| Clone Name | rbasd25i08 |
|---|---|
| Clone Library Name | barley_pub |
>ODPB_MYCPN (P75391) Pyruvate dehydrogenase E1 component subunit beta (EC| 1.2.4.1) Length = 327 Score = 30.8 bits (68), Expect = 2.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -1 Query: 479 PLANARWGNYAFSAAFGGLFPMLSFQMHGFPDPAAY 372 P+A A AA GGL P++ Q GF PA + Sbjct: 60 PIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMF 95
>TNR8_RAT (P97525) Tumor necrosis factor receptor superfamily member 8| precursor (CD30L receptor) (Lymphocyte activation antigen CD30) Length = 493 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +2 Query: 38 QRSQNLDHPNLDRYRNSMDTPYIQTEIQTEQNLYQTPPQFDDSISSNRFTPRGGLQSREP 217 QRS ++ + + + P ++T +T P DDSI+ N F PR + EP Sbjct: 345 QRSGSVTDSSAGHTLSPLSPPAVETGASVGTACLETLPLLDDSITGNSFAPR---EPPEP 401 Query: 218 R 220 R Sbjct: 402 R 402
>HXK1_BOVIN (P27595) Hexokinase-1 (EC 2.7.1.1) (Hexokinase type I) (HK I)| (Brain form hexokinase) Length = 918 Score = 30.4 bits (67), Expect = 2.7 Identities = 11/30 (36%), Positives = 22/30 (73%) Frame = +2 Query: 68 LDRYRNSMDTPYIQTEIQTEQNLYQTPPQF 157 L+R R++ TP ++T ++ + +LY+T PQ+ Sbjct: 394 LNRLRDNKSTPRLRTTVRVDGSLYKTHPQY 423
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -2 Query: 475 WRMHGGATMRSRPHSGACSPCSASKCMGFQIQPHMPSRLG 356 W + ++ PHSGA S CSA +G + +P G Sbjct: 2234 WTLEPWPSLPVTPHSGALSLCSADTSLGDRADTSLPQTQG 2273
>HXK1_HUMAN (P19367) Hexokinase-1 (EC 2.7.1.1) (Hexokinase type I) (HK I)| (Brain form hexokinase) Length = 917 Score = 28.9 bits (63), Expect = 7.8 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = +2 Query: 68 LDRYRNSMDTPYIQTEIQTEQNLYQTPPQF 157 L+R R++ TP ++T + + +LY+T PQ+ Sbjct: 394 LNRLRDNKGTPRLRTTVGVDGSLYKTHPQY 423
>ARSF_HUMAN (P54793) Arylsulfatase F precursor (EC 3.1.6.-) (ASF)| Length = 590 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/41 (34%), Positives = 18/41 (43%) Frame = -2 Query: 481 SRWRMHGGATMRSRPHSGACSPCSASKCMGFQIQPHMPSRL 359 S W+ H + P SG C S +C G Q+ H P L Sbjct: 466 SVWKAHYVTPVFQPPASGGCYVTSLCRCFGEQVTYHNPPLL 506
>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)| Length = 877 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 2/59 (3%) Frame = +2 Query: 17 VHTVLSNQRSQNLDHPNLDRYRNSMDTPYIQTEI--QTEQNLYQTPPQFDDSISSNRFT 187 +H L+ +R L HP+ + + TPY+Q + Q ++ T P D + T Sbjct: 243 IHQALAAERKFFLSHPSYRHMADRLGTPYLQRVLNQQLTNHIRDTLPGLRDKLQKQMLT 301 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,569,450 Number of Sequences: 219361 Number of extensions: 1444721 Number of successful extensions: 3731 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3543 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3707 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)