Clone Name	rbasd23a14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	347	8e-93
2	ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA	291	4e-76
3	ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA	291	4e-76
4	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	291	4e-76
5	dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D...	291	4e-76
6	dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D...	291	4e-76
7	ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA	283	1e-73
8	ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group...	283	1e-73
9	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	283	1e-73
10	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	283	1e-73
11	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	283	1e-73
12	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	283	1e-73
13	gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome...	283	1e-73
14	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	283	1e-73
15	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	283	1e-73
16	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	283	1e-73
17	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
18	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
19	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
20	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
21	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
22	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
23	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
24	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	283	1e-73
25	dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clon...	283	1e-73
26	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	283	1e-73
27	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	283	1e-73
28	emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb...	283	1e-73
29	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	283	1e-73
30	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	276	2e-71
31	dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D...	276	2e-71
32	dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D...	276	2e-71
33	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	268	6e-69
34	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	262	4e-67
35	emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal prot...	262	4e-67
36	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	262	4e-67
37	ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA	260	1e-66
38	gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom...	260	1e-66
39	gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome...	260	1e-66
40	gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome...	260	1e-66
41	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	260	1e-66
42	emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0...	260	1e-66
43	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	260	1e-66
44	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	260	1e-66
45	dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic D...	260	1e-66
46	dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D...	260	1e-66
47	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	254	9e-65
48	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	254	9e-65
49	gb|DQ069533.1| Typha latifolia ribosomal protein S8 (rps8) gene,...	157	2e-35
50	gb|DQ069534.1| Yucca schidigera ribosomal protein S8 (rps8) gene...	137	1e-29
51	gb|AY582139.1| Panax ginseng chloroplast, complete genome	131	9e-28
52	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	129	4e-27
53	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	123	2e-25
54	emb|X03496.1|CHSOINFA Spinach plastid genes infA, rps 11 and rpo...	117	1e-23
55	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	117	1e-23
56	gb|AF206521.1|AF206521 Spinacia oleracea ribosomal protein S8 (r...	117	1e-23
57	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	115	5e-23
58	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	111	8e-22
59	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	107	1e-20
60	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	107	1e-20
61	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	107	1e-20
62	gb|DQ069532.1| Ranunculus macranthus ribosomal protein S8 (rps8)...	105	5e-20
63	gb|AF347627.1|AF347627 Glycine max ribosomal protein S8 (rps8) g...	105	5e-20
64	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	105	5e-20
65	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	105	5e-20
66	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	103	2e-19
67	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	101	8e-19
68	gb|DQ069529.1| Acorus americanus ribosomal protein S8 (rps8) gen...	100	3e-18
69	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	100	3e-18
70	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	100	3e-18
71	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	100	3e-18
72	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	100	3e-18
73	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	100	3e-18
74	gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete s...	98	1e-17
75	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	98	1e-17
76	gb|AY016336.1| Phragmites australis rpl36-rps8 intergenic spacer...	96	5e-17
77	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	96	5e-17
78	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	96	5e-17
79	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	96	5e-17
80	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	96	5e-17
81	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	90	3e-15
82	gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial ...	90	3e-15
83	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	90	3e-15
84	dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone...	90	3e-15
85	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	88	1e-14
86	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	88	1e-14
87	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	88	1e-14
88	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	88	1e-14
89	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	88	1e-14
90	gb|DQ069531.1| Nuphar advena ribosomal protein S8 (rps8) gene, p...	86	5e-14
91	gb|DQ108521.1| Corchorus olitorius SSR marker J-122-M13F genomic...	84	2e-13
92	emb|AJ001024.1|CLPAPETBD Picea abies chloroplast DNA petB and pe...	80	3e-12
93	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	80	3e-12
94	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	80	3e-12
95	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	76	5e-11
96	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	68	1e-08
97	gb|DQ069530.1| Ginkgo biloba ribosomal protein S8 (rps8) gene, p...	68	1e-08
98	gb|DQ269011.1| Dasypyrum breviaristatum InfA gene, complete cds;...	64	2e-07
99	gb|DQ269010.1| Haynaldia villosa InfA gene, complete cds; chloro...	64	2e-07
100	gb|DQ268512.1| Thinopyrum intermedium subsp. intermedium InfA ge...	64	2e-07
101	gb|DQ268510.1| Thinopyrum intermedium InfA gene, complete cds; c...	64	2e-07
102	gb|DQ268509.1| Thinopyrum bessarabicum InfA gene, complete cds; ...	64	2e-07
103	gb|DQ257630.1| Secale sylvestre InfA gene, complete cds; chlorop...	64	2e-07
104	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	62	7e-07
105	gb|DQ269013.1| Lophopyrum elongatum InfA gene, complete cds; chl...	62	7e-07
106	gb|DQ269012.1| Thinopyrum intermedium InfA gene, complete cds; c...	62	7e-07
107	gb|DQ268508.1| Secale strictum subsp. africanum InfA gene, compl...	62	7e-07
108	gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete ...	60	3e-06
109	dbj|AB087468.1| Anthoceros formosae chloroplast rpl36, infA, rps...	56	4e-05
110	gb|DQ289432.1| Pseudoroegneria spicata InfA gene, complete cds; ...	54	2e-04
111	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	52	7e-04
112	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	48	0.011
113	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	48	0.011
114	gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's ...	46	0.042
115	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	46	0.042
116	gb|DQ268511.1| Psathyrostachys juncea InfA gene, complete cds; c...	46	0.042
117	gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome...	44	0.16
118	gb|AC150432.2| Branchiostoma floridae clone CH302-9D15, complete...	42	0.65
119	gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co...	42	0.65
120	gb|AC131921.9| Mus musculus chromosome 12, clone RP24-231P11, co...	40	2.6
121	gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome...	40	2.6
122	gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, compl...	40	2.6
123	emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4,...	40	2.6

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  347 bits (175), Expect = 8e-93
 Identities = 197/202 (97%), Gaps = 2/202 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
             ||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 76426 ttttattttaaaaatagg-aagggcgagatag-aattcgagcactataggcggggcgatt 76483

                                                                         
Query: 61    accatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtca 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76484 accatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtca 76543

                                                                         
Query: 121   ttatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattc 180
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76544 ttattcctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattc 76603

                                   
Query: 181   cttgatagttggtataaattcg 202
             ||||||||||||||||||||||
Sbjct: 76604 cttgatagttggtataaattcg 76625

---

>ref|XM_479424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  291 bits (147), Expect = 4e-76
 Identities = 156/159 (98%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1968

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1967 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1908

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1907 caaaaccttaggaattccttgatagttggtataaattcg 1869

---

>ref|XM_479423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2154

 Score =  291 bits (147), Expect = 4e-76
 Identities = 156/159 (98%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1968

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1967 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1908

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| ||||||||||||||||||||||||||||||||
Sbjct: 1907 caaaaccttaggaattccttgatagttggtataaattcg 1869

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  291 bits (147), Expect = 4e-76
 Identities = 156/159 (98%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27922179 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 27922238

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 27922239 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 27922298

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| ||||||||||||||||||||||||||||||||
Sbjct: 27922299 caaaaccttaggaattccttgatagttggtataaattcg 27922337

---

>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score =  291 bits (147), Expect = 4e-76
 Identities = 156/159 (98%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85537 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 85596

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 85597 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 85656

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| ||||||||||||||||||||||||||||||||
Sbjct: 85657 caaaaccttaggaattccttgatagttggtataaattcg 85695

---

>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score =  291 bits (147), Expect = 4e-76
 Identities = 156/159 (98%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 11572

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 11573 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 11632

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| ||||||||||||||||||||||||||||||||
Sbjct: 11633 caaaaccttaggaattccttgatagttggtataaattcg 11671

---

>ref|XM_481019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1970

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1969 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1910

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 1909 caaaaccttaggaattccttgatagttggcataaattcg 1871

---

>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24
            mRNA
          Length = 2157

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1970

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1969 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1910

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 1909 caaaaccttaggaattccttgatagttggcataaattcg 1871

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76696 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 76755

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 76756 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 76815

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 76816 caaaaccttaggaattccttgatagttggcataaattcg 76854

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76696 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 76755

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 76756 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 76815

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 76816 caaaaccttaggaattccttgatagttggcataaattcg 76854

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76637 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 76696

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 76697 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 76756

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 76757 caaaaccttaggaattccttgatagttggcataaattcg 76795

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52707 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 52766

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 52767 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 52826

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 52827 caaaaccttaggaattccttgatagttggcataaattcg 52865

---

>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07,
              complete sequence
          Length = 136858

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                          
Query: 44     ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125535 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 125594

                                                                          
Query: 104    agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 125595 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 125654

                                                     
Query: 164    caaaactttaggaattccttgatagttggtataaattcg 202
              |||||| |||||||||||||||||||||| |||||||||
Sbjct: 125655 caaaaccttaggaattccttgatagttggcataaattcg 125693

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
             complete sequence
          Length = 145980

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74097 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 74038

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 74037 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 73978

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 73977 caaaaccttaggaattccttgatagttggcataaattcg 73939

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74884 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 74943

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 74944 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 75003

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 75004 caaaaccttaggaattccttgatagttggcataaattcg 75042

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8948 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 9007

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 9008 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 9067

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 9068 caaaaccttaggaattccttgatagttggcataaattcg 9106

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                           
Query: 44      ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9193024 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 9192965

                                                                           
Query: 104     agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 9192964 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 9192905

                                                      
Query: 164     caaaactttaggaattccttgatagttggtataaattcg 202
               |||||| |||||||||||||||||||||| |||||||||
Sbjct: 9192904 caaaaccttaggaattccttgatagttggcataaattcg 9192866



 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                           
Query: 44      ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9116071 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 9116012

                                                                           
Query: 104     agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 9116011 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 9115952

                                                      
Query: 164     caaaactttaggaattccttgatagttggtataaattcg 202
               |||||| |||||||||||||||||||||| |||||||||
Sbjct: 9115951 caaaaccttaggaattccttgatagttggcataaattcg 9115913



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 74      taagacttctcccccaattctgtttagt 101
               ||||| |||||| |||||||||||||||
Sbjct: 2244337 taagaattctcctccaattctgtttagt 2244310

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                           
Query: 44      ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656146 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 5656205

                                                                           
Query: 104     agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 5656206 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 5656265

                                                      
Query: 164     caaaactttaggaattccttgatagttggtataaattcg 202
               |||||| |||||||||||||||||||||| |||||||||
Sbjct: 5656266 caaaaccttaggaattccttgatagttggcataaattcg 5656304

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10368492 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 10368551

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 10368552 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 10368611

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 10368612 caaaaccttaggaattccttgatagttggcataaattcg 10368650

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                           
Query: 44      ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9260366 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 9260307

                                                                           
Query: 104     agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 9260306 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 9260247

                                                      
Query: 164     caaaactttaggaattccttgatagttggtataaattcg 202
               |||||| |||||||||||||||||||||| |||||||||
Sbjct: 9260246 caaaaccttaggaattccttgatagttggcataaattcg 9260208

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12755248 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 12755307

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 12755308 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 12755367

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 12755368 caaaaccttaggaattccttgatagttggcataaattcg 12755406



 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                            
Query: 43       actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
                |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 19546334 actataggtggggcgattaccatatataacataagacttctcctccaattttgtttagtc 19546275

                                                                            
Query: 103      gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
                |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 19546274 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccag 19546215

                                                       
Query: 163      ccaaaactttaggaattccttgatagttggtataaattc 201
                ||||||| |||||||||||||||||||||| ||||||||
Sbjct: 19546214 ccaaaaccttaggaattccttgatagttggcataaattc 19546176



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 91/112 (81%), Gaps = 4/112 (3%)
 Strand = Plus / Plus

                                                                           
Query: 71      acataagacttctcccccaattctgtttagtcgagcttctcgatctgtcattatc-cctc 129
               |||||||||||||   ||||||| || || || |||  ||||||||||||||||| ||||
Sbjct: 7019006 acataagacttct---ccaattcagtctaatctagcagctcgatctgtcattatctcctc 7019062

                                                                   
Query: 130     gagaagtagaaagaatagcaattcccattccacccaaaactttaggaattcc 181
                |||| |||| |||||| ||| | | |||||  ||||||| || ||||||||
Sbjct: 7019063 aagaactagagagaatatcaacttcaattccgtccaaaaccttgggaattcc 7019114

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33496462 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 33496521

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 33496522 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 33496581

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 33496582 caaaaccttaggaattccttgatagttggcataaattcg 33496620

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41659 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 41718

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 41719 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 41778

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 41779 caaaaccttaggaattccttgatagttggcataaattcg 41817

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71579 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 71520

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 71519 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 71460

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 71459 caaaaccttaggaattccttgatagttggcataaattcg 71421

---

>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full
            insert sequence
          Length = 2166

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1978

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1977 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1918

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 1917 caaaaccttaggaattccttgatagttggcataaattcg 1879

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10374531 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 10374590

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 10374591 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 10374650

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 10374651 caaaaccttaggaattccttgatagttggcataaattcg 10374689

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                           
Query: 44      ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5656139 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 5656198

                                                                           
Query: 104     agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
               ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 5656199 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 5656258

                                                      
Query: 164     caaaactttaggaattccttgatagttggtataaattcg 202
               |||||| |||||||||||||||||||||| |||||||||
Sbjct: 5656259 caaaaccttaggaattccttgatagttggcataaattcg 5656297

---

>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10669 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 10728

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 10729 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 10788

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 10789 caaaaccttaggaattccttgatagttggcataaattcg 10827

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  283 bits (143), Expect = 1e-73
 Identities = 155/159 (97%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76639 ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 76698

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 76699 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 76758

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 76759 caaaaccttaggaattccttgatagttggcataaattcg 76797



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ctataggcggggcgattacc 63
             ||||||||||||||||||||
Sbjct: 76618 ctataggcggggcgattacc 76637

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  276 bits (139), Expect = 2e-71
 Identities = 154/159 (96%)
 Strand = Plus / Minus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 23182406 ctataggcggggcgattaccatatataacataaaacttctcccccaattctgtttagtcg 23182347

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 23182346 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 23182287

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 23182286 caaaaccttaggaattccttgatagttggcataaattcg 23182248

---

>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0417D05
          Length = 165752

 Score =  276 bits (139), Expect = 2e-71
 Identities = 154/159 (96%)
 Strand = Plus / Minus

                                                                          
Query: 44     ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
              ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 133054 ctataggcggggcgattaccatatataacataaaacttctcccccaattctgtttagtcg 132995

                                                                          
Query: 104    agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 132994 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 132935

                                                     
Query: 164    caaaactttaggaattccttgatagttggtataaattcg 202
              |||||| |||||||||||||||||||||| |||||||||
Sbjct: 132934 caaaaccttaggaattccttgatagttggcataaattcg 132896

---

>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score =  276 bits (139), Expect = 2e-71
 Identities = 154/159 (96%)
 Strand = Plus / Minus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 17168 ctataggcggggcgattaccatatataacataaaacttctcccccaattctgtttagtcg 17109

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 17108 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 17049

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 17048 caaaaccttaggaattccttgatagttggcataaattcg 17010

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  268 bits (135), Expect = 6e-69
 Identities = 154/159 (96%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76684 ctataggcggg-cgattaccatatataacataagacttctcccccaattctgtttagtcg 76742

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 76743 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 76802

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 76803 caaaaccttaggaattccttgatagttggcataaattcg 76841

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  262 bits (132), Expect = 4e-67
 Identities = 153/160 (95%)
 Strand = Plus / Plus

                                                                         
Query: 43    actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
             |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 78472 actataggtggggccattaccatatataacataaaacttctcccccaattctgtttagtc 78531

                                                                         
Query: 103   gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 78532 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgc 78591

                                                     
Query: 163   ccaaaactttaggaattccttgatagttggtataaattcg 202
             ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 78592 ccaaaaccttaggaattccttgatagttggcataaattcg 78631

---

>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16
            partial
          Length = 1287

 Score =  262 bits (132), Expect = 4e-67
 Identities = 153/160 (95%)
 Strand = Plus / Minus

                                                                        
Query: 43   actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
            |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1197 actataggtggggccattaccatatataacataaaacttctcccccaattctgtttagtc 1138

                                                                        
Query: 103  gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 1137 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgc 1078

                                                    
Query: 163  ccaaaactttaggaattccttgatagttggtataaattcg 202
            ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 1077 ccaaaaccttaggaattccttgatagttggcataaattcg 1038

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  262 bits (132), Expect = 4e-67
 Identities = 153/160 (95%)
 Strand = Plus / Plus

                                                                         
Query: 43    actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
             |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 78488 actataggtggggccattaccatatataacataaaacttctcccccaattctgtttagtc 78547

                                                                         
Query: 103   gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 78548 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgc 78607

                                                     
Query: 163   ccaaaactttaggaattccttgatagttggtataaattcg 202
             ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 78608 ccaaaaccttaggaattccttgatagttggcataaattcg 78647

---

>ref|XM_450631.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2141

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 ctatgggcgaggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1956

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1955 agcttcttgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1896

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 1895 caaaaccttaggaattccttgatagttggcataaattcg 1857

---

>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 13440 ctataggcgaggcgattaccatatataacataagacttctcccccaattttgtttagtca 13499

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 13500 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 13559

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 13560 caaaaccttaggaattccttgatagttggcataaattcg 13598

---

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                          
Query: 43     actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
              |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 147046 actataggtggggcgattaccatatataacataagacttctcctccaattttgtttagtc 146987

                                                                          
Query: 103    gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 146986 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccag 146927

                                                     
Query: 163    ccaaaactttaggaattccttgatagttggtataaattc 201
              ||||||| |||||||||||||||||||||| ||||||||
Sbjct: 146926 ccaaaaccttaggaattccttgatagttggcataaattc 146888

---

>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
            complete sequence
          Length = 102567

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                        
Query: 43   actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
            |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 6233 actataggtggggcgattaccatatataacataagacttctcctccaattttgtttagtc 6174

                                                                        
Query: 103  gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 6173 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccag 6114

                                                   
Query: 163  ccaaaactttaggaattccttgatagttggtataaattc 201
            ||||||| |||||||||||||||||||||| ||||||||
Sbjct: 6113 ccaaaaccttaggaattccttgatagttggcataaattc 6075

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 24637254 ctataggcgaggcgattaccatatataacataagacttctcccccaattttgtttagtca 24637313

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 24637314 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 24637373

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 24637374 caaaaccttaggaattccttgatagttggcataaattcg 24637412

---

>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 69300 ctataggcgaggcgattaccatatataacataagacttctcccccaattttgtttagtca 69359

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 69360 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 69419

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 69420 caaaaccttaggaattccttgatagttggcataaattcg 69458

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11897187 ctatgggcgaggcgattaccatatataacataagacttctcccccaattctgtttagtcg 11897128

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 11897127 agcttcttgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 11897068

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 11897067 caaaaccttaggaattccttgatagttggcataaattcg 11897029

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Plus

                                                                            
Query: 44       ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
                ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 24554723 ctataggcgaggcgattaccatatataacataagacttctcccccaattttgtttagtca 24554782

                                                                            
Query: 104      agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 24554783 agcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 24554842

                                                       
Query: 164      caaaactttaggaattccttgatagttggtataaattcg 202
                |||||| |||||||||||||||||||||| |||||||||
Sbjct: 24554843 caaaaccttaggaattccttgatagttggcataaattcg 24554881

---

>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1001_G09
          Length = 118018

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                         
Query: 44    ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
             |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78677 ctatgggcgaggcgattaccatatataacataagacttctcccccaattctgtttagtcg 78618

                                                                         
Query: 104   agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
             ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 78617 agcttcttgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 78558

                                                    
Query: 164   caaaactttaggaattccttgatagttggtataaattcg 202
             |||||| |||||||||||||||||||||| |||||||||
Sbjct: 78557 caaaaccttaggaattccttgatagttggcataaattcg 78519

---

>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0441A12
          Length = 185437

 Score =  260 bits (131), Expect = 1e-66
 Identities = 152/159 (95%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtcg 103
            |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 ctatgggcgaggcgattaccatatataacataagacttctcccccaattctgtttagtcg 1608

                                                                        
Query: 104  agcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccacc 163
            ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 1607 agcttcttgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgcc 1548

                                                   
Query: 164  caaaactttaggaattccttgatagttggtataaattcg 202
            |||||| |||||||||||||||||||||| |||||||||
Sbjct: 1547 caaaaccttaggaattccttgatagttggcataaattcg 1509

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  254 bits (128), Expect = 9e-65
 Identities = 152/160 (95%)
 Strand = Plus / Plus

                                                                          
Query: 43     actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
              |||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 140756 actataggtgcggccattaccatatataacataaaacttctcccccaattctgtttagtc 140815

                                                                          
Query: 103    gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 140816 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgc 140875

                                                      
Query: 163    ccaaaactttaggaattccttgatagttggtataaattcg 202
              ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 140876 ccaaaaccttaggaattccttgatagttggcataaattcg 140915

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  254 bits (128), Expect = 9e-65
 Identities = 152/160 (95%)
 Strand = Plus / Plus

                                                                         
Query: 43    actataggcggggcgattaccatatataacataagacttctcccccaattctgtttagtc 102
             |||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 79130 actataggtgcggccattaccatatataacataaaacttctcccccaattctgtttagtc 79189

                                                                         
Query: 103   gagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattccac 162
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 79190 gagcttctcgatctgtcattatacctcgagaagtagaaagaatagcaattcccattccgc 79249

                                                     
Query: 163   ccaaaactttaggaattccttgatagttggtataaattcg 202
             ||||||| |||||||||||||||||||||| |||||||||
Sbjct: 79250 ccaaaaccttaggaattccttgatagttggcataaattcg 79289

---

>gb|DQ069533.1| Typha latifolia ribosomal protein S8 (rps8) gene, partial cds;
           chloroplast
          Length = 402

 Score =  157 bits (79), Expect = 2e-35
 Identities = 112/123 (91%)
 Strand = Plus / Minus

                                                                       
Query: 80  ttctcccccaattctgtttagtcgagcttctcgatctgtcattatccctcgagaagtaga 139
           |||||| |||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 ttctcctccaattctttctagtcgagcttctcgatctgtcattatacctcgagaagtaga 325

                                                                       
Query: 140 aagaatagcaattcccattccacccaaaactttaggaattccttgatagttggtataaat 199
           ||||||  |||||||||||||||| ||||  |||||||||| ||||||||||| ||||||
Sbjct: 324 aagaattacaattcccattccacctaaaatcttaggaattcgttgatagttggaataaat 265

              
Query: 200 tcg 202
           |||
Sbjct: 264 tcg 262

---

>gb|DQ069534.1| Yucca schidigera ribosomal protein S8 (rps8) gene, partial cds;
           chloroplast
          Length = 396

 Score =  137 bits (69), Expect = 1e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 62  ccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtcat 121
           |||||||||||| || | |||||| |||||| | | ||||| ||||||||||||||||||
Sbjct: 396 ccatatataacacaaaatttctcctccaattttttctagtctagcttctcgatctgtcat 337

                                                                       
Query: 122 tatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattcc 181
           ||| ||||||||||||||||||||  |||||||||||||||| ||||  |||||||||  
Sbjct: 336 tatgcctcgagaagtagaaagaattacaattcccattccacctaaaatcttaggaatttt 277

                                
Query: 182 ttgatagttggtataaattcg 202
           ||||||||||| ||| |||||
Sbjct: 276 ttgatagttggaatagattcg 256

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  131 bits (66), Expect = 9e-28
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| |||||||| | ||||||||| ||||| |||
Sbjct: 82070 gattaccatatataacacaaaatttctccgccaattctttctagtcgagcctctcggtct 82129

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||||||||||||||||||||  ||||||| || || ||||||| | |||||
Sbjct: 82130 gtcattatacctcgagaagtagaaagaattacaattccgatcccgcccaaaattctagga 82189

                           
Query: 177   attccttgatagtt 190
             |||| |||||||||
Sbjct: 82190 attcgttgatagtt 82203

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  129 bits (65), Expect = 4e-27
 Identities = 125/145 (86%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             |||||||||||||||| || | |||||| |||||| | | || |||||||||||||||||
Sbjct: 81957 attaccatatataacacaaaatttctcctccaattttttctaatcgagcttctcgatctg 82016

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             | ||||| ||||||||||||||||| ||  |||||||||||||||| ||||  |||||||
Sbjct: 82017 ttattatacctcgagaagtagaaaggattacaattcccattccacctaaaatcttaggaa 82076

                                      
Query: 178   ttccttgatagttggtataaattcg 202
             ||  ||||||||||| ||| |||||
Sbjct: 82077 tttgttgatagttggaatatattcg 82101

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  123 bits (62), Expect = 2e-25
 Identities = 107/122 (87%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||| ||||||||| | ||| ||||||||| | ||| ||||||||||||||||||
Sbjct: 75772 attaccatacataacataaaagttcgcccccaatttttttttgtcgagcttctcgatctg 75831

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             |||| || |||||||| || ||||||||  |||||||||||||||| |||||||| ||||
Sbjct: 75832 tcataattcctcgagacgtggaaagaattacaattcccattccacctaaaacttttggaa 75891

               
Query: 178   tt 179
             ||
Sbjct: 75892 tt 75893

---

>emb|X03496.1|CHSOINFA Spinach plastid genes infA, rps 11 and rpoA for initiation factor
           IF-1, ribosomal protein S11 and RNA polymerase alpha
           subunit
          Length = 2500

 Score =  117 bits (59), Expect = 1e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                       
Query: 57  gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
           |||||||||||||||||||| | |||||| |||||||  | ||||||||| || ||||||
Sbjct: 160 gattaccatatataacataaaatttctccgccaattccttctagtcgagcctcccgatct 101

                                                                       
Query: 117 gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
           |||||||| ||||  || ||||||||||| ||||| ||||||||||| |||| | |||||
Sbjct: 100 gtcattatacctctcgaggtagaaagaattgcaatccccattccacctaaaattctagga 41

                      
Query: 177 attccttgata 187
           |||| ||||||
Sbjct: 40  attcgttgata 30

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  117 bits (59), Expect = 1e-23
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||||||||||||||| | |||||| |||||||  | ||||||||| || ||||||
Sbjct: 78680 gattaccatatataacataaaatttctccgccaattccttctagtcgagcctcccgatct 78739

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||||  || ||||||||||| ||||| ||||||||||| |||| | |||||
Sbjct: 78740 gtcattatacctctcgaggtagaaagaattgcaatccccattccacctaaaattctagga 78799

                        
Query: 177   attccttgata 187
             |||| ||||||
Sbjct: 78800 attcgttgata 78810

---

>gb|AF206521.1|AF206521 Spinacia oleracea ribosomal protein S8 (rps8) gene, complete cds;
           infA pseudogene, complete sequence; and ribosomal
           protein L36 (rpl36) gene, complete cds; chloroplast
           genes for chloroplast products
          Length = 1114

 Score =  117 bits (59), Expect = 1e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                       
Query: 57  gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
           |||||||||||||||||||| | |||||| |||||||  | ||||||||| || ||||||
Sbjct: 434 gattaccatatataacataaaatttctccgccaattccttctagtcgagcctcccgatct 375

                                                                       
Query: 117 gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
           |||||||| ||||  || ||||||||||| ||||| ||||||||||| |||| | |||||
Sbjct: 374 gtcattatacctctcgaggtagaaagaattgcaatccccattccacctaaaattctagga 315

                      
Query: 177 attccttgata 187
           |||| ||||||
Sbjct: 314 attcgttgata 304

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  115 bits (58), Expect = 5e-23
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| |||||||| | ||| ||||| ||||| |||
Sbjct: 84967 gattaccatatataacacaaaatttctccaccaattctttctaggcgagcctctcggtct 85026

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| |||| |||||||||||||||  |||| ||||| ||||| |||| | |||||
Sbjct: 85027 gtcattatacctctagaagtagaaagaattacaatccccataccacctaaaattctagga 85086

                           
Query: 177   attccttgatagtt 190
             |||| |||||||||
Sbjct: 85087 attcgttgatagtt 85100

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  111 bits (56), Expect = 8e-22
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 63    catatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtcatt 122
             |||||||||||||| | |||||| |||||||  | ||||||||| || ||||||||||||
Sbjct: 79871 catatataacataacatttctcctccaattccctgtagtcgagcctcccgatctgtcatt 79930

                                                                         
Query: 123   atccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattcct 182
             || |||| ||||||||||| |||  ||||||| ||||| || ||||  || |||||||||
Sbjct: 79931 atacctctagaagtagaaacaattacaattcctattccgcctaaaatcttgggaattcct 79990

                                 
Query: 183   tgatagttggtataaattcg 202
             |||||||||| ||| |||||
Sbjct: 79991 tgatagttggaatagattcg 80010

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  107 bits (54), Expect = 1e-20
 Identities = 120/142 (84%)
 Strand = Plus / Plus

                                                                         
Query: 61    accatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtca 120
             |||||||||||||||| |  ||||| |||||||  | | ||||||| |||||||||||||
Sbjct: 86760 accatatataacataaaatctctcctccaattccttctcgtcgagcctctcgatctgtca 86819

                                                                         
Query: 121   ttatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattc 180
             |||| ||||||||||||||||||||  |||  |||||||||||  |||   |||||||||
Sbjct: 86820 ttatacctcgagaagtagaaagaattacaacccccattccacctgaaatcctaggaattc 86879

                                   
Query: 181   cttgatagttggtataaattcg 202
              ||||||||||| ||| |||||
Sbjct: 86880 gttgatagttggaatagattcg 86901

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  107 bits (54), Expect = 1e-20
 Identities = 120/142 (84%)
 Strand = Plus / Plus

                                                                         
Query: 61    accatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtca 120
             ||||||||||||| || | |||||| |||||||  | |||||||||||||||||||||||
Sbjct: 81351 accatatataacacaaaatttctcctccaattccttctagtcgagcttctcgatctgtca 81410

                                                                         
Query: 121   ttatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattc 180
             |||| ||  ||||||||||||||||  | || ||||||||||| ||||   |||||||||
Sbjct: 81411 ttataccctgagaagtagaaagaattacgatccccattccacctaaaatcctaggaattc 81470

                                   
Query: 181   cttgatagttggtataaattcg 202
              |||||| |||| ||| |||||
Sbjct: 81471 gttgataattggaatagattcg 81492

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  107 bits (54), Expect = 1e-20
 Identities = 114/134 (85%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||  | ||||||||| ||||| |||
Sbjct: 84892 gattaccatatataacacaaaatttctccgccgattccttctagtcgagcctctcggtct 84951

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||||||||||||||||||||  |||| ||||| || || |||| | |||||
Sbjct: 84952 gtcattatacctcgagaagtagaaagaattacaatccccatcccgcctaaaattctagga 85011

                           
Query: 177   attccttgatagtt 190
             |||| |||||||||
Sbjct: 85012 attcgttgatagtt 85025

---

>gb|DQ069532.1| Ranunculus macranthus ribosomal protein S8 (rps8) gene, partial
           cds; chloroplast
          Length = 396

 Score =  105 bits (53), Expect = 5e-20
 Identities = 119/141 (84%)
 Strand = Plus / Minus

                                                                       
Query: 62  ccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtcat 121
           |||||||||||| || | ||||||||| ||||| | ||||||||| ||||| ||||||||
Sbjct: 396 ccatatataacacaaaatttctcccccgattctttctagtcgagcctctcggtctgtcat 337

                                                                       
Query: 122 tatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattcc 181
           ||  ||||||||||| ||||||||  |||| |||||||| || ||||   ||||||||| 
Sbjct: 336 tagacctcgagaagtcgaaagaattacaatgcccattcctcctaaaatcctaggaattct 277

                                
Query: 182 ttgatagttggtataaattcg 202
           ||||||||||| ||| |||||
Sbjct: 276 ttgatagttggaatagattcg 256

---

>gb|AF347627.1|AF347627 Glycine max ribosomal protein S8 (rps8) gene, partial cds, and
           ribosomal protein L36 (rpl36), complete cds; chloroplast
           genes for chloroplast products
          Length = 752

 Score =  105 bits (53), Expect = 5e-20
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                       
Query: 57  gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
           |||||||||||||||||||| |||||||| |||||||| | || |||||| |||||||||
Sbjct: 169 gattaccatatataacataaaacttctccgccaattctttctaatcgagcctctcgatct 110

                                        
Query: 117 gtcattatccctcgagaagtagaaagaat 145
           |||||||| |||| |||||| ||||||||
Sbjct: 109 gtcattatacctctagaagttgaaagaat 81

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  105 bits (53), Expect = 5e-20
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||||||||||||| ||||| || || ||||| | || |||||| ||||||||||
Sbjct: 46133 attaccatatataacataaaacttcgccgccgattctttctaatcgagcctctcgatctg 46074

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             ||||||| || | |||||||||||||||  |||| |||||||| || |||||| | ||||
Sbjct: 46073 tcattatacccctagaagtagaaagaattacaatccccattcctcctaaaactctcggaa 46014

                          
Query: 178   ttccttgatagtt 190
             ||  |||||||||
Sbjct: 46013 tttgttgatagtt 46001

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  105 bits (53), Expect = 5e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||||||||||||||| |||||||| |||||||| | || |||||| |||||||||
Sbjct: 79005 gattaccatatataacataaaacttctccgccaattctttctaatcgagcctctcgatct 79064

                                          
Query: 117   gtcattatccctcgagaagtagaaagaat 145
             |||||||| |||| |||||| ||||||||
Sbjct: 79065 gtcattatacctctagaagttgaaagaat 79093

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  103 bits (52), Expect = 2e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||| |||||||||||||||||||||
Sbjct: 79150 gattaccatatataacacaaaatttctccgccgattctttttagtcgagcttctcgatct 79209

                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattcc 160
             |||||||| ||| ||||||| ||||| ||  ||||||| |||||
Sbjct: 79210 gtcattataccttgagaagttgaaaggattacaattcctattcc 79253

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  101 bits (51), Expect = 8e-19
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | ||||||||| ||||| |||
Sbjct: 82848 gattaccagatataacacaaaatttctccacctattccttctagtcgagcctctcggtct 82907

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||||||||||||||||||||  |||| ||||||||||| |||| |  ||||
Sbjct: 82908 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaattcgagga 82967

                        
Query: 177   attccttgata 187
             |||| ||||||
Sbjct: 82968 attcgttgata 82978

---

>gb|DQ069529.1| Acorus americanus ribosomal protein S8 (rps8) gene, partial cds;
           chloroplast
          Length = 393

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 116/138 (84%)
 Strand = Plus / Minus

                                                                       
Query: 65  tatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtcattat 124
           |||||||||||| | |||||| |||||||  | ||||||||| || ||||||||||||||
Sbjct: 393 tatataacataacatttctcctccaattccctgtagtcgagcctcccgatctgtcattat 334

                                                                       
Query: 125 ccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaattccttg 184
            |||| ||||||||||| |||  |||| || ||||| || ||||  || |||||||||||
Sbjct: 333 acctctagaagtagaaacaattacaatccctattccgcctaaaatcttgggaattccttg 274

                             
Query: 185 atagttggtataaattcg 202
           |||||||| ||| |||||
Sbjct: 273 atagttggaatagattcg 256

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||| | ||||||||| ||||| |||
Sbjct: 80035 gattaccatatataacacaaaatttctccgcctattctttctagtcgagcctctcggtct 80094

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||  |||| |||||||||||  |||| ||||| ||||| |||| | |||||
Sbjct: 80095 gtcattataccctgagaggtagaaagaattacaatccccatcccacctaaaattctagga 80154

                           
Query: 177   attccttgatagtt 190
             |||| |||||||||
Sbjct: 80155 attctttgatagtt 80168

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | ||| || || ||||  | ||||||||||||||| |||
Sbjct: 82402 gattaccatatataacacaaaatttcgccgccgattccctgtagtcgagcttctcggtct 82461

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| || |||||||||||||||||  |||| |||||||| || |||| | |||||
Sbjct: 82462 gtcattataccccgagaagtagaaagaattacaatgcccattcctcctaaaattctagga 82521

                           
Query: 177   attccttgatagtt 190
             |||  |||||||||
Sbjct: 82522 attttttgatagtt 82535

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete
             sequence
          Length = 163935

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||  | ||||| ||| ||||| |||
Sbjct: 85054 gattaccatatataacacaaaatttctccgccgattccttctagtctagcctctcggtct 85113

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||||||||||||||||||||||||  |||| ||||| || || |||| | |||||
Sbjct: 85114 gtcattatccctcgagaagtagaaagaattacaatccccatcccgcctaaaattctagga 85173

                           
Query: 177   attccttgatagtt 190
             |||  |||||||||
Sbjct: 85174 attttttgatagtt 85187

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | ||| || || ||||  | ||||||||||||||| |||
Sbjct: 82630 gattaccatatataacacaaaatttcgccgccgattccctgtagtcgagcttctcggtct 82689

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| || |||||||||||||||||  |||| |||||||| || |||| | |||||
Sbjct: 82690 gtcattataccccgagaagtagaaagaattacaatgcccattcctcctaaaattctagga 82749

                           
Query: 177   attccttgatagtt 190
             |||  |||||||||
Sbjct: 82750 attttttgatagtt 82763

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||| | ||||||||| ||||| |||
Sbjct: 80033 gattaccatatataacacaaaatttctccgcctattctttctagtcgagcctctcggtct 80092

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| ||  |||| |||||||||||  |||| ||||| ||||| |||| | |||||
Sbjct: 80093 gtcattataccctgagaggtagaaagaattacaatccccatcccacctaaaattctagga 80152

                           
Query: 177   attccttgatagtt 190
             |||| |||||||||
Sbjct: 80153 attctttgatagtt 80166

---

>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
          Length = 129728

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 112/133 (84%)
 Strand = Plus / Plus

                                                                          
Query: 58     attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
              |||| |||||||||||||| ||||| || || ||||| | || |||||| ||||||||||
Sbjct: 124793 attatcatatataacataaaacttcgccgccgattctttctaatcgagcctctcgatctg 124852

                                                                          
Query: 118    tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
              ||||||| || | |||||||||||||||  |||| |||||||| || |||||| | ||||
Sbjct: 124853 tcattatacccctagaagtagaaagaattacaatccccattcctcctaaaactctcggaa 124912

                           
Query: 178    ttccttgatagtt 190
              ||  |||||||||
Sbjct: 124913 tttgttgatagtt 124925

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 61    accatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtca 120
             ||||||||||| | || | |||||| |||||||| | |||||||||||||||||||||||
Sbjct: 86067 accatatataaaacaaaatttctcctccaattctttctagtcgagcttctcgatctgtca 86126

                                      
Query: 121   ttatccctcgagaagtagaaagaat 145
             |||| |||| |||||||||||||||
Sbjct: 86127 ttatacctctagaagtagaaagaat 86151

---

>gb|AY016336.1| Phragmites australis rpl36-rps8 intergenic spacer, chloroplast
           sequence
          Length = 911

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 34  aattcgagcactataggcggggcgattaccatatataacataagacttctcccccaattc 93
           |||||| | |||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 839 aattcgtgtactataggcgaggccattaccatatataacataagacttctcccccaattc 898

               
Query: 94  tgtt 97
           ||||
Sbjct: 899 tgtt 902

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | ||||||||| ||||| |||
Sbjct: 81879 gattaccagatataacacaaaatttctccacctattccttctagtcgagcctctcggtct 81938

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 81939 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 81990

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | ||||||||| ||||| |||
Sbjct: 81876 gattaccagatataacacaaaatttctccacctattccttctagtcgagcctctcggtct 81935

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 81936 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 81987

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | ||||||||| ||||| |||
Sbjct: 81783 gattaccagatataacacaaaatttctccacctattccttctagtcgagcctctcggtct 81842

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 81843 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 81894

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
             strain:Columbia
          Length = 154478

 Score = 95.6 bits (48), Expect = 5e-17
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             ||||||||||||||||| || | |||||| || ||||| ||||||||||||||||| |||
Sbjct: 80066 gattaccatatataacacaaaatttctccgccgattctttttagtcgagcttctcggtct 80125

                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattcc 160
             |||||||| ||| ||||||| ||||| ||  ||||||| |||||
Sbjct: 80126 gtcattataccttgagaagtcgaaaggattacaattcctattcc 80169

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             |||||||||||||||| || | |||||| || ||||| | ||||||||| || || ||||
Sbjct: 79472 attaccatatataacacaaaatttctccgcctattctttctagtcgagcctcccggtctg 79531

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             ||||||| || ||||| |||||||||||  ||| |||||| || || |||| | ||||||
Sbjct: 79532 tcattataccccgagaggtagaaagaattacaactcccatcccgcctaaaattctaggaa 79591

                          
Query: 178   ttccttgatagtt 190
             ||| |||||||||
Sbjct: 79592 ttctttgatagtt 79604

---

>gb|AF536226.1| Vigna angularis chloroplast S10A operon, partial sequence
          Length = 6285

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 57   gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
            |||||||||||||||||||| |||||||| || ||| | | || |||||| |||||||||
Sbjct: 3614 gattaccatatataacataaaacttctccgccgattttttctaatcgagcctctcgatct 3555

                                         
Query: 117  gtcattatccctcgagaagtagaaagaat 145
            |||||||| |||| |||||| ||||||||
Sbjct: 3554 gtcattatacctctagaagttgaaagaat 3526

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||||||||||||| |||||||| || ||| | | || |||||| ||||||||||
Sbjct: 77896 attaccatatataacataaaacttctccgccgattttttctaatcgagcctctcgatctg 77955

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             ||||||| || |  ||||||||||||||  |||| ||||| || || |||| | ||||||
Sbjct: 77956 tcattatacccctcgaagtagaaagaattacaatccccatacctcctaaaattctaggaa 78015

                          
Query: 178   ttccttgatagtt 190
             ||  |||||||||
Sbjct: 78016 ttttttgatagtt 78028

---

>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b,
             complete sequence
          Length = 66087

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||||||||||||| |||||||| || ||| | | || |||||| ||||||||||
Sbjct: 44388 attaccatatataacataaaacttctccgccgattttttctaatcgagcctctcgatctg 44447

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             ||||||| || |  ||||||||||||||  |||| ||||| || || |||| | ||||||
Sbjct: 44448 tcattatacccctcgaagtagaaagaattacaatccccatacctcctaaaattctaggaa 44507

                          
Query: 178   ttccttgatagtt 190
             ||  |||||||||
Sbjct: 44508 ttttttgatagtt 44520

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || |  ||||| || ||||  | ||||||||| ||||| |||
Sbjct: 82603 gattaccagatataacacaaaatctctccacctattccttctagtcgagcctctcggtct 82662

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 82663 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 82714

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | |||||| || ||||| |||
Sbjct: 81732 gattaccagatataacacaaaatttctccacctattccttctagtcgcgcctctcggtct 81791

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 81792 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 81843

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || |  ||||| || ||||  | ||||||||| ||||| |||
Sbjct: 82601 gattaccagatataacacaaaatctctccacctattccttctagtcgagcctctcggtct 82660

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 82661 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 82712

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || |  ||||| || ||||  | ||||||||| ||||| |||
Sbjct: 82364 gattaccagatataacacaaaatctctccacctattccttctagtcgagcctctcggtct 82423

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 82424 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 82475

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||| |||||||| || | |||||| || ||||  | |||||| || ||||| |||
Sbjct: 81744 gattaccagatataacacaaaatttctccacctattccttctagtcgcgcctctcggtct 81803

                                                                 
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||||||| ||||||||||||||||||||  |||| ||||||||||| ||||
Sbjct: 81804 gtcattatacctcgagaagtagaaagaattacaatccccattccacctaaaa 81855

---

>gb|DQ069531.1| Nuphar advena ribosomal protein S8 (rps8) gene, partial cds;
           chloroplast
          Length = 396

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 62  ccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctgtcat 121
           |||||||||| | || | |||||| |||||||  | ||||||||||||||||||||||||
Sbjct: 396 ccatatataaaacaaaatttctcctccaattccttctagtcgagcttctcgatctgtcat 337

                                  
Query: 122 tatccctcgagaagtagaaagaa 144
           ||| |||| ||||||||||||||
Sbjct: 336 tatacctctagaagtagaaagaa 314

---

>gb|DQ108521.1| Corchorus olitorius SSR marker J-122-M13F genomic sequence
          Length = 854

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 57  gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
           ||||||||||||||||| || | ||| || || ||||  | ||||||||| || ||||||
Sbjct: 501 gattaccatatataacacaaaatttccccgccgattccttctagtcgagcctcccgatct 442

                                                                       
Query: 117 gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
           |||||||| || |||||||||||||||||  |||| ||||| || || |||| | |||||
Sbjct: 441 gtcattataccccgagaagtagaaagaattacaatccccatcccgcctaaaattctagga 382

                         
Query: 177 attccttgatagtt 190
           |||  |||||||||
Sbjct: 381 attttttgatagtt 368

---

>emb|AJ001024.1|CLPAPETBD Picea abies chloroplast DNA petB and petD genes
          Length = 4707

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 118/144 (81%)
 Strand = Plus / Plus

                                                                        
Query: 58   attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
            ||||||||| ||||||||| | |||||| |||||| | ||  ||||||| |||||||| |
Sbjct: 4295 attaccatacataacataatatttctcctccaatttttttctgtcgagcctctcgatccg 4354

                                                                        
Query: 118  tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
            |||  |||||| | ||||||||||||||  | || ||||||||||| | ||| || ||||
Sbjct: 4355 tcaaaatcccttgggaagtagaaagaattacgatccccattccacctagaacctttggaa 4414

                                    
Query: 178  ttccttgatagttggtataaattc 201
            || || |||| |||| ||||||||
Sbjct: 4415 tttctcgataattggaataaattc 4438

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 118/144 (81%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||| ||||||||| | |||||| |||||| | ||  |||||||||||||||| |
Sbjct: 58104 attaccatacataacataaaatttctcctccaatttttttctgtcgagcttctcgatccg 58163

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             |||  || ||| | ||||||||||||||  | || ||||||||||| | |||||| ||||
Sbjct: 58164 tcaaaattccttgggaagtagaaagaattacgatccccattccacctagaacttttggaa 58223

                                     
Query: 178   ttccttgatagttggtataaattc 201
             || || |||| || | ||||||||
Sbjct: 58224 tttctcgataattagaataaattc 58247

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 118/144 (81%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||| ||||||||| | |||||| |||||| | ||  |||||||||||||||| |
Sbjct: 60008 attaccatacataacataaaatttctcctccaatttttttctgtcgagcttctcgatccg 60067

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             |||  || ||| | ||||||||||||||  | || ||||||||||| | |||||| ||||
Sbjct: 60068 tcaaaattccttgggaagtagaaagaattacgatccccattccacctagaacttttggaa 60127

                                     
Query: 178   ttccttgatagttggtataaattc 201
             || || |||| || | ||||||||
Sbjct: 60128 tttctcgataattagaataaattc 60151

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 101/122 (82%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||| ||||||||| | |||||| |||||| | |||  ||  ||||||||||| |
Sbjct: 79163 attaccatacataacataaaatttctcctccaatttttttttctcttgcttctcgatcgg 79222

                                                                         
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttaggaa 177
             |||| || |||  ||| || ||||||||| |||||||||| ||||| |||||||| ||||
Sbjct: 79223 tcataattccttcagacgttgaaagaataacaattcccatcccacctaaaacttttggaa 79282

               
Query: 178   tt 179
             ||
Sbjct: 79283 tt 79284

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 109/134 (81%)
 Strand = Plus / Plus

                                                                         
Query: 57    gattaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatct 116
             |||||||||||| |||| || | |||||| || ||||  | ||||||||| || || |||
Sbjct: 84527 gattaccatatagaacacaaaatttctccaccgattccttctagtcgagcctcccggtct 84586

                                                                         
Query: 117   gtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaactttagga 176
             |||||||| || |||||||||||||||||  |||| ||||| || || ||||   |||||
Sbjct: 84587 gtcattataccccgagaagtagaaagaattacaatccccatcccgcctaaaatcctagga 84646

                           
Query: 177   attccttgatagtt 190
             |||  |||||||||
Sbjct: 84647 atttgttgatagtt 84660

---

>gb|DQ069530.1| Ginkgo biloba ribosomal protein S8 (rps8) gene, partial cds;
           chloroplast
          Length = 393

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                       
Query: 84  cccccaattctgtttagtcgagcttctcgatctgtcattatccctcgagaagtagaaaga 143
           ||||||||||  ||| ||||||| |||||||| ||||| || ||| |||||||||||| |
Sbjct: 371 cccccaattccttttcgtcgagcctctcgatccgtcataattccttgagaagtagaaaca 312

                                             
Query: 144 atagcaattcccattccacccaaaactttaggaa 177
           ||  | |  ||||| |||||||||||||||||||
Sbjct: 311 attacgacccccatcccacccaaaactttaggaa 278

---

>gb|DQ269011.1| Dasypyrum breviaristatum InfA gene, complete cds; chloroplast
          Length = 601

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|DQ269010.1| Haynaldia villosa InfA gene, complete cds; chloroplast
          Length = 601

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|DQ268512.1| Thinopyrum intermedium subsp. intermedium InfA gene, complete
          cds; chloroplast
          Length = 589

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|DQ268510.1| Thinopyrum intermedium InfA gene, complete cds; chloroplast
          Length = 603

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|DQ268509.1| Thinopyrum bessarabicum InfA gene, complete cds; chloroplast
          Length = 601

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|DQ257630.1| Secale sylvestre InfA gene, complete cds; chloroplast
          Length = 602

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 51/55 (92%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                 
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcgggg 55
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttttattttaaaaatagg-aagggcgagatag-aattcgagcactataggcgggg 9

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             |||||||||||||||| || | |||||| || ||||  ||||||||||| || | |||||
Sbjct: 16464 attaccatatataacacaacaattctccgccgattccttttagtcgagcctccctatctg 16523

                                                        
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattcc 160
             ||||||| || | ||| ||| |||||||  ||||||| |||||
Sbjct: 16524 tcattatacccctagaggtataaagaattacaattcctattcc 16566

---

>gb|DQ269013.1| Lophopyrum elongatum InfA gene, complete cds; chloroplast
          Length = 584

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 56/62 (90%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||  |||||||||
Sbjct: 60 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactatagcgggggcgatt 3

            
Query: 61 ac 62
          ||
Sbjct: 2  ac 1

---

>gb|DQ269012.1| Thinopyrum intermedium InfA gene, complete cds; chloroplast
          Length = 595

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 56/62 (90%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||  |||||||||
Sbjct: 60 ttttattttcaaaatagg-aagggcgagatag-aattcgagcactatagcgggggcgatt 3

            
Query: 61 ac 62
          ||
Sbjct: 2  ac 1

---

>gb|DQ268508.1| Secale strictum subsp. africanum InfA gene, complete cds;
          chloroplast
          Length = 601

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 56/62 (90%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
          ||||||||| |||||||| ||||||||| ||| ||||||||||||||||  |||||||||
Sbjct: 60 ttttattttaaaaatagg-aagggcgagatag-aattcgagcactatagcgggggcgatt 3

            
Query: 61 ac 62
          ||
Sbjct: 2  ac 1

---

>gb|AF050665.1|AF050665 Spirogyra maxima tRNA-Ile gene, complete sequence; and ribosomal
            protein L23 (rpl23), ribosomal protein L2 (rpl2),
            ribosomal protein S19 (rps19), ribosomal protein L22
            (rpl22), ribosomal protein S3 (rps3), ribosomal protein
            L16 (rpl16), ribosomal protein L14 (rpl14), ribosomal
            protein S8 (rps8), initiation factor A (infA), ribosomal
            protein L36 (rpl36), ribosomal protein S11 (rps11), and
            RNA polymerase alpha subunit (rpoA) genes, complete cds,
            chloroplast genes for chloroplast products
          Length = 8794

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 131  agaagtagaaagaatagcaattcccattccacccaaaactttaggaattccttg 184
            |||||| ||||||||  ||||||| |||||||| ||||||||||||||| ||||
Sbjct: 6264 agaagttgaaagaatgacaattcctattccacctaaaactttaggaatttcttg 6211

---

>dbj|AB087468.1| Anthoceros formosae chloroplast rpl36, infA, rps8 mRNA for
           ribosomal protein L36, initiation factor 1, ribosomal
           protein S8, complete cds
          Length = 1015

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 102 cgagcttctcgatctgtcattatccctcgagaagtagaaagaatagcaattcccattcca 161
           |||||||| ||||| || || || ||||||||||| || | |||| |||||||| | |||
Sbjct: 651 cgagcttcccgatccgtaataattcctcgagaagttgataaaataacaattcccgtacca 710

                                                   
Query: 162 cccaaaactttaggaattccttgatagttggtataaattc 201
           || |||||| | |||||| ||||||| ||||  |||||||
Sbjct: 711 cctaaaactctcggaatttcttgataattggagtaaattc 750

---

>gb|DQ289432.1| Pseudoroegneria spicata InfA gene, complete cds; chloroplast
          Length = 601

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 55/62 (88%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
          ||||||||| |||||||| ||||||||| ||| |||||| |||||||||  |||||||||
Sbjct: 60 ttttattttcaaaatagg-aagggcgagatag-aattcgggcactatagcgggggcgatt 3

            
Query: 61 ac 62
          ||
Sbjct: 2  ac 1

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 113   atctgtcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaacttt 172
             ||||||||  || ||| |||| || ||||||||||||||||| ||||| || ||||||||
Sbjct: 14450 atctgtcaaaatgccttgagatgtggaaagaatagcaattccaattccccctaaaacttt 14509

                   
Query: 173   aggaat 178
              |||||
Sbjct: 14510 tggaat 14515

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 152  tcccattccacccaaaactttaggaatt 179
            |||||||||||| |||||||||||||||
Sbjct: 6271 tcccattccacctaaaactttaggaatt 6244

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 143   aatagcaattcccattccacccaaaactttaggaattccttgat 186
             |||| ||||||| || ||||| ||||||||||||||| ||||||
Sbjct: 82833 aataacaattcctataccacctaaaactttaggaatttcttgat 82876

---

>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 218258

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 127    ctcgagaagtagaaagaatagca 149
              |||||||||||||||||||||||
Sbjct: 111790 ctcgagaagtagaaagaatagca 111812

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 58    attaccatatataacataagacttctcccccaattctgtttagtcgagcttctcgatctg 117
             ||||||||| || |||||  | |||||| |||| ||  ||| |||| |||||||||||||
Sbjct: 78749 attaccatacatgacatattatttctcctccaagtcgtttttgtcgggcttctcgatctg 78808

                                                                
Query: 118   tcattatccctcgagaagtagaaagaatagcaattcccattccacccaaaa 168
             |||| || ||   ||| || || | ||| ||||||||||||||||| ||||
Sbjct: 78809 tcataattccagaagatgttgagataattgcaattcccattccacctaaaa 78859

---

>gb|DQ268511.1| Psathyrostachys juncea InfA gene, complete cds; chloroplast
          Length = 599

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 54/62 (87%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                      
Query: 1  ttttattttnaaaataggcaagggcgaggtagtaattcgagcactataggcggggcgatt 60
          ||||||||| |||||||| | || |||| ||| ||||||||||||||||  |||||||||
Sbjct: 60 ttttattttcaaaataggga-ggtcgagatag-aattcgagcactatagcgggggcgatt 3

            
Query: 61 ac 62
          ||
Sbjct: 2  ac 1

---

>gb|AC136226.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0067H15,
              complete sequence
          Length = 184316

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 91/112 (81%), Gaps = 4/112 (3%)
 Strand = Plus / Plus

                                                                          
Query: 71     acataagacttctcccccaattctgtttagtcgagcttctcgatctgtcattatc-cctc 129
              |||||||||||||   ||||||| || || || |||  ||||||||||||||||| ||||
Sbjct: 143929 acataagacttct---ccaattcagtctaatctagcagctcgatctgtcattatctcctc 143985

                                                                  
Query: 130    gagaagtagaaagaatagcaattcccattccacccaaaactttaggaattcc 181
               |||| |||| |||||| ||| | | |||||  ||||||| || ||||||||
Sbjct: 143986 aagaactagagagaatatcaacttcaattccgtccaaaaccttgggaattcc 144037

---

>gb|AC150432.2| Branchiostoma floridae clone CH302-9D15, complete sequence
          Length = 173785

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   ccattccacccaaaactttag 174
             |||||||||||||||||||||
Sbjct: 22344 ccattccacccaaaactttag 22324

---

>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 117    gtcattatccctcgagaagtagaaagaatagcaattcccat 157
              |||||||| |||  ||||||||||| ||||||||| |||||
Sbjct: 357909 gtcattatacctttagaagtagaaataatagcaatacccat 357869

---

>gb|AC131921.9| Mus musculus chromosome 12, clone RP24-231P11, complete sequence
          Length = 163117

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    aagtagaaagaatagcaatt 152
              ||||||||||||||||||||
Sbjct: 146236 aagtagaaagaatagcaatt 146255

---

>gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome 12, complete sequence
          Length = 234400

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   aagtagaaagaatagcaatt 152
             ||||||||||||||||||||
Sbjct: 40874 aagtagaaagaatagcaatt 40893

---

>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence
          Length = 247769

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   cattccacccaaaactttaggaat 178
             ||||||||||||||||||| ||||
Sbjct: 85206 cattccacccaaaactttaagaat 85229

---

>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17,
             complete sequence
          Length = 163376

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 74    taagacttctcccccaattctgtttagt 101
             ||||| |||||| |||||||||||||||
Sbjct: 69344 taagaattctcctccaattctgtttagt 69317


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,454,145
Number of Sequences: 3902068
Number of extensions: 1454145
Number of successful extensions: 108325
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 107451
Number of HSP's gapped (non-prelim): 871
length of query: 203
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 181
effective length of database: 17,147,199,772
effective search space: 3103643158732
effective search space used: 3103643158732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---