ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd23o01 |
|---|---|
| Clone Library Name | barley_pub |
>DHB4_HUMAN (P51659) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5 Length = 735 Score = 133 bits (334), Expect = 4e-31 Identities = 63/118 (53%), Positives = 81/118 (68%) Frame = -3 Query: 521 ISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA 342 ++IPN P AV D T +QA LYRLSGD+NPLH DP A +AGF +PILHGLCT GF+A Sbjct: 481 VAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSA 540 Query: 341 RAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLS 168 R V++ F + D + + I RF VYPG+TL TEMW +G R+ +QTK +E V+S Sbjct: 541 RRVLQQFADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIVIS 598
>DHB4_MOUSE (P51660) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5 Length = 734 Score = 132 bits (332), Expect = 7e-31 Identities = 63/118 (53%), Positives = 80/118 (67%) Frame = -3 Query: 521 ISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA 342 +++PN P AV D T +QA LYRLSGD+NPLH DP A VAGF +PILHGLCT GF+A Sbjct: 480 VAVPNRPPDAVLRDATSLNQAALYRLSGDWNPLHIDPDFASVAGFEKPILHGLCTFGFSA 539 Query: 341 RAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLS 168 R V++ F + D + + I RF VYPG+TL TEMW +G R+ +QTK E V+S Sbjct: 540 RHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVHETGDVVIS 597
>DHB4_RAT (P97852) Peroxisomal multifunctional enzyme type 2 (MFE-2)| (D-bifunctional protein) (DBP) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) [Includes: D-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.107) (3-alpha,7-alpha,12-alpha-trihydroxy-5-b Length = 734 Score = 129 bits (325), Expect = 5e-30 Identities = 61/118 (51%), Positives = 80/118 (67%) Frame = -3 Query: 521 ISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA 342 +++P+ P AV D T +QA LYRLSGD NPLH DP A +AGF +PILHGLCT GF+A Sbjct: 480 VAVPSRPPDAVLRDTTSLNQAALYRLSGDSNPLHIDPSFASIAGFEKPILHGLCTFGFSA 539 Query: 341 RAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLS 168 R V++ F + D + + I RF VYPG+TL TEMW +G R+ +QTK +E V+S Sbjct: 540 RHVLQQFADNDVSRFKAIKVRFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIVIS 597
>FOX2_NEUCR (Q01373) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 894 Score = 117 bits (294), Expect = 2e-26 Identities = 60/116 (51%), Positives = 75/116 (64%) Frame = -3 Query: 512 PNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAV 333 P +P AV E QT + QA +YRLSGDYNPLH DP A+V GF PILHGLC+ G A +AV Sbjct: 778 PARSPDAVVEVQTTEEQAAIYRLSGDYNPLHVDPAFAKVGGFKVPILHGLCSFGIAGKAV 837 Query: 332 IKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSG 165 + + +NI RF V PG+TLVTEMW +G +V +QTK KE + +SG Sbjct: 838 YEKY-----GKFKNIKVRFAGTVNPGQTLVTEMWKEGNKVVFQTKVKETGKLAISG 888
>FOX2_YEAST (Q02207) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 900 Score = 88.2 bits (217), Expect = 2e-17 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Frame = -3 Query: 530 ISRISIPNS-APSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTL 354 + +P+ P E T + QA LYRLSGD+NPLH DP +A+ F PILHGLCTL Sbjct: 771 VQNFEVPHGKVPDFEAEISTNKDQAALYRLSGDFNPLHIDPTLAKAVKFPTPILHGLCTL 830 Query: 353 GFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAV 174 G +A+A+ + + + + RF V+PG+TL + W G V +QT R+ V Sbjct: 831 GISAKALFEHY-----GPYEELKVRFTNVVFPGDTLKVKAWKQGSVVVFQTIDTTRNVIV 885 Query: 173 LSGYVLLKQHIPSSL 129 L + S L Sbjct: 886 LDNAAVKLSQAKSKL 900
>FOX2_CANTR (P22414) Peroxisomal hydratase-dehydrogenase-epimerase (HDE)| (Multifunctional beta-oxidation protein) (MFP) [Includes: 2-enoyl-CoA hydratase (EC 4.2.1.-); D-3-hydroxyacyl CoA dehydrogenase (EC 1.1.1.-)] Length = 906 Score = 81.6 bits (200), Expect = 1e-15 Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Frame = -3 Query: 554 YTTYPANQISRISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPI 375 Y PA ++ P AP + + A LYRLSGD NPLH DP A+ A F +PI Sbjct: 769 YADRPAFATNQFLAPKRAPDYQVDVPVSEDLAALYRLSGDRNPLHIDPNFAKGAKFPKPI 828 Query: 374 LHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEMWVDG-QRVQYQTK 198 LHG+CT G +A+A+I F I RF V+PGETL W + + +QT Sbjct: 829 LHGMCTYGLSAKALIDKF-----GMFNEIKARFTGIVFPGETLRVLAWKESDDTIVFQTH 883 Query: 197 AKER 186 +R Sbjct: 884 VVDR 887
>FAS1_YEAST (P07149) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2051 Score = 43.5 bits (101), Expect = 4e-04 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 6/134 (4%) Frame = -3 Query: 524 RISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFA 345 ++++ N P AV + T + R+SGD NP+H A A I HG+ + + Sbjct: 1530 KVNLENPIPIAVLDSYTPSTNEPYARVSGDLNPIHVSRHFASYANLPGTITHGMFS-SAS 1588 Query: 344 ARAVIKSF-CNGDPAAVQNIFGRFLLHVYPGETLVTEM----WVDGQR-VQYQTKAKERD 183 RA+I+++ + + V+ +F+ V P L T + ++G++ ++++T+ E D Sbjct: 1589 VRALIENWAADSVSSRVRGYTCQFVDMVLPNTALKTSIQHVGMINGRKLIKFETR-NEDD 1647 Query: 182 RAVLSGYVLLKQHI 141 VL+G ++Q + Sbjct: 1648 VVVLTGEAEIEQPV 1661
>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.3 Length = 2080 Score = 43.1 bits (100), Expect = 6e-04 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Frame = -3 Query: 554 YTTYPANQIS---RISIPNSAPSAVYEDQTQQSQALLYRLSGDYNPLHSDPMVAQVAGFA 384 Y +Y N + +S+PN+ S V S R SGD NP+H A+ AG Sbjct: 1537 YGSYSQNSVDFEDPVSVPNNGESLVI--CAPSSNEAYARTSGDLNPIHVSRTFAEYAGLP 1594 Query: 383 RPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFLLHVYPGETLVTEM----WVDGQ- 219 I HG+ V + +G+ ++ F+ V P + L ++ V+G Sbjct: 1595 GLITHGMYCSAAIQDLVERLVADGNAGRIRQFSMSFVGMVLPNQKLEVKLEHIGMVEGMI 1654 Query: 218 RVQYQTKAKERDRAVLSGYVLLKQ 147 R+ + +A+E V+ G + Q Sbjct: 1655 RLHIEARAQETGHRVIVGEAKITQ 1678
>FAS1_CANAL (P34731) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2037 Score = 39.7 bits (91), Expect = 0.006 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFG-RFLL 270 +SGDYNP+H + A A I HG+ + + RA+++ + + AA F F+ Sbjct: 1542 VSGDYNPIHVSRVFAAYAKLPGTITHGMYS-SASIRALVEEWAANNVAARVRAFKCDFVG 1600 Query: 269 HVYPGETLVTEM----WVDGQR-VQYQTKAKERDRAVLSGYVLLKQ 147 V P +TL T M ++G++ ++ +T+ E + VL G ++Q Sbjct: 1601 MVLPNDTLQTTMEHVGMINGRKIIKVETRNVETELPVLIGEAEIEQ 1646
>FAS1_YARLI (P34229) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2086 Score = 37.7 bits (86), Expect = 0.024 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSF-CNGDPAAVQNIFGRFLL 270 +SGDYNP+H A A I HG+ + A R++I+ + + + V+ +F Sbjct: 1587 VSGDYNPIHVSRAFASYASLPGTITHGMYS-SAAVRSLIEVWAAENNVSRVRAFSCQFQG 1645 Query: 269 HVYPGETLVTEM----WVDGQRVQYQTKA-KERDRAVLSGYVLLKQHI 141 V P + +VT + ++G+++ T +E + VLSG ++Q I Sbjct: 1646 MVLPNDEIVTRLEHVGMINGRKIIKVTSTNRETEAVVLSGEAEVEQPI 1693
>FAS1_SCHPO (Q9UUG0) Fatty acid synthase beta subunit (EC 2.3.1.86) [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2. Length = 2073 Score = 37.4 bits (85), Expect = 0.031 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGF--ARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFGRFL 273 +SGDYNP+H P A I HG+ T A R V P V++ F+ Sbjct: 1572 VSGDYNPIHVSPTFAAFVELPGTHGITHGMYTSAAARRFVETYAAQNVPERVKHYEVTFV 1631 Query: 272 LHVYPGETLVTEM----WVDGQR-VQYQTKAKERDRAVLSGYVLLKQHI 141 V P L+T++ ++G++ ++ + +E VL G ++Q + Sbjct: 1632 NMVLPNTELITKLSHTGMINGRKIIKVEVLNQETSEPVLVGTAEVEQPV 1680
>STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty acid synthase| beta subunit Length = 1914 Score = 36.2 bits (82), Expect = 0.069 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGFARPILHGL 363 +SGD NP+H P+ ++ AG +P++HGL Sbjct: 1439 VSGDTNPIHVCPLFSRFAGLGQPVVHGL 1466
>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)| Length = 2570 Score = 35.4 bits (80), Expect = 0.12 Identities = 37/145 (25%), Positives = 51/145 (35%), Gaps = 32/145 (22%) Frame = -1 Query: 424 CIQTLWLHRL----QGSPVRYCTA--SAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTS 263 C+ T W GS + C S+P R V S +G Q LCR+ AG+ C Sbjct: 1950 CVTTTWKPSCCPGHYGSECQACPGGPSSPCSDRGVCMDGMSGSG-QCLCRSGFAGTACEL 2008 Query: 262 TPAKRWSPRC----------------GSMARGCS---TRPR-------RKSATAPCSPDT 161 + P C GS + C T PR + T PC+P+ Sbjct: 2009 CAPGAFGPHCQACRCTVHGRCDEGLGGSGSCFCDEGWTGPRCEVQLELQPVCTPPCAPEA 2068 Query: 160 CCSNNTSPHHCKCRCVIRTIGEICS 86 C S C+C G +C+ Sbjct: 2069 VCRAGNS---CECSLGYEGDGRVCT 2090
>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) (M-Delta-3) Length = 592 Score = 35.0 bits (79), Expect = 0.15 Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Frame = -1 Query: 379 RYCTASAPWGSRPVRSSSRSATGIQRL-CRTYLAGSCCTSTPAKRWSP-RCGSMARGCST 206 R A PW R+ + R C G+ C R +P RCG R C+ Sbjct: 148 RRLAAGGPWARDVQRTGTWELHFSYRARCEPPAVGAACARLCRSRSAPSRCGPGLRPCTP 207 Query: 205 RPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 86 P A + C P + +CRC+ G +C+ Sbjct: 208 FPDECEAPSVCRPGCSPEHGYCEEPDECRCLEGWTGPLCT 247
>Y2081_STRCO (P45497) UPF0124 protein SCO2081| Length = 242 Score = 34.7 bits (78), Expect = 0.20 Identities = 27/110 (24%), Positives = 39/110 (35%) Frame = -1 Query: 418 QTLWLHRLQGSPVRYCTASAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTSTPAKRWSP 239 + +W++++ G+ V APWG RPV T + L L C P P Sbjct: 60 RVVWMNQVHGADV--AVVDAPWGDRPVPRVDAVVTAERGLALAVLTADC---VPVLLADP 114 Query: 238 RCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEIC 89 G A + RP + P + P R V RT +C Sbjct: 115 VSGVAAAAHAGRPGLVAGVVPAAVRAMAELGADP----ARIVARTGPAVC 160
>MAOC_KLEAE (P49251) Protein maoC| Length = 335 Score = 34.7 bits (78), Expect = 0.20 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 8/102 (7%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAA--------RAVIKSFCNGDPAAVQN 291 LSGD+ H D + A + F ++HG + AA R VI ++ ++N Sbjct: 225 LSGDHFYAHMDKIAAAESIFGERVVHGYFLISAAAGLFVDAGVRPVIANY------GMEN 278 Query: 290 IFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSG 165 + RF+ V PG+T+ + + V++Q A E+ A +G Sbjct: 279 L--RFIEPVKPGDTIQVRLTCKRKTVKHQRSADEKAPAWWNG 318
>MAOC_ECOLI (P77455) Protein maoC (Phenylacetic acid degradation protein paaZ)| Length = 681 Score = 34.3 bits (77), Expect = 0.26 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Frame = -3 Query: 446 LSGDYNPLHSDPMVAQVAGFARPILHGLCTLGFAARAVIKSFCNGDPAAVQNIFG----R 279 LSGD+ H D + A + F ++HG L AA + + G + N +G R Sbjct: 558 LSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDA---GVGPVIAN-YGLESLR 613 Query: 278 FLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAVLSGYV-LLKQH 144 F+ V PG+T+ + + ++ Q A+E+ V+ V + QH Sbjct: 614 FIEPVKPGDTIQVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQH 659
>EMR2_HUMAN (Q9UHX3) EGF-like module-containing mucin-like hormone| receptor-like 2 precursor (EGF-like module EMR2) (CD312 antigen) Length = 823 Score = 33.1 bits (74), Expect = 0.58 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Frame = -1 Query: 304 RLCRTYLAGSC--------CTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 149 RLC++Y G+C C P + P + C+ S PC T C N Sbjct: 128 RLCKSY--GTCVNTLGSYTCQCLPGFKLKPEDPKL---CTDVNECTSGQNPCHSSTHCLN 182 Query: 148 NTSPHHCKCR 119 N + C+CR Sbjct: 183 NVGSYQCRCR 192
>CD97_HUMAN (P48960) CD97 antigen precursor (Leukocyte antigen CD97)| Length = 835 Score = 33.1 bits (74), Expect = 0.58 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Frame = -1 Query: 304 RLCRTYLAGSC--------CTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSN 149 RLC++Y G+C C P ++ P + C+ S PC T C N Sbjct: 125 RLCKSY--GTCVNTLGSYTCQCLPGFKFIPEDPKV---CTDVNECTSGQNPCHSSTHCLN 179 Query: 148 NTSPHHCKCR 119 N + C+CR Sbjct: 180 NVGSYQCRCR 189
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 277 SCCTSTPAKRWSPRCGSMARGC-STRPRRKSATAPCSPDTCCSNNTSPHHCKCRC 116 +C S+ KR CG GC S + S PC CCS+ C+C C Sbjct: 51 ACSCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPC----CCSSGCGSSCCQCSC 101 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/61 (26%), Positives = 22/61 (36%) Frame = -1 Query: 298 CRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCR 119 C + SCC + K + +C CS+ R S C +CC S C Sbjct: 88 CSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSS----CCQSSCCKPCCSSSGCGSS 143 Query: 118 C 116 C Sbjct: 144 C 144
>ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-cardio-facial| syndrome Length = 962 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -1 Query: 325 RSATGIQRLCRTYLA-GSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTC 158 R + L R YL+ G P R SP GS++RG RP R P D C Sbjct: 170 RGGGPVATLSRAYLSSGGGFPEGPEPRDSPSYGSLSRGLGMRPPRAGPLGPGPGDGC 226
>VE2_HPV24 (P50770) Regulatory protein E2| Length = 467 Score = 31.2 bits (69), Expect = 2.2 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = -1 Query: 379 RYCTASAPWGSRPVRSSSRS-ATGIQRLCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTR 203 R C P G R V +SSR G +R S +S+P +PR + RGC TR Sbjct: 300 RRCRGDTPRGQRGVSTSSRGRGRGSRR--------SSSSSSP----TPRTKASQRGCDTR 347 Query: 202 PRRKSATAP 176 R S +P Sbjct: 348 SVRDSGISP 356
>DPO4_BACCR (Q818U9) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 415 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +1 Query: 295 CTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIGSECK 426 C A GSPL+ M +A +Q PCSIG A A S+ K Sbjct: 124 CYALGSPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMK 167
>CSMD2_HUMAN (Q7Z408) CUB and sushi domain-containing protein 2 (CUB and sushi| multiple domains protein 2) Length = 3487 Score = 30.8 bits (68), Expect = 2.9 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Frame = -1 Query: 397 LQGSPVRYCTASAPW-GSRPVRSSSRSAT---------GIQRLCRTYLAGSCCTSTPAKR 248 L GSP R+C + W G++P T GIQ + Y GS K Sbjct: 3102 LVGSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGVPQFGIQNNSQGYQVGSTVLFRCQK- 3160 Query: 247 WSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCK 125 G + +G +TR + T +P C PHHC+ Sbjct: 3161 -----GYLLQGSTTRTCLPNLTWSGTPPDCV-----PHHCR 3191
>DPO4_BACAN (Q81M86) DNA polymerase IV (EC 2.7.7.7) (Pol IV)| Length = 412 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +1 Query: 295 CTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIGSECK 426 C A GSPL+ M +A +Q PCSIG A A S+ K Sbjct: 121 CYALGSPLEIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMK 164
>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 466 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 283 PNMFCTAAGSPLQNDLMTARAANPRVQRPCSIGRANPATCATIG 414 P ++ A G P + + R PR+ + IG A PA AT+G Sbjct: 352 PRIYWIAGGLPKEGGIEPLRGFFPRIAKAYLIGEAAPAFSATLG 395
>MT23B_MYTED (P80258) Metallothionein 20-III isoform B (MT-20-IIIB)| Length = 71 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 301 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 122 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPTNCKC 64
>CELR3_RAT (O88278) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Multiple epidermal growth factor-like domains 2) Length = 3313 Score = 30.4 bits (67), Expect = 3.8 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Frame = -1 Query: 271 CTSTPAKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 113 C K + P C + C RPR + PC P S + +PH +C C Sbjct: 2031 CNCDVHKGFDPNCNKTSGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2090 Query: 112 IRTIGEICS 86 +G C+ Sbjct: 2091 PGALGRQCN 2099
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 30.4 bits (67), Expect = 3.8 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Frame = -1 Query: 295 RTYLAGSCCTSTPAKRWSPRC------GSMARGCSTRPRRKSATAPCSPDT----CCSNN 146 R A CT P R + RC GS C+ R PCSPDT C Sbjct: 229 RCSAASGECTCPPGFRGA-RCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPG 287 Query: 145 TSPHHCKCRCVIRTIGEIC 89 + C+ C+ T GE C Sbjct: 288 WNGTQCQQPCLPGTFGESC 306
>MRAZ_NOCFA (Q5YYY8) Protein mraZ| Length = 143 Score = 30.4 bits (67), Expect = 3.8 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = +1 Query: 310 SPLQNDLMTARAANPRVQRPCSIGR----ANPATCATIGSECKGL*SPDNLYKSAWDCCV 477 +P + A AA QRP + GR A+ A + +C + S D L WD Sbjct: 62 NPQARAFVRALAAGTDEQRPDAQGRITLSADHRRYANLSRDCVVIGSVDFL--EIWDKQA 119 Query: 478 WSSYTAEGAEFGIEMREIWLAG 543 W SY AE E + R+ L G Sbjct: 120 WESYLAEHEEDYAQARDESLGG 141
>YCR2_ENTAG (Q01336) Hypothetical protein in crtE 3'region (ORF2) (Fragment)| Length = 529 Score = 30.4 bits (67), Expect = 3.8 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -3 Query: 317 NGDPAAVQNIFGRFLLHVYPGETLVTEMWVDGQRVQYQTKAKERDRAV 174 NG+ +AV N+ G+ + GE L+ EMW V K +D+ V Sbjct: 68 NGNISAVLNLKGQLAFYNQRGELLLEEMWRQRSTVGIGASEKSQDKYV 115
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 30.4 bits (67), Expect = 3.8 Identities = 22/90 (24%), Positives = 32/90 (35%) Frame = -1 Query: 427 PCIQTLWLHRLQGSPVRYCTASAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTSTPAKR 248 PC + G+ C S+ + S RS++ + LC +CC P+ Sbjct: 265 PCQHACCVPVCSGASTSCCQQSSCQPACCTASCCRSSSSVSLLCHPVCKSTCCVPVPS-- 322 Query: 247 WSPRCGSMARGCSTRPRRKSATAPCSPDTC 158 CG+ A C R TA C C Sbjct: 323 ----CGASASSCQPSCCR---TASCVSLLC 345
>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)| Length = 319 Score = 30.4 bits (67), Expect = 3.8 Identities = 37/148 (25%), Positives = 55/148 (37%), Gaps = 18/148 (12%) Frame = -1 Query: 475 HNNPRHSYTGYLGIII-------PCIQTLWLHRLQGSPVRYCTASAPWG-------SRPV 338 +NN H +T +LG + P + S +AS+ G +RPV Sbjct: 86 NNNYEHRHTSHLGHAVLPSNARGPILSRSTSTGSAASSGSNSSASSEQGLLGRSPPTRPV 145 Query: 337 ---RSSSRSATGIQRLCRTYLAGSCCTS-TPAKRWSPRCGSMARGCSTRPRRKSATAPCS 170 RS T ++L L GS T K +CG G T PR + C+ Sbjct: 146 PGHRSERAIRTQPKQLIVDDLKGSLKEDLTQHKFICEQCGKCKCGECTAPRTLPSCLACN 205 Query: 169 PDTCCSNNTSPHHCKCRCVIRTIGEICS 86 CS + + C C+++ I CS Sbjct: 206 RQCLCSAESMVEYGTCMCLVKGIFYHCS 233
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 138 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFAGVDVQQEPAKY 290 GD+ +F +H+S + ALF L +++P DP + D GV + + Y Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +3 Query: 138 GDV-LFEQHVSGEHGAVALFRLGLVLHPLAIDPHLGDQRFAGVDVQQEPAKY 290 GD+ +F +H+S + ALF L +++P DP + D GV + + Y Sbjct: 224 GDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSY 275
>MT23A_MYTGA (P69154) Metallothionein 20-III isoform A (MT-20-IIIA) (MT-I)| Length = 71 Score = 30.0 bits (66), Expect = 4.9 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 301 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 122 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPINCKC 64
>MT23A_MYTED (P69153) Metallothionein 20-III isoform A (MT-20-IIIA)| Length = 71 Score = 30.0 bits (66), Expect = 4.9 Identities = 20/60 (33%), Positives = 25/60 (41%) Frame = -1 Query: 301 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 122 +C T +G CC A + + CG GC R S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCQCGDACKCASGCG--CSGCKV-VCRCSGTCACGCDC-----TGPINCKC 64
>NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor| Length = 2703 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/70 (22%), Positives = 25/70 (35%) Frame = -1 Query: 292 TYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCV 113 T L G C + ++ C + G + A++PC C+ C C Sbjct: 147 TCLNGGTCQLKTLEEYTCACANGYTGERCETKNLCASSPCRNGATCTALAGSSSFTCSCP 206 Query: 112 IRTIGEICSY 83 G+ CSY Sbjct: 207 PGFTGDTCSY 216
>FX4L4_HUMAN (Q8WXT5) Forkhead box protein D4-like 4 (Forkhead box protein D4B)| (Myeloid factor-gamma) Length = 416 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%) Frame = -1 Query: 202 PRRKSATAPCS--PDTCCSNNTSPHHCKCRCVIRTIGEICSYXXXXXXVNRGV*KRPVAR 29 PR + ATA CS CC P CKC + +G+ CS P AR Sbjct: 346 PRPRGATATCSSDHQACCIPKPLPLCCKCPPPL-LLGQFCSNSSSIRRTAPTAALPPRAR 404 Query: 28 C 26 C Sbjct: 405 C 405
>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| Length = 3301 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Frame = -1 Query: 271 CTSTPAKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 113 C K + P C C RPR + PC P S + +PH +C C Sbjct: 2029 CNCDVHKGFDPNCNKTNGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2088 Query: 112 IRTIGEICS 86 +G C+ Sbjct: 2089 PGALGRQCN 2097
>Y303_ARCFU (O29939) Hypothetical protein AF0303| Length = 397 Score = 29.3 bits (64), Expect = 8.4 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%) Frame = +3 Query: 144 VLFEQHVSGEHGAVALF-----------RLGLVLHPLAIDPHLGDQRFAGVDVQQEPAKY 290 VLF+ +S E+ ++ +F R + LHP DP GD V ++ E + Sbjct: 277 VLFQHPISNENRSIIVFNEIYIPQNAKLRFSIALHPDVWDPEKGDGVTFEVYIRDEGFEE 336 Query: 291 VLHSRWIPVAERLDDR 338 ++ S++I ++R Sbjct: 337 LVFSKYIDPKHNPEER 352
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Frame = -1 Query: 271 CTSTPAKRWSPRCGSMARGCST-----RPRRKSATAPCS--PDTCCSNNTSPHHCKCRCV 113 C K + P C C RPR + PC P S + +PH +C C Sbjct: 2040 CNCDVHKGFDPNCNKTNGQCHCKEFHYRPRGSDSCLPCDCYPVGSTSRSCAPHSGQCPCR 2099 Query: 112 IRTIGEICS 86 +G C+ Sbjct: 2100 PGALGRQCN 2108
>MT22_MYTED (P80252) Metallothionein 20-II (MT-20-II)| Length = 71 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Frame = -1 Query: 301 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCS-NNTSPHHCK 125 +C T +G CC A + + CG GC CS C + T P +CK Sbjct: 13 ICGTGCSGKCCRCGDACKCASGCG--CSGC-------KVVCKCSGTCACGCDCTGPTNCK 63 Query: 124 C 122 C Sbjct: 64 C 64
>MT21_MYTED (P80251) Metallothionein 20-I isoforms A and B (MT-20-IA and| MT-20-IB) Length = 71 Score = 29.3 bits (64), Expect = 8.4 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -1 Query: 301 LCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKC 122 +C T +G CC A + + CG GC + S T C D T P +CKC Sbjct: 13 ICGTGCSGKCCRCGDACKCASGCG--CSGCKV-VCKCSGTCKCGCDC-----TGPTNCKC 64
>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog| 4) Length = 686 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 1/87 (1%) Frame = -1 Query: 340 VRSSSRSATGIQRLCRTYLAGSCCTSTPAKRWSPRCGSMARGCSTRPRRKS-ATAPCSPD 164 + +RS C G CT PA G R C R + A+ PC Sbjct: 442 ISDCARSPCAHGGTCHDLENGPVCTC-PA-------GFSGRRCEVRITHDACASGPCFNG 493 Query: 163 TCCSNNTSPHHCKCRCVIRTIGEICSY 83 C SP++ C C +G C + Sbjct: 494 ATCYTGLSPNNFVCNCPYGFVGSRCEF 520
>EPHB4_HUMAN (P54760) Ephrin type-B receptor 4 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor HTK) Length = 987 Score = 29.3 bits (64), Expect = 8.4 Identities = 23/90 (25%), Positives = 31/90 (34%) Frame = -1 Query: 388 SPVRYCTASAPWGSRPVRSSSRSATGIQRLCRTYLAGSCCTSTPAKRWSPRCGSMARGCS 209 SP YC W +PV TG SC A + +C + A+G Sbjct: 234 SPSLYCREDGQWAEQPV-------TGC----------SCAPGFEAAEGNTKCRACAQGTF 276 Query: 208 TRPRRKSATAPCSPDTCCSNNTSPHHCKCR 119 + + PC P SN C+CR Sbjct: 277 KPLSGEGSCQPC-PANSHSNTIGSAVCQCR 305
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 29.3 bits (64), Expect = 8.4 Identities = 14/51 (27%), Positives = 21/51 (41%) Frame = -1 Query: 238 RCGSMARGCSTRPRRKSATAPCSPDTCCSNNTSPHHCKCRCVIRTIGEICS 86 +CG G T PR + C CS + + C C+++ I CS Sbjct: 177 QCGKCKCGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVKGIFYHCS 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,699,485 Number of Sequences: 219361 Number of extensions: 2183841 Number of successful extensions: 6990 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 6300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6962 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
