>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 662

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG  A +  +Y+I+Y  F    ++G  S  LY GY++IM     L TG IGF   F+FV 
Sbjct: 595 SGFTAVYFLIYAIHYF-FSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVT 653

Query: 229 YLFSSVKID 203
            ++S VK+D
Sbjct: 654 KIYSVVKVD 662

>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG  A +  +Y+I+Y  F    ++G  S  LY GY++IM     L TG IGF   F+FV 
Sbjct: 596 SGFTAVYFLVYAIHYF-FSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVT 654

Query: 229 YLFSSVKID 203
            ++S VK+D
Sbjct: 655 KIYSVVKVD 663

>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor|
          Length = 663

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG  A +  +Y+++Y  F    ++G  S  LY GY++IM     L TG IGF   F+FV 
Sbjct: 596 SGFTAVYFLIYAVHYF-FSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVT 654

Query: 229 YLFSSVKID 203
            ++S VK+D
Sbjct: 655 KIYSVVKVD 663

>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor|
           (p76)
          Length = 663

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 40/69 (57%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG  A +  +Y+++Y  F    ++G  S  LY GY++IM     L TG IGF   F+FV 
Sbjct: 596 SGFTAVYFLIYAVHYF-FSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVT 654

Query: 229 YLFSSVKID 203
            ++S VK+D
Sbjct: 655 KIYSVVKVD 663

>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG  AF+V +Y+I Y V  L  +   + + LY GY+ +M  +  L TG IGF  ++ FV 
Sbjct: 558 SGGSAFYVLVYAIFYFVNKLDIVEF-IPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVR 616

Query: 229 YLFSSVKID 203
            ++++VKID
Sbjct: 617 KIYAAVKID 625

>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane|
           protein) (Pheromone alpha-factor transporter) (Acidic 24
           kDa late endocytic intermediate component)
          Length = 667

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 26/65 (40%), Positives = 41/65 (63%)
 Frame = -3

Query: 397 AFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVHYLFS 218
           A +VF++SI +  F    L G  +  LY+GYS +++    L TG+IGF+ S  FV  ++S
Sbjct: 606 ALYVFIHSILFTKF---KLGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYS 662

Query: 217 SVKID 203
           S+K+D
Sbjct: 663 SIKVD 667

>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 406 GSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVHY 227
           GS   F+FLYS+ Y      ++SG V    + GYSL+  +   L  G I F  S  F+ Y
Sbjct: 540 GSTGLFIFLYSVFYYA-RRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRY 598

Query: 226 LFSSVKID 203
           ++ ++K+D
Sbjct: 599 IYVNLKMD 606

>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 406 GSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVHY 227
           GS   F+FLYS+ Y      ++SG V    + GYSL+  +   L  G I F  S  F+ Y
Sbjct: 540 GSTGLFIFLYSVFYYA-RRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRY 598

Query: 226 LFSSVKID 203
           ++ ++K+D
Sbjct: 599 IYVNLKMD 606

>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor|
           (hMP70)
          Length = 606

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 406 GSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVHY 227
           GS   F+FLYS+ Y      ++SG V    + GYSL+  +   L  G I F  S  F+ Y
Sbjct: 540 GSTGLFIFLYSVFYYA-RRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRY 598

Query: 226 LFSSVKID 203
           ++ ++K+D
Sbjct: 599 IYVNLKMD 606

>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 589

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 406 GSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVHY 227
           GS   F+FLYS+ Y      ++SG V    + GYSL+  +   L  G I F  S  F+ Y
Sbjct: 523 GSTGLFIFLYSVFYYA-RRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRY 581

Query: 226 LFSSVKID 203
           ++ ++K+D
Sbjct: 582 IYVNLKMD 589

>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = -3

Query: 412 ASGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFV 233
           ++ S A +V++YS  Y  F  + + G    + Y GY  + + A+ +  GAIG++ +  FV
Sbjct: 521 SAASTAIYVYMYSFYYYFFKTK-MYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFV 579

Query: 232 HYLFSSVKID 203
             ++++VKID
Sbjct: 580 RKIYTNVKID 589

>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = -3

Query: 412 ASGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFV 233
           ++ S A +V++YS  Y  F  + + G    + Y GY  + + A+ +  GAIG++ +  FV
Sbjct: 519 SAASTAIYVYMYSFYYYFFKTK-MYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFV 577

Query: 232 HYLFSSVKID 203
             ++++VKID
Sbjct: 578 RKIYTNVKID 587

>YEU3_YEAST (P40071) Hypothetical protein YER113C precursor|
          Length = 706

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 19/63 (30%), Positives = 36/63 (57%)
 Frame = -3

Query: 409 SGSVAFFVFLYSINYLVFDLRSLSGPVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYFVH 230
           SG V  ++ LYS+ Y +F + ++ G  S  + + YSLI      L  GA+ +L + +F++
Sbjct: 641 SGGV--YMELYSL-YYIFAVLNIHGFSSILISICYSLIFNVMCSLGLGALSYLTASWFIN 697

Query: 229 YLF 221
            ++
Sbjct: 698 KIY 700

>CBIW_BACME (O87688) Putative 2Fe-2S ferredoxin|
          Length = 127

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 266 TSRQHDGKCHDQGVAKVERRGDWPAQAPE-VEHQVVD 373
           T+R  +G+C D  VA V   GDW  Q  E V H++V+
Sbjct: 50  TTRTCNGRCKDAPVAIVYPSGDWYKQVTEKVAHRIVE 86

>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +2

Query: 257 ADGTSRQHDGKCHDQGVAKVERRGDWPAQAPEVEHQV 367
           A+GT  + +G+   +G  +VE+ G+  A+  EVEH+V
Sbjct: 808 AEGTEDEQEGETEAEG-KEVEQEGETEAEGKEVEHEV 843

>ATS18_HUMAN (Q8TE60) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 18) (ADAM-TS
            18) (ADAM-TS18)
          Length = 1221

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 12/49 (24%)
 Frame = -2

Query: 380  ILHQLPGV----------RPQEPERASLRDALPW--LLPDHGICHHAVY 270
            +LHQ P V           P++ E  S  D   W  L+P HG+C+H  Y
Sbjct: 1161 LLHQKPPVLRACNTNFCPAPEKREDPSCVDFFNWCHLVPQHGVCNHKFY 1209

>ATS18_MOUSE (Q4VC17) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 18) (ADAM-TS
            18) (ADAM-TS18)
          Length = 1219

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 12/49 (24%)
 Frame = -2

Query: 380  ILHQLPGV----------RPQEPERASLRDALPW--LLPDHGICHHAVY 270
            +LHQ P V           P++ +  S  D   W  L+P HG+C+H  Y
Sbjct: 1159 LLHQKPPVLRACNTNFCPAPEKKDDPSCVDFFSWCHLVPQHGVCNHKFY 1207

>LBR_CHICK (P23913) Lamin-B receptor|
          Length = 637

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -3

Query: 406 GSVAFFVFLYSINYLVFDLRSLSG-PVSATLYLGYSLIMAFAIMLSTGAIGFLLSFYF-V 233
           G    + F  ++ YL+   + + G P+S    L Y +   +A +L+  AIG LL F F +
Sbjct: 252 GVFLLWFFFQALFYLLPIGKVVEGLPLSNPRKLQYRINGFYAFLLTAAAIGTLLYFQFEL 311

Query: 232 HYLF 221
           HYL+
Sbjct: 312 HYLY 315

>MNTB_SYNY3 (Q55282) Manganese transport system membrane protein mntB|
          Length = 306

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = -3

Query: 301 LIMAFAIMLSTGAIGFLLSFYFVHYLFSSV 212
           +I+  +++++ G+IG+LLS  F H L+ SV
Sbjct: 206 IILVISMLVTPGSIGYLLSDRFDHMLWYSV 235

>ERG7_SCHPO (Q10231) Lanosterol synthase (EC 5.4.99.7)|
           (Oxidosqualene--lanosterol cyclase)
           (2,3-epoxysqualene--lanosterol cyclase) (OSC)
          Length = 721

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = -2

Query: 407 WLRCFLRLPILHQLPGVRPQEPERASLRDALPWLLPDHGICHHAVYWCH 261
           W + +L     +   GV P  PE         WLLPD    H   +WCH
Sbjct: 189 WGKFWLATLNCYDWDGVNPIPPEL--------WLLPDWIPFHPGKWWCH 229


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,617,289
Number of Sequences: 219361
Number of extensions: 741963
Number of successful extensions: 1938
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)