>NOG1_ARATH (Q9C6I8) Probable nucleolar GTP-binding protein 1|
          Length = 671

 Score =  133 bits (334), Expect = 6e-31
 Identities = 73/137 (53%), Positives = 90/137 (65%), Gaps = 8/137 (5%)
 Frame = -3

Query: 689 RMGRQLTSMGVDPTAAVNRLRSQSRGRKRERSLSRADGDNAMDVDGQHXXX--------X 534
           RMGR+L++MG+DP++A++R RS+SRGRKR+RS     G++AMDVD +             
Sbjct: 537 RMGRELSAMGLDPSSAMDRARSKSRGRKRDRSEDA--GNDAMDVDDEQQSNKKQRVRSKS 594

Query: 533 XXXXXXXXXXXRPIEEVVPGDGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLK 354
                       P  EVVPG+G +D  QK  AIK S  S K R+K ARRGEADRVIPTL+
Sbjct: 595 RAMSISRSQSRPPAHEVVPGEGFKDSTQKLSAIKISNKSHKKRDKNARRGEADRVIPTLR 654

Query: 353 PKHLFSGKRGIGKTSRR 303
           PKHLFSGKRG GKT RR
Sbjct: 655 PKHLFSGKRGKGKTDRR 671

>NOG1_TRYBB (Q9U6A9) Nucleolar GTP-binding protein 1|
          Length = 655

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
 Frame = -3

Query: 608 KRERSLSRADGDNAMDVDGQHXXXXXXXXXXXXXXXRPIE-EVVPGDGIRDVAQKKKAIK 432
           KR RSLS A      D    H               R     V  G+G RDV +K +A+K
Sbjct: 552 KRGRSLSAAQEAVMRDRSSSHMSTKTTRGISSHSATRDRSLSVNRGEGYRDVNEKLRAVK 611

Query: 431 KSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGK-RGIGKTSRR 303
            S+   + RN +A++GE DR IP L+PKHLF+GK +  G+  RR
Sbjct: 612 LSKVVARPRNLQAKKGEGDRAIPNLRPKHLFTGKVKSNGRRDRR 655

>NOG1_ASHGO (Q74ZK6) Nucleolar GTP-binding protein 1|
          Length = 642

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           DG+ D + + KA + ++   + RN++AR+GEADR      PKHLFSGKRGIG   RR
Sbjct: 586 DGVADASMRSKADRMAKLHRRERNRQARQGEADRHATASLPKHLFSGKRGIGSNDRR 642

>NOG1_CANGA (Q6FRV0) Nucleolar GTP-binding protein 1|
          Length = 645

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           DG+ D + + KA + ++   + RN++AR+GEADR      PKHLFSGKRGIGK+  R
Sbjct: 589 DGVADGSMRSKADRMAKLQRRQRNRDARQGEADRHATASLPKHLFSGKRGIGKSDFR 645

>NOG1_DROME (Q9V411) Probable nucleolar GTP-binding protein 1|
          Length = 652

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 470 GIRDVAQKKKA-IKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           GI+++A +KKA I   RD  K       +GEADR I T  PKHLFSGKRG GKT RR
Sbjct: 596 GIKNLAIRKKAQIMAKRDIAKKVTSRGLKGEADRFIGTKMPKHLFSGKRGNGKTDRR 652

>NOG1_KLULA (Q6CM00) Nucleolar GTP-binding protein 1|
          Length = 643

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           DG+ D + + KA + ++   + RN+ AR GE+DR      PKHLFSGKRG+GKT  R
Sbjct: 587 DGVADGSMRSKAERMAKLERRERNRMARAGESDRHATASLPKHLFSGKRGVGKTDFR 643

>NOG1_HUMAN (Q9BZE4) Nucleolar GTP-binding protein 1 (Chronic renal failure|
           gene protein) (GTP-binding protein NGB)
          Length = 633

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = -3

Query: 470 GIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           G+RDV   KKA    +++ K  N+  ++GEADR +  +KPKHL SGKR  GK  RR
Sbjct: 578 GLRDVKMVKKAKTMMKNAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 633

>NOG1_MOUSE (Q99ME9) Nucleolar GTP-binding protein 1 (Chronic renal failure|
           gene protein) (GTP-binding protein NGB)
          Length = 633

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -3

Query: 470 GIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           G+RDV   KKA    + + K  N+  ++GEADR +  +KPKHL SGKR  GK  RR
Sbjct: 578 GLRDVKMVKKAKTMMKKAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKDRR 633

>NOG1_RAT (Q99P77) Nucleolar GTP-binding protein 1 (Chronic renal failure|
           gene protein)
          Length = 636

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 27/56 (48%), Positives = 35/56 (62%)
 Frame = -3

Query: 470 GIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           G+RDV   KKA    + + K  N+  ++GEADR +  +KPKHL SGKR  GK  RR
Sbjct: 581 GLRDVKMVKKAKTMMKKAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGKKERR 636

>NOG1_YEAST (Q02892) Nucleolar GTP-binding protein 1|
          Length = 647

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 25/57 (43%), Positives = 37/57 (64%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR 303
           DG+ D + + KA + ++   + RN+ A++GE+DR       KHLFSGKRG+GKT  R
Sbjct: 591 DGVADGSMRSKADRMAKMERRERNRHAKQGESDRHNAVSLSKHLFSGKRGVGKTDFR 647

>NOG1_CAEEL (O44411) Probable nucleolar GTP-binding protein 1|
          Length = 681

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
 Frame = -3

Query: 635 RLRSQSRG-RKRERSLSRAD---GDNAMDVDGQHXXXXXXXXXX---------XXXXXRP 495
           R+ S+  G RKR+RS+SR +   G+  +DVD +                           
Sbjct: 556 RIGSRIHGSRKRDRSMSRLENELGELGVDVDTKKMKNLQGQCAKPQLGKKMKVGRSRSLS 615

Query: 494 IEEVVPGDGIRDVAQKKKA-IKKSRD-SVKNRNKEARRGEADRVIPTLKPKHLFSGKRGI 321
                P D +    ++K+A + K R  +++   +EA++GEADR +  LKPKHLF GKRG 
Sbjct: 616 AVRPAPRDELAFPDEEKRAHVDKLRTKAMRGLRREAKKGEADRHVYDLKPKHLFCGKRGN 675

Query: 320 GKTSRR 303
           GKT  R
Sbjct: 676 GKTDWR 681

>NOG1_SCHPO (O94659) Probable nucleolar GTP-binding protein 1|
          Length = 642

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 28/63 (44%), Positives = 36/63 (57%)
 Frame = -3

Query: 491 EEVVPGDGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKT 312
           E  V  +G R  A +   +K+      +RN+ AR  E+DR +   KPKHL SGKRG GKT
Sbjct: 585 ESGVHAEGARSYADRLARVKQI-----HRNRMARASESDRHVIAAKPKHLLSGKRGNGKT 639

Query: 311 SRR 303
            RR
Sbjct: 640 QRR 642

>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -3

Query: 629 RSQSRGRKRERSLSRADGDNAMDVDGQHXXXXXXXXXXXXXXXRPIEEVVPGD-GIRDVA 453
           RS+SR RKRER   R   +  ++ +                   P ++   GD GI  + 
Sbjct: 293 RSRSRERKRERDRDREKKEERVEAEVPEADDA------------PQDDAQIGDLGIDGIE 340

Query: 452 QKKKAIKKSRDSVKNRNKEARRGEADR 372
            K++  +KSR+  + R+++  +GE DR
Sbjct: 341 LKQEPEEKSRERDRERDRDREKGEKDR 367

>CAT2_NEUCR (Q8X182) Peroxidase/catalase 2 (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 753

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/87 (26%), Positives = 36/87 (41%)
 Frame = -2

Query: 411 EQEQGGSPWRGGSRHPHVETEASLLWKTRNWEDQQAVNKSMWTLLLAITRSGTAESLPFF 232
           E +Q  +P      +  ++    LLW  +    Q+  NK  W+ LL +T +   ES+ F 
Sbjct: 107 EGQQRFAPLNSWPDNVSLDKARRLLWPIK----QKYGNKISWSDLLLLTGNVALESMGFK 162

Query: 231 VLGIGGGLSANLAGDTTIYCIFIFVWL 151
             G  GG       D ++Y      WL
Sbjct: 163 TFGFAGGRPDTWEADESVYWGAETTWL 189

>PSF1_MOUSE (Q9CZ15) DNA replication complex GINS protein PSF1|
          Length = 196

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKH 345
           DG+R V ++ KA+ +   S  N  K A RG+   +IPT+K +H
Sbjct: 27  DGLRQVLEEMKALYEQNQSDVNEAKSAGRGD---LIPTVKFRH 66

>EDNRB_MOUSE (P48302) Endothelin B receptor precursor (ET-B) (Endothelin|
           receptor Non-selective type)
          Length = 442

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 169 FYLCLAFALCYSFVRLHRCRTICLYHRSTPH*C 71
           F L L FALC+  + L R   + LY +S PH C
Sbjct: 326 FCLVLVFALCWLPLHLSRILKLTLYDQSNPHRC 358

>OSBL5_MOUSE (Q9ER64) Oxysterol-binding protein-related protein 5 (OSBP-related|
           protein 5) (ORP-5) (Oxysterol-binding protein homolog 1)
          Length = 874

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -2

Query: 396 GSPWRGGSRHPHVETEASLLWKTRNWEDQQAVNKSMWTLLLAITRSGTAES---LPFFVL 226
           G PWRG +    V+ E   L +T   E     NKS+  +LL   R G   S   LP FVL
Sbjct: 334 GGPWRGTTYVEQVQEELGELDETSQVETVSEENKSLMWVLLRQLRPGMDLSRVVLPTFVL 393

>Y1533_MYCBO (P63578) Hypothetical protein Mb1533|
          Length = 334

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 541 TRSCVQGRGLGPNHDQLKRSYQV-TGSGMLLKRRRPSRNQGTLSRTGTRRLAVERRIASS 365
           T S V+GRGL    D ++R  QV TG+G    RRR  +   T       R AV  R+ S+
Sbjct: 241 TMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLV---RDAVLDRVWSN 297

Query: 364 PR*NRSISSLE 332
           P   +  S LE
Sbjct: 298 PTVRKVRSELE 308

>Y1496_MYCTU (P63577) Hypothetical protein Rv1496/MT1543|
          Length = 334

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 541 TRSCVQGRGLGPNHDQLKRSYQV-TGSGMLLKRRRPSRNQGTLSRTGTRRLAVERRIASS 365
           T S V+GRGL    D ++R  QV TG+G    RRR  +   T       R AV  R+ S+
Sbjct: 241 TMSAVEGRGLAELWDTVERHRQVLTGAGEFDARRRDQQVDWTWQLV---RDAVLDRVWSN 297

Query: 364 PR*NRSISSLE 332
           P   +  S LE
Sbjct: 298 PTVRKVRSELE 308

>FIS2_ARATH (Q9ZNT9) Polycomb group protein FERTILIZATION-INDEPENDENT SEED 2|
          Length = 632

 Score = 25.8 bits (55), Expect(2) = 6.7
 Identities = 13/66 (19%), Positives = 31/66 (46%)
 Frame = -3

Query: 455 AQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKHLFSGKRGIGKTSRR*TSQCGRCC 276
           ++K K+ +K+ D++ +  K     +   ++ T +P      +  + + SRR      RC 
Sbjct: 414 SKKNKSTRKNDDNIPSPPKTRSSKKTSNILATTQPAKAEPSEPKVTRVSRRKELHAERCE 473

Query: 275 LRSLDQ 258
            + L++
Sbjct: 474 AKRLER 479



 Score = 22.7 bits (47), Expect(2) = 6.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 214 RLERQSGRRYYH 179
           RLER  GR++YH
Sbjct: 476 RLERLKGRQFYH 487

>PSF1_HUMAN (Q14691) DNA replication complex GINS protein PSF1|
          Length = 196

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = -3

Query: 473 DGIRDVAQKKKAIKKSRDSVKNRNKEARRGEADRVIPTLKPKH 345
           DG+R V ++ KA+ +   S  N   EA+ G    +IPT+K +H
Sbjct: 27  DGLRQVLEEMKALYEQNQSDVN---EAKSGGRSDLIPTIKFRH 66

>Y103_ENCCU (Q8STG1) Hypothetical protein|
           ECU01_0030/ECU01_1580/ECU04_0040/ECU05_0010/
           ECU08_2140/ECU10_1890
          Length = 123

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 462 GCCSKEEGHQEIKGLCQEQEQGGSPWRGGSRHPHVETEAS--LLWKT 328
           GC  +E     + GL +E E GG+  + G R   V  E    LLW+T
Sbjct: 38  GCIQREMCEGAVSGLWEEGEDGGTRTQMGKRAREVGLEEGVLLLWRT 84

>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = +2

Query: 62  LRSALVRSRPMVQAYSSTTM*SNKRVTESKSQTKIKMQ*MVVSPARL-ALKPPPMPSTKN 238
           L S L  S P   + SS++   +  VT S S +  +      +PA   A  P P PS+ N
Sbjct: 191 LASLLGSSGPPASSSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPAPSSGN 250

Query: 239 G-SDSAVPDRVIASSNVHIDLFT 304
           G S +A P + I  S++   L T
Sbjct: 251 GTSTAASPTQPIQLSDLQSILAT 273


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,847,248
Number of Sequences: 219361
Number of extensions: 2071575
Number of successful extensions: 6192
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6188
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)