| Clone Name | rbasd23j13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chr... | 40 | 3.5 | 2 | gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, comple... | 40 | 3.5 | 3 | ref|XM_243652.3| PREDICTED: Rattus norvegicus plexin B2 (predict... | 40 | 3.5 | 4 | gb|AC007639.5|AC007639 Homo sapiens chromosome 17, clone hRPK.57... | 40 | 3.5 |
|---|
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1 Contains a novel gene, complete sequence Length = 186246 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ttcacaggaaaaatatgttc 64 |||||||||||||||||||| Sbjct: 176726 ttcacaggaaaaatatgttc 176745
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aggtgtgattcacaggaaaa 56 |||||||||||||||||||| Sbjct: 3852 aggtgtgattcacaggaaaa 3871
>ref|XM_243652.3| PREDICTED: Rattus norvegicus plexin B2 (predicted) (Plxnb2_predicted), mRNA Length = 5799 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctgaagacactgggactgga 164 |||||||||||||||||||| Sbjct: 145 ctgaagacactgggactgga 164
>gb|AC007639.5|AC007639 Homo sapiens chromosome 17, clone hRPK.57_A_1, complete sequence Length = 94205 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 taatcatcatgggtacaata 94 |||||||||||||||||||| Sbjct: 40592 taatcatcatgggtacaata 40573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,778,725 Number of Sequences: 3902068 Number of extensions: 1778725 Number of successful extensions: 29071 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29066 Number of HSP's gapped (non-prelim): 5 length of query: 268 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 246 effective length of database: 17,147,199,772 effective search space: 4218211143912 effective search space used: 4218211143912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)