ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23e17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BXA2_CLOBO (Q45894) Botulinum neurotoxin type A precursor (EC 3.... 31 4.5
2ZP3_MOUSE (P10761) Zona pellucida sperm-binding protein 3 precur... 30 5.8
3MURC_PARUW (Q6MBS8) UDP-N-acetylmuramate--L-alanine ligase (EC 6... 30 7.6
4TYRP1_AMBME (P55027) 5,6-dihydroxyindole-2-carboxylic acid oxida... 30 10.0
5CYSJ_BLOFL (Q7VQH2) Sulfite reductase [NADPH] flavoprotein alpha... 30 10.0

>BXA2_CLOBO (Q45894) Botulinum neurotoxin type A precursor (EC 3.4.24.69)|
            (BoNT/A) (Bontoxilysin A) (BOTOX) [Contains: Botulinum
            neurotoxin A light-chain; Botulinum neurotoxin A
            heavy-chain]
          Length = 1295

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 701  DVWQLQESLAPKTADPQGLWQRCKQNYASCNSNQLQFL 588
            DV  L + +  K+ D QG+  +CK N    N N + F+
Sbjct: 1212 DVGNLSQVVVMKSKDDQGIRNKCKMNLQDNNGNDIGFI 1249



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>ZP3_MOUSE (P10761) Zona pellucida sperm-binding protein 3 precursor (Zona|
           pellucida glycoprotein ZP3) (Sperm receptor) (Zona
           pellucida protein C)
          Length = 424

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 19/75 (25%), Positives = 31/75 (41%)
 Frame = +2

Query: 482 CLSLWQWAKHELINTPFCPDAEKPFTALSISFLSHLETEVDCYYKTRNSACIFAIDLGDQ 661
           C S  Q  K  L+ + F     +P + LSI   + +E  ++C Y  + +     I    Q
Sbjct: 98  CSSRVQMTKDALVYSTFLLHDPRPVSGLSILRTNRVEVPIECRYPRQGNVSSHPI----Q 153

Query: 662 PFWEPNSLEAATRHK 706
           P W P     ++  K
Sbjct: 154 PTWVPFRATVSSEEK 168



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>MURC_PARUW (Q6MBS8) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 454

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -2

Query: 467 RATLLVLATRESQKRSVTGSSRGATPSTPTVRTLATAHAITLCSRGGI 324
           RA LL L TR+ +  +VTG+    T S+    TL  A+  +  + GGI
Sbjct: 91  RAELLALLTRQKKSLAVTGTHGKTTTSSLLATTLLEANCDSSFAVGGI 138



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>TYRP1_AMBME (P55027) 5,6-dihydroxyindole-2-carboxylic acid oxidase precursor|
           (EC 1.14.18.-) (DHICA oxidase) (Tyrosinase-related
           protein 1) (TRP-1) (TRP1)
          Length = 534

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -2

Query: 401 GATPSTPTVRTLATAHAITLCSRGGIFNTIISFDTSS*CAENPMSGYNQ-KGRY 243
           G   + P V+ L     + LC   G+F+T   +  SS    N + GY++  G+Y
Sbjct: 316 GGNVARPMVQRLPEPQDVALCLEVGLFDTPPFYSNSSESFRNTVEGYSEPSGKY 369



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>CYSJ_BLOFL (Q7VQH2) Sulfite reductase [NADPH] flavoprotein alpha-component (EC|
           1.8.1.2) (SIR-FP)
          Length = 610

 Score = 29.6 bits (65), Expect = 10.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 244 IDRRRWVQVCGLPGVHHLRYDMIGQGLARKSGKAL 140
           ++R++      L  VHHL +D+ G GL  + G AL
Sbjct: 251 LNRQKITSCNSLKDVHHLEFDISGSGLCYQPGDAL 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,285,003
Number of Sequences: 219361
Number of extensions: 2423479
Number of successful extensions: 6627
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6627
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7536258401
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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