Clone Information

BLAST Search Result

Clone Name	rbasd23a23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	155	1e-37
2	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	154	2e-37
3	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	154	2e-37
4	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	150	4e-36
5	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	149	5e-36
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	120	2e-27
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	120	2e-27
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	120	2e-27
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	120	2e-27
10	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	119	9e-27
11	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	113	4e-25
12	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	113	4e-25
13	CDC48_YEAST (P25694) Cell division control protein 48	78	2e-14
14	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	74	2e-13
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	54	3e-07
16	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	46	9e-05
17	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	45	1e-04
18	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	39	0.015
19	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	38	0.026
20	VAT_THEAC (O05209) VCP-like ATPase	37	0.044
21	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	37	0.044
22	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	37	0.044
23	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	37	0.044
24	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	37	0.057
25	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	37	0.057
26	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	37	0.057
27	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	37	0.057
28	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	37	0.057
29	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	37	0.057
30	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	35	0.22
31	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	35	0.22
32	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	35	0.22
33	SAV_SULAC (Q07590) SAV protein	33	0.49
34	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	33	0.49
35	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	33	0.64
36	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	33	0.83
37	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	33	0.83
38	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	33	0.83
39	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	33	0.83
40	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	33	0.83
41	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	33	0.83
42	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	32	1.1
43	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	32	1.1
44	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	32	1.1
45	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	32	1.1
46	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	32	1.4
47	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	32	1.8
48	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	32	1.8
49	AFG2_YEAST (P32794) Protein AFG2	31	2.4
50	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	31	2.4
51	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	31	3.2
52	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	31	3.2
53	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	31	3.2
54	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	31	3.2
55	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	30	4.1
56	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	30	4.1
57	CDCH_HALSA (Q9HPF0) Protein cdcH	30	4.1
58	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	30	4.1
59	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	30	4.1
60	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	30	5.4
61	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	30	5.4
62	ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondr...	30	5.4
63	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	30	5.4
64	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	30	5.4
65	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	30	5.4
66	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	30	7.0
67	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	30	7.0
68	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	30	7.0
69	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	30	7.0
70	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	30	7.0
71	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	30	7.0
72	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	30	7.0
73	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	29	9.2

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  155 bits (391), Expect = 1e-37
 Identities = 80/130 (61%), Positives = 87/130 (66%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D + R   FK+C RKSP+ KD+D  A AKYTQGF G DITEICQR+CKYAI         
Sbjct: 653  DEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIE 712

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   +P             I+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF
Sbjct: 713  KERKRAESPEAMEEDEEEIAE-IKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 771

Query: 217  GSEFRFPDQP 188
            GSEFRFPD P
Sbjct: 772  GSEFRFPDAP 781

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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  154 bits (389), Expect = 2e-37
 Identities = 83/127 (65%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D D R   FKAC RKSP+ KD+D +A AKYTQGF G DITEICQRACKYAI         
Sbjct: 652  DEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 711

Query: 397  XXXXXXXNPXXXXXXXXXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 221
                   NP              IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG
Sbjct: 712  NERRRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 771

Query: 220  FGSEFRF 200
            FGSEFRF
Sbjct: 772  FGSEFRF 778

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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  154 bits (389), Expect = 2e-37
 Identities = 82/126 (65%), Positives = 85/126 (67%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D D R   FKA  RKSP+ KD+D  A AKYTQGF G DITEICQRACKYAI         
Sbjct: 653  DEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIE 712

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EI+AAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF
Sbjct: 713  KEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 772

Query: 217  GSEFRF 200
            GSEFRF
Sbjct: 773  GSEFRF 778

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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  150 bits (378), Expect = 4e-36
 Identities = 79/129 (61%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D D R   FKAC RKSP+ K++D  A A++TQGF G DITEICQRACKYAI         
Sbjct: 653  DEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIE 712

Query: 397  XXXXXXXNPXXXXXXXXXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 221
                   NP              I+AAHFEESMK+ARRSVSDADIRKYQAFAQTLQQSRG
Sbjct: 713  RERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRG 772

Query: 220  FGSEFRFPD 194
            FGSEFRFP+
Sbjct: 773  FGSEFRFPE 781

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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  149 bits (377), Expect = 5e-36
 Identities = 81/128 (63%), Positives = 85/128 (66%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D D R   FKAC RKSPL KDID  A AK+TQGF G D+TEICQRACKYAI         
Sbjct: 653  DEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIE 712

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP             I+ AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF
Sbjct: 713  REKRRQENPDSMDEDVDEVPE-IKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 771

Query: 217  GSEFRFPD 194
            G+EFRF D
Sbjct: 772  GTEFRFAD 779

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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  120 bits (302), Expect = 2e-27
 Identities = 68/127 (53%), Positives = 75/127 (59%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RKSP+ KD+D    AK T GF G D+TEICQRACK AI         
Sbjct: 648  DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR 707

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGF
Sbjct: 708  RERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF 767

Query: 217  GSEFRFP 197
            GS FRFP
Sbjct: 768  GS-FRFP 773

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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  120 bits (302), Expect = 2e-27
 Identities = 68/127 (53%), Positives = 75/127 (59%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RKSP+ KD+D    AK T GF G D+TEICQRACK AI         
Sbjct: 648  DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR 707

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGF
Sbjct: 708  RERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF 767

Query: 217  GSEFRFP 197
            GS FRFP
Sbjct: 768  GS-FRFP 773

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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  120 bits (302), Expect = 2e-27
 Identities = 68/127 (53%), Positives = 75/127 (59%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RKSP+ KD+D    AK T GF G D+TEICQRACK AI         
Sbjct: 648  DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR 707

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGF
Sbjct: 708  RERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF 767

Query: 217  GSEFRFP 197
            GS FRFP
Sbjct: 768  GS-FRFP 773

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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  120 bits (302), Expect = 2e-27
 Identities = 68/127 (53%), Positives = 75/127 (59%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RKSP+ KD+D    AK T GF G D+TEICQRACK AI         
Sbjct: 648  DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR 707

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGF
Sbjct: 708  RERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGF 767

Query: 217  GSEFRFP 197
            GS FRFP
Sbjct: 768  GS-FRFP 773

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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  119 bits (297), Expect = 9e-27
 Identities = 68/127 (53%), Positives = 74/127 (58%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RKSP+ KD+D    AK T GF G D+TEICQRACK AI         
Sbjct: 649  DEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIR 708

Query: 397  XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF 218
                   NP            EIR  HFEE+M+ ARRSVSD DIRKY+ FAQTLQQSRGF
Sbjct: 709  RERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGF 768

Query: 217  GSEFRFP 197
            GS FRFP
Sbjct: 769  GS-FRFP 774

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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  113 bits (283), Expect = 4e-25
 Identities = 63/133 (47%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R   FKA  RK+PL  D+D +  AK T GF G D+TEICQRACK AI         
Sbjct: 654  DEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIR 713

Query: 397  XXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQ 230
                                 +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQ
Sbjct: 714  QEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQ 773

Query: 229  SRGFGSEFRFPDQ 191
            SRGFG+ F+FP +
Sbjct: 774  SRGFGNNFKFPGE 786

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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  113 bits (283), Expect = 4e-25
 Identities = 63/133 (47%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D   R    KA  RK+PL KD+D +  AK T GF G D+TEICQRACK AI         
Sbjct: 656  DEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIR 715

Query: 397  XXXXXXXNPXXXXXXXXXXXXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQ 230
                                 +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQ
Sbjct: 716  IEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQ 775

Query: 229  SRGFGSEFRFPDQ 191
            SRGFG+ F+FP +
Sbjct: 776  SRGFGNNFKFPGE 788

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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 49/142 (34%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D + R     A  RK+PL   ++ +A AK TQGF G D+  I QRA KYAI         
Sbjct: 659  DENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQ 718

Query: 397  XXXXXXXNPXXXXXXXXXXXXE------------IRAAHFEESMKYARRSVSDADIRKYQ 254
                                 +            I   HF E+MK A+RSVSDA++R+Y+
Sbjct: 719  HEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYE 778

Query: 253  AFAQTLQQSRGFGSEFRFPDQP 188
            A++Q ++ SRG  S F F D P
Sbjct: 779  AYSQQMKASRGQFSNFNFNDAP 800



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D   R    +   +   L  D+D  A A  T G+ G DI  +C  A    I
Sbjct: 383 DATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQI 433

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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D + R    +   R +P+ +D+D  A AK T GF G D+  + QRA K AI         
Sbjct: 668  DEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIK 727

Query: 397  XXXXXXXNPXXXXXXXXXXXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 221
                    P              ++  H EE+MK ARRSVSDA++R+Y+A+A  L  SRG
Sbjct: 728  RENETGEAPADDVVMDEDASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRG 787

Query: 220  F-GSEFRFPD 194
              G +F   D
Sbjct: 788  LTGFQFDSAD 797

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>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
            D+  R   FKA  + +PL +D+D    AK T+GF G DIT +CQ A   AI         
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNI 1163

Query: 397  XXXXXXXNPXXXXXXXXXXXX-------EIRAAHFEESMKYARRSVSDADIRKYQAFAQT 239
                                         +   HF+ + K AR S+   D+ KY+ F + 
Sbjct: 1164 RKKEQEEQRKKNKNSFKIDDTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEK 1223

Query: 238  L 236
            L
Sbjct: 1224 L 1224

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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
 Frame = -3

Query: 577  DVDXRXXXFKACXRKSPLXKDIDXSAXAKYT-QGFXGXDITEICQRACKYAIXXXXXXXX 401
            + D R    KA  RK P+   +D    AK   +GF G D+  + Q+A   A+        
Sbjct: 696  NADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV-------- 747

Query: 400  XXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRG 221
                    +              I+  HFE+++     SV+    R Y A +  LQ+S G
Sbjct: 748  --EEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVG 805

Query: 220  FGSE 209
              +E
Sbjct: 806  RNTE 809

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 29/108 (26%), Positives = 43/108 (39%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
           D   R   FK   R  PL  D++    A+ T+G+ G DI  +C+ A   AI         
Sbjct: 625 DKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGM- 683

Query: 397 XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                                +I   HFEE++K  R S++  D+ KY+
Sbjct: 684 ---------TREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDVEKYE 722



 Score = 40.0 bits (92), Expect = 0.005
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D + R    +   RK PL +D+D    A+ T GF G D+  +C+ A  +A+
Sbjct: 351 DKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHAL 401

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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 571 DXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           + R   FK   RK  L +D+D    A+ T+G  G DI  IC  A  +AI
Sbjct: 315 EGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAI 363

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           D+  R    K   RK PL KD+D    A+ T GF G D+  +   A  +A
Sbjct: 323 DIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFA 372

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>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 24/117 (20%), Positives = 46/117 (39%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
           D + R    K   +  PL  D+D +  A+ T+G+ G D+  +C+ A   A          
Sbjct: 637 DKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNA---------- 686

Query: 397 XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 227
                                 +   +F +++K  R SV +  I+ Y+  ++T+ +S
Sbjct: 687 -------------YRENPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKS 730

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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D + R   FK   R   L +D+D    AK T+G  G DI  IC  A   AI
Sbjct: 351 DEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAI 401

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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           ++D R    +   ++ PL  DID  + A+   G+ G DIT +C+ A   A+
Sbjct: 408 EIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAM 458

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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D   R   FK   R   L +D++    AK T+G+ G DI  +C+ A   A+
Sbjct: 622 DEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAV 672



 Score = 35.4 bits (80), Expect = 0.13
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D + R    +   R  PL +D+D    A  T GF G D+  +C+ A   A+
Sbjct: 348 DREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRAL 398

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R+ PL  DID +  A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R+ PL  DID +  A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R+ PL  DID +  A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R+ PL  DID +  A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R+ PL  DID +  A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   RK PL +D+D    A+ T GF G D+  +   A  +A
Sbjct: 323 DVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   +  PL +D+D    A+ T GF G D+  +   A   A
Sbjct: 358 DVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   +  PL +D+D    A+ T GF G D+  +   A   A
Sbjct: 358 DVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

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>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 24/104 (23%), Positives = 40/104 (38%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    +   R+  L  D+D ++ A+  +G+ G DIT +C+ A   A+             
Sbjct: 387 REELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIR 446

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                                  FE ++K   +SVS ADI +Y+
Sbjct: 447 NLSKEEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482

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>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D   R    +   R  P+  D+D    A+ T G+ G D+  + + A  YA+
Sbjct: 381 DTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYAL 431

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>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 26/104 (25%), Positives = 38/104 (36%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    K   R+  L  DI     A+ T+G+ G DIT IC+ A   A+             
Sbjct: 384 RAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAM--------RRRIN 435

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                             +     E ++K   +SVS AD+ KY+
Sbjct: 436 GLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R   L KD+D    A+ T GF G D+  +   A   A
Sbjct: 327 DVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLA 376

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>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 25/104 (24%), Positives = 38/104 (36%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    K   R+  L  DI     A+  +G+ G DIT +C+ A   A+             
Sbjct: 386 RAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAM--------RRRIN 437

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                             +    FE ++K   +SVS AD+ KY+
Sbjct: 438 GLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYE 481

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   RK  + +D+D    A+ T G+ G D+  +   A  +A
Sbjct: 68  DVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFA 117

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   RK  + +D+D    A+ T G+ G D+  +   A  +A
Sbjct: 322 DVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFA 371

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>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 23/104 (22%), Positives = 40/104 (38%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    +   R+  L  D++ ++ A+  +G+ G DIT +C+ A   A+             
Sbjct: 387 REELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIR 446

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                                  FE ++K   +SVS ADI +Y+
Sbjct: 447 NLSREEMHMPTT--------MEDFEMALKKVSKSVSAADIERYE 482

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>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 23/104 (22%), Positives = 40/104 (38%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    +   R+  L  D++ ++ A+  +G+ G DIT +C+ A   A+             
Sbjct: 387 REELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIR 446

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                                  FE ++K   +SVS ADI +Y+
Sbjct: 447 NLSREAMHMPTT--------MEDFEMALKKISKSVSAADIERYE 482

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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 21/108 (19%), Positives = 41/108 (37%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXX 398
           D + R        R   +  D++    A+ T+G+ G D+T +C+ A    +         
Sbjct: 414 DFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGM-------RR 466

Query: 397 XXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                  +              +    FEE+++  + SVS +DI K++
Sbjct: 467 KIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 574 VDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           ++ R    K    K  L +DID    AK T+G  G D+  I   A  +A+
Sbjct: 332 IEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAV 381

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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 538 RKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           RK+ +  D+D  A AK T+GF G D+  +   A   AI
Sbjct: 324 RKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAI 361

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>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 25/104 (24%), Positives = 37/104 (35%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXX 386
           R    K   R+  L  D+     A  T+G+ G DIT IC+ A   A+             
Sbjct: 384 RAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAM--------RRRIN 435

Query: 385 XXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                             +     E ++K   +SVS AD+ KY+
Sbjct: 436 GLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYE 479

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV+ R    K   R  PL  D++    A  T GF G D+  +   A   A
Sbjct: 337 DVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVA 386

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>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           D+D R    +     +P   +I+    A  T+GF G D+  +C+ A
Sbjct: 363 DIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTA 408

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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D   R   F    +K  +  +I+    ++ T+GF G DI  +C  A   AI
Sbjct: 306 DFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAI 356

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   +  PL  D+D    A  T G+ G D+  +   A   A
Sbjct: 365 DVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVA 414

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>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKD-IDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXX 401
           DV+ R    K C +K    +  +D    A  T+G+ G ++  +CQ A   AI        
Sbjct: 685 DVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAI-------- 736

Query: 400 XXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESMKYARRSVSDADIRKYQAFA 245
                                 ++   HFE++ K   R ++   +  Y+ FA
Sbjct: 737 ---------------MEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFA 773

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           DV  R    K   R   + KD+D    A+ T GF G D+  +   A
Sbjct: 421 DVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEA 466

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>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D   R    K   RK  L +D++    AK T+G  G ++  IC  A   AI
Sbjct: 342 DEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAI 392

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           D+  R    +   +K PL  ++D    A+ T GF G D+  +   A  +A
Sbjct: 323 DIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFA 372

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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 574 VDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           ++ R    K    K  L  DID    AK T+G  G D+  I   A  +A+
Sbjct: 332 IEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAV 381

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           DV  R    +   R   L KD+D    A+ T GF G D+  +   A
Sbjct: 401 DVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEA 446

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>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D++ R   FK   R     +DI     A+      G DI  +C  A  YAI
Sbjct: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 390

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>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           DV  R    +   R   L KD+D    A+ T GF G D+  +   A
Sbjct: 424 DVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEA 469

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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -3

Query: 565 RXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           R    K   R  PL  D++ S  A  T GF G DI  + + A   A+
Sbjct: 362 REEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRAL 408

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>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D++ R   FK   R     +DI     A+      G DI  +C  A  YAI
Sbjct: 339 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 389

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           DV  R    +   R   L KD+D    A+ T GF G D+  +   A
Sbjct: 433 DVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEA 478

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>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D++ R   FK   R     +DI     A+      G DI  +C  A  YAI
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 390

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>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D++ R   FK   R     +DI     A+      G DI  +C  A  YAI
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI 390

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>ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondrial precursor|
           (EC 1.18.1.2) (Adrenodoxin reductase) (AR) (Ferredoxin
           reductase) (Ferredoxin--NADP(+) reductase)
          Length = 492

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 372 PKQWRRMRWTRWLRSELPTSRS 307
           P+ WR   W+ W R+ LP SRS
Sbjct: 3   PRCWRWWPWSSWTRTRLPPSRS 24

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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 529 PLXK--DIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           P+ K  +ID  A  K + GF G D+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 529 PLXK--DIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           P+ K  +ID  A  K + GF G D+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 529 PLXK--DIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           P+ K  +ID  A  K + GF G D+  +C  A  +AI
Sbjct: 319 PITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRK----SPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           D+  R   FK   R     S L KD      A  T GF G D+  +C  A   A
Sbjct: 478 DIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIA 531

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>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 21/91 (23%), Positives = 33/91 (36%)
 Frame = -3

Query: 526 LXKDIDXSAXAKYTQGFXGXDITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXX 347
           L  D++    A+   G+ G DIT +C+ A   A+                          
Sbjct: 397 LADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTT- 455

Query: 346 XXXXEIRAAHFEESMKYARRSVSDADIRKYQ 254
                     FE ++K   +SVS +DI KY+
Sbjct: 456 -------MEDFEMALKKVSKSVSASDIEKYE 479

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           DV  R    +   R   L KD+D    A+ T G+ G D+  +   A
Sbjct: 424 DVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEA 469

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           DV  R    K   R  PL + ++  + A  T GF G D+  +   A   A
Sbjct: 332 DVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVA 381

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRK----SPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           D+  R   FK   R       L KD      A  T GF G DI+ +C  A   A
Sbjct: 345 DIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIA 398

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRK----SPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYA 428
           D+  R   FK   R     S L KD      A  T GF G D+  +C  A   A
Sbjct: 479 DIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIA 532

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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = -3

Query: 571 DXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRACKYAI 425
           D R    K       L +++D    A+ T G  G D+  IC  A  +AI
Sbjct: 325 DGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAI 373

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>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 577 DVDXRXXXFKACXRKSPLXKDIDXSAXAKYTQGFXGXDITEICQRA 440
           +V  R    K       +   ++ S  AK T GF G D+ E+C+ A
Sbjct: 265 NVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDA 310


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,951,427
Number of Sequences: 219361
Number of extensions: 722857
Number of successful extensions: 2111
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 2006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result