--TGW 104
>ATM_ASPOR (Q2U639) Serine/threonine-protein kinase tel1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase tel1) (Telomere length regulation protein 1) (ATM homolog) Length = 2925 Score = 29.3 bits (64), Expect = 8.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 401 YDSLAIASTTSVDLSITITAAVPNPDCTAFSAS*SINTSSHMCFGKRGTDE 553 +DS+ A+T I ++ P+P T F A S+NTS + + +E Sbjct: 1980 FDSMLQAATNLRQWDIPVSPLNPSPPATVFRAFQSLNTSGSLAEASKSINE 2030 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,570,142 Number of Sequences: 219361 Number of extensions: 1817905 Number of successful extensions: 4555 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4543 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
