ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd25h13 |
|---|---|
| Clone Library Name | barley_pub |
>ASNS_ASPOF (P31752) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (AS) Length = 589 Score = 214 bits (545), Expect = 1e-55 Identities = 106/143 (74%), Positives = 117/143 (81%), Gaps = 6/143 (4%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG KAH +VTD+MM NA IYPHNTPTTKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAG-- 197 NSA TVPGGPS+ACSTAKA+EWDARWS NLDPSGRAALGVH SAY+ LP++I AG Sbjct: 508 NSARFTVPGGPSIACSTAKAIEWDARWSNNLDPSGRAALGVHDSAYDPP-LPSSISAGKG 566 Query: 196 ----TSKKPRMIKVAAPGVAIES 140 T+KKPR++ VA PGV I + Sbjct: 567 AAMITNKKPRIVDVATPGVVIST 589
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 192 bits (488), Expect = 5e-49 Identities = 96/139 (69%), Positives = 107/139 (76%), Gaps = 2/139 (1%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG K H NV DKMMSNA I+PHNTP TKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATI--MAG 197 NSA LTVPGG +VACSTAKAVEWDA WS N+DPSGRAA+GVHLSAY+ +++ TI + Sbjct: 508 NSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYDGKNVALTIPPLKA 567 Query: 196 TSKKPRMIKVAAPGVAIES 140 P M+ GV I+S Sbjct: 568 IDNMPMMM---GQGVVIQS 583
>ASNS1_PEA (P19251) Asparagine synthetase, nodule [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 585 Score = 191 bits (485), Expect = 1e-48 Identities = 95/137 (69%), Positives = 104/137 (75%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGY WIDG K H +VTD+MM NA I+P NTP TKEAY YRMIFERFFPQ Sbjct: 449 QKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQ 508 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTS 191 NSA LTVPGGPSVACST KA+EWDA WS NLDPSGRAALGVH+SAYE + P T Sbjct: 509 NSARLTVPGGPSVACSTEKAIEWDASWSNNLDPSGRAALGVHVSAYEHQINPVTKGVEPE 568 Query: 190 KKPRMIKVAAPGVAIES 140 K I V+ GVAI++ Sbjct: 569 KIIPKIGVSPLGVAIQT 585
>ASNS_BRAOL (P49091) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 191 bits (484), Expect = 2e-48 Identities = 89/107 (83%), Positives = 94/107 (87%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG KAH NV DKMMS A FI+PHNTP TKEAY YRMIFERFFPQ Sbjct: 449 QKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQ 508 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYE 230 NSA LTVPGG +VACSTAKAVEWDA WS N+DPSGRAA+GVHLSAY+ Sbjct: 509 NSARLTVPGGATVACSTAKAVEWDASWSNNMDPSGRAAIGVHLSAYD 555
>ASNS2_PEA (P19252) Asparagine synthetase, root [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 582 Score = 190 bits (483), Expect = 2e-48 Identities = 91/110 (82%), Positives = 95/110 (86%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG KAH +VTDKMM NA I+PHNTP TKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEH 221 NSA LTVPGGP+VACSTAKAVEWDA WS NLDPSGRAALGVH SAYE + Sbjct: 508 NSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHDSAYENHN 557
>ASNS_TRIVS (O24661) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 187 bits (474), Expect = 2e-47 Identities = 95/129 (73%), Positives = 100/129 (77%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG KAH E +VTDKMM NA I+PHNTPTTKE Y YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTS 191 NSA LTVPGGPSVACSTA AV WDA WS NLDPSGRAA GVH AYE H+P G Sbjct: 508 NSAKLTVPGGPSVACSTATAVAWDASWSKNLDPSGRAATGVHDLAYE-NHVP----IGNL 562 Query: 190 KKPRMIKVA 164 K +M V+ Sbjct: 563 KSKKMDSVS 571
>ASNS1_LOTJA (P49092) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 585 Score = 185 bits (470), Expect = 6e-47 Identities = 97/139 (69%), Positives = 107/139 (76%), Gaps = 2/139 (1%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG K H +VTDKM+ NA I+ HNTP TKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTS 191 NSA LTVPGGP+VACSTAKAVEWDA WS NLDPSGRAALGVHLSAY+ + I Sbjct: 508 NSARLTVPGGPTVACSTAKAVEWDAAWSNNLDPSGRAALGVHLSAYDDKQ-NNLINNKPV 566 Query: 190 KKPRMIKVAAP--GVAIES 140 + ++I + AP GVAI S Sbjct: 567 EFEKLIPMEAPSLGVAIHS 585
>ASNS2_LOTJA (P49093) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 585 Score = 181 bits (458), Expect = 2e-45 Identities = 94/140 (67%), Positives = 106/140 (75%), Gaps = 3/140 (2%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGY WIDG K H +VTDKMM NA IYP NTP TKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYEQEHLPATIMAGTS 191 NSA L+VPGG S+ACST KA+EWDA WS NLDPSGRAALGVH SAY+ + L ++ G Sbjct: 508 NSARLSVPGGASIACSTEKAIEWDAAWSNNLDPSGRAALGVHDSAYD-DQLNKSVSKGVE 566 Query: 190 KK---PRMIKVAAPGVAIES 140 + P+M +V+ GVAI S Sbjct: 567 PEKIIPKM-EVSPLGVAILS 585
>ASNS_ORYSA (Q43011) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 590 Score = 180 bits (457), Expect = 2e-45 Identities = 84/107 (78%), Positives = 91/107 (85%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG K H +V+D MM NA F+YP NTP TKEAY YR IFE+FFP+ Sbjct: 448 QKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPK 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYE 230 N+A LTVPGGPSVACSTAKAVEWDA WS NLDPSGRAALGVH +AYE Sbjct: 508 NAARLTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYE 554
>ASNS_MAIZE (P49094) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 585 Score = 140 bits (353), Expect = 2e-33 Identities = 64/96 (66%), Positives = 76/96 (79%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGY+WIDG K+ TE VTD+MM+NA ++P+NTP KEAY YRMIFER FPQ Sbjct: 448 QKEQFSDGVGYNWIDGLKSFTEQQVTDEMMNNAAQMFPYNTPVNKEAYYYRMIFERLFPQ 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 +SA TVP GPS+ACST A+EW +W + DPSGR Sbjct: 508 DSARETVPWGPSIACSTPAAIEWVEQWKASNDPSGR 543
>ASNB_ECOLI (P22106) Asparagine synthetase B [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 553 Score = 133 bits (335), Expect = 3e-31 Identities = 66/107 (61%), Positives = 78/107 (72%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWID K V+D+ + A+F +P+NTPT+KEAY YR IFE FP Sbjct: 448 QKEQFSDGVGYSWIDTLKEVAAQQVSDQQLETARFRFPYNTPTSKEAYLYREIFEELFPL 507 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSAYE 230 SA VPGGPSVACS+AKA+EWD + DPSGR A+GVH SAY+ Sbjct: 508 PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGR-AVGVHQSAYK 553
>ASNS_SANAU (O24338) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 524 Score = 110 bits (275), Expect = 3e-24 Identities = 51/60 (85%), Positives = 53/60 (88%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG KAH+ +VTDKMM NA IYPHNTPTTKEAY YRMIFERFFPQ Sbjct: 448 QKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 507
>ASNS2_YEAST (P49090) Asparagine synthetase [glutamine-hydrolyzing] 2 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 2) Length = 571 Score = 81.3 bits (199), Expect = 2e-15 Identities = 46/100 (46%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG + E ++D M +N K + + PTTKEAY YR+ F+ +FPQ Sbjct: 476 QKEQFSDGVGYSWIDGLRDTAERAISDAMFANPKADWGDDIPTTKEAYWYRLKFDAWFPQ 535 Query: 370 NSAILTVPGGPSVACSTAKAVEW--DARWSGNLDPSGRAA 257 +A TV + W A W DPSGR A Sbjct: 536 KTAADTV-------------MRWIPKADWGCAEDPSGRYA 562
>ASNS1_YEAST (P49089) Asparagine synthetase [glutamine-hydrolyzing] 1 (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase 1) Length = 571 Score = 78.2 bits (191), Expect = 1e-14 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWIDG K E+ ++D+M ++ K + + PTTKEA+ YR+ F+ FPQ Sbjct: 477 QKEQFSDGVGYSWIDGLKDTAEAVISDEMFASPKAEWGSDIPTTKEAFWYRLKFDALFPQ 536 Query: 370 NSAILTVPGGPSVACSTAKAVEW--DARWSGNLDPSGRAA 257 + TV + W A W DPSGR A Sbjct: 537 KTVADTV-------------MRWIPKADWGCAEDPSGRYA 563
>ASNS_SCHPO (P78753) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 556 Score = 68.6 bits (166), Expect = 1e-11 Identities = 41/105 (39%), Positives = 54/105 (51%) Frame = -1 Query: 550 QKEQFSDGVGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFFPQ 371 QKEQFSDGVGYSWID K E ++D + + + + PTTKEA+ YR +F+ FP+ Sbjct: 463 QKEQFSDGVGYSWIDALKDTAELCISDDEFALPRREWGDDIPTTKEAFWYRKLFDEIFPR 522 Query: 370 NSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGRAALGVHLSA 236 A + P A W DPSGR G H++A Sbjct: 523 QCADTVMRWVPK------------AEWGCPEDPSGRYQAG-HVAA 554
>ASNS_MOUSE (Q61024) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 61.6 bits (148), Expect = 1e-09 Identities = 39/98 (39%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + + E V D+MMS A +P NTP TKE Y YR IFER + Sbjct: 466 KEAFSDGITSVKNSWFKILQDYVEHQVDDEMMSAASQKFPFNTPKTKEGYFYRQIFERHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + LT W +W DPS R Sbjct: 526 PGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_PONPY (Q5R6W9) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 60.8 bits (146), Expect = 2e-09 Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + + E V D MM+NA +P NTP TKE Y YR +FER + Sbjct: 466 KEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + L + W +W DPS R Sbjct: 526 PGRADWL--------------SHYWMPKWINATDPSAR 549
>ASNS_HUMAN (P08243) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) (Cell cycle control protein TS11) Length = 560 Score = 60.8 bits (146), Expect = 2e-09 Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + + E V D MM+NA +P NTP TKE Y YR +FER + Sbjct: 466 KEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQKFPFNTPKTKEGYYYRQVFERHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + L + W +W DPS R Sbjct: 526 PGRADWL--------------SHYWMPKWINATDPSAR 549
>ASNS_CRIGR (P19891) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 60.8 bits (146), Expect = 2e-09 Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + + E V D+MM+ A +P NTP TKE Y YR IFER + Sbjct: 466 KEAFSDGITSVKNSWFKILQDYVEHQVDDEMMATAAQKFPFNTPKTKEGYYYRQIFERHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + LT W +W DPS R Sbjct: 526 PGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_RAT (P49088) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 58.5 bits (140), Expect = 1e-08 Identities = 38/98 (38%), Positives = 43/98 (43%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + E V D MMS A +P NTP TKE Y YR IFE + Sbjct: 466 KEAFSDGITSVKNSWFKILQDFVEHQVDDAMMSEASQKFPFNTPQTKEGYYYRQIFEHHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + LT W +W DPS R Sbjct: 526 PGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_MESAU (P17714) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 58.2 bits (139), Expect = 2e-08 Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDG---VGYSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG V SW + + E V D MM+ A +P NTP TKE Y YR IFE + Sbjct: 466 KEAFSDGITSVKNSWFKILQDYVEHQVDDAMMATAAQKFPFNTPKTKEGYFYRQIFEHHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P + LT W +W DPS R Sbjct: 526 PGRADWLT--------------HYWMPKWINATDPSAR 549
>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 560 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Frame = -1 Query: 547 KEQFSDGVGY---SWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSDG+ SW + + + V D ++ A YP N P TKE+Y YR IFE+ + Sbjct: 466 KEAFSDGIASVKKSWFSILQDYIDQQVDDLLLEKAAEKYPFNPPRTKESYYYRQIFEKHY 525 Query: 376 PQNSAILTVPGGPSVACSTAKAVEWDARWSGNLDPSGR 263 P S+ L W RW DPS R Sbjct: 526 PGRSSWL--------------PHYWMPRWVEATDPSAR 549
>ASNS_MIMIV (Q5UQE1) Probable asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) (Glutamine-dependent asparagine synthetase) Length = 549 Score = 34.7 bits (78), Expect = 0.18 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Frame = -1 Query: 547 KEQFSDGVG---YSWIDGXKAHTESNVTDKMMSNAKFIYPHNTPTTKEAYCYRMIFERFF 377 KE FSD V +W + TE TD+ + N+ Y N P KEA YR IF + Sbjct: 462 KEAFSDAVSSKEINWYRSIQKITEEIYTDEKLQNSN--YKFNKPEIKEALYYRDIFNSHY 519
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 33.1 bits (74), Expect = 0.53 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Frame = -2 Query: 462 CQMRSSFTHTTPRLQKRPTVTG*YLRGSSPRT----RQS*QCQAGQASHAAR--RRQ*SG 301 C S+FT P Q + T + GSSP T R+ CQ+G H + R G Sbjct: 3060 CPANSNFTSCLPSCQPSCSNTDVHCEGSSPNTLSSCREGCVCQSGYVLHNDKCILRNQCG 3119 Query: 300 MLGGRGTWIPQGEQHLES 247 +G IP+G+ + S Sbjct: 3120 CKDAQGALIPEGKTWITS 3137
>SIX3_CHICK (O42406) Homeobox protein SIX3 (Sine oculis homeobox homolog 3)| (CSIX3) Length = 314 Score = 32.0 bits (71), Expect = 1.2 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 7/94 (7%) Frame = -3 Query: 440 PTQHPDYKRGLLLQDDI*EVLPPELGN-------PDSARRAKRRMQHGEGSRVGCSVVGE 282 P +P KR L + P ++GN D A AK R+QH + G + E Sbjct: 211 PYPNPSKKRELAQATGL---TPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGQSGMRSLAE 267 Query: 281 PGSLRESSTWSPSLGL*AGASPSNHHGRNQQEAE 180 PG SS SPS ASP+ + AE Sbjct: 268 PGCPTHSSAESPS----TAASPTTSVSSLTERAE 297
>POLG_RHDVF (P27410) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 3.4 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>POLG_RHDV3 (P27411) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 30.4 bits (67), Expect = 3.4 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R RLA P G+ + +CN Sbjct: 33 PCCIRATGRLAWPVFPGQNGKEGPLETCN 61
>FUT7_HUMAN (Q11130) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 7) (FUCT-VII) (Selectin-ligand synthase) Length = 342 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 184 ASCWFLP*WLLGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLLPSPCCMR-RLARLALS 357 A+ W L WLLG AP P Q +++ P T+ P LPS C R +AR LS Sbjct: 25 AALWLL--WLLGSAPRGTPAP--QPTITILVWHWPFTDQPPELPSDTCTRYGIARCHLS 79
>DNLJ_MYCLE (O33102) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase| [NAD+]) Length = 694 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +1 Query: 214 LGDAPAHRPRDGLQVLLSLRDPGSPTTEHPTLL 312 LG RP Q L+LRD G P +EH TL+ Sbjct: 238 LGHIEGFRPATQHQAYLALRDWGLPVSEHTTLV 270
>ISP5_SCHPO (P40901) Sexual differentiation process putative amino-acid| permease isp5 Length = 580 Score = 29.6 bits (65), Expect = 5.9 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 11/84 (13%) Frame = -3 Query: 467 DDVKCEVHLPTQHPDY-------KRGLLLQDDI*EVLPPELGNPDSARR---AKRRMQHG 318 +DVK + + Y +RG L Q LPPE G P +R A+ G Sbjct: 33 EDVKVDASYEKEEVGYGELEVVPERGNLFQRWYRSFLPPEDGKPQKLKRTLTARHIQMIG 92 Query: 317 EGSRVGCSV-VGEPGSLRESSTWS 249 G +G V VG +LRE S Sbjct: 93 IGGAIGTGVWVGSKNTLREGGAAS 116
>GLYA_GLUOX (Q5FNK4) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 434 Score = 29.3 bits (64), Expect = 7.7 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Frame = -1 Query: 313 AVEWDARWSGNLDPSGRAALGV----HLSAYEQEHLPATIMAGTSKKPRMIKVA 164 A + +W ++ RA G+ + A +EH P I+AG+S PR+I A Sbjct: 142 APNYSGKWFNSVQYGVRAEDGLIDYDQMEALAREHKPKIIVAGSSAYPRVIDFA 195
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -3 Query: 374 PELGNPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHG 201 P L P S + R++ G+ + P S ++ SPSLG GA SN HG Sbjct: 1183 PSLAAPSSPSLSHRQVMGPLGTGFHGNTGSSPQSSAATTPGSPSLGRHPGAQVSNLHG 1240
>POLG_RHDVB (Q89273) Genome polyprotein (p254) [Contains: p16; p23; Helicase| (2C-like protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, sub Length = 2344 Score = 29.3 bits (64), Expect = 7.7 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +1 Query: 319 PCCMRRLARLALSGLPSSGGRTSQISSCN 405 PCC+R +LA P G+ + +CN Sbjct: 33 PCCIRATGKLAWPVFPGQNGKEGPLKTCN 61
>PSD2_PEA (P81930) Defense-related peptide 2 (Defensin-2) (Antifungal protein| Psd2) Length = 47 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +2 Query: 146 NCDTRCRNLDHPRLLAGSCHDG--CW 217 NC+ CRN +H LL+G C D CW Sbjct: 19 NCNKHCRNNEH--LLSGRCRDDFRCW 42
>10KD_VIGUN (P18646) 10 kDa protein precursor (Clone PSAS10)| Length = 75 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = +2 Query: 137 STLNCDTRCRNLDHPRLLAGSCHDG--CW 217 +T +CD C+N +H LL+G C D CW Sbjct: 44 TTGSCDDHCKNKEH--LLSGRCRDDVRCW 70
>RNC_HUMAN (Q9NRR4) Ribonuclease III (EC 3.1.26.3) (RNase III) (Drosha) (p241)| Length = 1374 Score = 28.9 bits (63), Expect = 10.0 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Frame = -3 Query: 353 SARRAKRRMQHGEGSRVGCSVVGEPGS---------LRESSTWSPSLGL*AGASPSNHHG 201 S R+ ++ G G SVV EP ++ + +W+P L + SPS Sbjct: 302 SLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREKK 361 Query: 200 RNQQEAEDDQ 171 R + E E D+ Sbjct: 362 RARWEEEKDR 371
>LUXS_STRPY (P0C0C7) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP8 (P0A3P9) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP6 (Q5XAN3) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP3 (P0A3P8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>LUXS_STRP1 (P0C0C8) S-ribosylhomocysteine lyase (EC 4.4.1.21) (Autoinducer-2| production protein luxS) (AI-2 synthesis protein) Length = 160 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Frame = -2 Query: 213 QPSWQEPARSRG*SRLRHLVSQL---RVDGVLSCLPFLIRNKMYLVL 82 QP+ Q + G + HL+++L R+DG++ C PF R +L++ Sbjct: 45 QPN-QNSIETAGLHTIEHLLAKLIRQRIDGMIDCSPFGCRTGFHLIM 90
>FDHA_METJA (P61159) Formate dehydrogenase alpha chain (EC 1.2.1.2)| Length = 673 Score = 28.9 bits (63), Expect = 10.0 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 356 QDCRVLGEEPLKYHPVTVGLFCSRG 430 +D RV+G P K HP+ G C++G Sbjct: 24 KDGRVIGIHPNKRHPINEGKLCAKG 48
>FOXH1_XENLA (P70056) Forkhead box protein H1 (Forkhead activin signal| transducer 1) (Fast-1) (xFAST-1) Length = 518 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 Query: 269 RESSTWSPSLGL*AGASPSNHHG 201 RE TWSP G G SP H G Sbjct: 62 REGGTWSPDRGSMYGLSPGTHEG 84
>ATP6_PYLLI (Q37601) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 248 Score = 28.9 bits (63), Expect = 10.0 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 129 GHHQLSIATPGAATLIILGFLLVPAMMVA 215 G H LS+ PG T I+L FLLVP +V+ Sbjct: 137 GFHMLSLFLPG-GTSIVLAFLLVPIEIVS 164
>D108B_PANTR (Q5IAA6) Beta-defensin 108B precursor (Defensin, beta 108B)| (Defensin, beta 108) (Beta-defensin 8) (DEFB-8) (BD-8) (cBD-8) (Fragment) Length = 53 Score = 28.9 bits (63), Expect = 10.0 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = +2 Query: 194 GSCHDGCWEMLLLIGREMDSK-CCSP*GIQ 280 GSC D C E + +GR ++S+ CC P G Q Sbjct: 13 GSCRDFCLETEIHVGRCLNSRPCCLPLGHQ 42
>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 656 Score = 28.9 bits (63), Expect = 10.0 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = -3 Query: 362 NPDSARRAKRRMQHGEGSRVGCSVVGEPGSLRESSTWSPSLGL*AGASPSNHHGRNQQEA 183 +PD RRA G G+ VG + S +SS P + A+PS HH + QQ+ Sbjct: 115 DPDLQRRA------GSGTGVGAMLARGSASPHKSSP-QPLV-----ATPSQHHQQQQQQI 162 Query: 182 E-DDQGCGTW--CRN*ELMVSCPACR 114 + + CG CR E C CR Sbjct: 163 KRSARMCGECEACRRTEDCGHCDFCR 188
>MURD_NITEU (Q82VS5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 471 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = -1 Query: 427 PTTKEAYCYRMIFERFFPQNSAILTVPGG------PSVACSTAKAVEWDARWSGNLDPSG 266 P + + + +++ P + IL + G S+ K WD +GN+ P+ Sbjct: 93 PVIGDIELFAVALDQYAPPGTKILAITGSNGKTTVTSMVGEMVKNAGWDVEVAGNIGPAA 152 Query: 265 RAALGVHLSAYEQEHL 218 AL + A + HL Sbjct: 153 LDALMQRMDANKWPHL 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,123,280 Number of Sequences: 219361 Number of extensions: 1942581 Number of successful extensions: 5862 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 5644 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5860 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
