ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd23d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L... 234 2e-58
2gb|AY347532.1| Triticum aestivum cultivar Falat ribosomal protei... 234 2e-58
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
4dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
5dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRN... 157 3e-35
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 157 3e-35
7emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494... 157 3e-35
8emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 157 3e-35
9gb|BT016630.1| Zea mays clone Contig463 mRNA sequence 149 7e-33
10gb|BT016900.1| Zea mays clone Contig733 mRNA sequence 149 7e-33
11gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
12gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
13gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
15dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
16dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
17dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
19gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protei... 143 5e-31
20gb|AY343330.1| Triticum aestivum ribosomal protein L3 (RPL3) mRN... 143 5e-31
21gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRN... 143 5e-31
22gb|AY343327.1| Triticum aestivum ribosomal protein L3 (RPL3) mRN... 143 5e-31
23gb|AY111327.1| Zea mays CL1488_-4 mRNA sequence 143 5e-31
24gb|BT016883.1| Zea mays clone Contig716 mRNA sequence 133 4e-28
25gb|AY103608.1| Zea mays PCO139614 mRNA sequence 133 4e-28
26gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA,... 125 1e-25
27gb|BT017815.1| Zea mays clone EL01N0507E03.c mRNA sequence 109 6e-21
28gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete s... 74 4e-10
29gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete se... 74 4e-10
30gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete seq... 74 4e-10
31gb|AY389725.1| Hyacinthus orientalis ribosomal protein L3 mRNA, ... 68 2e-08
32dbj|AK109100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
33gb|AY236158.1| Oryza sativa (indica cultivar-group) ribosomal pr... 52 0.001
34gb|AY395739.1| Nicotiana tabacum ribosomal protein L3B (RPL3B) m... 52 0.001
35ref|XM_547185.2| PREDICTED: Canis familiaris similar to 60S ribo... 46 0.081
36gb|AY395738.1| Nicotiana tabacum ribosomal protein L3A (RPL3A) m... 46 0.081
37gb|AY456411.1| Lycopersicon esculentum ribosomal protein L3 (RPL... 44 0.32
38emb|Y14339.1|LEY14339 Lycopersicon esculentum mRNA for proteasom... 44 0.32
39gb|DQ241849.1| Solanum tuberosum clone 187E04 ribosomal protein ... 44 0.32
40gb|BT011339.1| Drosophila melanogaster RH62603 full insert cDNA 42 1.3
41gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B1402... 42 1.3
42gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B1402... 42 1.3
43emb|BX248310.3| Human DNA sequence from clone DASS-311G1 on chro... 42 1.3
44emb|AL845443.3| Human DNA sequence from clone DAQB-48K1 on chrom... 42 1.3
45ref|NM_169379.1| Drosophila melanogaster Ribosomal protein L3 CG... 42 1.3
46ref|NM_169378.1| Drosophila melanogaster Ribosomal protein L3 CG... 42 1.3
47dbj|AB243054.1| Oncorhynchus mykiss mRNA for sex hormone-binding... 42 1.3
48ref|NM_079592.2| Drosophila melanogaster Ribosomal protein L3 CG... 42 1.3
49gb|AC006491.24|AC006491 Drosophila melanogaster, chromosome 3R, ... 42 1.3
50gb|AE003690.3| Drosophila melanogaster chromosome 3R, section 28... 42 1.3
51gb|DQ206600.1| Monosiga brevicollis isolate TOA20 ribosomal prot... 42 1.3
52gb|AC004204.1|AC004204 Homo sapiens clone UWGC:y3c018 from 6p21,... 42 1.3
53gb|AF016835.1|AF016835 Drosophila melanogaster ribosomal protein... 42 1.3
54emb|BX957222.1| Methanococcus maripaludis S2 complete genome; se... 40 5.0
55emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 ... 40 5.0 
>gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA,
            RPL3-B3 allele, complete cds
          Length = 1170

 Score =  234 bits (118), Expect = 2e-58
 Identities = 170/190 (89%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtg 243
            |||||||||||||||||| |||||||||||||||||||| |||| |||||| ||  ||||
Sbjct: 1170 tcaagccttgagcttgccgtagaacctctgcttctcgtccgtggtctggaagcgaccgtg 1111

                                                                        
Query: 244  cccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgaga 303
            ||| |||||||||||||||||||| ||||||||||||||  ||||||| || ||||||||
Sbjct: 1110 cccgaacttggaagaggtgtcgacgaacttgagcttgatctcctccagggcaagacgaga 1051

                                                                        
Query: 304  ggtctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagta 363
            ||||||||||| ||||||||||| |||||||||||||||||| || || || |||||| |
Sbjct: 1050 ggtctgcttcagcagggactggcggagggtcaccacacgcttcttggggccaacacagca 991

                      
Query: 364  tnccttgatc 373
            | ||||||||
Sbjct: 990  tcccttgatc 981
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>gb|AY347532.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA,
            RPL3-B3 allele, complete cds
          Length = 1170

 Score =  234 bits (118), Expect = 2e-58
 Identities = 170/190 (89%)
 Strand = Plus / Minus

                                                                        
Query: 184  tcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtg 243
            |||||||||||||||||| |||||||||||||||||||| |||| |||||| ||  ||||
Sbjct: 1170 tcaagccttgagcttgccgtagaacctctgcttctcgtccgtggtctggaagcgaccgtg 1111

                                                                        
Query: 244  cccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgaga 303
            ||| |||||||||||||||||||| ||||||||||||||  ||||||| || ||||||||
Sbjct: 1110 cccgaacttggaagaggtgtcgacgaacttgagcttgatctcctccagggcaagacgaga 1051

                                                                        
Query: 304  ggtctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagta 363
            ||||||||||| ||||||||||| |||||||||||||||||| || || || |||||| |
Sbjct: 1050 ggtctgcttcagcagggactggcggagggtcaccacacgcttcttggggccaacacagca 991

                      
Query: 364  tnccttgatc 373
            | ||||||||
Sbjct: 990  tcccttgatc 981
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                           
Query: 188     gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
               ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 3430577 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 3430518

                                                                           
Query: 248     aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
               |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 3430517 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 3430458

                                         
Query: 308     tgcttcancagggactggcngagggt 333
               ||||||| ||| ||||||| ||||||
Sbjct: 3430457 tgcttcagcagcgactggcggagggt 3430432
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>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full
            insert sequence
          Length = 1468

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                        
Query: 188  gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
            ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 1229 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 1170

                                                                        
Query: 248  aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
            |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 1169 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 1110

                                      
Query: 308  tgcttcancagggactggcngagggt 333
            ||||||| ||| ||||||| ||||||
Sbjct: 1109 tgcttcagcagcgactggcggagggt 1084
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>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3,
            complete cds
          Length = 1368

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                        
Query: 188  gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
            ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 1187 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 1128

                                                                        
Query: 248  aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
            |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 1127 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 1068

                                      
Query: 308  tgcttcancagggactggcngagggt 333
            ||||||| ||| ||||||| ||||||
Sbjct: 1067 tgcttcagcagcgactggcggagggt 1042
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                           
Query: 188     gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
               ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 3430518 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 3430459

                                                                           
Query: 248     aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
               |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 3430458 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 3430399

                                         
Query: 308     tgcttcancagggactggcngagggt 333
               ||||||| ||| ||||||| ||||||
Sbjct: 3430398 tgcttcagcagcgactggcggagggt 3430373
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>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 116371

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Plus

                                                                          
Query: 188    gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
              ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 101342 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 101401

                                                                          
Query: 248    aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
              |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 101402 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 101461

                                        
Query: 308    tgcttcancagggactggcngagggt 333
              ||||||| ||| ||||||| ||||||
Sbjct: 101462 tgcttcagcagcgactggcggagggt 101487
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  157 bits (79), Expect = 3e-35
 Identities = 128/146 (87%)
 Strand = Plus / Minus

                                                                          
Query: 188    gccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgccca 247
              ||||||||||||||  |||||||||||||||||||||||| |||||| ||  ||||||| 
Sbjct: 109630 gccttgagcttgccgaagaacctctgcttctcgtcggtggtctggaagcgaccgtgcccg 109571

                                                                          
Query: 248    aacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtc 307
              |||||||| ||||||||||  ||||||||||||||  ||||||| ||||| || ||||||
Sbjct: 109570 aacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcgagccgcgaggtc 109511

                                        
Query: 308    tgcttcancagggactggcngagggt 333
              ||||||| ||| ||||||| ||||||
Sbjct: 109510 tgcttcagcagcgactggcggagggt 109485
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>gb|BT016630.1| Zea mays clone Contig463 mRNA sequence
          Length = 1432

 Score =  149 bits (75), Expect = 7e-33
 Identities = 166/199 (83%)
 Strand = Plus / Minus

                                                                        
Query: 175  cgcagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaa 234
            ||||||| || | ||||||||||| ||| |||||||||||||||| ||||| | ||||||
Sbjct: 1240 cgcagcaccttacgccttgagcttaccaaagaacctctgcttctcatcggtagtctggaa 1181

                                                                        
Query: 235  acggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgc 294
             ||  |||||||||| ||||| || |||||||  ||||||||||||||  ||||||| ||
Sbjct: 1180 gcgaccgtgcccaaatttggacgatgtgtcgatgaacttgagcttgatctcctccagcgc 1121

                                                                        
Query: 295  gagacgagaggtctgcttcancagggactggcngagggtcaccacacgcttntttggncc 354
             || || || ||||||||||  |||||||||| |||||||||||| | ||| ||||| ||
Sbjct: 1120 cagccgggaagtctgcttcaggagggactggcggagggtcaccaccctcttctttggacc 1061

                               
Query: 355  gacacagtatnccttgatc 373
             |||||| || ||||||||
Sbjct: 1060 cacacagcatcccttgatc 1042
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>gb|BT016900.1| Zea mays clone Contig733 mRNA sequence
          Length = 707

 Score =  149 bits (75), Expect = 7e-33
 Identities = 166/199 (83%)
 Strand = Plus / Plus

                                                                       
Query: 175 cgcagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaa 234
           ||||||| || | ||||||||||| ||| |||||||||||||||| ||||| | ||||||
Sbjct: 458 cgcagcaccttacgccttgagcttaccaaagaacctctgcttctcatcggtagtctggaa 517

                                                                       
Query: 235 acggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgc 294
            ||  |||||||||| ||||| || |||||||  ||||||||||||||  ||||||| ||
Sbjct: 518 gcgaccgtgcccaaatttggacgatgtgtcgatgaacttgagcttgatctcctccagcgc 577

                                                                       
Query: 295 gagacgagaggtctgcttcancagggactggcngagggtcaccacacgcttntttggncc 354
            || || || ||||||||||  |||||||||| |||||||||||| | ||| ||||| ||
Sbjct: 578 cagccgggaagtctgcttcaggagggactggcggagggtcaccaccctcttctttggacc 637

                              
Query: 355 gacacagtatnccttgatc 373
            |||||| || ||||||||
Sbjct: 638 cacacagcatcccttgatc 656
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                         
Query: 186   aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
             ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 37787 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 37846

                                                                         
Query: 246   caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
             | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 37847 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 37906

                                         
Query: 306   tctgcttcancagggactggcngagggt 333
             ||||||| | ||||||||||| ||||||
Sbjct: 37907 tctgcttgagcagggactggcggagggt 37934
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23
              map near R10571S, complete sequence
          Length = 161073

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                          
Query: 186    aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
              ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 137088 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 137147

                                                                          
Query: 246    caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
              | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 137148 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 137207

                                          
Query: 306    tctgcttcancagggactggcngagggt 333
              ||||||| | ||||||||||| ||||||
Sbjct: 137208 tctgcttgagcagggactggcggagggt 137235
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>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence
          Length = 42748

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                         
Query: 186   aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
             ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 31413 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 31354

                                                                         
Query: 246   caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
             | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 31353 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 31294

                                         
Query: 306   tctgcttcancagggactggcngagggt 333
             ||||||| | ||||||||||| ||||||
Sbjct: 31293 tctgcttgagcagggactggcggagggt 31266
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                           
Query: 186     aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
               ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 3277198 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 3277139

                                                                           
Query: 246     caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
               | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 3277138 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 3277079

                                           
Query: 306     tctgcttcancagggactggcngagggt 333
               ||||||| | ||||||||||| ||||||
Sbjct: 3277078 tctgcttgagcagggactggcggagggt 3277051
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>dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040J04, full
            insert sequence
          Length = 1403

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 1244 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 1185

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 1184 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 1125

                                        
Query: 306  tctgcttcancagggactggcngagggt 333
            ||||||| | ||||||||||| ||||||
Sbjct: 1124 tctgcttgagcagggactggcggagggt 1097
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>dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A07, full
            insert sequence
          Length = 1433

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 1222 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 1163

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 1162 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 1103

                                        
Query: 306  tctgcttcancagggactggcngagggt 333
            ||||||| | ||||||||||| ||||||
Sbjct: 1102 tctgcttgagcagggactggcggagggt 1075
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>dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E13, full
            insert sequence
          Length = 1486

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 1261 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 1202

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 1201 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 1142

                                        
Query: 306  tctgcttcancagggactggcngagggt 333
            ||||||| | ||||||||||| ||||||
Sbjct: 1141 tctgcttgagcagggactggcggagggt 1114
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  145 bits (73), Expect = 1e-31
 Identities = 128/148 (86%)
 Strand = Plus / Minus

                                                                           
Query: 186     aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
               ||||||||||||||||  |||||||||| ||||||||||||| |||||| ||  ||||||
Sbjct: 3285911 aagccttgagcttgccgaagaacctctgtttctcgtcggtggtctggaagcgaccgtgcc 3285852

                                                                           
Query: 246     caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
               | |||||||| ||||||||||  ||||||||||||||  |||| || || | ||||||||
Sbjct: 3285851 cgaacttggacgaggtgtcgatgaacttgagcttgatctcctcgagcgccaaacgagagg 3285792

                                           
Query: 306     tctgcttcancagggactggcngagggt 333
               ||||||| | ||||||||||| ||||||
Sbjct: 3285791 tctgcttgagcagggactggcggagggt 3285764
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>gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA,
            RPL3-A2 allele, complete cds
          Length = 1170

 Score =  143 bits (72), Expect = 5e-31
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            |||||||||||||||| |||||| |||||||||||||||||| |||||| ||| | ||||
Sbjct: 1168 aagccttgagcttgccgtagaacttctgcttctcgtcggtggtctggaaccggccatgcc 1109

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            ||||||| || ||||||||||  ||||||||||||||  |||| || || |  || || |
Sbjct: 1108 caaactttgatgaggtgtcgatgaacttgagcttgatctcctcaagggccaaccgcgacg 1049

                                                                        
Query: 306  tctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagtatn 365
            ||||||| | ||||||||||| |||||||||||| | ||| || || || |||||| |  
Sbjct: 1048 tctgctttaacagggactggcggagggtcaccactctcttcttggggcccacacagcagc 989

                    
Query: 366  ccttgatc 373
            ||||||||
Sbjct: 988  ccttgatc 981
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>gb|AY343330.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele,
            complete cds
          Length = 1170

 Score =  143 bits (72), Expect = 5e-31
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            ||||||||||| |||| |||||| ||||||||||||| |||| |||||| ||| | ||||
Sbjct: 1168 aagccttgagcctgccgtagaacttctgcttctcgtcagtggtctggaaccggccatgcc 1109

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            | |||||||| ||||||||||  ||||||||||||||  |||| || || |  || ||||
Sbjct: 1108 cgaacttggatgaggtgtcgatgaacttgagcttgatctcctcaagggccaaccgcgagg 1049

                                                                        
Query: 306  tctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagtatn 365
            ||||||||| ||||||||||| |||||||||||| | ||| || || || |||||| |  
Sbjct: 1048 tctgcttcaacagggactggcggagggtcaccactctcttcttggggcccacacagcagc 989

                    
Query: 366  ccttgatc 373
            ||||||||
Sbjct: 988  ccttgatc 981
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>gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele,
            complete cds
          Length = 1170

 Score =  143 bits (72), Expect = 5e-31
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            |||||||||||||||| |||||| |||||||||||||||||| |||||| ||| | ||||
Sbjct: 1168 aagccttgagcttgccgtagaacttctgcttctcgtcggtggtctggaaccggccatgcc 1109

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            ||||||| || ||||||||||  ||||||||||||||  |||| || || |  || || |
Sbjct: 1108 caaactttgatgaggtgtcgatgaacttgagcttgatctcctcaagggccaaccgcgacg 1049

                                                                        
Query: 306  tctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagtatn 365
            ||||||| | ||||||||||| |||||||||||| | ||| || || || |||||| |  
Sbjct: 1048 tctgctttaacagggactggcggagggtcaccactctcttcttggggcccacacagcagc 989

                    
Query: 366  ccttgatc 373
            ||||||||
Sbjct: 988  ccttgatc 981
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>gb|AY343327.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele,
            complete cds
          Length = 1170

 Score =  143 bits (72), Expect = 5e-31
 Identities = 157/188 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
            ||||||||||| |||| |||||| ||||||||||||| |||| |||||| ||| | ||||
Sbjct: 1168 aagccttgagcctgccgtagaacttctgcttctcgtcagtggtctggaaccggccatgcc 1109

                                                                        
Query: 246  caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
            | |||||||| ||||||||||  ||||||||||||||  |||| || || |  || ||||
Sbjct: 1108 cgaacttggatgaggtgtcgatgaacttgagcttgatctcctcaagggccaaccgcgagg 1049

                                                                        
Query: 306  tctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacagtatn 365
            ||||||||| ||||||||||| |||||||||||| | ||| || || || |||||| |  
Sbjct: 1048 tctgcttcaacagggactggcggagggtcaccactctcttcttggggcccacacagcagc 989

                    
Query: 366  ccttgatc 373
            ||||||||
Sbjct: 988  ccttgatc 981
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>gb|AY111327.1| Zea mays CL1488_-4 mRNA sequence
          Length = 615

 Score =  143 bits (72), Expect = 5e-31
 Identities = 139/163 (85%)
 Strand = Plus / Minus

                                                                       
Query: 177 cagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaac 236
           ||||| |||| ||||||||||||||| ||||||||||||||||||| |||| |||||| |
Sbjct: 446 cagcaactcaggccttgagcttgccaaagaacctctgcttctcgtctgtggactggaagc 387

                                                                       
Query: 237 ggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcga 296
           |  | || ||||||||||| ||||||||||  ||||||||||||||  ||||||| || |
Sbjct: 386 gcccatgtccaaacttggacgaggtgtcgatgaacttgagcttgatctcctccagggcca 327

                                                      
Query: 297 gacgagaggtctgcttcancagggactggcngagggtcaccac 339
             ||||| |||||||||| ||| ||||||| ||| ||||||||
Sbjct: 326 accgagacgtctgcttcagcagagactggcggagagtcaccac 284
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>gb|BT016883.1| Zea mays clone Contig716 mRNA sequence
          Length = 569

 Score =  133 bits (67), Expect = 4e-28
 Identities = 164/199 (82%)
 Strand = Plus / Plus

                                                                       
Query: 175 cgcagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaa 234
           ||||||| || | ||||||||||| ||| | |||||||||||||| ||||| | ||||||
Sbjct: 230 cgcagcaccttacgccttgagcttaccaaaaaacctctgcttctcatcggtagtctggaa 289

                                                                       
Query: 235 acggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgc 294
            ||  |||||||||| ||||| || |||||||  ||||||||||||||  ||||||| ||
Sbjct: 290 gcgaccgtgcccaaatttggacgatgtgtcgatgaacttgagcttgatctcctccagcgc 349

                                                                       
Query: 295 gagacgagaggtctgcttcancagggactggcngagggtcaccacacgcttntttggncc 354
            || || || ||||||||||  |||||||||| |||||||||||| | ||| ||||| ||
Sbjct: 350 cagccgggaagtctgcttcaggagggactggcggagggtcaccaccctcttctttggacc 409

                              
Query: 355 gacacagtatnccttgatc 373
            |||||  || ||||||||
Sbjct: 410 cacacaacatcccttgatc 428
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>gb|AY103608.1| Zea mays PCO139614 mRNA sequence
          Length = 1714

 Score =  133 bits (67), Expect = 4e-28
 Identities = 164/199 (82%)
 Strand = Plus / Minus

                                                                        
Query: 175  cgcagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaa 234
            ||||||| || | ||||||||||| ||| |||||||||||||||| ||||| | ||||||
Sbjct: 1304 cgcagcaccttacgccttgagcttaccaaagaacctctgcttctcatcggtagtctggaa 1245

                                                                        
Query: 235  acggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgc 294
             ||  | |||||||| ||||| || |||||||  ||||||||||||||  ||||||| ||
Sbjct: 1244 gcgaccatgcccaaatttggacgatgtgtcgatgaacttgagcttgatctcctccagcgc 1185

                                                                        
Query: 295  gagacgagaggtctgcttcancagggactggcngagggtcaccacacgcttntttggncc 354
             || || || ||||||||||  |||||||||| |||||||||||| | ||| ||||| ||
Sbjct: 1184 cagccgggaagtctgcttcaggagggactggcggagggtcaccaccctcttctttggacc 1125

                               
Query: 355  gacacagtatnccttgatc 373
             |||||| |  ||||||||
Sbjct: 1124 cacacagcagcccttgatc 1106
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>gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA, partial cds
          Length = 855

 Score =  125 bits (63), Expect = 1e-25
 Identities = 130/154 (84%)
 Strand = Plus / Minus

                                                                       
Query: 186 aagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcc 245
           |||||||||||||||| |||||| |||||||||||||||||| |||||| ||  | ||||
Sbjct: 661 aagccttgagcttgccgtagaacttctgcttctcgtcggtggtctggaatcgaccatgcc 602

                                                                       
Query: 246 caaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagagg 305
           |||||||||| |||| ||| |||||||| ||||||||  |||| || || |  || || |
Sbjct: 601 caaacttggatgaggggtcaacaaacttaagcttgatctcctcgagagccaagcgggaag 542

                                             
Query: 306 tctgcttcancagggactggcngagggtcaccac 339
           |||||||||  |||||||||| |||||| |||||
Sbjct: 541 tctgcttcaggagggactggcggagggtaaccac 508
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>gb|BT017815.1| Zea mays clone EL01N0507E03.c mRNA sequence
          Length = 1343

 Score =  109 bits (55), Expect = 6e-21
 Identities = 161/199 (80%)
 Strand = Plus / Minus

                                                                        
Query: 175  cgcagcagctcaagccttgagcttgccatagaacctctgcttctcgtcggtggnctggaa 234
            ||||||| || | |||||| |||||||| | |||||||||||||| ||||| | ||||||
Sbjct: 1147 cgcagcaccttacgccttgggcttgccaaaaaacctctgcttctcatcggtagtctggaa 1088

                                                                        
Query: 235  acggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgc 294
             ||  |||||||||| ||||| || |||||||  ||||||||||||||  ||||||  ||
Sbjct: 1087 gcgaccgtgcccaaatttggacgatgtgtcgatgaacttgagcttgatctcctccaacgc 1028

                                                                        
Query: 295  gagacgagaggtctgcttcancagggactggcngagggtcaccacacgcttntttggncc 354
             || || || ||||||||||  |||||||||  |||||||||||| |  || ||||| ||
Sbjct: 1027 cagccgggaagtctgcttcaggagggactgggggagggtcaccacccttttttttggacc 968

                               
Query: 355  gacacagtatnccttgatc 373
             |||||| |  ||||||||
Sbjct: 967  cacacagcagcccttgatc 949
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>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence
          Length = 125121

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 229  ctggaaacggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctc 288
            |||||||||  | || ||||||||||||||||| |||| ||||||||| |||||  ||||
Sbjct: 9321 ctggaaacgaccatgtccaaacttggaagaggtatcgataaacttgagtttgatatcctc 9262

                                                  
Query: 289  cagtgcgagacgagaggtctgcttcancagggactggc 326
             || || |||||||| |||||||| |  ||||||||||
Sbjct: 9261 aagagcaagacgagaagtctgcttaagaagggactggc 9224
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>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence
          Length = 103966

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 229 ctggaaacggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctc 288
           |||||||||  | || ||||||||||||||||| |||| ||||||||| |||||  ||||
Sbjct: 38  ctggaaacgaccatgtccaaacttggaagaggtatcgataaacttgagtttgatatcctc 97

                                                 
Query: 289 cagtgcgagacgagaggtctgcttcancagggactggc 326
            || || |||||||| |||||||| |  ||||||||||
Sbjct: 98  aagagcaagacgagaagtctgcttaagaagggactggc 135
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>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence
          Length = 113200

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                         
Query: 229   ctggaaacggncgtgcccaaacttggaagaggtgtcgacaaacttgagcttgattncctc 288
             |||||||||  | || ||||||||||||||||| |||| ||||||||| |||||  ||||
Sbjct: 99601 ctggaaacgaccatgtccaaacttggaagaggtatcgataaacttgagtttgatatcctc 99542

                                                   
Query: 289   cagtgcgagacgagaggtctgcttcancagggactggc 326
              || || |||||||| |||||||| |  ||||||||||
Sbjct: 99541 aagagcaagacgagaagtctgcttaagaagggactggc 99504
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>gb|AY389725.1| Hyacinthus orientalis ribosomal protein L3 mRNA, partial cds
          Length = 875

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 251 ttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtctgc 310
           ||||| || |||||||  ||||||||||||||| ||||||| || |  || |||||||||
Sbjct: 730 ttggatgatgtgtcgatgaacttgagcttgatttcctccagagccaagcgggaggtctgc 671

                           
Query: 311 ttcancagggactggc 326
           |||| |||||||||||
Sbjct: 670 ttcagcagggactggc 655
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>dbj|AK109100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-B01, full
            insert sequence
          Length = 1470

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  gcttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtcgacaaact 272
            |||||||||||  || |||||| ||  |||| || |||||||| || ||||| |||||||
Sbjct: 1179 gcttctcgtcgtaggtctggaagcgaccgtggccgaacttggatgatgtgtccacaaact 1120

                               
Query: 273  tgagcttgattncctccag 291
            ||||||||||  |||||||
Sbjct: 1119 tgagcttgatctcctccag 1101
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>gb|AY236158.1| Oryza sativa (indica cultivar-group) ribosomal protein L3B mRNA,
            partial cds
          Length = 1035

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 298  acgagaggtctgcttcancagggactggcngagggt 333
            ||||||||||||||| | ||||||||||| ||||||
Sbjct: 1023 acgagaggtctgcttgagcagggactggcggagggt 988
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>gb|AY395739.1| Nicotiana tabacum ribosomal protein L3B (RPL3B) mRNA, complete cds
          Length = 1487

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                        
Query: 245  ccaaacttggaagaggtgtcgacaaacttgagcttgattncctccagtgcgagacgagag 304
            ||||||||||| || ||||| |  ||||||||||||||  |||||| ||| |  | ||| 
Sbjct: 1237 ccaaacttggaggatgtgtcaatgaacttgagcttgatctcctccaatgcaaccctagat 1178

                                                                     
Query: 305  gtctgcttcancagggactggcngagggtcaccacacgcttntttggnccgacacag 361
            ||||| |||| ||| ||||| |  || ||||| |||||||| ||||| || ||||||
Sbjct: 1177 gtctgattcaacagagactgcctcagagtcacaacacgcttctttggtccaacacag 1121
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>ref|XM_547185.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L3-like
            (LOC490065), mRNA
          Length = 1733

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 229  ctggaaacggncgtgcccaaacttggaagaggtgtcgacaaacttgagct 278
            |||||| ||| |||| ||||||||||| | ||||||||  ||||||||||
Sbjct: 1401 ctggaagcggccgtggccaaacttggaggtggtgtcgatgaacttgagct 1352
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>gb|AY395738.1| Nicotiana tabacum ribosomal protein L3A (RPL3A) mRNA, complete cds
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 135/175 (77%)
 Strand = Plus / Minus

                                                                        
Query: 199  gccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcccaaacttggaaga 258
            |||||||||  |||||||||| |  |||| |||||| ||  | || |||||||| || ||
Sbjct: 1208 gccatagaatttctgcttctcttgagtggtctggaagcgaccatgtccaaactttgagga 1149

                                                                        
Query: 259  ggtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtctgcttcancag 318
             || ||||  ||||| ||||| ||  |||| || |||| |||||||||||| || | |||
Sbjct: 1148 tgtatcgatgaacttcagcttaatctcctcaagagcgacacgagaggtctggttgagcag 1089

                                                                   
Query: 319  ggactggcngagggtcaccacacgcttntttggnccgacacagtatnccttgatc 373
            |||||| |  ||||| || || | ||| || || || |||||| || ||||||||
Sbjct: 1088 ggactgacgaagggttacaaccctcttcttaggaccaacacagcatcccttgatc 1034
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>gb|AY456411.1| Lycopersicon esculentum ribosomal protein L3 (RPL3) mRNA, complete
            cds
          Length = 1387

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 200  ccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcccaaacttggaagag 259
            ||||||||  |||||||||| | ||||| |||||| ||  | || ||||||||||| || 
Sbjct: 1188 ccatagaatttctgcttctcttgggtggtctggaagcgaccatgtccaaacttggaggat 1129

                                
Query: 260  gtgtcgacaaacttgagctt 279
            |||||||  ||||| |||||
Sbjct: 1128 gtgtcgatgaacttcagctt 1109
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>emb|Y14339.1|LEY14339 Lycopersicon esculentum mRNA for proteasome, alpha subunit
          Length = 1686

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 200  ccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcccaaacttggaagag 259
            ||||||||  |||||||||| | ||||| |||||| ||  | || ||||||||||| || 
Sbjct: 1463 ccatagaatttctgcttctcttgggtggtctggaagcgaccatgtccaaacttggaggat 1404

                                
Query: 260  gtgtcgacaaacttgagctt 279
            |||||||  ||||| |||||
Sbjct: 1403 gtgtcgatgaacttcagctt 1384
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>gb|DQ241849.1| Solanum tuberosum clone 187E04 ribosomal protein L3-like mRNA,
            complete cds
          Length = 1434

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 200  ccatagaacctctgcttctcgtcggtggnctggaaacggncgtgcccaaacttggaagag 259
            ||||||||  |||||||||| | ||||| |||||| ||  | || |||||||| || || 
Sbjct: 1205 ccatagaatttctgcttctcttgggtggtctggaagcgaccatgtccaaactttgaggat 1146

                                                                        
Query: 260  gtgtcgacaaacttgagcttgattncctccagtgcgagacgagaggtctgcttcancagg 319
            |||||||  ||||| ||||| ||  |||| || || | |||||||||||| || | ||||
Sbjct: 1145 gtgtcgatgaacttcagcttaatctcctcaagagcaacacgagaggtctggttgagcagg 1086

              
Query: 320  ga 321
            ||
Sbjct: 1085 ga 1084
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>gb|BT011339.1| Drosophila melanogaster RH62603 full insert cDNA
          Length = 1396

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 250  cttggaagaggtgtcgacaaacttgagcttgat 282
            |||||| ||||||||||  ||||||||||||||
Sbjct: 1153 cttggacgaggtgtcgatgaacttgagcttgat 1121
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>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic
              sequence
          Length = 363675

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                                 
Query: 214    cttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtc 264
              |||||| || |||| |||||| ||| | || ||||||||||| ||||||||
Sbjct: 110846 cttctcctccgtggtctggaagcggccatggccaaacttggaggaggtgtc 110896
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>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic
             sequence
          Length = 336776

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                                
Query: 214   cttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtc 264
             |||||| || |||| |||||| ||| | || ||||||||||| ||||||||
Sbjct: 89950 cttctcctccgtggtctggaagcggccatggccaaacttggaggaggtgtc 90000
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>emb|BX248310.3| Human DNA sequence from clone DASS-311G1 on chromosome 6, complete
             sequence
          Length = 116320

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 43/51 (84%)
 Strand = Plus / Minus

                                                                
Query: 214   cttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtc 264
             |||||| || |||| |||||| ||| | || ||||||||||| ||||||||
Sbjct: 18173 cttctcctccgtggtctggaagcggccatggccaaacttggaggaggtgtc 18123
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>emb|AL845443.3| Human DNA sequence from clone DAQB-48K1 on chromosome 6 Contains the
            USP8P pseudogene for ubiquitin specific protease 8, the
            RPL3P2 pseudogene for ribosomal protein L3 pseudogene 2,
            the WASF5P pseudogene for WAS protein family, member 5,
            the HLA-B gene for major histocompatibility complex,
            class I, B, the DHFRP2 pseudogene for dihydrofolate
            reductase 2, the FGFR3P pseudogene for fibroblast growth
            factor receptor 3, the HLA-S gene for major
            histocompatibility complex, class I, S, the MICA gene for
            MHC class I polypeptide-related sequence A and 3 CpG
            islands, complete sequence
          Length = 148076

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 43/51 (84%)
 Strand = Plus / Minus

                                                               
Query: 214  cttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtc 264
            |||||| || |||| |||||| ||| | || ||||||||||| ||||||||
Sbjct: 9600 cttctcctccgtggtctggaagcggccatggccaaacttggaggaggtgtc 9550
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>ref|NM_169379.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RE, transcript
            variant E (RpL3), mRNA
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 250  cttggaagaggtgtcgacaaacttgagcttgat 282
            |||||| ||||||||||  ||||||||||||||
Sbjct: 1372 cttggacgaggtgtcgatgaacttgagcttgat 1340
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>ref|NM_169378.1| Drosophila melanogaster Ribosomal protein L3 CG4863-RB, transcript
            variant B (RpL3), mRNA
          Length = 1579

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 250  cttggaagaggtgtcgacaaacttgagcttgat 282
            |||||| ||||||||||  ||||||||||||||
Sbjct: 1122 cttggacgaggtgtcgatgaacttgagcttgat 1090
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>dbj|AB243054.1| Oncorhynchus mykiss mRNA for sex hormone-binding globulin, complete
           cds
          Length = 3485

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 229 ctggaaacggncgtgcccaaacttggaagaggtgtcgacaaacttgag 276
           |||||| ||| |||| ||||||||||| | ||||||||  ||||||||
Sbjct: 157 ctggaagcggccgtggccaaacttggaggtggtgtcgatgaacttgag 204
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>ref|NM_079592.2| Drosophila melanogaster Ribosomal protein L3 CG4863-RA, transcript
            variant A (RpL3), mRNA
          Length = 1610

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 250  cttggaagaggtgtcgacaaacttgagcttgat 282
            |||||| ||||||||||  ||||||||||||||
Sbjct: 1153 cttggacgaggtgtcgatgaacttgagcttgat 1121
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>gb|AC006491.24|AC006491 Drosophila melanogaster, chromosome 3R, region 86D1-86E1, BAC clone
              BACR48M21, complete sequence
          Length = 164386

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 250    cttggaagaggtgtcgacaaacttgagcttgat 282
              |||||| ||||||||||  ||||||||||||||
Sbjct: 113204 cttggacgaggtgtcgatgaacttgagcttgat 113172
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>gb|AE003690.3| Drosophila melanogaster chromosome 3R, section 28 of 118 of the complete
              sequence
          Length = 170298

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 250    cttggaagaggtgtcgacaaacttgagcttgat 282
              |||||| ||||||||||  ||||||||||||||
Sbjct: 138429 cttggacgaggtgtcgatgaacttgagcttgat 138397
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>gb|DQ206600.1| Monosiga brevicollis isolate TOA20 ribosomal protein 3 large
           subunit mRNA, partial cds
          Length = 995

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 240 cgtgcccaaacttggaagaggtgtcgacaaacttgag 276
           |||| ||||||||||| ||||||||||  ||||||||
Sbjct: 982 cgtggccaaacttggacgaggtgtcgatgaacttgag 946
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>gb|AC004204.1|AC004204 Homo sapiens clone UWGC:y3c018 from 6p21, complete sequence
          Length = 46797

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                                
Query: 214   cttctcgtcggtggnctggaaacggncgtgcccaaacttggaagaggtgtc 264
             |||||| || |||| |||||| ||| | || ||||||||||| ||||||||
Sbjct: 20416 cttctcctccgtggtctggaagcggccatggccaaacttggaggaggtgtc 20466
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>gb|AF016835.1|AF016835 Drosophila melanogaster ribosomal protein L3 (RpL3) mRNA, complete
            cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 250  cttggaagaggtgtcgacaaacttgagcttgat 282
            |||||| ||||||||||  ||||||||||||||
Sbjct: 1152 cttggacgaggtgtcgatgaacttgagcttgat 1120
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>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5
          Length = 349607

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 67     acaaattnatagaagatagattc 89
              ||||||| |||||||||||||||
Sbjct: 194654 acaaattaatagaagatagattc 194676
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>emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 in linkage group 18,
             complete sequence
          Length = 138838

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatagcacatgacacaaatt 73
             ||||||||||||||||||||
Sbjct: 89077 aatagcacatgacacaaatt 89096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,736,846
Number of Sequences: 3902068
Number of extensions: 1736846
Number of successful extensions: 27993
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27884
Number of HSP's gapped (non-prelim): 105
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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