ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd24d10 |
|---|---|
| Clone Library Name | barley_pub |
>Y074_SYNY3 (Q55790) Hypothetical UPF0051 protein slr0074| Length = 480 Score = 196 bits (498), Expect = 5e-50 Identities = 99/147 (67%), Positives = 115/147 (78%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T + QQADTGTKMIH GKN+RS IISKGISAG S N YRGLV+M A+ A N SQCDS+ Sbjct: 334 TNNKQQADTGTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQGARNYSQCDSM 393 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIGD+AAANT+P IQV + +VEHEASTSKIGEDQLFYF QRGI E AV+ ++ GFC+ Sbjct: 394 LIGDRAAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEEDAVSMLVSGFCK 453 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 V LP EFA E D L++LKLEG+VG Sbjct: 454 DVLNELPMEFAAEADKLLSLKLEGTVG 480
>YCF24_CYAPA (P48260) Hypothetical UPF0051 protein ycf24| Length = 486 Score = 196 bits (497), Expect = 7e-50 Identities = 98/147 (66%), Positives = 117/147 (79%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T YQQADTGTKMIH GKN+RSRIISKGISAG S+N YRGLV++ A A N SQCDSL Sbjct: 340 TNRYQQADTGTKMIHIGKNTRSRIISKGISAGHSQNSYRGLVKIGPKAVGARNYSQCDSL 399 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIGD + ANT+P +Q+ + +VEHEASTSKIGE+Q+FYF QRGI+ E+A++ +I GFCR Sbjct: 400 LIGDNSQANTFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGINAEEAISLIISGFCR 459 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF +LP EFA E D L+ LKLEGSVG Sbjct: 460 EVFNNLPMEFALEADKLLGLKLEGSVG 486
>YCF24_ODOSI (P49530) Hypothetical UPF0051 protein ycf24 (ORF486)| Length = 486 Score = 190 bits (483), Expect = 3e-48 Identities = 96/147 (65%), Positives = 114/147 (77%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +YQQADTG+KMIH GKN+RSRI+SKGISAG S+N YRGLV +++ A A N SQCDSL Sbjct: 340 TNNYQQADTGSKMIHVGKNTRSRIVSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSL 399 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG+ + ANT+P I V + ++EHEASTSKIGE+Q+FYF QRGI EK V MI GFC+ Sbjct: 400 LIGNLSNANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQ 459 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E D L+ LKLEGSVG Sbjct: 460 EVFTELPLEFAAEADRLLTLKLEGSVG 486
>YCF24_PORPU (P51240) Hypothetical UPF0051 protein ycf24 (ORF487)| Length = 487 Score = 189 bits (481), Expect = 5e-48 Identities = 94/147 (63%), Positives = 117/147 (79%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +YQ+ADTGTKMIH G N++S+IISKGISAGKS+N YRGLV++ + N+ N SQCDSL Sbjct: 341 TNNYQEADTGTKMIHIGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSFNSRNYSQCDSL 400 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG + ANT+P IQV + +VEHEASTSKI EDQ+FYF QRGI+ E++V+ MI GFC+ Sbjct: 401 LIGQSSQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEESVSLMISGFCK 460 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E D L++LKLEG+VG Sbjct: 461 DVFNELPMEFAVEADRLLSLKLEGTVG 487
>YCF24_GUITH (O78473) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 187 bits (476), Expect = 2e-47 Identities = 95/147 (64%), Positives = 114/147 (77%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +YQQADTGTKMIH G+ S+SRIISKGISAG S+N YRG V++N A + N+SQCDS+ Sbjct: 337 TNNYQQADTGTKMIHVGRGSKSRIISKGISAGYSKNTYRGQVKININALGSINNSQCDSM 396 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG + ANTYP IQV RVEHEASTSKI E+QLFYF QRGI E+A++ +I GFCR Sbjct: 397 LIGPYSQANTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISLLISGFCR 456 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E D L+++KLEG+VG Sbjct: 457 DVFVKLPMEFAVEADKLLSVKLEGTVG 483
>YCF24_ANTSP (Q02857) Hypothetical UPF0051 protein in atpA 3'region (ORF 3)| (Fragment) Length = 297 Score = 181 bits (459), Expect = 2e-45 Identities = 90/147 (61%), Positives = 112/147 (76%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +YQQADTG+KMIH GKN++SRI+SKGISAG S N YRGLV++ A + N SQCDSL Sbjct: 151 TNNYQQADTGSKMIHIGKNTKSRILSKGISAGYSANSYRGLVKIGPKAHYSRNYSQCDSL 210 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 L+ + + ANT+P IQ ++EHEASTSKIGE+Q+FYF QRGI+ E A++ MI GFC+ Sbjct: 211 LLSNTSKANTFPYIQAQNPYTKIEHEASTSKIGEEQIFYFLQRGINLENAISLMISGFCK 270 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 V LP EFA E D L+NLKLEG+VG Sbjct: 271 EVLNELPMEFAVEADRLLNLKLEGTVG 297
>YCF24_GALSU (P35912) Hypothetical UPF0051 protein in atpA 3'region (ORF X)| (Fragment) Length = 221 Score = 180 bits (456), Expect = 4e-45 Identities = 91/147 (61%), Positives = 110/147 (74%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T YQQADTG+KMIH GKNSRS+IISKGIS G S N YRG V+++ A A N SQCDSL Sbjct: 75 TNHYQQADTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSLNASRARNYSQCDSL 134 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG+ + ANT+P I+V S +EHEAS SKI E++LFYF QRGI E+A++ ++ GFC+ Sbjct: 135 LIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGISIEEAISLIVSGFCK 194 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E D L+ LKLEGSVG Sbjct: 195 EVFTELPLEFALEADKLLGLKLEGSVG 221
>SUFB_SHIFL (Q83KW2) Protein sufB| Length = 495 Score = 169 bits (427), Expect = 9e-42 Identities = 84/147 (57%), Positives = 107/147 (72%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +QQADTGTKMIH GKN++S IISKGISAG S+N YRGLV++ A NA N +QCDS+ Sbjct: 349 TSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSM 408 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY QRGI E A++ ++ GFC+ Sbjct: 409 LIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCK 468 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E L+ + LE SVG Sbjct: 469 DVFSELPLEFAVEAQKLLAISLEHSVG 495
>SUFB_ECOLI (P77522) Protein sufB| Length = 495 Score = 169 bits (427), Expect = 9e-42 Identities = 84/147 (57%), Positives = 107/147 (72%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T +QQADTGTKMIH GKN++S IISKGISAG S+N YRGLV++ A NA N +QCDS+ Sbjct: 349 TSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSM 408 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG A+T+P ++ S ++EHEA+TS+IGEDQLFY QRGI E A++ ++ GFC+ Sbjct: 409 LIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCK 468 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 VF LP EFA E L+ + LE SVG Sbjct: 469 DVFSELPLEFAVEAQKLLAISLEHSVG 495
>YCF24_CYACA (Q9TLX2) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 166 bits (421), Expect = 4e-41 Identities = 81/147 (55%), Positives = 110/147 (74%) Frame = -1 Query: 653 TKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSL 474 T + Q+ADTGTKM+H G+ S+S +ISKGIS G S+N YRGLV+++ A + N SQCDSL Sbjct: 337 TNNAQEADTGTKMLHFGRQSKSLVISKGISGGVSKNTYRGLVKISGSAIYSDNRSQCDSL 396 Query: 473 LIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCR 294 LIG + +NTYP + V + +VEHEA S+IGE+Q+FYFQQRGI+ E+A+ ++ GFC+ Sbjct: 397 LIGKGSESNTYPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEALNMIVSGFCQ 456 Query: 293 AVFEHLPYEFAQEVDALMNLKLEGSVG 213 V LP EFA E + L+N+KLEGS+G Sbjct: 457 DVCNKLPMEFALEANKLLNIKLEGSIG 483
>Y1496_MYCBO (P67126) Hypothetical UPF0051 protein Mb1496 [Contains: Endonuclease| PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 126 bits (317), Expect = 5e-29 Identities = 58/143 (40%), Positives = 93/143 (65%) Frame = -1 Query: 641 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGD 462 Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD+LL+ Sbjct: 704 QHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDT 763 Query: 461 KAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFE 282 + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF + + Sbjct: 764 VSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAK 823 Query: 281 HLPYEFAQEVDALMNLKLEGSVG 213 LP E+A E++ L+ L++EG+VG Sbjct: 824 ELPMEYALELNRLIELQMEGAVG 846
>Y1461_MYCTU (P67125) Hypothetical UPF0051 protein Rv1461/MT1508 [Contains:| Endonuclease PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 126 bits (317), Expect = 5e-29 Identities = 58/143 (40%), Positives = 93/143 (65%) Frame = -1 Query: 641 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGD 462 Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD+LL+ Sbjct: 704 QHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDT 763 Query: 461 KAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFE 282 + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF + + Sbjct: 764 VSRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAK 823 Query: 281 HLPYEFAQEVDALMNLKLEGSVG 213 LP E+A E++ L+ L++EG+VG Sbjct: 824 ELPMEYALELNRLIELQMEGAVG 846
>Y593_MYCLE (Q49689) Hypothetical UPF0051 protein ML0593 [Contains: Mle pps1| intein] Length = 869 Score = 126 bits (316), Expect = 6e-29 Identities = 58/143 (40%), Positives = 93/143 (65%) Frame = -1 Query: 641 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGD 462 Q DTG KM+H N+ S I+SK ++ G R YRGLVQ+N GA + +S +CD+LL+ Sbjct: 727 QHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDT 786 Query: 461 KAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFE 282 + ++TYP + + + HEA+ SK+ E+QLFY RG+ ++A+A ++ GF + + Sbjct: 787 ISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMSRGLAEDEAMAMVVRGFVEPIAK 846 Query: 281 HLPYEFAQEVDALMNLKLEGSVG 213 LP E+A E++ L+ L++EG+VG Sbjct: 847 ELPMEYALELNRLIELQMEGAVG 869
>Y1385_PYRHO (O50093) Hypothetical UPF0051 protein PH1385| Length = 446 Score = 77.8 bits (190), Expect = 3e-14 Identities = 43/137 (31%), Positives = 68/137 (49%) Frame = -1 Query: 632 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 453 D G +M +G+ R SK + +S RG + + + S CD+LL+ DKA Sbjct: 310 DLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAEAKKTKGHIS--CDALLLSDKAR 367 Query: 452 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 273 TYP + + HEA+ KI E++LFY RG+ EKA ++ GF + + +P Sbjct: 368 METYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLSEEKATQLIVKGFVEPMLKDIP 427 Query: 272 YEFAQEVDALMNLKLEG 222 EF E+ ++ L + G Sbjct: 428 IEFVVEIKKIIELAVSG 444
>Y1150_METTH (O27218) Hypothetical UPF0051 protein MTH1150| Length = 410 Score = 68.6 bits (166), Expect = 2e-11 Identities = 35/137 (25%), Positives = 68/137 (49%) Frame = -1 Query: 632 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 453 D G+++I +G+ S + ++S+ +S S+ RG + +C L++ D + Sbjct: 275 DMGSRVILEGRGSSAEMVSRAVSKDSSQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSM 332 Query: 452 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 273 P ++ T + HEA+ KI E+++ Y RG+ E+A + ++ GF LP Sbjct: 333 IYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEEEAASMIVRGFLSMDITGLP 392 Query: 272 YEFAQEVDALMNLKLEG 222 E A E ++++ L+G Sbjct: 393 PELAAETKRMLDMSLKG 409
>YB50_METTW (Q50519) Hypothetical UPF0051 protein MTH1150 homolog (ORF2)| Length = 410 Score = 67.0 bits (162), Expect = 5e-11 Identities = 34/137 (24%), Positives = 68/137 (49%) Frame = -1 Query: 632 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 453 D G+++I +G+ S + ++S+ +S S+ RG + +C L++ D + Sbjct: 275 DMGSRVILEGRGSSAEMVSRAVSKDASQIYSRG--HLAGRVPEVKGHLECHGLVLSDDSM 332 Query: 452 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 273 P ++ T + HEA+ KI E+++ Y RG+ ++A + ++ GF LP Sbjct: 333 IYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEDEAASMIVRGFLSMDITGLP 392 Query: 272 YEFAQEVDALMNLKLEG 222 E A E ++++ L+G Sbjct: 393 PELAAETKRMLDMSLKG 409
>Y2365_ARCFU (O30305) Hypothetical UPF0051 protein AF2365| Length = 369 Score = 64.3 bits (155), Expect = 3e-10 Identities = 34/120 (28%), Positives = 63/120 (52%) Frame = -1 Query: 632 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 453 D+G++ + G+NSR+ IIS+ IS G + RG + A +C L++ + Sbjct: 234 DSGSRAVLMGENSRAEIISRTISKG-GKIIARG--HIIGDAPEVKGHLECKGLMLSESGL 290 Query: 452 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 273 + P ++ + + HEA+ KI E+ +FY RG+ ++A++A++ GF + LP Sbjct: 291 IDAIPELEARYPNVELSHEAAIGKIAEEGIFYLMSRGLSRDEAISAIVRGFMEIEIKGLP 350
>SUFD_ECOLI (P77689) Protein sufD| Length = 423 Score = 58.2 bits (139), Expect = 2e-08 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%) Frame = -1 Query: 632 DTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAA 453 DT T + H SR + K I + K R + GL+ + A ++LL+G A Sbjct: 283 DTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAE 342 Query: 452 ANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLP 273 +T P +++ + H A+ +I ++Q+FY + RGI+ + A +I F + E L Sbjct: 343 VDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALR 402 Query: 272 YE-FAQEVDALMNLKLEG 222 E Q+V A + +L G Sbjct: 403 DEGLKQQVLARIGQRLPG 420
>Y076_SYNY3 (Q55792) Hypothetical UPF0051 protein slr0076| Length = 453 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/123 (21%), Positives = 57/123 (46%) Frame = -1 Query: 641 QQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGD 462 Q +DT + + + + + K I ++ + G V + A+ +L++ Sbjct: 314 QVSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSS 373 Query: 461 KAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFE 282 KA NT P +Q+ + + H A+ S++ D++FY + RG++ A +I F + + Sbjct: 374 KARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEILD 433 Query: 281 HLP 273 +P Sbjct: 434 QIP 436
>Y1497_MYCBO (P59973) Hypothetical UPF0051 protein Mb1497| Length = 397 Score = 37.4 bits (85), Expect = 0.039 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Frame = -1 Query: 647 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 489 D Q ++ + H + +S ++ KG G + + G V + + A Sbjct: 237 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFE 296 Query: 488 QCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIGEDQLFYFQQRGIDHEKAVA 318 +L++ D A A++ P +++ +G + H ++T + ++QLFY + RGI +A Sbjct: 297 VNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARR 354 Query: 317 AMIGGF 300 ++ GF Sbjct: 355 LVVRGF 360
>Y1462_MYCTU (O53153) Hypothetical UPF0051 protein Rv1462/MT1509| Length = 397 Score = 37.4 bits (85), Expect = 0.039 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 10/126 (7%) Frame = -1 Query: 647 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 489 D Q ++ + H + +S ++ KG G + + G V + + A Sbjct: 237 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIRAQATGTDTFE 296 Query: 488 QCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIGEDQLFYFQQRGIDHEKAVA 318 +L++ D A A++ P +++ +G + H ++T + ++QLFY + RGI +A Sbjct: 297 VNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFDDEQLFYLRSRGIPEAQARR 354 Query: 317 AMIGGF 300 ++ GF Sbjct: 355 LVVRGF 360
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic| receptor 180) (CD280 antigen) Length = 1480 Score = 36.6 bits (83), Expect = 0.067 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = -1 Query: 515 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 348 G E +N S C+ L I KA + T + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGTAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 347 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 219 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>Y034_METJA (Q60349) Hypothetical UPF0051 protein MJ0034| Length = 316 Score = 35.8 bits (81), Expect = 0.11 Identities = 22/101 (21%), Positives = 48/101 (47%) Frame = -1 Query: 605 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQV 426 G+N++ I S+G + S+ + +++ A + C ++ G+ A + P + V Sbjct: 214 GENAKCIIKSRGAAMDNSKISLK--LKIEGNAPYSKGHIDCAEIVKGN-AEVESIPIVVV 270 Query: 425 GCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGG 303 R+ HEA+ + + QL +G+D ++A ++ G Sbjct: 271 RDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKG 311
>Y594_MYCLE (Q49682) Hypothetical UPF0051 protein ML0594| Length = 392 Score = 35.0 bits (79), Expect = 0.20 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 8/124 (6%) Frame = -1 Query: 647 DYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRNCYRGLVQMNSGAENAYNSS 489 D Q ++ + H + +S ++ KG G + + G V ++ A Sbjct: 234 DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAHTVWVGDVLIHPEATGTDTFE 293 Query: 488 QCDSLLIGDKAAANTYPTIQVGCTS-GRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAM 312 +L++ + A++ P +++ H ++T + ++QLFY + RGI E+A + Sbjct: 294 VNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDDEQLFYLRSRGIGEEQARRLL 353 Query: 311 IGGF 300 + GF Sbjct: 354 VRGF 357
>MRC2_MOUSE (Q64449) Macrophage mannose receptor 2 precursor (Lectin lambda)| (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.25 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = -1 Query: 515 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 348 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 347 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 219 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.25 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = -1 Query: 515 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 348 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y + Sbjct: 486 GPEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEA 545 Query: 347 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 219 R + DH + + F +A L Y + E AL +L GS Sbjct: 546 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 592
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 32.7 bits (73), Expect = 0.97 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%) Frame = -1 Query: 605 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGA---ENAYNSSQCDSLLIGDKAAANTYPT 435 G+ + I+ G+ A + ++G V+ + G + + +S D +GD A T+P Sbjct: 247 GRTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVA---TFPL 303 Query: 434 IQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQE 255 G RVEH + K E + KA+ A GG +++LP+ +++ Sbjct: 304 KMYGDVR-RVEHVDHSRKSAEQAV-----------KAIKAAEGGAAVEEYDYLPFFYSRS 351 Query: 254 VD 249 D Sbjct: 352 FD 353
>Y779_LACPL (Q88YI4) UPF0042 protein lp_0779| Length = 294 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = -1 Query: 491 SQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGE 372 S +S++ G +A + TI +GCT G+ A T +IGE Sbjct: 230 SMLESIMPGYEAEGKSSLTIAIGCTGGQHRSVALTQRIGE 269
>T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box transcription| factor 3-B) (TCF-3-B) (xTcf-3) Length = 551 Score = 30.4 bits (67), Expect = 4.8 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 200 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 379 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 380 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 559 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 560 PLRYPWI*SGCVNSSPCGSSLS 625 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>T7L1A_XENLA (P70062) Transcription factor 7-like 1-A (HMG box transcription| factor 3-A) (TCF-3-A) (xTcf-3) Length = 554 Score = 30.4 bits (67), Expect = 4.8 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 200 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 379 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 380 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 559 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPPQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 560 PLRYPWI*SGCVNSSPCGSSLS 625 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box transcription| factor 3-D) (TCF-3-D) (xTcf-3d) Length = 550 Score = 30.4 bits (67), Expect = 4.8 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = +2 Query: 200 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 379 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 176 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 226 Query: 380 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 559 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 227 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 280 Query: 560 PLRYPWI*SGCVNSSPCGSSLS 625 + +P I S V P ++S Sbjct: 281 GIPHPAIVSPIVKQEPSSGNIS 302
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 30.4 bits (67), Expect = 4.8 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 261 PGGGCTYEPEAGGISWLSSW 202 PGGG TY P GG++W+ W Sbjct: 318 PGGGVTYTP--GGLAWIRQW 335
>NEUV_CHICK (P24787) Vasotocin-neurophysin VT precursor [Contains: Vasotocin| (VT); Neurophysin VT] Length = 161 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = -1 Query: 605 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDS 477 G +R R GI G CY G + AE Y S C + Sbjct: 45 GPGNRGRCFGPGICCGAELGCYLGTAETRRCAEEDYMPSPCQA 87
>HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg| Length = 2896 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 71 VHLSCNLFFSVSYCCCTHGHMDFLDDHRMV 160 + LSC+ +Y CC HG + F + HR++ Sbjct: 2545 IPLSCHYENGTAYACCQHGMVTFPNWHRLL 2574
>HCYA_OCTDO (P12659) Hemocyanin A-type, units Ode to Odg (Fragment)| Length = 1233 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 71 VHLSCNLFFSVSYCCCTHGHMDFLDDHRMV 160 + LSC+ +Y CC HG + F + HR++ Sbjct: 882 IPLSCHYENGTAYACCQHGMVTFPNWHRLL 911 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,805,312 Number of Sequences: 219361 Number of extensions: 2393499 Number of successful extensions: 5275 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5270 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
