| Clone Name | rbasd25e14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... | 44 | 2e-04 | 2 | APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... | 42 | 6e-04 | 3 | HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecith... | 36 | 0.042 | 4 | PSV_DICDI (P08798) Prespore vesicle protein precursor (PSV) | 35 | 0.072 | 5 | UUP_ECOLI (P43672) ABC transporter ATP-binding protein uup | 28 | 8.8 |
|---|
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 43.9 bits (102), Expect = 2e-04 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -1 Query: 422 DVYDYFQDIIDRPYMHGFNNSHAPCCTLGKVRXXXX-XXXXXXXCKDRSKYVXWDEYHPT 246 D+Y F +++ P +GF PCC +G + + S Y+ WD HP+ Sbjct: 371 DIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPS 430 Query: 245 DRANELIALETLKR 204 RA E+ + +K+ Sbjct: 431 QRAYEISNRKLVKK 444
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 42.0 bits (97), Expect = 6e-04 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = -1 Query: 422 DVYDYFQDIIDRPYMHGFNNSHAPCCTLGKVRXXXX-XXXXXXXCKDRSKYVXWDEYHPT 246 D+Y +++ P +GF + PCC G + C + S Y+ WD HPT Sbjct: 454 DIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPT 513 Query: 245 DRANELI 225 RA + I Sbjct: 514 QRAYKTI 520
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 35.8 bits (81), Expect = 0.042 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 4/79 (5%) Frame = -1 Query: 422 DVYDYFQDIIDRPYMHGFNNSHAPCCTLGKVRXXXXXXXXXXXCK----DRSKYVXWDEY 255 D + F+ + P HGF N+ PC + + + K+V WD Sbjct: 333 DTHALFETLTSAPEEHGFVNASDPCLDINRSSSVDYMYTHALRSECAASGAEKFVFWDVT 392 Query: 254 HPTDRANELIALETLKRLN 198 HPT + +A + L+ N Sbjct: 393 HPTTATHRYVAEKMLESSN 411
>PSV_DICDI (P08798) Prespore vesicle protein precursor (PSV)| Length = 513 Score = 35.0 bits (79), Expect = 0.072 Identities = 23/90 (25%), Positives = 30/90 (33%) Frame = -3 Query: 399 HHRPALHARLQQLPRAMLHARQGEADAHLHPAFHAXXXXXXXXXXXXXXXXXXXXRAHRA 220 H +PA HA QQ + H Q + H PA H A Sbjct: 335 HAKPAQHAAQQQHAKPAQHVAQQQQQQHAKPAAHTAAKPVQHNAQQQHAKPA-------A 387 Query: 219 RDAQAPQHHSRCQQHLQLACHGRRSSKCIR 130 A P H+ QQH + A H + + R Sbjct: 388 HTAAKPVQHNAAQQHAKPAAHAKPAVNAAR 417
>UUP_ECOLI (P43672) ABC transporter ATP-binding protein uup| Length = 635 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 186 NDCDVEALERLERDELVGPVRGVVLIPXH 272 ND DVE LE LE EL+ +G VL+ H Sbjct: 469 NDLDVETLELLE--ELIDSYQGTVLLVSH 495 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,015,776 Number of Sequences: 219361 Number of extensions: 798899 Number of successful extensions: 1909 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1866 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1902 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)