ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd25j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 196 1e-47
2emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 180 7e-43
3emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 180 7e-43
4gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 172 2e-40
5emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 170 7e-40
6emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 165 4e-38
7gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, com... 46 0.027
8gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, com... 46 0.027
9ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical prote... 44 0.11
10gb|AC099596.6| Mus musculus chromosome 15, clone RP23-26P23, com... 42 0.42
11emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro... 42 0.42
12emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch... 42 0.42
13emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch... 42 0.42
14gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ... 42 0.42
15emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch... 42 0.42
16gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, c... 40 1.7
17gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, co... 40 1.7
18gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, comp... 40 1.7
19gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's ... 40 1.7
20gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, c... 40 1.7
21gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co... 40 1.7
22gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, co... 40 1.7
23gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete se... 40 1.7
24gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet... 40 1.7
25ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical pro... 40 1.7
26emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 40 1.7
27ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA 40 1.7
28gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105... 40 1.7
29emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 40 1.7
30gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839... 40 1.7
31emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 40 1.7
32gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp... 40 1.7
33gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ... 40 1.7
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
35gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom... 40 1.7
36gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, com... 40 1.7
37emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch... 40 1.7
38dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
39emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr... 40 1.7
40dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 1.7
41gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, comple... 40 1.7
42emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr... 40 1.7
43emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chro... 40 1.7
44emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chrom... 40 1.7
45gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosom... 38 6.6
46gb|AC150542.2| Bos taurus BAC CH240-382E8 (Children's Hospital ... 38 6.6
47gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome... 38 6.6
48gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosom... 38 6.6
49gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, co... 38 6.6
50gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 38 6.6
51gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome... 38 6.6
52gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosom... 38 6.6
53gb|AC120548.15| Mus musculus chromosome 17, clone RP23-211H11, c... 38 6.6
54gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, com... 38 6.6
55gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome... 38 6.6
56gb|AC121971.3| Mus musculus BAC clone RP24-275H22 from chromosom... 38 6.6
57gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 38 6.6
58gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, comple... 38 6.6
59gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, com... 38 6.6
60gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome... 38 6.6
61emb|AL139811.30| Human DNA sequence from clone RP11-75A9 on chro... 38 6.6
62emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chr... 38 6.6
63gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, comp... 38 6.6
64emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BA... 38 6.6
65gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 38 6.6
66emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on ch... 38 6.6
67gb|AC124864.3| Homo sapiens BAC clone RP11-570J4 from 4, complet... 38 6.6
68emb|BX470070.27| Zebrafish DNA sequence from clone CH211-194B21 ... 38 6.6
69gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 38 6.6
70gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, compl... 38 6.6
71gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl... 38 6.6
72gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3... 38 6.6
73dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.6
74gb|AC074270.25|AC074270 Homo sapiens 12 BAC RP11-84G21 (Roswell ... 38 6.6
75gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome... 38 6.6
76gb|AC011241.7| Homo sapiens BAC clone RP11-467P13 from 2, comple... 38 6.6
77gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, co... 38 6.6
78gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome... 38 6.6
79dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome ... 38 6.6
80gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, com... 38 6.6
81dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.6
82emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chr... 38 6.6
83emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on ch... 38 6.6
84emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, ... 38 6.6
85gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cance... 38 6.6
86gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, c... 38 6.6
87gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone... 38 6.6
88gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone... 38 6.6
89gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, co... 38 6.6
90gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome... 38 6.6
91gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete... 38 6.6
92gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, comple... 38 6.6
93emb|CT025622.9| Mouse DNA sequence from clone RP23-443N15 on chr... 38 6.6
94emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 38 6.6
95gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, com... 38 6.6
96dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone... 38 6.6
97gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome... 38 6.6
98emb|AJ488903.1|HCF488903 Heterostegina cf. operculinoides partia... 38 6.6
99emb|AJ488902.1|HDE488902 Heterostegina depressa partial 28S rRNA... 38 6.6
100emb|AJ488901.1|HDE488901 Heterostegina depressa partial 28S rRNA... 38 6.6
101emb|AJ488900.1|HDE488900 Heterostegina depressa partial 28S rRNA... 38 6.6
102emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chr... 38 6.6
103gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 38 6.6
104emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chro... 38 6.6
105emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chr... 38 6.6
106emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chro... 38 6.6 
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  196 bits (99), Expect = 1e-47
 Identities = 126/131 (96%), Gaps = 3/131 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   catattacatagtacgacagtattgtataatattatgtgcatgtgcatatacatagccac 60
           ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 772 catattacatagt-cgacag-attgtataatattatgtgcatgtgcatatacatagccac 715

                                                                       
Query: 61  cgatagcattcacatacgagcatgctttctcgagccatgttggtacatgaacatgggcat 120
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |
Sbjct: 714 cgatagcattcacatacgagcatgctttctcgag-catgttggtacatgaacatgggact 656

                      
Query: 121 acacacatttt 131
           |||||||||||
Sbjct: 655 acacacatttt 645
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  180 bits (91), Expect = 7e-43
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 21  tattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacatacgag 80
           ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 731

                                                                      
Query: 81  catgctttctcgagccatgttggtacatgaacatgggcatacacacatttttaggaaca 139
           |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 730 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaaca 672
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>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  180 bits (91), Expect = 7e-43
 Identities = 112/119 (94%)
 Strand = Plus / Minus

                                                                       
Query: 21  tattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacatacgag 80
           ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 771

                                                                      
Query: 81  catgctttctcgagccatgttggtacatgaacatgggcatacacacatttttaggaaca 139
           |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 770 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaaca 712
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  172 bits (87), Expect = 2e-40
 Identities = 111/119 (93%)
 Strand = Plus / Minus

                                                                       
Query: 21  tattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacatacgag 80
           ||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacatacgag 224

                                                                      
Query: 81  catgctttctcgagccatgttggtacatgaacatgggcatacacacatttttaggaaca 139
           ||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||
Sbjct: 223 catgctttctcgagccatgttcgtacatgaacatggacatacacatattcttaggaaca 165
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  170 bits (86), Expect = 7e-40
 Identities = 104/110 (94%)
 Strand = Plus / Minus

                                                                       
Query: 30  atattatgtgcatgtgcatatacatagccaccgatagcattcacatacgagcatgctttc 89
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 549 atattatgtgcatgtgcatatacatagccaccgattgcattcacatacgagcacgctttc 490

                                                             
Query: 90  tcgagccatgttggtacatgaacatgggcatacacacatttttaggaaca 139
           ||||||||||||| ||||||||||||| |||||||| ||| |||||||||
Sbjct: 489 tcgagccatgttgttacatgaacatggacatacacatattcttaggaaca 440
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  165 bits (83), Expect = 4e-38
 Identities = 110/119 (92%)
 Strand = Plus / Minus

                                                                       
Query: 21  tattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacatacgag 80
           ||||||||||||||||| |   || |||||||||||||||||||||||||| ||||||||
Sbjct: 709 tattgtataatattatgcgtccgttcatatacatagccaccgatagcattctcatacgag 650

                                                                      
Query: 81  catgctttctcgagccatgttggtacatgaacatgggcatacacacatttttaggaaca 139
           |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 649 catgctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaaca 591
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>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence
          Length = 183087

 Score = 46.1 bits (23), Expect = 0.027
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 32    attatgtgcatgtgcatatacat 54
             |||||||||||||||||||||||
Sbjct: 10353 attatgtgcatgtgcatatacat 10375
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>gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, complete sequence
          Length = 229522

 Score = 46.1 bits (23), Expect = 0.027
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 32    attatgtgcatgtgcatatacat 54
             |||||||||||||||||||||||
Sbjct: 27510 attatgtgcatgtgcatatacat 27488
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>ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403997.00.0)
           partial mRNA
          Length = 210

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 35  atgtgcatgtgcatatacatag 56
           ||||||||||||||||||||||
Sbjct: 145 atgtgcatgtgcatatacatag 124
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>gb|AC099596.6| Mus musculus chromosome 15, clone RP23-26P23, complete sequence
          Length = 210022

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     cagtattgtataatattatgtgcat 42
              ||||||||||||||||| |||||||
Sbjct: 110888 cagtattgtataatattttgtgcat 110912
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>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete
             sequence
          Length = 196093

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    tatgtgcatgtgcatatacat 54
             |||||||||||||||||||||
Sbjct: 29098 tatgtgcatgtgcatatacat 29118
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>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 169841

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 111   acatgggcatacacacatttttagg 135
             ||||||||||||| |||||||||||
Sbjct: 10408 acatgggcatacatacatttttagg 10432
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>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete
             sequence
          Length = 129800

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ttatgtgcatgtgcatataca 53
             |||||||||||||||||||||
Sbjct: 47010 ttatgtgcatgtgcatataca 46990
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>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence
          Length = 215189

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    tatgtgcatgtgcatatacat 54
             |||||||||||||||||||||
Sbjct: 62620 tatgtgcatgtgcatatacat 62600
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>emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on chromosome 11, complete
             sequence
          Length = 200602

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    tatgtgcatgtgcatatacat 54
             |||||||||||||||||||||
Sbjct: 18429 tatgtgcatgtgcatatacat 18449
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>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence
          Length = 177038

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   tgtgcatgtgcatatacata 55
            ||||||||||||||||||||
Sbjct: 6860 tgtgcatgtgcatatacata 6841
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>gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, complete sequence
          Length = 158041

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tattatgtgcatgtgcatat 50
              ||||||||||||||||||||
Sbjct: 142505 tattatgtgcatgtgcatat 142486
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>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence
          Length = 195286

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    tacatgaacatgggcatacacaca 127
              |||||||||||| |||||||||||
Sbjct: 130026 tacatgaacatgtgcatacacaca 130049
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>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 234420

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    acatgaacatgggcatacac 124
              ||||||||||||||||||||
Sbjct: 133471 acatgaacatgggcatacac 133452
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>gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, complete sequence
          Length = 142742

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   atattatgtgcatgtgcata 49
            ||||||||||||||||||||
Sbjct: 3330 atattatgtgcatgtgcata 3311
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>gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, complete sequence
          Length = 162329

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tgtgcatgtgcatatacata 55
              ||||||||||||||||||||
Sbjct: 160584 tgtgcatgtgcatatacata 160565
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>gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, complete sequence
          Length = 194834

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    catgtgcatatacatagcca 59
             ||||||||||||||||||||
Sbjct: 72461 catgtgcatatacatagcca 72480
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>gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete sequence
          Length = 159689

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     atgtgcatgtgcatatacat 54
              ||||||||||||||||||||
Sbjct: 108587 atgtgcatgtgcatatacat 108568
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>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 105    acatgaacatgggcatacacacattttt 132
              |||||||||||  |||||||||||||||
Sbjct: 184580 acatgaacatgcacatacacacattttt 184553
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>ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical protein
          (PB103469.00.0) partial mRNA
          Length = 111

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 24 tgtataatattatgtgcatg 43
          ||||||||||||||||||||
Sbjct: 10 tgtataatattatgtgcatg 29
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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   tgggcatacacacattttta 133
             ||||||||||||||||||||
Sbjct: 27477 tgggcatacacacattttta 27496
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>ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  acatacgagcatgctttctc 91
           ||||||||||||||||||||
Sbjct: 722 acatacgagcatgctttctc 703
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>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence
          Length = 222520

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    acatgaacatgggcatacacacat 128
              ||||||||||||||||||| ||||
Sbjct: 217582 acatgaacatgggcatacatacat 217605
to top
>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
              complete sequence
          Length = 155592

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    gtacatgaacatgggcatacacac 126
              |||||||||||||| |||||||||
Sbjct: 152158 gtacatgaacatggacatacacac 152135
to top
>gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839 IMAGE:6902520),
           complete cds
          Length = 1054

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  acatacgagcatgctttctc 91
           ||||||||||||||||||||
Sbjct: 722 acatacgagcatgctttctc 703
to top
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
             complete sequence
          Length = 92059

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    gtgcatgtgcatatacatag 56
             ||||||||||||||||||||
Sbjct: 88573 gtgcatgtgcatatacatag 88554
to top
>gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   acatgggcatacacacatttttag 134
             ||||||||||||||||| ||||||
Sbjct: 61720 acatgggcatacacacaattttag 61697
to top
>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence
          Length = 244730

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     atgtgcatgtgcatatacat 54
              ||||||||||||||||||||
Sbjct: 227943 atgtgcatgtgcatatacat 227962
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 112      catgggcatacacacatttttagg 135
                |||||||||| |||||||||||||
Sbjct: 28187903 catgggcatagacacatttttagg 28187926
to top
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete
             sequence
          Length = 182748

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   acatgaacatgggcatacacacat 128
             ||||||||||||||||||| ||||
Sbjct: 82489 acatgaacatgggcatacatacat 82512
to top
>gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, complete sequence
          Length = 180185

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     tattatgtgcatgtgcatat 50
              ||||||||||||||||||||
Sbjct: 147408 tattatgtgcatgtgcatat 147427
to top
>emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on chromosome 4, complete
            sequence
          Length = 168795

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   tgtgcatgtgcatatacata 55
            ||||||||||||||||||||
Sbjct: 8750 tgtgcatgtgcatatacata 8731
to top
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 112    catgggcatacacacatttttagg 135
              |||||||||| |||||||||||||
Sbjct: 177550 catgggcatagacacatttttagg 177573
to top
>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete
             sequence
          Length = 170444

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    atattatgtgcatgtgcata 49
             ||||||||||||||||||||
Sbjct: 16112 atattatgtgcatgtgcata 16131
to top
>dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-693N9, complete
             sequence
          Length = 172081

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    gtataatattatgtgcatgt 44
             ||||||||||||||||||||
Sbjct: 79371 gtataatattatgtgcatgt 79352
to top
>gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, complete sequence
          Length = 218218

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tgtgcatgtgcatatacata 55
              ||||||||||||||||||||
Sbjct: 114789 tgtgcatgtgcatatacata 114770
to top
>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete
              sequence
          Length = 203030

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tatgtgcatgtgcatataca 53
              ||||||||||||||||||||
Sbjct: 166207 tatgtgcatgtgcatataca 166188
to top
>emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chromosome 4, complete
             sequence
          Length = 183630

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtgcatgtgcatatacata 55
             ||||||||||||||||||||
Sbjct: 55361 tgtgcatgtgcatatacata 55380
to top
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete
            sequence
          Length = 218939

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   tatgtgcatgtgcatataca 53
            ||||||||||||||||||||
Sbjct: 6268 tatgtgcatgtgcatataca 6249
to top
>gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosome 17, complete sequence
          Length = 180635

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tgtgcatgtgcatatacat 54
              |||||||||||||||||||
Sbjct: 119973 tgtgcatgtgcatatacat 119991
to top
>gb|AC150542.2| Bos taurus  BAC CH240-382E8 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 191058

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    tatgtgcatgtgcatatacatag 56
             ||||||||||| |||||||||||
Sbjct: 27892 tatgtgcatgtccatatacatag 27870
to top
>gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome 17, complete sequence
          Length = 170928

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     tgtgcatgtgcatatacat 54
              |||||||||||||||||||
Sbjct: 136651 tgtgcatgtgcatatacat 136633
to top
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete
             sequence
          Length = 162143

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    taatattatgtgcatgtgc 46
             |||||||||||||||||||
Sbjct: 76865 taatattatgtgcatgtgc 76883
to top
>gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, complete sequence
          Length = 201822

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttatgtgcatgtgcatata 51
             |||||||||||||||||||
Sbjct: 65819 ttatgtgcatgtgcatata 65837
to top
>gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-434H17, complete
             sequence
          Length = 161421

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    atgtgcatgtgcatataca 53
             |||||||||||||||||||
Sbjct: 96818 atgtgcatgtgcatataca 96836
to top
>gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome 1, complete sequence
          Length = 173764

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 53798 tgtgcatgtgcatatacat 53780
to top
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete
             sequence
          Length = 182085

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 67    cattcacatacgagcatgc 85
             |||||||||||||||||||
Sbjct: 92524 cattcacatacgagcatgc 92506
to top
>gb|AC120548.15| Mus musculus chromosome 17, clone RP23-211H11, complete sequence
          Length = 198829

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     atgtgcatgtgcatataca 53
              |||||||||||||||||||
Sbjct: 110159 atgtgcatgtgcatataca 110141
to top
>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 44524 tgtgcatgtgcatatacat 44506
to top
>gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome 8, complete sequence
          Length = 156593

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 34     tatgtgcatgtgcatatacatag 56
              |||||||||||||||||| ||||
Sbjct: 105188 tatgtgcatgtgcatatagatag 105166
to top
>gb|AC121971.3| Mus musculus BAC clone RP24-275H22 from chromosome 7, complete sequence
          Length = 195611

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    atgtgcatgtgcatataca 53
             |||||||||||||||||||
Sbjct: 54741 atgtgcatgtgcatataca 54759
to top
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    acatgggcatacacacatt 129
              |||||||||||||||||||
Sbjct: 100255 acatgggcatacacacatt 100273
to top
>gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, complete sequence
          Length = 179858

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 33     ttatgtgcatgtgcatatacata 55
              ||||||| |||||||||||||||
Sbjct: 109145 ttatgtgtatgtgcatatacata 109123
to top
>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence
          Length = 230139

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 34     tatgtgcatgtgcatatacatag 56
              |||||||||||||||||| ||||
Sbjct: 211826 tatgtgcatgtgcatatagatag 211804
to top
>gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome 1, complete sequence
          Length = 182270

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 13026 tgtgcatgtgcatatacat 13044
to top
>emb|AL139811.30| Human DNA sequence from clone RP11-75A9 on chromosome Xp11.23-11.4
             Contains a catenin, beta like 1 (NAP, P14L, C20orf33,
             FLJ21108, NYD-SP19) (CTNNBL1) pseudogene, a
             glyceraldehyde-3-phosphate dehydrogenase (G3PD, GAPDH)
             (GAPD) pseudogene, a transmembrane protein vezatin
             pseudogene, a novel gene (FLJ20344) and two CpG islands,
             complete sequence
          Length = 141469

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 98575 tgtgcatgtgcatatacat 98557
to top
>emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chromosome 6 Contains the
             IL20RA gene for interleukin 20 receptor alpha, a novel
             gene, the 5' part of a novel gene and a CpG island,
             complete sequence
          Length = 152228

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 83495 tgtgcatgtgcatatacat 83513
to top
>gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, complete sequence
          Length = 211779

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     caccgatagcattcacata 76
              |||||||||||||||||||
Sbjct: 192296 caccgatagcattcacata 192314
to top
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1
          Length = 111122

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 26    tataatattatgtgcatgtgcatatac 52
             |||||||| ||||||||||| ||||||
Sbjct: 88786 tataatatgatgtgcatgtgaatatac 88812
to top
>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    atattatgtgcatgtgcat 48
             |||||||||||||||||||
Sbjct: 63261 atattatgtgcatgtgcat 63279
to top
>emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on chromosome 13 Contains the
              gene for a novel protein similar to myosin, light
              polypeptide kinase 2 Mylk2, a novel gene, the Wrnip gene
              for Werner syndrome homolog (human) interacting protein,
              the Serpinb1a gene for serine (or cysteine) proteinase
              inhibitor clade B (ovalbumin) member 1a, a Serpinb1
              pseudogene and a CpG island, complete sequence
          Length = 190673

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     tatgtgcatgtgcatatac 52
              |||||||||||||||||||
Sbjct: 130685 tatgtgcatgtgcatatac 130703
to top
>gb|AC124864.3| Homo sapiens BAC clone RP11-570J4 from 4, complete sequence
          Length = 166797

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 105   acatgaacatgggcatacacaca 127
             ||||||||| |||||||||||||
Sbjct: 65149 acatgaacacgggcatacacaca 65171
to top
>emb|BX470070.27| Zebrafish DNA sequence from clone CH211-194B21 in linkage group 15,
              complete sequence
          Length = 228177

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     acagtattgtataatatta 35
              |||||||||||||||||||
Sbjct: 108765 acagtattgtataatatta 108747
to top
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   atgaacatgggcatacaca 125
             |||||||||||||||||||
Sbjct: 31202 atgaacatgggcatacaca 31220
to top
>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence
          Length = 193989

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 105    acatgaacatgggcatacacaca 127
              ||||| |||||||||||||||||
Sbjct: 161840 acatgcacatgggcatacacaca 161862
to top
>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence
          Length = 87338

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    ttatgtgcatgtgcatatacata 55
             ||||||| |||||||||||||||
Sbjct: 23915 ttatgtgtatgtgcatatacata 23937
to top
>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence
          Length = 123238

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    ttatgtgcatgtgcatatacata 55
             ||||||| |||||||||||||||
Sbjct: 31472 ttatgtgtatgtgcatatacata 31450
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     atgtgcatgtgcatataca 53
              |||||||||||||||||||
Sbjct: 130433 atgtgcatgtgcatataca 130451
to top
>gb|AC074270.25|AC074270 Homo sapiens 12 BAC RP11-84G21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 140597

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 89321 tgtgcatgtgcatatacat 89339
to top
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence
          Length = 179606

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 105   acatgaacatgggcatacacaca 127
             ||||||||||||||| |||||||
Sbjct: 82839 acatgaacatgggcacacacaca 82817
to top
>gb|AC011241.7| Homo sapiens BAC clone RP11-467P13 from 2, complete sequence
          Length = 104891

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 92257 tgtgcatgtgcatatacat 92239
to top
>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence
          Length = 186744

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    ttatgtgcatgtgcatata 51
             |||||||||||||||||||
Sbjct: 37559 ttatgtgcatgtgcatata 37541
to top
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence
          Length = 167400

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tgtataatattatgtgcat 42
             |||||||||||||||||||
Sbjct: 60050 tgtataatattatgtgcat 60032
to top
>dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-275M02,
             complete sequence
          Length = 165943

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    ttatgtgcatgtgcatatacata 55
             |||||||||||||||||| ||||
Sbjct: 69336 ttatgtgcatgtgcatatgcata 69314
to top
>gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, complete sequence
          Length = 191154

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     caccgatagcattcacata 76
              |||||||||||||||||||
Sbjct: 109467 caccgatagcattcacata 109449
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     atgtgcatgtgcatataca 53
              |||||||||||||||||||
Sbjct: 129732 atgtgcatgtgcatataca 129750
to top
>emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chromosome 2, complete
              sequence
          Length = 216639

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     gtgcatgtgcatatacata 55
              |||||||||||||||||||
Sbjct: 211570 gtgcatgtgcatatacata 211588
to top
>emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on chromosome 2, complete
             sequence
          Length = 170293

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    gtgcatgtgcatatacata 55
             |||||||||||||||||||
Sbjct: 97702 gtgcatgtgcatatacata 97720
to top
>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence
          Length = 185849

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     tgtgcatatacatagccac 60
              |||||||||||||||||||
Sbjct: 111905 tgtgcatatacatagccac 111887
to top
>gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 125205

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    attatgtgcatgtgcatat 50
             |||||||||||||||||||
Sbjct: 86259 attatgtgcatgtgcatat 86241
to top
>gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, complete sequence
          Length = 190594

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    ttatgtgcatgtgcatata 51
             |||||||||||||||||||
Sbjct: 29447 ttatgtgcatgtgcatata 29429
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>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete
              sequence
          Length = 171451

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 28     taatattatgtgcatgtgcatat 50
              |||| ||||||||||||||||||
Sbjct: 115964 taattttatgtgcatgtgcatat 115986
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>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete
             sequence
          Length = 216807

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 28    taatattatgtgcatgtgcatat 50
             |||| ||||||||||||||||||
Sbjct: 61409 taattttatgtgcatgtgcatat 61431
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>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 34   tatgtgcatgtgcatatacatag 56
            |||||||||||||||||| ||||
Sbjct: 7949 tatgtgcatgtgcatatagatag 7927
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>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence
          Length = 207210

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tgtgcatgtgcatatacat 54
              |||||||||||||||||||
Sbjct: 172748 tgtgcatgtgcatatacat 172766
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>gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete sequence
          Length = 188376

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tgtgcatgtgcatatacat 54
              |||||||||||||||||||
Sbjct: 175886 tgtgcatgtgcatatacat 175904
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>gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, complete sequence
          Length = 212119

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 105    acatgaacatgggcatacacaca 127
              ||||| |||||||||||||||||
Sbjct: 126753 acatgcacatgggcatacacaca 126731
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>emb|CT025622.9| Mouse DNA sequence from clone RP23-443N15 on chromosome 17, complete
              sequence
          Length = 161938

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     atgtgcatgtgcatataca 53
              |||||||||||||||||||
Sbjct: 123439 atgtgcatgtgcatataca 123457
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 17     acagtattgtataatattatgtg 39
              ||||||||||||||||| |||||
Sbjct: 305659 acagtattgtataatataatgtg 305637
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>gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, complete sequence
          Length = 193425

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 105   acatgaacatgggcatacacaca 127
             ||||| |||||||||||||||||
Sbjct: 46983 acatgcacatgggcatacacaca 47005
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>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190,
             complete sequence
          Length = 125299

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    gtattgtataatattatgt 38
             |||||||||||||||||||
Sbjct: 25332 gtattgtataatattatgt 25314
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>gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome 9, complete sequence
          Length = 170322

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    tgtgcatgtgcatatacat 54
             |||||||||||||||||||
Sbjct: 81529 tgtgcatgtgcatatacat 81547
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>emb|AJ488903.1|HCF488903 Heterostegina cf. operculinoides partial 28S rRNA gene, isolate 377
          Length = 492

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  tgcatgtgcatatacatag 56
           |||||||||||||||||||
Sbjct: 423 tgcatgtgcatatacatag 405
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>emb|AJ488902.1|HDE488902 Heterostegina depressa partial 28S rRNA gene, isolate 282
          Length = 495

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  tgcatgtgcatatacatag 56
           |||||||||||||||||||
Sbjct: 426 tgcatgtgcatatacatag 408
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>emb|AJ488901.1|HDE488901 Heterostegina depressa partial 28S rRNA gene, isolate 308
          Length = 486

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  tgcatgtgcatatacatag 56
           |||||||||||||||||||
Sbjct: 417 tgcatgtgcatatacatag 399
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>emb|AJ488900.1|HDE488900 Heterostegina depressa partial 28S rRNA gene, isolate 642
          Length = 486

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  tgcatgtgcatatacatag 56
           |||||||||||||||||||
Sbjct: 417 tgcatgtgcatatacatag 399
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>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete
             sequence
          Length = 186882

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 109   gaacatgggcatacacaca 127
             |||||||||||||||||||
Sbjct: 79545 gaacatgggcatacacaca 79527
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>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    acatgggcatacacacatt 129
              |||||||||||||||||||
Sbjct: 223699 acatgggcatacacacatt 223717
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>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete
              sequence
          Length = 232070

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tgtgcatgtgcatatacat 54
              |||||||||||||||||||
Sbjct: 141634 tgtgcatgtgcatatacat 141652
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>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete
              sequence
          Length = 207922

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     ttatgtgcatgtgcatata 51
              |||||||||||||||||||
Sbjct: 191067 ttatgtgcatgtgcatata 191049
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>emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chromosome 2, complete
             sequence
          Length = 123627

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 109   gaacatgggcatacacaca 127
             |||||||||||||||||||
Sbjct: 27749 gaacatgggcatacacaca 27767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,443,956
Number of Sequences: 3902068
Number of extensions: 1443956
Number of successful extensions: 114894
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114509
Number of HSP's gapped (non-prelim): 382
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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