ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25j16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1US27_HCMVA (P09703) G-protein coupled receptor homolog US27 (HHRF2) 28 9.2

>US27_HCMVA (P09703) G-protein coupled receptor homolog US27 (HHRF2)|
          Length = 362

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 23  LYNIMCMCIYIATDSIHIRACFLEPCWYMNMGIHTFLGT 139
           L N++  C+Y+     ++RAC       +N GI+  +GT
Sbjct: 268 LQNVIIFCLYVGQFLAYVRAC-------LNPGIYILVGT 299


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,816,903
Number of Sequences: 219361
Number of extensions: 273899
Number of successful extensions: 832
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top