ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ... 1110 0.0
2gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ... 1090 0.0
3gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full i... 930 0.0
4dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0
5dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 0.0
6gb|AY103957.1| Zea mays PCO116832 mRNA sequence 571 e-159
7dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot... 230 5e-57
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
9dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
10emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein 222 1e-54
11ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti... 220 5e-54
12emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease 220 5e-54
13gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr... 220 5e-54
14gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr... 220 5e-54
15gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple... 184 3e-43
16emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial 184 3e-43
17emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co... 180 4e-42
18ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d... 167 6e-38
19gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp... 167 6e-38
20gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom... 145 2e-31
21gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds 145 2e-31
22dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 111 3e-21
23emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 70 1e-08
24gb|CP000097.1| Synechococcus sp. CC9902, complete genome 60 1e-05
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
26dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
27dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
28dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
29gb|CP000110.1| Synechococcus sp. CC9605, complete genome 48 0.041
30emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on ch... 44 0.64

>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score = 1110 bits (560), Expect = 0.0
 Identities = 667/699 (95%), Gaps = 7/699 (1%)
 Strand = Plus / Minus

                                                                        
Query: 41   tttttacaaggnaactatacaaacatgtttgcaaaaacaacattttt-actagatcaatg 99
            ||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||
Sbjct: 1488 tttttacaagg-aactatacaaacatgtttgcgaaaagaacattttttactagatcaatg 1430

                                                                        
Query: 100  tggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatg----acg 154
            ||||||||||||| ||||||||||||||| | || |||| ||||||||||| |    || 
Sbjct: 1429 tggttcctacaagttggaccctcgtataatcaccaaaaaacatacagggcacgcacgaca 1370

                                                                        
Query: 155  gggcgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcct 214
             | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1369 agtcgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcct 1310

                                                                        
Query: 215  ccccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgt 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 ccccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgt 1250

                                                                        
Query: 275  gggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcgg 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 gggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcgg 1190

                                                                        
Query: 335  catctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggccca 394
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 cgtctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggccca 1130

                                                                        
Query: 395  agaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaa 454
            |||||||||||||||||||||| || ||||| |||||||| |||||||| ||||||||||
Sbjct: 1129 agaaagggtttccaccagatgatccgatcgcgacttgcccaatcttcttactgaacccaa 1070

                                                                        
Query: 455  atctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccag 514
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1069 atctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcactggatgccccag 1010

                                                                        
Query: 515  ttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacag 574
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 ttgtcacattgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacag 950

                                                                        
Query: 575  ccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttg 634
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 949  ccatttggttctctaggtagctcctgctgtacagtccagactcaagcctctcttcgcttg 890

                                                                        
Query: 635  gagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacag 694
            |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 889  gagcaaagaacgtgagcccaccagcttgacctcgaggaatgatggaaatcttggcaacag 830

                                                   
Query: 695  ggtcatattcaggcatcanggcaccgacnagggcatgtc 733
            |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 829  ggtcatattcaggcatcagggcaccgacgagggcatgtc 791



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>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score = 1090 bits (550), Expect = 0.0
 Identities = 658/694 (94%), Gaps = 7/694 (1%)
 Strand = Plus / Minus

                                                                       
Query: 41  tttttacaaggnaactatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 100
           ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755

                                                                       
Query: 101 ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 159
           |||||||||||| ||||||||||| ||| | ||||||| ||||||||      || |  |
Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701

                                                                       
Query: 160 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 219
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641

                                                                       
Query: 220 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 279
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581

                                                                       
Query: 280 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 339
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521

                                                                       
Query: 340 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461

                                                                       
Query: 400 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 459
           |||||||||||||||||||| || || |||||||| |||||||||||||||||||| |||
Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401

                                                                       
Query: 460 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341

                                                                       
Query: 520 acgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 579
           || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 acattgtcttgcccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 281

                                                                       
Query: 580 tggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagca 639
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 280 tggttctctaggtagctcctgctgtacagcccagactcgagcctctcttcgcttggagca 221

                                                                       
Query: 640 aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtca 699
           ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 220 aagaacgtgagcccaccagcttgaccacgaggaatgatggaaatcttggcaacagggtca 161

                                             
Query: 700 tattcaggcatcanggcaccgacnagggcatgtc 733
           ||||||||||||| ||||||||| ||||||||||
Sbjct: 160 tattcaggcatcagggcaccgacgagggcatgtc 127



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>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  930 bits (469), Expect = 0.0
 Identities = 556/583 (95%), Gaps = 4/583 (0%)
 Strand = Plus / Minus

                                                                       
Query: 39  catttttacaaggnaactatacaaacatgtttgcaaaaacaacatttttactagatcaat 98
           ||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||
Sbjct: 582 catttttacaagg-aactatacaaacatgtttgcggaaagaacatttttactagatcaat 524

                                                                       
Query: 99  gtggttcctacaagctggaccctcgtataaccgccgaaaacatacagggcatgacggggc 158
           |||||||||||||  ||||||||||||||| | | ||||||||||| |||| |||  | |
Sbjct: 523 gtggttcctacaacttggaccctcgtataatcacggaaaacatacaaggcacgacaagtc 464

                                                                       
Query: 159 gacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctcccc 218
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctcccc 404

                                                                       
Query: 219 gtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggt 278
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 403 gtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatatcgatgtgggt 344

                                                                       
Query: 279 gttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatc 284

                                                                       
Query: 339 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaa 224

                                                                       
Query: 399 agggttt---ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaa 455
           |||||||   |||||||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 223 agggtttccaccaccagatgacccgattgcgacttgcccaatcttcttgctgaacccaaa 164

                                                                       
Query: 456 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 515
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 104

                                                                       
Query: 516 tgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 575
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 103 tgtcacattgtcttggccaaagataacctcctcggcaaccctgccaccaagtgccacagc 44

                                                      
Query: 576 catttggttctctaggtagctcctgctgtacagtccagactcg 618
           |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 43  catttggttctctaggtagctcctgctgtatagtccagactcg 1



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>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  642 bits (324), Expect = 0.0
 Identities = 505/566 (89%)
 Strand = Plus / Minus

                                                                        
Query: 166  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034

                                                                        
Query: 226  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974

                                                                        
Query: 286  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914

                                                                        
Query: 346  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854

                                                                        
Query: 406  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794

                                                                        
Query: 466  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734

                                                                        
Query: 526  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585
            |||||||||||||||||||| ||||||||||| |||||||| || || ||||||||||||
Sbjct: 1733 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 1674

                                                                        
Query: 586  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645
            |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| 
Sbjct: 1673 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaagaat 1614

                                                                        
Query: 646  gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705
            ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1613 gtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattca 1554

                                      
Query: 706  ggcatcanggcaccgacnagggcatg 731
            ||||| | |||||| || ||||||||
Sbjct: 1553 ggcatgagggcaccaacaagggcatg 1528



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>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score =  642 bits (324), Expect = 0.0
 Identities = 505/566 (89%)
 Strand = Plus / Minus

                                                                        
Query: 166  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090

                                                                        
Query: 226  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030

                                                                        
Query: 286  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970

                                                                        
Query: 346  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 969  tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910

                                                                        
Query: 406  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 909  ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850

                                                                        
Query: 466  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 849  atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790

                                                                        
Query: 526  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585
            |||||||||||||||||||| ||||||||||| |||||||| || || ||||||||||||
Sbjct: 789  tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 730

                                                                        
Query: 586  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645
            |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| 
Sbjct: 729  tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaagaat 670

                                                                        
Query: 646  gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705
            ||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 669  gtgagtccaccagcttgaccacgaggaatgatggaaatcttagcaacagggtcatattca 610

                                      
Query: 706  ggcatcanggcaccgacnagggcatg 731
            ||||| | |||||| || ||||||||
Sbjct: 609  ggcatgagggcaccaacaagggcatg 584



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>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  571 bits (288), Expect = e-159
 Identities = 496/566 (87%)
 Strand = Plus / Minus

                                                                        
Query: 166  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225
            |||||||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386

                                                                        
Query: 226  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285
            |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| 
Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326

                                                                        
Query: 286  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345
            |||||| | || |  ||||||||| |||||||||||||||| |||||||| || || |  
Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266

                                                                        
Query: 346  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 405
            ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206

                                                                        
Query: 406  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 465
            ||||| | |  ||| ||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146

                                                                        
Query: 466  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 525
            || || || ||||||||||| || |||||||||||| |||| || || ||||||||||||
Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086

                                                                        
Query: 526  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 585
            ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 1085 tcttggccaaagatcacctcctcagcaaccctgccaccaagggctacagccatttggttc 1026

                                                                        
Query: 586  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaac 645
            || || |||||||||||||||| |||||| || ||||| |||||||||||||||||||| 
Sbjct: 1025 tcaagatagctcctgctgtacaatccagattctagcctttcttcgcttggagcaaagaat 966

                                                                        
Query: 646  gtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattca 705
            ||||| ||||||||||| || ||||| ||||||||||||||||| || || ||||| || 
Sbjct: 965  gtgagtccaccagcctggccacgagggatgatggaaatcttggctactggatcatactct 906

                                      
Query: 706  ggcatcanggcaccgacnagggcatg 731
            ||||| | ||| ||||| ||||||||
Sbjct: 905  ggcatgagggcgccgacaagggcatg 880



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>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score =  230 bits (116), Expect = 5e-57
 Identities = 296/356 (83%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 414
            ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| |||  |
Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893

                                                                        
Query: 415  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 474
               ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || 
Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833

                                                                        
Query: 475  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 534
            || || ||||| || |||||||| ||| | |||||||||||||| ||||| ||||| |||
Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttgtcca 1773

                                                                        
Query: 535  aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 594
            || || |||||||| ||||||||  |||||||||| || |||||||| ||||||||||||
Sbjct: 1772 aaaataacctcctcagcaaccctttcaccaagtgcaactgccatttgattctctaggtag 1713

                                                                        
Query: 595  ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagacca 654
            |||||||||||||  || ||||| || || |||||||| || |||||||| || ||||||
Sbjct: 1712 ctcctgctgtacaagcccgactcaagtctttcttcgctgggggcaaagaaggtaagacca 1653

                                                                    
Query: 655  ccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            ||||| || ||||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 1652 ccagcttggcctcgaggaattatagatatcttggcaacaggatcatactcgggcat 1597



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  228 bits (115), Expect = 2e-56
 Identities = 158/173 (91%)
 Strand = Plus / Plus

                                                                            
Query: 559      ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618
                |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 30359590 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 30359649

                                                                            
Query: 619      agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678
                |||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 30359650 agcctctcctcgcttggagcaaagaatgtgagtccaccagcttgaccacgaggaatgatg 30359709

                                                                     
Query: 679      gaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggcatg 731
                |||||||| ||||||||||||||||||||||| | |||||| || ||||||||
Sbjct: 30359710 gaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 30359762



 Score =  222 bits (112), Expect = 1e-54
 Identities = 160/176 (90%)
 Strand = Plus / Plus

                                                                            
Query: 384      ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 443
                |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385

                                                                            
Query: 444      gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 503
                |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445

                                                                        
Query: 504      ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 559
                ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 30359446 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 30359501



 Score =  210 bits (106), Expect = 5e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                            
Query: 166      gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225
                |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787

                                                                            
Query: 226      gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285
                ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847

                                                                            
Query: 286      atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345
                |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907

                                                          
Query: 346      tccgccgtggccatcgagtagtccttctggctcgacatctgc 387
                ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949



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>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  228 bits (115), Expect = 2e-56
 Identities = 158/173 (91%)
 Strand = Plus / Plus

                                                                          
Query: 559    ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618
              |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 106185 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 106244

                                                                          
Query: 619    agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678
              |||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||||||
Sbjct: 106245 agcctctcctcgcttggagcaaagaatgtgagtccaccagcttgaccacgaggaatgatg 106304

                                                                   
Query: 679    gaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggcatg 731
              |||||||| ||||||||||||||||||||||| | |||||| || ||||||||
Sbjct: 106305 gaaatcttagcaacagggtcatattcaggcatgagggcaccaacaagggcatg 106357



 Score =  222 bits (112), Expect = 1e-54
 Identities = 160/176 (90%)
 Strand = Plus / Plus

                                                                          
Query: 384    ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 443
              |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980

                                                                          
Query: 444    gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 503
              |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040

                                                                      
Query: 504    ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 559
              ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 106041 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 106096



 Score =  210 bits (106), Expect = 5e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                          
Query: 166    gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 225
              |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382

                                                                          
Query: 226    gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 285
              ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442

                                                                          
Query: 286    atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 345
              |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502

                                                        
Query: 346    tccgccgtggccatcgagtagtccttctggctcgacatctgc 387
              ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544



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>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score =  222 bits (112), Expect = 1e-54
 Identities = 295/356 (82%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 414
            ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| |||  |
Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805

                                                                        
Query: 415  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 474
               || || |||||||| || ||||| |||||||| || ||||| |||||||| || || 
Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745

                                                                        
Query: 475  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 534
            || || ||||| || |||||||| ||  | ||||| ||||| || ||||||||||  |||
Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtcttctcca 1685

                                                                        
Query: 535  aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 594
            || || |||||||| |||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 1684 aaaataacctcctcagcaacccttccaccaagtgcaactgccatttgattctctaggtag 1625

                                                                        
Query: 595  ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagacca 654
            |||||||||||||| || ||||| || || |||||||| || |||||||| |||||||||
Sbjct: 1624 ctcctgctgtacaggcctgactcaagtctttcttcgctgggggcaaagaaggtgagacca 1565

                                                                    
Query: 655  ccagcctgacctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || || || || |||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 1564 ccggcttggccacgaggaattatagatatcttggcaacaggatcatactcgggcat 1509



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>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score =  220 bits (111), Expect = 5e-54
 Identities = 243/287 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1962 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1903

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1902 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1843

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1842 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1783

                                                           
Query: 664  cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 1782 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1736



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201



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>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score =  220 bits (111), Expect = 5e-54
 Identities = 243/287 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1960 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1901

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1900 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1841

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1840 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1781

                                                           
Query: 664  cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 1780 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1734



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199



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>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score =  220 bits (111), Expect = 5e-54
 Identities = 243/287 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1829 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1770

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1769 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1710

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1709 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1650

                                                           
Query: 664  cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 1649 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1603



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068



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>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score =  220 bits (111), Expect = 5e-54
 Identities = 243/287 (84%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1925 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1866

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1865 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1806

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1805 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1746

                                                           
Query: 664  cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 1745 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1699



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164



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>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score =  184 bits (93), Expect = 3e-43
 Identities = 227/271 (83%), Gaps = 3/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 442  ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcg 501
            ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| 
Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtca 1834

                                                                        
Query: 502  ctggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgcca 561
             | || |||||||| || || || || |||||||| |   |||| ||||||||||| || 
Sbjct: 1833 tttgacgccccagtggtgacattatcctggccaaaaa---cctcttcggcaacccttcct 1777

                                                                        
Query: 562  ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 621
            |||||||| || ||||| || ||||| | |||||| || ||||||| ||||||||| |||
Sbjct: 1776 ccaagtgcaaccgccatctgattctccaagtagcttctactgtacaatccagactcaagc 1717

                                                                        
Query: 622  ctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaa 681
            ||||||||||| |||||||| || |||||||||||||| || || ||||| || || || 
Sbjct: 1716 ctctcttcgctaggagcaaaaaaggtgagaccaccagcttggccacgaggtataatagat 1657

                                           
Query: 682  atcttggcaacagggtcatattcaggcatca 712
            |||||||| ||||||||||||||||||||||
Sbjct: 1656 atcttggctacagggtcatattcaggcatca 1626



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>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score =  184 bits (93), Expect = 3e-43
 Identities = 225/269 (83%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1625 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1566

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| |||||||| || |||||||    ||||||||| ||||| ||||||||||| |||
Sbjct: 1565 tcctctgcaacccttccgccaagtgaacaagccatttgattctcaaggtagctcctactg 1506

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1505 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1446

                                         
Query: 664  cctcgaggaatgatggaaatcttggcaac 692
            || ||||||||||| |||||||| |||||
Sbjct: 1445 ccacgaggaatgatagaaatctttgcaac 1417



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>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score =  180 bits (91), Expect = 4e-42
 Identities = 238/287 (82%)
 Strand = Plus / Minus

                                                                        
Query: 424  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || | ||| 
Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccaaacga 1962

                                                                        
Query: 484  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
            || ||||||||||| ||  | ||||| ||||| ||||  || || |  ||||||||||||
Sbjct: 1961 gacacctgcatgaaatcatttgatgctccagtcgtcaaattctcatccccaaagatcacc 1902

                                                                        
Query: 544  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 603
            ||||| | ||  || || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1901 tcctctgaaaaacttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1842

                                                                        
Query: 604  tacagtccagactcgagcctctcttcgcttggagcaaagaacgtgagaccaccagcctga 663
            |||| ||||||||| || || ||||||||||||||||| || ||||| |||||||| || 
Sbjct: 1841 tacaatccagactcaagtctttcttcgcttggagcaaaaaaagtgagcccaccagcttgg 1782

                                                           
Query: 664  cctcgaggaatgatggaaatcttggcaacagggtcatattcaggcat 710
            || ||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 1781 ccacgaggaatgatagaaatctttgcaaccggatcatattctggcat 1735



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200



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>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score =  167 bits (84), Expect = 6e-38
 Identities = 261/320 (81%)
 Strand = Plus / Minus

                                                                        
Query: 391  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000

                                                                        
Query: 451  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1999 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1940

                                                                        
Query: 511  ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 570
            || |||||||| || || |  |||||||||||||| || |||||||| ||||||||||| 
Sbjct: 1939 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1880

                                                                        
Query: 571  acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 630
            ||||||||||||||||| |||||||| ||||| |||| ||| ||||| ||||||||||||
Sbjct: 1879 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1820

                                                                        
Query: 631  cttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggca 690
            || ||||| || || ||||| |||||||| || || || ||||| || || |||||||| 
Sbjct: 1819 ctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatcgatatcttggcc 1760

                                
Query: 691  acagggtcatattcaggcat 710
            || || ||||| || |||||
Sbjct: 1759 actggatcatactccggcat 1740



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>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score =  167 bits (84), Expect = 6e-38
 Identities = 261/320 (81%)
 Strand = Plus / Minus

                                                                        
Query: 391  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926

                                                                        
Query: 451  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1925 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1866

                                                                        
Query: 511  ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 570
            || |||||||| || || |  |||||||||||||| || |||||||| ||||||||||| 
Sbjct: 1865 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1806

                                                                        
Query: 571  acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 630
            ||||||||||||||||| |||||||| ||||| |||| ||| ||||| ||||||||||||
Sbjct: 1805 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1746

                                                                        
Query: 631  cttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggca 690
            || ||||| || || ||||| |||||||| || || || ||||| || || |||||||| 
Sbjct: 1745 ctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatcgatatcttggcc 1686

                                
Query: 691  acagggtcatattcaggcat 710
            || || ||||| || |||||
Sbjct: 1685 actggatcatactccggcat 1666



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>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score =  145 bits (73), Expect = 2e-31
 Identities = 130/149 (87%)
 Strand = Plus / Minus

                                                                         
Query: 562   ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 621
             |||||||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||| || 
Sbjct: 61858 ccaagtgcaacagccatttgattctcaaggtagctcctactgtacaatccagactcaagt 61799

                                                                         
Query: 622   ctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatggaa 681
             || ||||||||||||||||| || ||||| |||||||| || || ||||||||||| |||
Sbjct: 61798 ctttcttcgcttggagcaaaaaaagtgagcccaccagcttggccacgaggaatgatagaa 61739

                                          
Query: 682   atcttggcaacagggtcatattcaggcat 710
             ||||| ||||| || |||||||| |||||
Sbjct: 61738 atctttgcaaccggatcatattctggcat 61710



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                         
Query: 424   gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 483
             |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048

                                                                         
Query: 484   gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 543
             || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 62047 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 61988

                            
Query: 544   tcctcggcaaccctg 558
             ||||| |||||||||
Sbjct: 61987 tcctctgcaaccctg 61973



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 187   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 245
             ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374



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>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds
          Length = 600

 Score =  145 bits (73), Expect = 2e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                       
Query: 559 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618
           ||||| ||||| |||||||| || ||||| ||||| || || ||||||||||||||||||
Sbjct: 581 ccacccagtgcaacagccatctgattctccaggtaacttctactgtacagtccagactcg 522

                                                                       
Query: 619 agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678
           || |||||||| ||||||||||| || || |||||||| || || || || |||||||||
Sbjct: 521 agtctctcttcacttggagcaaaaaaggtaagaccacctgcttggccacggggaatgatg 462

                                                       
Query: 679 gaaatcttggcaacagggtcatattcaggcatcanggcaccgac 722
           || |||||||| |||||||||||||||||||| |  ||||||||
Sbjct: 461 gatatcttggccacagggtcatattcaggcataagtgcaccgac 418



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>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score =  111 bits (56), Expect = 3e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                         
Query: 559   ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 618
             ||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||| ||||| 
Sbjct: 43080 ccaccaagtgcaacagccatttggttctcaaggtagcttctgctatacaatccggactct 43021

                                                                         
Query: 619   agcctctcttcgcttggagcaaagaacgtgagaccaccagcctgacctcgaggaatgatg 678
             |||||||||||||| ||||| || || ||||| |||||||| || || || ||||| || 
Sbjct: 43020 agcctctcttcgctaggagcgaaaaaggtgagcccaccagcttggccacgtggaataatc 42961

                                             
Query: 679   gaaatcttggcaacagggtcatattcaggcat 710
             || |||||||| || || ||||| || |||||
Sbjct: 42960 gatatcttggccactggatcatactccggcat 42929



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 133/167 (79%)
 Strand = Plus / Minus

                                                                         
Query: 391   cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 450
             ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278

                                                                         
Query: 451   ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 510
             || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 43277 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 43218

                                                            
Query: 511   ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccct 557
             || |||||||| || || |  |||||||||||||| || ||||||||
Sbjct: 43217 ccggttgtcacattctcgtctccaaagatcacctcttctgcaaccct 43171



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>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 640    aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatctt 686
              ||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 154880 aagaatgtgagaccacccgcctgaccacgaggaatgatggaaatctt 154926



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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                           
Query: 640     aagaacgtgagaccaccagcctgacctcgaggaatgatggaaatcttggcaacagggtca 699
               |||||||||||||| || || |  || ||||||||||| ||||||||   ||| ||||| 
Sbjct: 1951750 aagaacgtgagaccgccggcattgccgcgaggaatgatcgaaatcttttgaacggggtcg 1951809

                                               
Query: 700     tattcaggcatcanggcaccgacnagggcatg 731
               || ||||||||||  |||||||| ||||||||
Sbjct: 1951810 taatcaggcatcagagcaccgacgagggcatg 1951841



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 507      tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563
                |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 24613541 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 24613597



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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 507   tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563
             |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 39504 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 39560



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>dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E14, full
           insert sequence
          Length = 1443

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563
           |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 617 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 561



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>dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A12, full
           insert sequence
          Length = 1284

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 507 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 563
           |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 564 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 508



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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                          
Query: 670    ggaatgatggaaatcttggcaacagggtcatattcaggcatcanggcaccgacnagggca 729
              ||||||||||| |||||   ||| ||||| || |||||||||| |||||| || ||||||
Sbjct: 305613 ggaatgatggagatcttctgaactgggtcgtagtcaggcatcagggcacccacaagggca 305554

                
Query: 730    tg 731
              ||
Sbjct: 305553 tg 305552



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>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three
              novel genes, complete sequence
          Length = 188728

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 66     tgtttgcaaaaacaacattttt 87
              ||||||||||||||||||||||
Sbjct: 113149 tgtttgcaaaaacaacattttt 113128


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,047,059
Number of Sequences: 3902068
Number of extensions: 5047059
Number of successful extensions: 93649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93489
Number of HSP's gapped (non-prelim): 151
length of query: 733
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 710
effective length of database: 17,143,297,704
effective search space: 12171741369840
effective search space used: 12171741369840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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