ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd22l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009240.1| Triticum aestivum clone wlk1.pk0007.f5:fis, full ... 492 e-136
2dbj|AK066161.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 3e-41
3ref|XM_475642.1| Oryza sativa (japonica cultivar-group), predic... 170 2e-39
4gb|BT018934.1| Zea mays clone Contig74.F mRNA sequence 165 1e-37
5gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7gb|AY110028.1| Zea mays CL302_1 mRNA sequence 96 9e-17
8ref|NM_118763.3| Arabidopsis thaliana EMB1027; ATP binding / arg... 56 8e-05
9emb|BX829023.1|CNS0A4H6 Arabidopsis thaliana Full-length cDNA Co... 56 8e-05
10ref|NM_105324.1| Arabidopsis thaliana ATP binding / arginine-tRN... 50 0.005
11gb|AF375433.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, co... 50 0.005
12gb|AC074025.1|AC074025 Arabidopsis thaliana chromosome 1 BAC F28... 50 0.005
13gb|AY093956.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, co... 48 0.020
14gb|DQ226705.1| Boechera divaricarpa isolate SLW-A-D02 mRNA sequence 46 0.078
15emb|Z98759.1|ATARGSG6 Arabidopsis thaliana gene encoding arginyl... 46 0.078
16gb|AC153694.1| Mus musculus BAC RP23-333I12 (Roswell Park Cance... 42 1.2
17gb|AC151368.3| Aotus nancymaae clone CH258-251O19, complete sequ... 40 4.8
18gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, co... 40 4.8
19gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, co... 40 4.8
20emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chr... 40 4.8
21gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosom... 40 4.8
22ref|XM_544336.2| PREDICTED: Canis familiaris similar to uracil-D... 40 4.8
23emb|Z98760.1|ATARGSG7 Arabidopsis thaliana gene encoding arginyl... 40 4.8
24emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 4.8
25emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on ch... 40 4.8
26emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 40 4.8
27emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, B... 40 4.8
28emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 4.8
29emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 i... 40 4.8
30emb|BX663604.9| Zebrafish DNA sequence from clone CH211-222K9 in... 40 4.8
31gb|AC182540.3| Ateles geoffroyi clone UC1-338I2, complete sequence 40 4.8
32emb|BX823434.1|CNS0A5FW Arabidopsis thaliana Full-length cDNA Co... 40 4.8
33gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, compl... 40 4.8
34emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chr... 40 4.8 
>gb|BT009240.1| Triticum aestivum clone wlk1.pk0007.f5:fis, full insert mRNA
           sequence
          Length = 1041

 Score =  492 bits (248), Expect = e-136
 Identities = 295/312 (94%)
 Strand = Plus / Minus

                                                                       
Query: 41  taggttacaaggacgaaaactgtaaccatggaaacatgcttgtgtggaaacaaatgtatg 100
           |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 814 taggttacaaggacgaaaactgtaaccatggagacgggcttgtgtggaaacaaatgtatg 755

                                                                       
Query: 101 atgtaaaaggtcagacactggccaatcacagcttgtaaactggtgtgatcccaagcagct 160
           |||| || | |||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 754 atgtgaaggatcagacactggccaatcacagcatgtaaaccggtgtgatcccaagcagct 695

                                                                       
Query: 161 ggaagcattgtcgcatgacgaccgccgtcgcttcgcanagcagtagccggcttggctcct 220
           ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||
Sbjct: 694 ggaagcattgtcgcatgacgacccccgtcgcttcgcaaagcagcagccggcttggctcct 635

                                                                       
Query: 221 ccggtgacccaacaacctggcagtttgtgtagaacctcgtgaacatttcagataagttgt 280
           ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 634 ccggtgatccaacaacctggcagtttgtgtagaaccttgtgaacatttcggataagttgt 575

                                                                       
Query: 281 ataggtattcacacagaacactgngaaggagattggtgcatgcctcttcaacaatctctg 340
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 574 ataggtattcacacagaacactgggaaggagattggtgcatgcctcttcaacaatctctg 515

                       
Query: 341 cntaacngataa 352
           | |||| |||||
Sbjct: 514 cataacggataa 503



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 21  agtatgttagtggtgccaacta 42
           ||||||||||||||||||||||
Sbjct: 920 agtatgttagtggtgccaacta 899
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>dbj|AK066161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052F22, full
            insert sequence
          Length = 2136

 Score =  176 bits (89), Expect = 3e-41
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 123  caatcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgac 182
            |||||||||||||||||||||||| || || |||||||  |||||||||||||| |||||
Sbjct: 1997 caatcacagcttgtaaactggtgtaattccgagcagctcaaagcattgtcgcatcacgac 1938

                                                                        
Query: 183  cgccgtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctggca 242
            ||||||||||| ||| ||||| || ||||||| |||||| || || ||||| ||||||||
Sbjct: 1937 cgccgtcgcttggcagagcagcagtcggcttgtctcctcgggcgatccaaccacctggca 1878

                                                                        
Query: 243  gtttgtgtagaacctcgtgaacatttcagataagttgtataggtattcacacagaacact 302
            ||| ||||| || || |||||||||||||| | |||||| ||||| || ||||| ||| |
Sbjct: 1877 gttggtgtaaaatcttgtgaacatttcagaaaggttgtacaggtactcgcacaggacatt 1818

                                                   
Query: 303  gngaaggagattggtgcatgcctcttcaacaatctctgc 341
              |||| || |||||||| |||||||| |||| ||||||
Sbjct: 1817 cggaagtaggttggtgcacgcctcttccacaacctctgc 1779
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>ref|XM_475642.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1821

 Score =  170 bits (86), Expect = 2e-39
 Identities = 183/216 (84%)
 Strand = Plus / Minus

                                                                        
Query: 126  tcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccgc 185
            ||||||||||||||||||||| || || |||||||  |||||||||||||| ||||||||
Sbjct: 1821 tcacagcttgtaaactggtgtaattccgagcagctcaaagcattgtcgcatcacgaccgc 1762

                                                                        
Query: 186  cgtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctggcagtt 245
            |||||||| ||| ||||| || ||||||| |||||| || || ||||| |||||||||||
Sbjct: 1761 cgtcgcttggcagagcagcagtcggcttgtctcctcgggcgatccaaccacctggcagtt 1702

                                                                        
Query: 246  tgtgtagaacctcgtgaacatttcagataagttgtataggtattcacacagaacactgng 305
             ||||| || || |||||||||||||| | |||||| ||||| || ||||| ||| |  |
Sbjct: 1701 ggtgtaaaatcttgtgaacatttcagaaaggttgtacaggtactcgcacaggacattcgg 1642

                                                
Query: 306  aaggagattggtgcatgcctcttcaacaatctctgc 341
            ||| || |||||||| |||||||| |||| ||||||
Sbjct: 1641 aagtaggttggtgcacgcctcttccacaacctctgc 1606
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>gb|BT018934.1| Zea mays clone Contig74.F mRNA sequence
          Length = 1069

 Score =  165 bits (83), Expect = 1e-37
 Identities = 186/221 (84%)
 Strand = Plus / Plus

                                                                       
Query: 121 gccaatcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacg 180
           ||||||||||||||||| ||||| |||||||| ||||| | |||||| ||||||||||| 
Sbjct: 189 gccaatcacagcttgtatactggcgtgatcccgagcaggttgaagcactgtcgcatgaca 248

                                                                       
Query: 181 accgccgtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctgg 240
           || || ||||| | ||| ||||  | |||||| | ||||||||| |||||||| ||||||
Sbjct: 249 acagcagtcgcctggcaaagcaacaaccggctcgtctcctccggcgacccaaccacctgg 308

                                                                       
Query: 241 cagtttgtgtagaacctcgtgaacatttcagataagttgtataggtattcacacagaaca 300
           ||||| || |||||  | ||||||||||||||||  ||||| | ||||||||||| ||||
Sbjct: 309 cagttggtatagaattttgtgaacatttcagatagattgtacaagtattcacacacaaca 368

                                                    
Query: 301 ctgngaaggagattggtgcatgcctcttcaacaatctctgc 341
            |  |||| ||||| ||||||||||||||||||| ||||||
Sbjct: 369 tttggaagtagattcgtgcatgcctcttcaacaacctctgc 409
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  115 bits (58), Expect = 1e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 123   caatcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgac 182
             |||||||||||||||||||||||| || || |||||||  |||||||||||||| |||||
Sbjct: 59264 caatcacagcttgtaaactggtgtaattccgagcagctcaaagcattgtcgcatcacgac 59205

                                                                      
Query: 183   cgccgtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctg 239
             ||||||||||| ||| ||||| || ||||||| |||||| || || ||||| |||||
Sbjct: 59204 cgccgtcgcttggcagagcagcagtcggcttgtctcctcgggcgatccaaccacctg 59148



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                         
Query: 235   acctggcagtttgtgtagaacctcgtgaacatttcagataagttgtataggtattcacac 294
             ||||||||||| ||||| || || |||||||||||||| | |||||| ||||| || |||
Sbjct: 58967 acctggcagttggtgtaaaatcttgtgaacatttcagaaaggttgtacaggtactcgcac 58908

                                                     
Query: 295   agaacactgngaaggagattggtgcatgcctcttcaacaa 334
             || ||| |  |||| || |||||||| |||||||| ||||
Sbjct: 58907 aggacattcggaagtaggttggtgcacgcctcttccacaa 58868
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  115 bits (58), Expect = 1e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                           
Query: 123     caatcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgac 182
               |||||||||||||||||||||||| || || |||||||  |||||||||||||| |||||
Sbjct: 3636917 caatcacagcttgtaaactggtgtaattccgagcagctcaaagcattgtcgcatcacgac 3636858

                                                                        
Query: 183     cgccgtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctg 239
               ||||||||||| ||| ||||| || ||||||| |||||| || || ||||| |||||
Sbjct: 3636857 cgccgtcgcttggcagagcagcagtcggcttgtctcctcgggcgatccaaccacctg 3636801



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                           
Query: 235     acctggcagtttgtgtagaacctcgtgaacatttcagataagttgtataggtattcacac 294
               ||||||||||| ||||| || || |||||||||||||| | |||||| ||||| || |||
Sbjct: 3636620 acctggcagttggtgtaaaatcttgtgaacatttcagaaaggttgtacaggtactcgcac 3636561

                                                       
Query: 295     agaacactgngaaggagattggtgcatgcctcttcaacaa 334
               || ||| |  |||| || |||||||| |||||||| ||||
Sbjct: 3636560 aggacattcggaagtaggttggtgcacgcctcttccacaa 3636521
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>gb|AY110028.1| Zea mays CL302_1 mRNA sequence
          Length = 1651

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 121/146 (82%)
 Strand = Plus / Minus

                                                                       
Query: 187 gtcgcttcgcanagcagtagccggcttggctcctccggtgacccaacaacctggcagttt 246
           ||||||| ||| ||||  || ||||| | ||||||||||||||| || ||||| ||||| 
Sbjct: 914 gtcgcttggcaaagcaacagtcggctcgtctcctccggtgacccgaccacctgacagttg 855

                                                                       
Query: 247 gtgtagaacctcgtgaacatttcagataagttgtataggtattcacacagaacactgnga 306
           || |||||  | ||||||||||||||||  ||||| | ||||||||||| |||| |  ||
Sbjct: 854 gtatagaattttgtgaacatttcagatagattgtacaagtattcacacacaacatttgga 795

                                     
Query: 307 aggagattggtgcatgcctcttcaac 332
           || ||||| |||||||||||||||||
Sbjct: 794 agcagattcgtgcatgcctcttcaac 769



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 125 atcacagcttgtaaactggtgtgatccc 152
           ||||||||||||| ||||| ||||||||
Sbjct: 976 atcacagcttgtagactggggtgatccc 949
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>ref|NM_118763.3| Arabidopsis thaliana EMB1027; ATP binding / arginine-tRNA ligase/
            tRNA ligase AT4G26300 (EMB1027) mRNA, complete cds
          Length = 2352

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 135/171 (78%)
 Strand = Plus / Minus

                                                                        
Query: 132  cttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccgccgtcgc 191
            ||||||||| || ||||| ||||| || ||||||||||  |||||||| |  ||||| ||
Sbjct: 1923 cttgtaaaccggagtgattccaagaaggtggaagcatttccgcatgactatggccgttgc 1864

                                                                        
Query: 192  ttcgcanagcagtagccggcttggctcctccggtgacccaacaacctggcagtttgtgta 251
            ||| || || || || ||||||| |||||| ||||| |||   ||||| || || | |||
Sbjct: 1863 ttcacaaagtaggagacggcttgtctcctctggtgaaccattgacctgacaattggagta 1804

                                                               
Query: 252  gaacctcgtgaacatttcagataagttgtataggtattcacacagaacact 302
            ||| || || ||   ||||||||| ||||| ||||| || |||||||||||
Sbjct: 1803 gaatctggtaaagtgttcagataaattgtagaggtactcgcacagaacact 1753
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>emb|BX829023.1|CNS0A4H6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL60ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 565

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 135/171 (78%)
 Strand = Plus / Minus

                                                                       
Query: 132 cttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccgccgtcgc 191
           ||||||||| || ||||| ||||| || ||||||||||  |||||||| |  ||||| ||
Sbjct: 365 cttgtaaaccggagtgattccaagaaggtggaagcatttccgcatgactatggccgttgc 306

                                                                       
Query: 192 ttcgcanagcagtagccggcttggctcctccggtgacccaacaacctggcagtttgtgta 251
           ||| || || || || ||||||| |||||| ||||| |||   ||||| || || | |||
Sbjct: 305 ttcacaaagtaggagacggcttgtctcctctggtgaaccattgacctgacaattggagta 246

                                                              
Query: 252 gaacctcgtgaacatttcagataagttgtataggtattcacacagaacact 302
           ||| || || ||   ||||||||| ||||| ||||| || |||||||||||
Sbjct: 245 gaatctggtaaagtgttcagataaattgtagaggtactcgcacagaacact 195
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>ref|NM_105324.1| Arabidopsis thaliana ATP binding / arginine-tRNA ligase/ tRNA ligase
            AT1G66530 mRNA, complete cds
          Length = 1991

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 125  atcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccg 184
            |||| ||||||||||| || ||||| ||||| || ||||||||||  |||||||| |  |
Sbjct: 1839 atcaaagcttgtaaacaggggtgattccaagaaggtggaagcatttccgcatgactatag 1780

                         
Query: 185  ccgtcgcttcgca 197
            |||| ||||||||
Sbjct: 1779 ccgttgcttcgca 1767
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>gb|AF375433.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, complete cds
          Length = 1991

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 125  atcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccg 184
            |||| ||||||||||| || ||||| ||||| || ||||||||||  |||||||| |  |
Sbjct: 1839 atcaaagcttgtaaacaggggtgattccaagaaggtggaagcatttccgcatgactatag 1780

                         
Query: 185  ccgtcgcttcgca 197
            |||| ||||||||
Sbjct: 1779 ccgttgcttcgca 1767
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>gb|AC074025.1|AC074025 Arabidopsis thaliana chromosome 1 BAC F28G11 genomic sequence, complete
             sequence
          Length = 63773

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 125   atcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccg 184
             |||| ||||||||||| || ||||| ||||| || ||||||||||  |||||||| |  |
Sbjct: 16952 atcaaagcttgtaaacaggggtgattccaagaaggtggaagcatttccgcatgactatag 16893

                          
Query: 185   ccgtcgcttcgca 197
             |||| ||||||||
Sbjct: 16892 ccgttgcttcgca 16880
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>gb|AY093956.1| Arabidopsis thaliana At1g66530/F28G11_14 mRNA, complete cds
          Length = 1773

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 130  agcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccgccgtc 189
            ||||||||||| || ||||| ||||| || ||||||||||  |||||||| |  ||||| 
Sbjct: 1769 agcttgtaaacaggggtgattccaagaaggtggaagcatttccgcatgactatagccgtt 1710

                    
Query: 190  gcttcgca 197
            ||||||||
Sbjct: 1709 gcttcgca 1702
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>gb|DQ226705.1| Boechera divaricarpa isolate SLW-A-D02 mRNA sequence
          Length = 407

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 132 cttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgacgaccgccgtcgc 191
           |||||||||||| ||||| ||||| || | ||||||||  |||||||| |  ||||||||
Sbjct: 155 cttgtaaactggggtgattccaagaaggtagaagcatttccgcatgactatggccgtcgc 96

              
Query: 192 ttc 194
           |||
Sbjct: 95  ttc 93
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>emb|Z98759.1|ATARGSG6 Arabidopsis thaliana gene encoding arginyl-tRNA synthetase, clone G6
          Length = 4431

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 125  atcacagcttgtaaactggtgtgatcccaagcagctggaagcattgtcgcatgac 179
            |||| ||||||||||| || ||||| ||||| || ||||||||||  ||||||||
Sbjct: 4018 atcaaagcttgtaaacaggggtgattccaagaaggtggaagcatttccgcatgac 3964
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>gb|AC153694.1| Mus musculus  BAC RP23-333I12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208414

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    cactggccaatcacagcttgt 136
              |||||||||||||||||||||
Sbjct: 114892 cactggccaatcacagcttgt 114872
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>gb|AC151368.3| Aotus nancymaae clone CH258-251O19, complete sequence
          Length = 189563

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   atgtaaaaggtcagacactggcca 124
             ||||||||||||||||| ||||||
Sbjct: 55263 atgtaaaaggtcagacattggcca 55240
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>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence
          Length = 218995

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tgaacatttcagataagttg 279
              ||||||||||||||||||||
Sbjct: 170049 tgaacatttcagataagttg 170030
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>gb|AC107230.8| Mus musculus chromosome 18, clone RP23-238L23, complete sequence
          Length = 192286

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aaactgtaaccatggaaaca 76
             ||||||||||||||||||||
Sbjct: 42280 aaactgtaaccatggaaaca 42261
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>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete
              sequence
          Length = 202415

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tgaacatttcagataagttg 279
              ||||||||||||||||||||
Sbjct: 132950 tgaacatttcagataagttg 132931
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>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete
             sequence
          Length = 177414

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    tgtgtggaaacaaatgtatg 100
             ||||||||||||||||||||
Sbjct: 19827 tgtgtggaaacaaatgtatg 19808
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>ref|XM_544336.2| PREDICTED: Canis familiaris similar to uracil-DNA glycosylase 2
           isoform a (LOC487208), mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 tgtgatcccaagcagctggaagca 167
           ||||| ||||||||||||||||||
Sbjct: 549 tgtgaccccaagcagctggaagca 526
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>emb|Z98760.1|ATARGSG7 Arabidopsis thaliana gene encoding arginyl-tRNA synthetase, clone G7
          Length = 5975

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 267  ttcagataagttgtataggtattcacacagaacact 302
            ||||||||| ||||| ||||| || |||||||||||
Sbjct: 5010 ttcagataaattgtagaggtactcgcacagaacact 4975
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    cgcatgacgaccgccgtcgc 191
              ||||||||||||||||||||
Sbjct: 181070 cgcatgacgaccgccgtcgc 181051
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>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the
              5' end of the gene for a novel protein similar to human
              KIBRA, a pseudogene similar to part of actin, the Odz2 gene
              for odd Oz/ten-m homolog 2 (Drosophila) and two CpG
              islands, complete sequence
          Length = 186736

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    cagacactggccaatcacag 131
              ||||||||||||||||||||
Sbjct: 101348 cagacactggccaatcacag 101367
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>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 267  ttcagataagttgtataggtattcacacagaacact 302
            ||||||||| ||||| ||||| || |||||||||||
Sbjct: 5832 ttcagataaattgtagaggtactcgcacagaacact 5867
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>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone  (ESSA project)
          Length = 89904

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 267   ttcagataagttgtataggtattcacacagaacact 302
             ||||||||| ||||| ||||| || |||||||||||
Sbjct: 52764 ttcagataaattgtagaggtactcgcacagaacact 52799
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
             complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaactgtaaccatggaaaca 76
             ||||||||||||||||||||
Sbjct: 85694 aaactgtaaccatggaaaca 85713
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>emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 in linkage group 8,
             complete sequence
          Length = 190936

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    atgatgtaaaaggtcagaca 117
             ||||||||||||||||||||
Sbjct: 31048 atgatgtaaaaggtcagaca 31067
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>emb|BX663604.9| Zebrafish DNA sequence from clone CH211-222K9 in linkage group 7,
             complete sequence
          Length = 161194

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    tggaaacaaatgtatgatgtaaaa 108
             |||||||||||| |||||||||||
Sbjct: 14380 tggaaacaaatggatgatgtaaaa 14403
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>gb|AC182540.3| Ateles geoffroyi clone UC1-338I2, complete sequence
          Length = 178244

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    atgtaaaaggtcagacactggcca 124
              ||||||||||||||||| ||||||
Sbjct: 148694 atgtaaaaggtcagacattggcca 148671
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>emb|BX823434.1|CNS0A5FW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS39ZE01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 267  ttcagataagttgtataggtattcacacagaacact 302
            ||||||||| ||||| ||||| || |||||||||||
Sbjct: 1067 ttcagataaattgtagaggtactcgcacagaacact 1102
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>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence
          Length = 240321

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tgtgtggaaacaaatgtatg 100
              ||||||||||||||||||||
Sbjct: 210343 tgtgtggaaacaaatgtatg 210324
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>emb|AL731682.20| Mouse DNA sequence from clone RP23-123F7 on chromosome 2, complete
              sequence
          Length = 201290

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cactggccaatcacagcttg 135
              ||||||||||||||||||||
Sbjct: 173309 cactggccaatcacagcttg 173328


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,631,544
Number of Sequences: 3902068
Number of extensions: 2631544
Number of successful extensions: 55733
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55669
Number of HSP's gapped (non-prelim): 64
length of query: 361
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 339
effective length of database: 17,147,199,772
effective search space: 5812900722708
effective search space used: 5812900722708
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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