ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23e23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INVO_TARBA (P24711) Involucrin 32 2.8
2PRP5_HUMAN (P04281) Basic proline-rich peptide IB-1 30 8.0

>INVO_TARBA (P24711) Involucrin|
          Length = 387

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -3

Query: 731 KRINXQQIQKQVWDSRAPNLVAGEKQQEP-KVTVPNGVNGEK--QQDAINGKPKSPVANG 561
           K++  Q+ + Q  D + P L  G KQQEP +  V  G   +K  +Q+A  GK + P    
Sbjct: 61  KQVPEQECEPQQQDHQEPELQLGRKQQEPQEQEVHPGKQQQKPQEQEAHLGKKQEPQGQE 120

Query: 560 VNGG 549
           V+ G
Sbjct: 121 VHLG 124



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>PRP5_HUMAN (P04281) Basic proline-rich peptide IB-1|
          Length = 96

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 716 QQIQKQVWDSRAPNLVAGEKQQEPKVTVPNGVNGEKQQDAINGKPKSPVANGVN 555
           Q + + V    +P+L+AG  Q  P    P G N  +   +  GKP+ P   G N
Sbjct: 1   QNLNEDVSQEESPSLIAGNPQGAP----PQGGNKPQGPPSPPGKPQGPPPQGGN 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,337,700
Number of Sequences: 219361
Number of extensions: 1460521
Number of successful extensions: 4066
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4065
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7932903580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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