| Clone Name | rbasd23d17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence Length = 1556 Score = 1110 bits (560), Expect = 0.0 Identities = 667/699 (95%), Gaps = 7/699 (1%) Strand = Plus / Minus Query: 41 tttttacaaggnaactatacaaacatgtttgcaaaaacaacattttt-actagatcaatg 99 ||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 1488 tttttacaagg-aactatacaaacatgtttgcgaaaagaacattttttactagatcaatg 1430 Query: 100 tggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatg----acg 154 ||||||||||||| ||||||||||||||| | || |||| ||||||||||| | || Sbjct: 1429 tggttcctacaagttggaccctcgtataatcaccaaaaaacatacagggcacgcacgaca 1370 Query: 155 gggcgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcct 214 | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1369 agtcgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcct 1310 Query: 215 ccccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgt 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 ccccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgt 1250 Query: 275 gggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcgg 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 gggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcgg 1190 Query: 335 catctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggccca 394 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1189 cgtctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggccca 1130 Query: 395 agaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaa 454 |||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||| Sbjct: 1129 agaaagggtttccaccagatgatccgatcgcgacttgcccaatcttcttactgaacccaa 1070 Query: 455 atctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccag 514 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1069 atctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcactggatgccccag 1010 Query: 515 ttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacag 574 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 ttgtcacattgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacag 950 Query: 575 ccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttg 634 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 949 ccatttggttctctaggtagctcctgctgtacagtccagactcaagcctctcttcgcttg 890 Query: 635 gagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacag 694 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 889 gagcaaagaacgtgagcccaccagcttgacctcgaggaatgatggaaatcttggcaacag 830 Query: 695 ggtcatattcaggcatcanggcaccgacnagggcatgtc 733 |||||||||||||||||| ||||||||| |||||||||| Sbjct: 829 ggtcatattcaggcatcagggcaccgacgagggcatgtc 791
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 1090 bits (550), Expect = 0.0 Identities = 658/694 (94%), Gaps = 7/694 (1%) Strand = Plus / Minus Query: 41 tttttacaaggnaactatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 100 ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755 Query: 101 ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 159 |||||||||||| ||||||||||| ||| | ||||||| |||||||| || | | Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701 Query: 160 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 219 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641 Query: 220 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 279 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581 Query: 280 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 339 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521 Query: 340 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461 Query: 400 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 459 |||||||||||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401 Query: 460 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 519 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341 Query: 520 acgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 579 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 acattgtcttgcccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 281 Query: 580 tggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagca 639 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 280 tggttctctaggtagctcctgctgtacagcccagactcgagcctctcttcgcttggagca 221 Query: 640 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtca 699 ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 220 aagaacgtgagcccaccagcttgaccacgaggaatgatggaaatcttggcaacagggtca 161 Query: 700 tattcaggcatcanggcaccgacnagggcatgtc 733 ||||||||||||| ||||||||| |||||||||| Sbjct: 160 tattcaggcatcagggcaccgacgagggcatgtc 127
>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA sequence Length = 654 Score = 930 bits (469), Expect = 0.0 Identities = 556/583 (95%), Gaps = 4/583 (0%) Strand = Plus / Minus Query: 39 catttttacaaggnaactatacaaacatgtttgcaaaaacaacatttttactagatcaat 98 ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 582 catttttacaagg-aactatacaaacatgtttgcggaaagaacatttttactagatcaat 524 Query: 99 gtggttcctacaagctggaccctcgtataaccgccgaaaacatacagggcatgacggggc 158 ||||||||||||| ||||||||||||||| | | ||||||||||| |||| ||| | | Sbjct: 523 gtggttcctacaacttggaccctcgtataatcacggaaaacatacaaggcacgacaagtc 464 Query: 159 gacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctcccc 218 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 463 gacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctcccc 404 Query: 219 gtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggt 278 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 403 gtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatatcgatgtgggt 344 Query: 279 gttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatc 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 gttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatc 284 Query: 339 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 224 Query: 399 agggttt---ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaa 455 ||||||| |||||||||||||| || || |||||||| |||||||||||||||||||| Sbjct: 223 agggtttccaccaccagatgacccgattgcgacttgcccaatcttcttgctgaacccaaa 164 Query: 456 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 104 Query: 516 tgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 575 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103 tgtcacattgtcttggccaaagataacctcctcggcaaccctgccaccaagtgccacagc 44 Query: 576 catttggttctctaggtagctcctgctgtacagtccagactcg 618 |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 43 catttggttctctaggtagctcctgctgtatagtccagactcg 1
>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full insert sequence Length = 2378 Score = 642 bits (324), Expect = 0.0 Identities = 505/566 (89%) Strand = Plus / Minus Query: 166 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034 Query: 226 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974 Query: 286 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914 Query: 346 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854 Query: 406 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794 Query: 466 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734 Query: 526 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585 |||||||||||||||||||| ||||||||||| |||||||| || || |||||||||||| Sbjct: 1733 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 1674 Query: 586 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645 |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 1673 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaagaat 1614 Query: 646 gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 1613 gtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattca 1554 Query: 706 ggcatcanggcaccgacnagggcatg 731 ||||| | |||||| || |||||||| Sbjct: 1553 ggcatgagggcaccaacaagggcatg 1528
>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full insert sequence Length = 1325 Score = 642 bits (324), Expect = 0.0 Identities = 505/566 (89%) Strand = Plus / Minus Query: 166 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090 Query: 226 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030 Query: 286 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970 Query: 346 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 969 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910 Query: 406 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465 ||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 909 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850 Query: 466 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525 |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || Sbjct: 849 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790 Query: 526 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585 |||||||||||||||||||| ||||||||||| |||||||| || || |||||||||||| Sbjct: 789 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 730 Query: 586 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645 |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 729 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaagaat 670 Query: 646 gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705 ||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 669 gtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattca 610 Query: 706 ggcatcanggcaccgacnagggcatg 731 ||||| | |||||| || |||||||| Sbjct: 609 ggcatgagggcaccaacaagggcatg 584
>gb|AY103957.1| Zea mays PCO116832 mRNA sequence Length = 1820 Score = 571 bits (288), Expect = e-159 Identities = 496/566 (87%) Strand = Plus / Minus Query: 166 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225 |||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||||||| Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386 Query: 226 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285 |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326 Query: 286 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345 |||||| | || | ||||||||| |||||||||||||||| |||||||| || || | Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266 Query: 346 tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405 ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206 Query: 406 ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465 ||||| | | ||| ||||||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146 Query: 466 atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525 || || || ||||||||||| || |||||||||||| |||| || || |||||||||||| Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086 Query: 526 tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct: 1085 tcttggccaaagatcacctcctcagcaaccctgccaccaagggctacagccatttggttc 1026 Query: 586 tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645 || || |||||||||||||||| |||||| || ||||| |||||||||||||||||||| Sbjct: 1025 tcaagatagctcctgctgtacaatccagattctagcctttcttcgcttggagcaaagaat 966 Query: 646 gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705 ||||| ||||||||||| || ||||| ||||||||||||||||| || || ||||| || Sbjct: 965 gtgagtccaccagcctggccacgagggatgatggaaatcttggctactggatcatactct 906 Query: 706 ggcatcanggcaccgacnagggcatg 731 ||||| | ||| ||||| |||||||| Sbjct: 905 ggcatgagggcgccgacaagggcatg 880
>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds Length = 2447 Score = 230 bits (116), Expect = 5e-57 Identities = 296/356 (83%) Strand = Plus / Minus Query: 355 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 414 ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| ||| | Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893 Query: 415 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 474 ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833 Query: 475 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 534 || || ||||| || |||||||| ||| | |||||||||||||| ||||| ||||| ||| Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttgtcca 1773 Query: 535 aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 594 || || |||||||| |||||||| |||||||||| || |||||||| |||||||||||| Sbjct: 1772 aaaataacctcctcagcaaccctttcaccaagtgcaactgccatttgattctctaggtag 1713 Query: 595 ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagacca 654 ||||||||||||| || ||||| || || |||||||| || |||||||| || |||||| Sbjct: 1712 ctcctgctgtacaagcccgactcaagtctttcttcgctgggggcaaagaaggtaagacca 1653 Query: 655 ccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 ||||| || ||||||||||| || || |||||||||||||| ||||| || ||||| Sbjct: 1652 ccagcttggcctcgaggaattatagatatcttggcaacaggatcatactcgggcat 1597
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 228 bits (115), Expect = 2e-56 Identities = 158/173 (91%) Strand = Plus / Plus Query: 559 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618 |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 30359590 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 30359649 Query: 619 agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678 |||||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 30359650 agcctctcctcgcttggagcaaagaatgtgagtccaccagcttgaccacgaggaatgatg 30359709 Query: 679 gaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggcatg 731 |||||||| ||||||||||||||||||||||| | |||||| || |||||||| Sbjct: 30359710 gaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 30359762 Score = 222 bits (112), Expect = 1e-54 Identities = 160/176 (90%) Strand = Plus / Plus Query: 384 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 443 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385 Query: 444 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 503 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445 Query: 504 ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 559 ||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| Sbjct: 30359446 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 30359501 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 166 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787 Query: 226 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847 Query: 286 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907 Query: 346 tccgccgtggccatcgagtagtccttctggctcgacatctgc 387 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 228 bits (115), Expect = 2e-56 Identities = 158/173 (91%) Strand = Plus / Plus Query: 559 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618 |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106185 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 106244 Query: 619 agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678 |||||||| ||||||||||||||||| ||||| |||||||| ||||| |||||||||||| Sbjct: 106245 agcctctcctcgcttggagcaaagaatgtgagtccaccagcttgaccacgaggaatgatg 106304 Query: 679 gaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggcatg 731 |||||||| ||||||||||||||||||||||| | |||||| || |||||||| Sbjct: 106305 gaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 106357 Score = 222 bits (112), Expect = 1e-54 Identities = 160/176 (90%) Strand = Plus / Plus Query: 384 ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 443 |||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980 Query: 444 gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 503 |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| | Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040 Query: 504 ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 559 ||| |||||||||||||| || |||||||||||||||||||| ||||||||||||| Sbjct: 106041 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 106096 Score = 210 bits (106), Expect = 5e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 166 gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225 |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382 Query: 226 gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285 ||||||||||| ||||| || | || ||| ||||||||||||||||||| || ||||| Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442 Query: 286 atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345 |||||||| || | ||||||||| |||||||||| ||||| ||||| ||||| || | Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502 Query: 346 tccgccgtggccatcgagtagtccttctggctcgacatctgc 387 ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544
>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein Length = 1989 Score = 222 bits (112), Expect = 1e-54 Identities = 295/356 (82%) Strand = Plus / Minus Query: 355 gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 414 ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| ||| | Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805 Query: 415 gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 474 || || |||||||| || ||||| |||||||| || ||||| |||||||| || || Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745 Query: 475 gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 534 || || ||||| || |||||||| || | ||||| ||||| || |||||||||| ||| Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtcttctcca 1685 Query: 535 aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 594 || || |||||||| |||||||| ||||||||||| || |||||||| |||||||||||| Sbjct: 1684 aaaataacctcctcagcaacccttccaccaagtgcaactgccatttgattctctaggtag 1625 Query: 595 ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagacca 654 |||||||||||||| || ||||| || || |||||||| || |||||||| ||||||||| Sbjct: 1624 ctcctgctgtacaggcctgactcaagtctttcttcgctgggggcaaagaaggtgagacca 1565 Query: 655 ccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || || || || |||||||| || || |||||||||||||| ||||| || ||||| Sbjct: 1564 ccggcttggccacgaggaattatagatatcttggcaacaggatcatactcgggcat 1509
>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/ metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds Length = 2473 Score = 220 bits (111), Expect = 5e-54 Identities = 243/287 (84%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1962 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1903 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1902 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1843 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1842 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1783 Query: 664 cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1782 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1736 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201
>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease Length = 2447 Score = 220 bits (111), Expect = 5e-54 Identities = 243/287 (84%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1960 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1901 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1900 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1841 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1840 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1781 Query: 664 cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1780 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1734 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199
>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2182 Score = 220 bits (111), Expect = 5e-54 Identities = 243/287 (84%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1829 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1770 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1769 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1710 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1709 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1650 Query: 664 cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1649 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1603 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068
>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250) mRNA, complete cds Length = 2452 Score = 220 bits (111), Expect = 5e-54 Identities = 243/287 (84%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1925 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1866 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1865 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1806 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1805 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1746 Query: 664 cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1745 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1699 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164
>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast gene for chloroplast product Length = 2352 Score = 184 bits (93), Expect = 3e-43 Identities = 227/271 (83%), Gaps = 3/271 (1%) Strand = Plus / Minus Query: 442 ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcg 501 ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtca 1834 Query: 502 ctggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgcca 561 | || |||||||| || || || || |||||||| | |||| ||||||||||| || Sbjct: 1833 tttgacgccccagtggtgacattatcctggccaaaaa---cctcttcggcaacccttcct 1777 Query: 562 ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 621 |||||||| || ||||| || ||||| | |||||| || ||||||| ||||||||| ||| Sbjct: 1776 ccaagtgcaaccgccatctgattctccaagtagcttctactgtacaatccagactcaagc 1717 Query: 622 ctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaa 681 ||||||||||| |||||||| || |||||||||||||| || || ||||| || || || Sbjct: 1716 ctctcttcgctaggagcaaaaaaggtgagaccaccagcttggccacgaggtataatagat 1657 Query: 682 atcttggcaacagggtcatattcaggcatca 712 |||||||| |||||||||||||||||||||| Sbjct: 1656 atcttggctacagggtcatattcaggcatca 1626
>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial Length = 2190 Score = 184 bits (93), Expect = 3e-43 Identities = 225/269 (83%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 1625 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1566 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| |||||||| || ||||||| ||||||||| ||||| ||||||||||| ||| Sbjct: 1565 tcctctgcaacccttccgccaagtgaacaagccatttgattctcaaggtagctcctactg 1506 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1505 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1446 Query: 664 cctcgaggaatgatggaaatcttggcaac 692 || ||||||||||| |||||||| ||||| Sbjct: 1445 ccacgaggaatgatagaaatctttgcaac 1417
>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS28ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2428 Score = 180 bits (91), Expect = 4e-42 Identities = 238/287 (82%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || | ||| Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccaaacga 1962 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| |||| || || | |||||||||||| Sbjct: 1961 gacacctgcatgaaatcatttgatgctccagtcgtcaaattctcatccccaaagatcacc 1902 Query: 544 tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603 ||||| | || || || |||||||| ||||||||||| ||||| ||||||||||| ||| Sbjct: 1901 tcctctgaaaaacttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1842 Query: 604 tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663 |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || Sbjct: 1841 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1782 Query: 664 cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710 || ||||||||||| |||||||| ||||| || |||||||| ||||| Sbjct: 1781 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1735 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200
>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete cds Length = 3058 Score = 167 bits (84), Expect = 6e-38 Identities = 261/320 (81%) Strand = Plus / Minus Query: 391 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000 Query: 451 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 1999 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1940 Query: 511 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 570 || |||||||| || || | |||||||||||||| || |||||||| ||||||||||| Sbjct: 1939 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1880 Query: 571 acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 630 ||||||||||||||||| |||||||| ||||| |||| ||| ||||| |||||||||||| Sbjct: 1879 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1820 Query: 631 cttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggca 690 || ||||| || || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 1819 ctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatcgatatcttggcc 1760 Query: 691 acagggtcatattcaggcat 710 || || ||||| || ||||| Sbjct: 1759 actggatcatactccggcat 1740
>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds Length = 2311 Score = 167 bits (84), Expect = 6e-38 Identities = 261/320 (81%) Strand = Plus / Minus Query: 391 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926 Query: 451 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 1925 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1866 Query: 511 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 570 || |||||||| || || | |||||||||||||| || |||||||| ||||||||||| Sbjct: 1865 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1806 Query: 571 acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 630 ||||||||||||||||| |||||||| ||||| |||| ||| ||||| |||||||||||| Sbjct: 1805 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1746 Query: 631 cttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggca 690 || ||||| || || ||||| |||||||| || || || ||||| || || |||||||| Sbjct: 1745 ctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatcgatatcttggcc 1686 Query: 691 acagggtcatattcaggcat 710 || || ||||| || ||||| Sbjct: 1685 actggatcatactccggcat 1666
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Minus Query: 562 ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 621 |||||||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||| || Sbjct: 61858 ccaagtgcaacagccatttgattctcaaggtagctcctactgtacaatccagactcaagt 61799 Query: 622 ctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaa 681 || ||||||||||||||||| || ||||| |||||||| || || ||||||||||| ||| Sbjct: 61798 ctttcttcgcttggagcaaaaaaagtgagcccaccagcttggccacgaggaatgatagaa 61739 Query: 682 atcttggcaacagggtcatattcaggcat 710 ||||| ||||| || |||||||| ||||| Sbjct: 61738 atctttgcaaccggatcatattctggcat 61710 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 424 gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483 |||||||| || ||||| ||||||||||||||||| |||| |||||| | || ||||| Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048 Query: 484 gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543 || ||||||||||| || | ||||| ||||| ||||| || || | |||||||||||| Sbjct: 62047 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 61988 Query: 544 tcctcggcaaccctg 558 ||||| ||||||||| Sbjct: 61987 tcctctgcaaccctg 61973 Score = 46.1 bits (23), Expect = 0.16 Identities = 50/59 (84%) Strand = Plus / Minus Query: 187 ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245 ||||| || ||||| ||||||||||| || ||||| || || || |||||||||||||| Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374
>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds Length = 600 Score = 145 bits (73), Expect = 2e-31 Identities = 141/164 (85%) Strand = Plus / Minus Query: 559 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618 ||||| ||||| |||||||| || ||||| ||||| || || |||||||||||||||||| Sbjct: 581 ccacccagtgcaacagccatctgattctccaggtaacttctactgtacagtccagactcg 522 Query: 619 agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678 || |||||||| ||||||||||| || || |||||||| || || || || ||||||||| Sbjct: 521 agtctctcttcacttggagcaaaaaaggtaagaccacctgcttggccacggggaatgatg 462 Query: 679 gaaatcttggcaacagggtcatattcaggcatcanggcaccgac 722 || |||||||| |||||||||||||||||||| | |||||||| Sbjct: 461 gatatcttggccacagggtcatattcaggcataagtgcaccgac 418
>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14 Length = 59762 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 559 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618 ||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||| ||||| Sbjct: 43080 ccaccaagtgcaacagccatttggttctcaaggtagcttctgctatacaatccggactct 43021 Query: 619 agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678 |||||||||||||| ||||| || || ||||| |||||||| || || || ||||| || Sbjct: 43020 agcctctcttcgctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatc 42961 Query: 679 gaaatcttggcaacagggtcatattcaggcat 710 || |||||||| || || ||||| || ||||| Sbjct: 42960 gatatcttggccactggatcatactccggcat 42929 Score = 61.9 bits (31), Expect = 3e-06 Identities = 133/167 (79%) Strand = Plus / Minus Query: 391 cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450 ||||||||||||||||| || | | |||| |||||||| || ||||| ||||||||| Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278 Query: 451 ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510 || ||||| ||||||||||| | || || || || || |||||||| || | ||||| Sbjct: 43277 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 43218 Query: 511 ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccct 557 || |||||||| || || | |||||||||||||| || |||||||| Sbjct: 43217 ccggttgtcacattctcgtctccaaagatcacctcttctgcaaccct 43171
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 640 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatctt 686 ||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 154880 aagaatgtgagaccacccgcctgaccacgaggaatgatggaaatctt 154926
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 60.0 bits (30), Expect = 1e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 640 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtca 699 |||||||||||||| || || | || ||||||||||| |||||||| ||| ||||| Sbjct: 1951750 aagaacgtgagaccgccggcattgccgcgaggaatgatcgaaatcttttgaacggggtcg 1951809 Query: 700 tattcaggcatcanggcaccgacnagggcatg 731 || |||||||||| |||||||| |||||||| Sbjct: 1951810 taatcaggcatcagagcaccgacgagggcatg 1951841
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 24613541 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 24613597
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 39504 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 39560
>dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E14, full insert sequence Length = 1443 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 617 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 561
>dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A12, full insert sequence Length = 1284 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563 |||||||||||| || ||||||| ||||| || | |||||| |||||||||||||| Sbjct: 564 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 508
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 48.1 bits (24), Expect = 0.041 Identities = 52/62 (83%) Strand = Plus / Minus Query: 670 ggaatgatggaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggca 729 ||||||||||| ||||| ||| ||||| || |||||||||| |||||| || |||||| Sbjct: 305613 ggaatgatggagatcttctgaactgggtcgtagtcaggcatcagggcacccacaagggca 305554 Query: 730 tg 731 || Sbjct: 305553 tg 305552
>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three novel genes, complete sequence Length = 188728 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 tgtttgcaaaaacaacattttt 87 |||||||||||||||||||||| Sbjct: 113149 tgtttgcaaaaacaacattttt 113128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,047,059 Number of Sequences: 3902068 Number of extensions: 5047059 Number of successful extensions: 93649 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93489 Number of HSP's gapped (non-prelim): 151 length of query: 733 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 710 effective length of database: 17,143,297,704 effective search space: 12171741369840 effective search space used: 12171741369840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)