ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23p19 |
|---|---|
| Clone Library Name | barley_pub |
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 233 bits (594), Expect = 2e-61 Identities = 106/119 (89%), Positives = 115/119 (96%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQPYHLA R PARGQIHGFRMALWYEHLGMLDDVFQRPES+ECVQKVNRIA+KYW Sbjct: 694 IAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYW 753 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 D+YSSDDL+QDLPGHLLSYPIGVA+DGVVTELPGME+FPDTRAR+LG KSDY+PPILT+ Sbjct: 754 DMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGAKSDYMPPILTS 812
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 228 bits (580), Expect = 9e-60 Identities = 106/119 (89%), Positives = 111/119 (93%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMGAYQPYHLA R PARGQIHGFRM+LWYEHLGML+DVFQRPESVECVQKVN +A+KYW Sbjct: 694 IAMGAYQPYHLATRQPARGQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYW 753 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSSDDLEQDLPGHLLSYPIGV DG VTELPGME FPDTRAR+LG KSDYLPPILTT Sbjct: 754 DLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGNKSDYLPPILTT 812
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 212 bits (539), Expect = 5e-55 Identities = 96/119 (80%), Positives = 107/119 (89%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQPYHLAN PARGQ++GFRM+LWYEHLGML D FQRPES EC+ KVN+IADKYW Sbjct: 691 IAMGGYQPYHLANTQPARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIADKYW 750 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE+DLPGHLL YPIGVA++G VTELPG EFFPDT+ARILG K+DYLPPILTT Sbjct: 751 DLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGAKADYLPPILTT 809
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 212 bits (539), Expect = 5e-55 Identities = 98/119 (82%), Positives = 107/119 (89%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMGAYQP+HLA R PARGQIHGFRMALWYEHLGMLD+ F PES ECV KVNR+ADKYW Sbjct: 690 IAMGAYQPHHLATREPARGQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMADKYW 749 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE+DLPGHLL YPIGVA++G VTELPG E FPDT+AR+LGTKSDYLPPILTT Sbjct: 750 DLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGTKSDYLPPILTT 808
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 209 bits (531), Expect = 4e-54 Identities = 93/119 (78%), Positives = 105/119 (88%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQPYHL+ R PARGQIHGFRM+LWYEHLGMLD+ F P S EC+QKVNR+ADKYW Sbjct: 692 IAMGGYQPYHLSTRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVADKYW 751 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE DLPGHLL YPIG+A++G +TELPG EFFPDT+ARILG KSDY+PPILTT Sbjct: 752 DLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYMPPILTT 810
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 208 bits (530), Expect = 6e-54 Identities = 93/119 (78%), Positives = 107/119 (89%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQP+HL++R PARGQIHGFRM+LWYEHLGMLD+ F P S+EC++KVNRI+DKYW Sbjct: 692 IAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISDKYW 751 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 D YSS+ LE DLPGHLL YPIGVA++G +TELPG EFFPDT+ARILGTKSDYLPPILTT Sbjct: 752 DFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYLPPILTT 810
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1) (Choline| phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 207 bits (527), Expect = 1e-53 Identities = 95/119 (79%), Positives = 105/119 (88%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMGAYQP+HLA R PARGQIHGFRM+LWYEHLGMLDD PESV+CVQKVN +ADKYW Sbjct: 690 IAMGAYQPHHLATREPARGQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVADKYW 749 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE DLPGHLL YPI VA++G VTELPG EFFPDT+AR+LG KSD+LPPILTT Sbjct: 750 DLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGAKSDFLPPILTT 808
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 206 bits (524), Expect = 3e-53 Identities = 94/119 (78%), Positives = 107/119 (89%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMGAYQP+HL+ R PARGQIHGFRM+LWYEHLGMLD+ F PES ECV+KVN++A+KYW Sbjct: 690 IAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYW 749 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE DLPGHLL YPIGVA++G VTELPG EFFPDT+AR+LG KSDYLPPILTT Sbjct: 750 DLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGAKSDYLPPILTT 808
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 204 bits (519), Expect = 1e-52 Identities = 92/119 (77%), Positives = 104/119 (87%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQP+HL++R PARGQIHGFRM+LWYEHLGMLD+ F P SVEC++KVNRI+DKYW Sbjct: 692 IAMGGYQPHHLSHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYW 751 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 DLYSS+ LE DLPGHLL YP+ V +G VTE PG EFFPDT+ARILGTKSDYLPPILTT Sbjct: 752 DLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGTKSDYLPPILTT 810
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 201 bits (510), Expect = 1e-51 Identities = 89/119 (74%), Positives = 103/119 (86%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYW 314 IAMG YQP+HL++R PARGQ+HGFRM+LWYEHLGMLD+ F P S+EC++KVNRIADKYW Sbjct: 694 IAMGGYQPHHLSHRQPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIADKYW 753 Query: 313 DLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 D YSS+ LE DLPGHLL YPI V N+G +TELPG EFFPD++ARILG K DYLPPILTT Sbjct: 754 DFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGNKVDYLPPILTT 812
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2) (Choline| phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 175 bits (443), Expect = 7e-44 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%) Frame = -3 Query: 493 IAMGAYQPYHLANRX-PARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKY 317 IAMGA+QP HL + ARGQIHGFRM+LWYEHLGML D F PES+ECVQ+VN++ADKY Sbjct: 700 IAMGAFQPCHLNTKGLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKY 759 Query: 316 WDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPILTT 137 WDLY+SD+L DLPGHLL+YP+ V +G VTELPG +FFPDT+A ++GTK + LPP LTT Sbjct: 760 WDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGTKGN-LPPFLTT 818
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 140 bits (352), Expect = 3e-33 Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 4/123 (3%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMGAYQP HL + R GQI FR++LW EHL + + FQ PES EC++ VN AD+ Sbjct: 698 IAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADE 757 Query: 319 YWDLYSSDDLEQ--DLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPI 146 W LYS+ + + DLPGHLLSYPI + ++G VT L G EFFPDT A+++G KS+YLPPI Sbjct: 758 LWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVGEKSNYLPPI 817 Query: 145 LTT 137 LT+ Sbjct: 818 LTS 820
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 112 bits (279), Expect = 7e-25 Identities = 54/110 (49%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPA--RGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMGAYQP H R + RGQI+G+RM+LW EH+ LDD F +PES+ECV+KV + ++ Sbjct: 849 IAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGER 908 Query: 319 YWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 170 W ++++++ D+ GHLL YP+ V G V LPG E FPD I+GT Sbjct: 909 NWKQFAAEEV-SDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGT 957
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 109 bits (272), Expect = 5e-24 Identities = 50/110 (45%), Positives = 77/110 (70%), Gaps = 2/110 (1%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMG YQP+H + +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++++ Sbjct: 748 IAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSEL 807 Query: 319 YWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 170 W Y+++++ ++PGHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 808 NWRQYAAEEV-TEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGS 856
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD delta)| Length = 868 Score = 108 bits (270), Expect = 8e-24 Identities = 58/122 (47%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Frame = -3 Query: 493 IAMGAYQPYHL---ANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIAD 323 IAMGAYQP H R P RGQ++G+RM+LW EHLG D F P +EC++KVN I++ Sbjct: 749 IAMGAYQPNHTWAHKGRHP-RGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISE 807 Query: 322 KYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPIL 143 + W + D +L GHL+ YP+ V DG V+ LP E FPD +I+G S LP L Sbjct: 808 ENWKRF-IDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTL 866 Query: 142 TT 137 TT Sbjct: 867 TT 868
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 108 bits (270), Expect = 8e-24 Identities = 51/110 (46%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPA--RGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMGAYQP H R + RGQI+G+RM+LW EH+ +LDD F PES+ CV+KV +A++ Sbjct: 797 IAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEE 856 Query: 319 YWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 170 W+ + S+++ ++ GHL+ YP+ V G V LPG E FPD ++G+ Sbjct: 857 NWEQFRSEEV-SEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGS 905
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 106 bits (265), Expect = 3e-23 Identities = 49/110 (44%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMG YQP+H + +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++++ Sbjct: 706 IAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSEL 765 Query: 319 YWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 170 W Y+++++ ++ GHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 766 NWGQYAAEEV-TEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGS 814
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 102 bits (254), Expect = 6e-22 Identities = 48/110 (43%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPAR--GQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADK 320 IAMG YQP++ +R GQI G+RM+LW EHLG L+ F+ PE++ECV++V ++++ Sbjct: 740 IAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSEL 799 Query: 319 YWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGT 170 W Y+++++ ++ GHLL YP+ V G V+ LPG E FPD +I+G+ Sbjct: 800 NWRQYAAEEV-TEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGS 848
>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD| epsilon) (PLDalpha3) Length = 762 Score = 89.4 bits (220), Expect = 5e-18 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 4/123 (3%) Frame = -3 Query: 493 IAMGAYQPYHLANRXPARGQIHGFRMALWYEHLG---MLDDVFQ-RPESVECVQKVNRIA 326 IA+G YQ +I +R++LWYEH G DD+ PES+ECV+ + I Sbjct: 646 IAIGCYQ-----TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIG 700 Query: 325 DKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTRARILGTKSDYLPPI 146 ++ W++YS D + L HL++YPI V DG V E+ G FPDT+ + G +S PP+ Sbjct: 701 EQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTKTLVKGKRSKMFPPV 759 Query: 145 LTT 137 LTT Sbjct: 760 LTT 762
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 33.1 bits (74), Expect = 0.44 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = -2 Query: 233 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 138 R G H HP PHP+ L SPHP H Sbjct: 386 RPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH 417
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 32.3 bits (72), Expect = 0.74 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -2 Query: 233 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 138 R G H P+HP PHP+ L PH H Sbjct: 387 RPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQH 418
>SYE_AGRT5 (Q8U7H5) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 485 Score = 32.3 bits (72), Expect = 0.74 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +3 Query: 288 SRSSLEYKSQYLSAILFTFWTHSTLSGRWNTSSSI--PRCSYHSAIRKPWIWPRAGXLLA 461 +RS+LEY+ + L A+ +T T W+ + P Y + RKP WP A LL Sbjct: 50 TRSTLEYEQKVLEALRWTGLT-------WSEGPDVGGPYGPYRQSERKPMYWPYAEELLE 102 Query: 462 RWYGW 476 + + + Sbjct: 103 KGHAF 107
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 32.0 bits (71), Expect = 0.97 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Frame = +3 Query: 150 GGR*SDLVPRMRARVSGKN-SMPGSSVTTPSLATPMG*LSRWPGRSCSRSSLEYKSQYLS 326 GG S R+R G + S P + +LA P G S PG S S +S S + Sbjct: 598 GGASSGGAGGKRSRAKGTSTSSPAGKASPMNLAPPQGKPSPSPGSSSSSTSPATLSTQPT 657 Query: 327 AILFTFWTHSTL-----SGRWNTSSSIPRCSYHSA 416 + ++ HS L SG ++SSS +C H A Sbjct: 658 RLNSSYSIHSLLGGSSGSGSSSSSSSGKKCGDHPA 692
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = +2 Query: 92 TTKPRPHTGNAGRNLCGEDGGKVVRLGAEDAGPGVG 199 TT PR H G LC E G VR ED GPG+G Sbjct: 49 TTGPRAHIGGGALALCPESSG--VR---EDGGPGLG 79
>ENA_DROME (Q8T4F7) Protein enabled| Length = 834 Score = 30.4 bits (67), Expect = 2.8 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Frame = -2 Query: 488 HGRIPAIPS-------SQQXAGPGPDPRLPDGAVVRAPRYAG*RVPAPGERRVCPEGE 336 HG +P+ S SQQ P P+ P + P Y G VP P ++ P G+ Sbjct: 464 HGHLPSSASANSVVYASQQQMLPQAHPQAPQAPTMPGPGYGGPPVPPPQQQAENPYGQ 521
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 476 PAIPSSQQXAGPGPDPRLPDGAVVRAPRYAG*RVPAPGERR 354 PA P++ P P P GA AP+ G R PG+ R Sbjct: 148 PAAPAAPSTPAPAPSGPKPGGARPGAPKPGGARPSGPGQDR 188
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -2 Query: 194 HPGPHPRHQVGLPSPHPHH 138 HP PHP H P PHPHH Sbjct: 212 HPHPHP-HPHPHPHPHPHH 229
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 29.3 bits (64), Expect = 6.3 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = +3 Query: 99 NRGHTPEMQDAIYVVR-------MGGR*SDLVPRMRARVSGKNSMPGSSVTTPSLATP 251 NRG TP Q+ ++ +R M R L ++ V GK MPG P+L P Sbjct: 166 NRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
>HEMH_CAUCR (P57777) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 347 Score = 28.9 bits (63), Expect = 8.2 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -1 Query: 453 GSRPGARSTASGWRCGTST*VCWMTC 376 G PG S+A GWRCG W C Sbjct: 318 GKAPGTVSSACGWRCGAD----WSKC 339
>PRGR_CHICK (P07812) Progesterone receptor (PR)| Length = 786 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/56 (25%), Positives = 25/56 (44%) Frame = +3 Query: 90 EPPNRGHTPEMQDAIYVVRMGGR*SDLVPRMRARVSGKNSMPGSSVTTPSLATPMG 257 +PP G P ++ +Y L+P + +S+P +S P L +P+G Sbjct: 319 QPPRAGQEPSLECVLYKAE-----PPLLPGAYGPPAAPDSLPSTSAAPPGLYSPLG 369
>PTPRG_CHICK (Q98936) Receptor-type tyrosine-protein phosphatase gamma precursor| (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma) Length = 1422 Score = 28.9 bits (63), Expect = 8.2 Identities = 13/58 (22%), Positives = 27/58 (46%) Frame = -3 Query: 466 HLANRXPARGQIHGFRMALWYEHLGMLDDVFQRPESVECVQKVNRIADKYWDLYSSDD 293 ++A + P + F +W +H G++ + V+K R D+YW +S++ Sbjct: 898 YIATQGPLKSTFEDFWRMIWAQHTGIIVMI------TNLVEKGRRKCDQYWPTENSEE 949 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,947,225 Number of Sequences: 219361 Number of extensions: 1812859 Number of successful extensions: 5683 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5195 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5647 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
