ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd24l07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
2gb|AY106281.1| Zea mays PCO117884 mRNA sequence 180 2e-42
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
5gb|BT013201.1| Lycopersicon esculentum clone 134365R, mRNA sequence 80 7e-12
6ref|NM_117833.2| Arabidopsis thaliana unknown protein AT4G17270 ... 58 2e-05
7gb|AY055792.1| Arabidopsis thaliana AT4g17270/dl4670w mRNA, comp... 58 2e-05
8gb|AF380659.1|AF380659 Arabidopsis thaliana AT4g17270/dl4670w mR... 58 2e-05
9emb|BX827267.1|CNS0A498 Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
10emb|BX827401.1|CNS0A2TI Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
11emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.36
12emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ... 44 0.36
13emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24... 42 1.4
14gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome... 42 1.4
15gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, compl... 42 1.4
16gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complet... 42 1.4
17emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in... 42 1.4
18emb|AL807813.6| Human DNA sequence from clone RP13-487C10 on chr... 42 1.4
19ref|NM_124127.1| Arabidopsis thaliana unknown protein AT5G47540 ... 40 5.7
20gb|AC183681.2| Pan troglodytes BAC clone CH251-278I15 from chrom... 40 5.7
21gb|AC162443.3| Mus musculus chromosome 7, clone RP23-457F4, comp... 40 5.7
22gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome ... 40 5.7
23gb|AC073127.11| Homo sapiens BAC clone RP11-645N11 from 7, compl... 40 5.7
24ref|XM_846937.1| PREDICTED: Canis familiaris similar to nuclear ... 40 5.7
25emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 ... 40 5.7
26gb|AC018924.9| Homo sapiens chromosome 15 clone RP11-355D13 map ... 40 5.7
27gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Canc... 40 5.7
28emb|BX000447.10| Zebrafish DNA sequence from clone DKEY-157O17 i... 40 5.7
29ref|XM_703869.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
30ref|XM_682743.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
31ref|XM_703868.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
32ref|XM_703867.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
33ref|XM_703866.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
34ref|XM_703865.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
35ref|XM_703864.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
36ref|XM_703863.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
37ref|XM_682203.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
38ref|XM_703634.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
39ref|XM_703633.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
40ref|XM_703632.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
41ref|XM_703631.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
42ref|XM_703630.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
43ref|XM_703629.1| PREDICTED: Danio rerio similar to phosphodieste... 40 5.7
44gb|AF428296.1|AF428296 Arabidopsis thaliana AT5g47540/MNJ7_13 mR... 40 5.7
45emb|BX005205.17| Zebrafish DNA sequence from clone DKEY-210P14 i... 40 5.7
46dbj|AK221953.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 5.7
47gb|AC158369.4| Pan troglodytes BAC clone CH251-554F11 from chrom... 40 5.7
48emb|BX831126.1|CNS0A0TQ Arabidopsis thaliana Full-length cDNA Co... 40 5.7
49emb|BX831657.1|CNS09YVG Arabidopsis thaliana Full-length cDNA Co... 40 5.7
50emb|BX088594.5| Zebrafish DNA sequence from clone RP71-1G17 in l... 40 5.7
51gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, com... 40 5.7 
>dbj|AK103268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H02, full
            insert sequence
          Length = 2391

 Score =  274 bits (138), Expect = 2e-70
 Identities = 198/218 (90%)
 Strand = Plus / Minus

                                                                        
Query: 203  agtgctgatatctcctttatgacctgctccttgtctgcctcaaactgctcatcctctttg 262
            ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 2142 agtgcagatatctcctttatgacctgctctttgtctgcctcgaactgctcatcctctttg 2083

                                                                        
Query: 263  tcagttttgaatccggcaaaaaatcgaagaagcttgcttcgatttgtgactagtatgttc 322
            ||| | |||||||||||||||||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 2082 tcaatcttgaatccggcaaaaaatcggagaagcttgcttcggtttgtgactagtatgttt 2023

                                                                        
Query: 323  acaacctcagctggtttgtttttatttgcagcgaatagcttgaacacatgaaaagattct 382
            |||||||||| ||| |||||||||||||| || |||| ||||||||||||||| | ||| 
Sbjct: 2022 acaacctcagttggcttgtttttatttgccgcaaataacttgaacacatgaaatgcttca 1963

                                                  
Query: 383  atctgaatatttttgcttgagtccctcaaaagattcat 420
            || ||||||||||||||||| || ||||| ||||||||
Sbjct: 1962 atttgaatatttttgcttgaatctctcaagagattcat 1925



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 96   atccatgcaagagactctcgtggtgcggtaaatacagtaatccacgagaggccact 151
            |||||||| | || |||||| |||| | ||||||||||| |||||||||| |||||
Sbjct: 2249 atccatgcgaaagcctctcggggtgggataaatacagtagtccacgagagaccact 2194
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>gb|AY106281.1| Zea mays PCO117884 mRNA sequence
          Length = 1557

 Score =  180 bits (91), Expect = 2e-42
 Identities = 184/215 (85%)
 Strand = Plus / Minus

                                                                        
Query: 209  gatatctcctttatgacctgctccttgtctgcctcaaactgctcatcctctttgtcagtt 268
            ||||| || |||||||| |||||||||||||| |||||||| ||||||||||||||| | 
Sbjct: 1415 gatatttcttttatgacatgctccttgtctgcttcaaactgttcatcctctttgtcaatc 1356

                                                                        
Query: 269  ttgaatccggcaaaaaatcgaagaagcttgcttcgatttgtgactagtatgttcacaacc 328
            |||||||| |||||||| ||||| |||||| ||| ||| ||||| ||||||||||| |||
Sbjct: 1355 ttgaatccagcaaaaaaacgaagtagcttgtttctattggtgaccagtatgttcacgacc 1296

                                                                        
Query: 329  tcagctggtttgtttttatttgcagcgaatagcttgaacacatgaaaagattctatctga 388
            |||| ||||||||||||||| ||||| || ||||||||||| ||||| |  || || || 
Sbjct: 1295 tcaggtggtttgtttttattcgcagcaaacagcttgaacacgtgaaatgcctcgatttgg 1236

                                               
Query: 389  atatttttgcttgagtccctcaaaagattcatcag 423
            |||||||| || || ||||| || |||||||||||
Sbjct: 1235 atatttttactcgaatcccttaagagattcatcag 1201
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  131 bits (66), Expect = 2e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                            
Query: 258      ctttgtcagttttgaatccggcaaaaaatcgaagaagcttgcttcgatttgtgactagta 317
                |||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 23706441 ctttgtcaatcttgaatccggcaaaaaatcggagaagcttgcttcggtttgtgactagta 23706382

                                                  
Query: 318      tgttcacaacctcagctggtttgtttttatttgc 351
                |||| |||||||||| ||| ||||||||||||||
Sbjct: 23706381 tgtttacaacctcagttggcttgtttttatttgc 23706348



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                         
Query: 203      agtgctgatatctcctttatgacctgctccttgtctgcctcaaactgctcatcctct 259
                ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 23706719 agtgcagatatctcctttatgacctgctctttgtctgcctcgaactgttcatcctct 23706663



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                          
Query: 361      cttgaacacatgaaaagattctatctgaatatttttgcttga 402
                ||||||||||||||| | ||| || |||||||||||||||||
Sbjct: 23706245 cttgaacacatgaaatgcttcaatttgaatatttttgcttga 23706204



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 96       atccatgcaagagactctcgtggtgcggtaaatacagtaatccacgagaggccact 151
                |||||||| | || |||||| |||| | ||||||||||| |||||||||| |||||
Sbjct: 23706826 atccatgcgaaagcctctcggggtgggataaatacagtagtccacgagagaccact 23706771
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  131 bits (66), Expect = 2e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 258   ctttgtcagttttgaatccggcaaaaaatcgaagaagcttgcttcgatttgtgactagta 317
             |||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 51055 ctttgtcaatcttgaatccggcaaaaaatcggagaagcttgcttcggtttgtgactagta 50996

                                               
Query: 318   tgttcacaacctcagctggtttgtttttatttgc 351
             |||| |||||||||| ||| ||||||||||||||
Sbjct: 50995 tgtttacaacctcagttggcttgtttttatttgc 50962



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 203   agtgctgatatctcctttatgacctgctccttgtctgcctcaaactgctcatcctct 259
             ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 51333 agtgcagatatctcctttatgacctgctctttgtctgcctcgaactgttcatcctct 51277



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 361   cttgaacacatgaaaagattctatctgaatatttttgcttga 402
             ||||||||||||||| | ||| || |||||||||||||||||
Sbjct: 50859 cttgaacacatgaaatgcttcaatttgaatatttttgcttga 50818



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 96    atccatgcaagagactctcgtggtgcggtaaatacagtaatccacgagaggccact 151
             |||||||| | || |||||| |||| | ||||||||||| |||||||||| |||||
Sbjct: 51440 atccatgcgaaagcctctcggggtgggataaatacagtagtccacgagagaccact 51385
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>gb|BT013201.1| Lycopersicon esculentum clone 134365R, mRNA sequence
          Length = 1626

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 142/176 (80%)
 Strand = Plus / Minus

                                                                        
Query: 233  ttgtctgcctcaaactgctcatcctctttgtcagttttgaatccggcaaaaaatcgaaga 292
            ||||| ||||||||||||||||||||||| ||||| || ||  ||||||| |  ||||||
Sbjct: 1370 ttgtcagcctcaaactgctcatcctctttttcagtcttaaaatcggcaaagaggcgaaga 1311

                                                                        
Query: 293  agcttgcttcgatttgtgactagtatgttcacaacctcagctggtttgtttttatttgca 352
            || |||||||  ||||  || || ||| | ||||  || |  |||||||| | |||||| 
Sbjct: 1310 agtttgcttctgtttgctacaaggatgctaacaatatcgggaggtttgttgtgatttgcc 1251

                                                                    
Query: 353  gcgaatagcttgaacacatgaaaagattctatctgaatatttttgcttgagtccct 408
            || ||||||||||| |||||||| | ||||||||| ||| | |||||||| |||||
Sbjct: 1250 gcaaatagcttgaagacatgaaatgcttctatctggatactcttgcttgactccct 1195
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>ref|NM_117833.2| Arabidopsis thaliana unknown protein AT4G17270 mRNA, complete cds
          Length = 1883

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 359  agcttgaacacatgaaaagattctatctgaatatttttgcttgagtccctcaaaagattc 418
            |||||||| ||||| |||| ||||||||||||| | |||||||| || || | |||||||
Sbjct: 1133 agcttgaaaacatggaaagcttctatctgaatagtcttgcttgattctctgagaagattc 1074

                 
Query: 419  atcag 423
            |||||
Sbjct: 1073 atcag 1069
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>gb|AY055792.1| Arabidopsis thaliana AT4g17270/dl4670w mRNA, complete cds
          Length = 1032

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                       
Query: 359 agcttgaacacatgaaaagattctatctgaatatttttgcttgagtccctcaaaagattc 418
           |||||||| ||||| |||| ||||||||||||| | |||||||| || || | |||||||
Sbjct: 854 agcttgaaaacatggaaagcttctatctgaatagtcttgcttgattctctgagaagattc 795

                
Query: 419 atcag 423
           |||||
Sbjct: 794 atcag 790
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>gb|AF380659.1|AF380659 Arabidopsis thaliana AT4g17270/dl4670w mRNA, complete cds
          Length = 1519

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 359  agcttgaacacatgaaaagattctatctgaatatttttgcttgagtccctcaaaagattc 418
            |||||||| ||||| |||| ||||||||||||| | |||||||| || || | |||||||
Sbjct: 1132 agcttgaaaacatggaaagcttctatctgaatagtcttgcttgattctctgagaagattc 1073

                 
Query: 419  atcag 423
            |||||
Sbjct: 1072 atcag 1068
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>emb|BX827267.1|CNS0A498 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS2ZH12 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1464

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 359  agcttgaacacatgaaaagattctatctgaatatttttgcttgagtccctcaaaagattc 418
            |||||||| ||||| |||| ||||||||||||| | |||||||| || || | |||||||
Sbjct: 1103 agcttgaaaacatggaaagcttctatctgaatagtcttgcttgattctctgagaagattc 1044

                 
Query: 419  atcag 423
            |||||
Sbjct: 1043 atcag 1039
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>emb|BX827401.1|CNS0A2TI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS50ZD04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1381

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 359  agcttgaacacatgaaaagattctatctgaatatttttgcttgagtccctcaaaagattc 418
            |||||||| ||||| |||| ||||||||||||| | |||||||| || || | |||||||
Sbjct: 1100 agcttgaaaacatggaaagcttctatctgaatagtcttgcttgattctctgagaagattc 1041

                 
Query: 419  atcag 423
            |||||
Sbjct: 1040 atcag 1036
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>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
          Length = 207674

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 361   cttgaacacatgaaaagattctatctgaatatttttgcttga 402
             |||||| ||||| |||| ||||||||||||| | ||||||||
Sbjct: 42878 cttgaaaacatggaaagcttctatctgaatagtcttgcttga 42837
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>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
          Length = 198788

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 361   cttgaacacatgaaaagattctatctgaatatttttgcttga 402
             |||||| ||||| |||| ||||||||||||| | ||||||||
Sbjct: 32243 cttgaaaacatggaaagcttctatctgaatagtcttgcttga 32202
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>emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24 on chromosome Xp11.1-11.23
            Contains the ZXDB gene for zinc finger, X-linked,
            duplicated B and a CpG island, complete sequence
          Length = 96558

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  cagtgctgatatctcctttat 222
            |||||||||||||||||||||
Sbjct: 2730 cagtgctgatatctcctttat 2750
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>gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome 14, complete sequence
          Length = 180263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     tgcacaggaagtctattatta 62
              |||||||||||||||||||||
Sbjct: 127869 tgcacaggaagtctattatta 127889
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>gb|AC009969.10| Homo sapiens BAC clone RP11-418G17 from 2, complete sequence
          Length = 166892

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   cagtgctgatatctcctttat 222
             |||||||||||||||||||||
Sbjct: 36098 cagtgctgatatctcctttat 36118
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>gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complete sequence
          Length = 188164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   aatagcttgaacacatgaaaa 376
             |||||||||||||||||||||
Sbjct: 31010 aatagcttgaacacatgaaaa 31030
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>emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in linkage group 4,
             complete sequence
          Length = 195795

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   taatccacgagaggccacttt 153
             |||||||||||||||||||||
Sbjct: 13143 taatccacgagaggccacttt 13163
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>emb|AL807813.6| Human DNA sequence from clone RP13-487C10 on chromosome X Contains a
             neuronal apoptosis inhibitor protein 2 (NALP2) pseudogene,
             complete sequence
          Length = 106958

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   cagtgctgatatctcctttat 222
             |||||||||||||||||||||
Sbjct: 30050 cagtgctgatatctcctttat 30030
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>ref|NM_124127.1| Arabidopsis thaliana unknown protein AT5G47540 mRNA, complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 233 ttgtctgcctcaaactgctcatcctctttgtc 264
           |||||||| ||||||  |||||||||||||||
Sbjct: 983 ttgtctgcttcaaacctctcatcctctttgtc 952
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>gb|AC183681.2| Pan troglodytes BAC clone CH251-278I15 from chromosome unknown,
             complete sequence
          Length = 185618

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cagctggtttgtttttattt 349
             ||||||||||||||||||||
Sbjct: 44586 cagctggtttgtttttattt 44605
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>gb|AC162443.3| Mus musculus chromosome 7, clone RP23-457F4, complete sequence
          Length = 176520

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    gctggtttgtttttatttgc 351
              ||||||||||||||||||||
Sbjct: 140656 gctggtttgtttttatttgc 140675
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>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence
          Length = 214625

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   atcagggaagttacagtgct 208
             ||||||||||||||||||||
Sbjct: 36553 atcagggaagttacagtgct 36534
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>gb|AC073127.11| Homo sapiens BAC clone RP11-645N11 from 7, complete sequence
          Length = 155842

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    tgatatctcctttatgacct 227
              ||||||||||||||||||||
Sbjct: 104832 tgatatctcctttatgacct 104851
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>ref|XM_846937.1| PREDICTED: Canis familiaris similar to nuclear receptor subfamily 5,
            group A, member 1 (LOC609642), mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 233  ttgtctgcctcaaactgctcatcctctt 260
            |||||||||||||| | |||||||||||
Sbjct: 1115 ttgtctgcctcaaattcctcatcctctt 1142
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>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6,
             complete sequence
          Length = 171645

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   atcctctttgtcagttttga 272
             ||||||||||||||||||||
Sbjct: 36071 atcctctttgtcagttttga 36090
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>gb|AC018924.9| Homo sapiens chromosome 15 clone RP11-355D13 map 15q15, complete
             sequence
          Length = 182764

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cagctggtttgtttttattt 349
             ||||||||||||||||||||
Sbjct: 70891 cagctggtttgtttttattt 70910
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>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 127439

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tggtttgtttttatttgcag 353
              ||||||||||||||||||||
Sbjct: 106197 tggtttgtttttatttgcag 106178
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>emb|BX000447.10| Zebrafish DNA sequence from clone DKEY-157O17 in linkage group 8,
            complete sequence
          Length = 118548

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 333  ctggtttgtttttatttgca 352
            ||||||||||||||||||||
Sbjct: 6829 ctggtttgtttttatttgca 6848
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>ref|XM_703869.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 8 (LOC565706), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_682743.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 1 (LOC565706), mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 606 atcctctttgtcagttttga 587
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>ref|XM_703868.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 7 (LOC565706), mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703867.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 6 (LOC565706), mRNA
          Length = 1755

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703866.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 5 (LOC565706), mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 606 atcctctttgtcagttttga 587
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>ref|XM_703865.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 4 (LOC565706), mRNA
          Length = 2085

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 606 atcctctttgtcagttttga 587
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>ref|XM_703864.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 3 (LOC565706), mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 606 atcctctttgtcagttttga 587
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>ref|XM_703863.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B,
           cAMP-specific (phosphodiesterase E4 dunce homolog,
           Drosophila), transcript variant 2 (LOC565706), mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 606 atcctctttgtcagttttga 587
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>ref|XM_682203.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 1 (LOC565068), mRNA
          Length = 1563

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703634.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 7 (LOC565068), mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703633.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 6 (LOC565068), mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703632.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 5 (LOC565068), mRNA
          Length = 1755

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703631.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 4 (LOC565068), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703630.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 3 (LOC565068), mRNA
          Length = 1971

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>ref|XM_703629.1| PREDICTED: Danio rerio similar to phosphodiesterase 4B, cAMP
           specific, transcript variant 2 (LOC565068), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 253 atcctctttgtcagttttga 272
           ||||||||||||||||||||
Sbjct: 468 atcctctttgtcagttttga 449
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>gb|AF428296.1|AF428296 Arabidopsis thaliana AT5g47540/MNJ7_13 mRNA, complete cds
          Length = 1570

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 233  ttgtctgcctcaaactgctcatcctctttgtc 264
            |||||||| ||||||  |||||||||||||||
Sbjct: 1281 ttgtctgcttcaaacctctcatcctctttgtc 1250
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>emb|BX005205.17| Zebrafish DNA sequence from clone DKEY-210P14 in linkage group 16,
              complete sequence
          Length = 164219

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    agcgaatagcttgaacacat 371
              ||||||||||||||||||||
Sbjct: 112522 agcgaatagcttgaacacat 112503
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>dbj|AK221953.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL22-49-H02
          Length = 337

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 233 ttgtctgcctcaaactgctcatcctctttgtc 264
           |||||||| ||||||  |||||||||||||||
Sbjct: 48  ttgtctgcttcaaacctctcatcctctttgtc 17
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>gb|AC158369.4| Pan troglodytes BAC clone CH251-554F11 from chromosome unknown, complete
              sequence
          Length = 201901

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    cagctggtttgtttttattt 349
              ||||||||||||||||||||
Sbjct: 145664 cagctggtttgtttttattt 145683
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>emb|BX831126.1|CNS0A0TQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS5ZD12 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 233  ttgtctgcctcaaactgctcatcctctttgtc 264
            |||||||| ||||||  |||||||||||||||
Sbjct: 1349 ttgtctgcttcaaacctctcatcctctttgtc 1318
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>emb|BX831657.1|CNS09YVG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH21ZE04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1402

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 233  ttgtctgcctcaaactgctcatcctctttgtc 264
            |||||||| ||||||  |||||||||||||||
Sbjct: 1264 ttgtctgcttcaaacctctcatcctctttgtc 1233
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>emb|BX088594.5| Zebrafish DNA sequence from clone RP71-1G17 in linkage group 1,
             complete sequence
          Length = 144022

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 383   atctgaatatttttgcttgagtcc 406
             |||||||| |||||||||||||||
Sbjct: 47415 atctgaatttttttgcttgagtcc 47392
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>gb|AC158183.2| Selaginella moellendorffii clone JGIASXY-5D8, complete sequence
          Length = 39479

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 228   gctccttgtctgcctcaaactgctcatcctct 259
             ||||||| ||| ||||||||||||| ||||||
Sbjct: 11443 gctccttttcttcctcaaactgctcgtcctct 11474


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,294,099
Number of Sequences: 3902068
Number of extensions: 4294099
Number of successful extensions: 91029
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90920
Number of HSP's gapped (non-prelim): 109
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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