ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22l03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U30323.1|TAU30323 Triticum aestivum beta 1,3-glucanase (Glc1) mRNA, complete cds Length = 2072 Score = 603 bits (304), Expect = e-169 Identities = 362/380 (95%), Gaps = 1/380 (0%) Strand = Plus / Minus Query: 176 ggctgtcagacacgagtatagaagaacatggcgcaagcccggcagtatcagcagtcctcc 235 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1574 ggctgtcagacacgagtatagaagaatatggcgcaagcccggcagtatgagcagtcctcc 1515 Query: 236 gtcgctgccgccaccgcggctccgagatggagatggtagtgggctgaaggctggcgcccc 295 |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 1514 gtcgctgccgccaccgcggctccgagctggagatggtagtgggctggaggctggcccccc 1455 Query: 296 cgccctcgtactgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 355 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1454 tgccctcgtactgccgtggcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 1395 Query: 356 actggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtg 415 ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1394 actggggtcgctggaggtgacgatgccggtgcccttgaagtcgcacgctaagtcggtgtg 1335 Query: 416 gccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagctgttggg 475 |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| Sbjct: 1334 gccgttggcctggtagtaggcgttcatcacgtacgacgcatgggcctgcaggctgttggg 1275 Query: 476 gctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcaggcgtagtt 535 ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 1274 gctgaagcacgcgccgccgctctgtatgggcttgcagtctacgaagccgcaggcgtag-t 1216 Query: 536 tgatgttgttctgcaggtcc 555 |||||||||||||||||||| Sbjct: 1215 tgatgttgttctgcaggtcc 1196
>gb|BT018818.1| Zea mays clone EL01N0532A09.d mRNA sequence Length = 1682 Score = 121 bits (61), Expect = 3e-24 Identities = 170/205 (82%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 350 cccgtaactggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtc 409 ||||||||||||||| ||||| ||||| ||||||||||||||||||||||| | |||| Sbjct: 1278 cccgtaactggggtcactggaggtgaccacgccggtgcccttgaagtcgcagtcatagtc 1219 Query: 410 ggtgtggccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagct 469 | ||| |||||||||||||| |||||||| |||||||| ||||| || || | | | Sbjct: 1218 gtgcatgccattggcctggtagtacgcgttcatgacgtacgaggcatgtgagtggatgtt 1159 Query: 470 gttggggctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcaggc 529 ||||||| ||||| |||||||||||||| |||| | | ||||| ||| || | ||||| Sbjct: 1158 gttggggtccaagcacgcgccgccgctctggatcggcctacagtcgacgtaggcacaggc 1099 Query: 530 gtagtttgatgttgttctgcaggtc 554 |||| || ||||||||||||||||| Sbjct: 1098 gtag-ttaatgttgttctgcaggtc 1075 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Minus Query: 167 aagaagcatggctgtcagacacgagtatagaagaacatggcgcaagcccggc 218 ||||||||||| ||| ||||| ||||||| ||| | ||||||||||||||| Sbjct: 1470 aagaagcatgggtgtgagacatgagtatacaagtatgtggcgcaagcccggc 1419
>gb|AY105098.1| Zea mays PCO087970 mRNA sequence Length = 926 Score = 105 bits (53), Expect = 2e-19 Identities = 168/205 (81%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 350 cccgtaactggggtcgctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtc 409 ||||||||||||||| ||||| ||||| || |||||||||||||||||||| | |||| Sbjct: 537 cccgtaactggggtcactggaggtgaccacaccggtgcccttgaagtcgcagtcatagtc 478 Query: 410 ggtgtggccgttggcctggtagtaggcgttcatcacgtacgacgcatgagactgcaagct 469 | ||| |||||||||||||| |||||||| |||||||| ||||| || || | | | Sbjct: 477 gtgcatgccattggcctggtagtacgcgttcatgacgtacgaggcatgtgagtggatgtt 418 Query: 470 gttggggctgaagcaggcgccgccgctctgtatcgccttgcagtctacgaagccgcaggc 529 ||||||| ||||| |||||||||||||| |||| | | ||||| ||| || | ||||| Sbjct: 417 gttggggtccaagcacgcgccgccgctctggatcggcctacagtcgacgtaggcacaggc 358 Query: 530 gtagtttgatgttgttctgcaggtc 554 |||| || ||||| ||||||||||| Sbjct: 357 gtag-ttaatgttattctgcaggtc 334 Score = 40.1 bits (20), Expect = 7.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 167 aagaagcatggctgtcagacacgagtatagaagaacatggcgcaagcccggc 218 ||||| ||||| ||| ||||| ||||||| ||| | ||||||||||||||| Sbjct: 730 aagaaacatgggtgtgagacatgagtatacaagtatgtggcgcaagcccggc 679
>dbj|AK102883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112J01, full insert sequence Length = 1876 Score = 89.7 bits (45), Expect = 9e-15 Identities = 117/141 (82%) Strand = Plus / Minus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 364 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || ||||| Sbjct: 1592 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1533 Query: 365 gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 424 |||| ||||| |||||||||||||||||||||| | ||||| | |||||||| Sbjct: 1532 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1473 Query: 425 ctggtagtaggcgttcatcac 445 ||||||| |||| |||||||| Sbjct: 1472 ctggtagaaggcattcatcac 1452
>dbj|AK100931.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135K21, full insert sequence Length = 1663 Score = 89.7 bits (45), Expect = 9e-15 Identities = 117/141 (82%) Strand = Plus / Minus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 364 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || ||||| Sbjct: 1348 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1289 Query: 365 gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 424 |||| ||||| |||||||||||||||||||||| | ||||| | |||||||| Sbjct: 1288 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1229 Query: 425 ctggtagtaggcgttcatcac 445 ||||||| |||| |||||||| Sbjct: 1228 ctggtagaaggcattcatcac 1208
>dbj|AK059271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B11, full insert sequence Length = 1704 Score = 89.7 bits (45), Expect = 9e-15 Identities = 117/141 (82%) Strand = Plus / Minus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgtaactggggtc 364 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| || ||||| Sbjct: 1475 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgtagctagggtc 1416 Query: 365 gctggacgtgacgacgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggc 424 |||| ||||| |||||||||||||||||||||| | ||||| | |||||||| Sbjct: 1415 attggaggtgaccgcgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggc 1356 Query: 425 ctggtagtaggcgttcatcac 445 ||||||| |||| |||||||| Sbjct: 1355 ctggtagaaggcattcatcac 1335
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 355 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| Sbjct: 13187 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 13237 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 379 cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 438 |||||||||||||||||||||| | ||||| | ||||||||||||||| |||| | Sbjct: 13422 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 13481 Query: 439 tcatcac 445 ||||||| Sbjct: 13482 tcatcac 13488
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 355 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| Sbjct: 166622 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 166672 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 379 cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 438 |||||||||||||||||||||| | ||||| | ||||||||||||||| |||| | Sbjct: 166857 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 166916 Query: 439 tcatcac 445 ||||||| Sbjct: 166917 tcatcac 166923
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 355 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| Sbjct: 28208086 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 28208136 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 379 cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 438 |||||||||||||||||||||| | ||||| | ||||||||||||||| |||| | Sbjct: 28208321 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 28208380 Query: 439 tcatcac 445 ||||||| Sbjct: 28208381 tcatcac 28208387
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 305 actgccgtagcttgctgcgtaccgtcaggagacgtacttgcaacccccgta 355 |||||| | ||||||||||| ||||||||||||||| ||||| | |||||| Sbjct: 28192964 actgccatggcttgctgcgtcccgtcaggagacgtatttgcagctcccgta 28193014 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 379 cgccggtgcccttgaagtcgcacgccgagtcggtgtggccgttggcctggtagtaggcgt 438 |||||||||||||||||||||| | ||||| | ||||||||||||||| |||| | Sbjct: 28193199 cgccggtgcccttgaagtcgcaatcgtagtcgtgccgcccgttggcctggtagaaggcat 28193258 Query: 439 tcatcac 445 ||||||| Sbjct: 28193259 tcatcac 28193265
>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence Length = 173268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 tttatgactagaaaggaagaa 168 ||||||||||||||||||||| Sbjct: 126236 tttatgactagaaaggaagaa 126256
>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic acid oxidase, a novel gene (LOC327969), the 5' end of the Sez6 gene for seizure related gene 6 and two CpG islands, complete sequence Length = 220176 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttattgtattttctacatgaa 23 ||||||||||||||||||||| Sbjct: 160625 ttattgtattttctacatgaa 160645
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggcctggtagtaggcgttcat 442 ||||||||||||||||||||| Sbjct: 111901 ggcctggtagtaggcgttcat 111921
>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence Length = 181627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggcctggtagtaggcgttcat 442 ||||||||||||||||||||| Sbjct: 145941 ggcctggtagtaggcgttcat 145961
>emb|BX321877.7| Zebrafish DNA sequence from clone DKEYP-27B10 in linkage group 18, complete sequence Length = 127643 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 attgatatttatatttatgac 155 ||||||||||||||||||||| Sbjct: 86122 attgatatttatatttatgac 86102
>emb|AL132711.5|CNS01DTC Human chromosome 14 DNA sequence BAC R-566J3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185799 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 461 ctgcaagctgttggggctgaagcaggcgccgcc 493 |||||||||| ||| ||||||||||| |||||| Sbjct: 4788 ctgcaagctgctggagctgaagcaggagccgcc 4756
>dbj|AP005240.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-14P20, complete sequence Length = 98739 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 aagctaagaggcgatgattgatatt 143 |||||||||||| |||||||||||| Sbjct: 10309 aagctaagaggcaatgattgatatt 10333
>emb|AL163974.7|CNS05TBT Human chromosome 14 DNA sequence Partial sequence from BAC C-2644I21 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 73471 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 461 ctgcaagctgttggggctgaagcaggcgccgcc 493 |||||||||| ||| ||||||||||| |||||| Sbjct: 64323 ctgcaagctgctggagctgaagcaggagccgcc 64355
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ggcctggtagtaggcgttca 441 |||||||||||||||||||| Sbjct: 3094774 ggcctggtagtaggcgttca 3094755
>gb|AY596296.1| Haloarcula marismortui ATCC 43049 plasmid pNG700, complete sequence Length = 410554 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ccgtcgctgccgccaccgcggctc 257 ||||||||||||||||||| |||| Sbjct: 354930 ccgtcgctgccgccaccgccgctc 354953
>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 ttgtattttctacatgaaatgaca 29 |||| ||||||||||||||||||| Sbjct: 24665 ttgtgttttctacatgaaatgaca 24642
>gb|AY238342.1| Rattus norvegicus erythroid spectrin alpha mRNA, complete cds Length = 7842 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aggaagaagaagcatggctg 180 |||||||||||||||||||| Sbjct: 5663 aggaagaagaagcatggctg 5682
>ref|XM_752307.1| Ustilago maydis 521 hypothetical protein (UM01253.1) partial mRNA Length = 3597 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gatggagatggtagtgggct 280 |||||||||||||||||||| Sbjct: 1706 gatggagatggtagtgggct 1687
>gb|AC124441.5| Mus musculus BAC clone RP24-176L17 from chromosome 18, complete sequence Length = 190119 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tattgtattttctacatgaa 23 |||||||||||||||||||| Sbjct: 122788 tattgtattttctacatgaa 122769
>gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosome 3, complete sequence Length = 162777 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gatatttatatttatgacta 157 |||||||||||||||||||| Sbjct: 87344 gatatttatatttatgacta 87363
>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence Length = 97982 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aagagaacgaaaaataaatt 63 |||||||||||||||||||| Sbjct: 46340 aagagaacgaaaaataaatt 46321
>emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chromosome 13 Contains the 3' end of the PCDH17 gene for protocadherin 17 (PCH68 PCDH68), complete sequence Length = 99292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 atgattgatatttatattta 151 |||||||||||||||||||| Sbjct: 60169 atgattgatatttatattta 60188
>emb|AL138902.22| Human DNA sequence from clone RP4-800M6 on chromosome 1 Contains the 5' end of a novel gene, the 5' end of the gene for sister-of-mammalian grainyhead (SOM), complete sequence Length = 42322 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ttctacatgaaatgacaatg 32 |||||||||||||||||||| Sbjct: 15468 ttctacatgaaatgacaatg 15449
>gb|AC092943.5| Homo sapiens 3 BAC RP11-564C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89885 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 acatgaaatgacaatgacaa 36 |||||||||||||||||||| Sbjct: 52368 acatgaaatgacaatgacaa 52387
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 caagctgttggggctgaagc 483 |||||||||||||||||||| Sbjct: 141973 caagctgttggggctgaagc 141954
>dbj|AB228383.1| Aspergillus oryzae cDNA, contig sequence: AoEST5256 Length = 449 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgcaagcccggcagtatcag 226 |||||||||||||||||||| Sbjct: 395 cgcaagcccggcagtatcag 414
>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190858 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gactagaaaggaagaagaag 172 |||||||||||||||||||| Sbjct: 110319 gactagaaaggaagaagaag 110338
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 cccttgaagtcgcacgccga 406 |||||||||||||||||||| Sbjct: 195036 cccttgaagtcgcacgccga 195017
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgcaagcccggcagtatcag 226 |||||||||||||||||||| Sbjct: 3502192 cgcaagcccggcagtatcag 3502211
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aagaggcgatgattgatatt 143 |||||||||||||||||||| Sbjct: 1542019 aagaggcgatgattgatatt 1542000
>gb|AF155773.3| Gibberella moniliformis fumonisin biosynthetic gene cluster, complete sequence Length = 75658 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 atgaaatgacaatgacaacc 38 |||||||||||||||||||| Sbjct: 74464 atgaaatgacaatgacaacc 74445
>gb|DQ350725.1| Ajellomyces capsulatus nitrosative stress induced transcription 71 (NIT71) gene, partial sequence Length = 1402 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gacgtacttgcaacccccgt 354 |||||||||||||||||||| Sbjct: 444 gacgtacttgcaacccccgt 425
>gb|AC079414.6| Homo sapiens chromosome 16 clone RP11-358L22, complete sequence Length = 167015 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tacatgaaatgacaatgaca 35 |||||||||||||||||||| Sbjct: 11490 tacatgaaatgacaatgaca 11471
>gb|AC005991.1| Aspergillus parasiticus clone ap0, complete sequence Length = 37754 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cccttgaagtcgcacgccga 406 |||||||||||||||||||| Sbjct: 15737 cccttgaagtcgcacgccga 15756
>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence Length = 252650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 attgatatttatatttatga 154 |||||||||||||||||||| Sbjct: 135002 attgatatttatatttatga 135021
>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19, complete sequence Length = 180994 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tttattgtattttctacatg 21 |||||||||||||||||||| Sbjct: 127180 tttattgtattttctacatg 127161
>gb|AC009044.3|AC009044 Homo sapiens chromosome 16 clone RP11-190D6, complete sequence Length = 167195 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tacatgaaatgacaatgaca 35 |||||||||||||||||||| Sbjct: 93380 tacatgaaatgacaatgaca 93361
>ref|NM_001011908.1| Rattus norvegicus spectrin alpha 1 (Spna1), mRNA Length = 7842 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 aggaagaagaagcatggctg 180 |||||||||||||||||||| Sbjct: 5663 aggaagaagaagcatggctg 5682
>emb|Z77656.1|CEF07B10 Caenorhabditis elegans Cosmid F07B10, complete sequence Length = 17602 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aacgaaaaataaattaatgc 68 |||||||||||||||||||| Sbjct: 897 aacgaaaaataaattaatgc 878
>emb|Z74043.1|CET19B10 Caenorhabditis elegans Cosmid T19B10, complete sequence Length = 35888 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aacgaaaaataaattaatgc 68 |||||||||||||||||||| Sbjct: 34824 aacgaaaaataaattaatgc 34805
>emb|AL365324.12| Mouse DNA sequence from clone RP23-451H2 on chromosome 1, complete sequence Length = 25203 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 ttgtattttctacatgaaatgaca 29 |||| ||||||||||||||||||| Sbjct: 14782 ttgtgttttctacatgaaatgaca 14805 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,016,665 Number of Sequences: 3902068 Number of extensions: 5016665 Number of successful extensions: 125483 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125167 Number of HSP's gapped (non-prelim): 314 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
