>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 37.0 bits (84), Expect = 0.050
 Identities = 22/68 (32%), Positives = 25/68 (36%)
 Frame = -2

Query: 484 PPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQPPVYFGQPDLSMGSSGTTVYPQW 305
           P  PDYG  PG                  +P  P  QPP Y+  P+     S     P W
Sbjct: 695 PTQPDYGAPPG----------------WHAPGWPPQQPPDYWYPPEQQPSQS-----PYW 733

Query: 304 PTPAMMYP 281
           P PA  YP
Sbjct: 734 PQPAPSYP 741

>I12R1_HUMAN (P42701) Interleukin-12 receptor beta-1 chain precursor|
           (IL-12R-beta1) (Interleukin-12 receptor beta) (IL-12
           receptor beta component) (IL-12RB1) (CD212 antigen)
          Length = 662

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -2

Query: 463 VSPGAFNFAVPQFMQYGVGYMQSPSMPRNQ--PPVYFGQPDLSMGSSGTTVYPQWPTPAM 290
           +S  A+N AV    Q+G G  Q+  +P +    PV     ++S+G++GTT+Y  WP  A 
Sbjct: 309 LSGAAYNVAVISSNQFGPGLNQTWHIPADTHTEPVAL---NISVGTNGTTMY--WPARAQ 363

Query: 289 MYPHCYD 269
              +C +
Sbjct: 364 SMTYCIE 370

>YAJE_SCHPO (Q09911) Hypothetical protein C30D11.14c in chromosome I|
          Length = 534

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
 Frame = -2

Query: 598 DENKGC-TFNSRSRVAVF--KDAEKDRSDPDYDRNYKRYVRP--PVPDYGVSPGAFNFAV 434
           D+N+G   +N  +R   F  +D+ ++++ P  + +    V P  PVP     PG    A+
Sbjct: 391 DQNQGNRAYNPPNRNQAFSARDSRQEKTQPT-NASPAPLVTPSLPVPSIPAVPGMEAMAM 449

Query: 433 PQFMQYGVGYMQSPSMPRNQPPVYFGQPDLSMGSSGTTVYPQWPTPAMMYP 281
           P  +   +    + SMP    P  FG P +S  + GT   P   TP +  P
Sbjct: 450 PPGVTSSIAVPTTSSMPLQGMPTMFGAPGVS--APGTEA-PGTGTPGLTTP 497

>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher) (Protein oracle)
          Length = 723

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
 Frame = -2

Query: 529 RSDPDYDRNYKRYVRPPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQPPVYFGQP 350
           + DP  D N       P P+   SPGA  F       +    + SP M  + P +  G P
Sbjct: 106 QKDPALDTNGSLATPSPSPEARASPGALEFGDTFSSSFSQTSVCSPLMEASGPVLPLGSP 165

Query: 349 DLSMGSSGT--TVYPQWPTPAMMYPHCYDN 266
                S G   +V P+   P    P  Y+N
Sbjct: 166 VAKASSEGAQGSVSPK-VLPGPSQPRQYNN 194

>FP1_MYTCO (Q25434) Adhesive plaque matrix protein precursor (Foot protein 1)|
            (MCFP1)
          Length = 872

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
 Frame = -2

Query: 520  PDYDRNYKRYVRPPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQ------PPVYF 359
            P Y  +YK  +R P P Y   P   +   P+ ++Y   Y   PS   +       PP Y 
Sbjct: 756  PSYASSYKPKIRYP-PTYKPKPSYASSYKPK-IRYPPTYKPKPSYASSYKPKIRYPPTYK 813

Query: 358  GQPDLSMGSSGTTVYPQWPTPAMMYPHCY 272
             +P  +        YP    P + YP  Y
Sbjct: 814  PKPSYASSYKPKITYPPTYKPKISYPPTY 842

>KCD13_MOUSE (Q8BGV7) Potassium channel tetramerisation domain-containing|
           protein 13 (Polymerase delta-interacting protein 1)
          Length = 329

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/20 (70%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +1

Query: 25  TSAPVCRLVHN-NNNKYSYT 81
           TS PV +L+HN +NNKYSYT
Sbjct: 166 TSKPVVKLLHNRSNNKYSYT 185

>KCD13_HUMAN (Q8WZ19) Potassium channel tetramerization domain-containing|
           protein 13 (Polymerase delta-interacting protein 1)
           (TNFAIP1-like protein)
          Length = 329

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/20 (70%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +1

Query: 25  TSAPVCRLVHN-NNNKYSYT 81
           TS PV +L+HN +NNKYSYT
Sbjct: 166 TSKPVVKLLHNRSNNKYSYT 185

>GRA4_TOXGO (Q27002) Dense granule protein 4 precursor (Protein GRA 4) (Antigen|
           H11)
          Length = 345

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 475 PDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQPPVYFGQP 350
           P   V+PG     + Q  QYG  Y  + S P   PP  +G P
Sbjct: 172 PGAEVTPGYSGLQLRQQSQYGYSYPGTTSTPTPPPPASYGYP 213

>YN18_YEAST (P53836) Hypothetical 118.3 kDa protein in ERG24-MET2 intergenic|
            region
          Length = 1060

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = -2

Query: 460  SPGAFNFAVPQFMQYGVGYMQSPSMP---RNQPPVYF-GQPDLSMGSSGTTVYPQWPTPA 293
            SPG +  A P F    V Y   P  P    N P  ++   P+L+   +G+  Y + P P 
Sbjct: 972  SPGGYAGAAPPFQPANVNYNTRPQQPWPTPNSPSAHYRPPPNLNQPQNGSAGYYRPPAPQ 1031

Query: 292  M 290
            +
Sbjct: 1032 L 1032

>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1887

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -2

Query: 484  PPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQP--PVYFGQPDLSMGSSGTTVY 314
            P  P+Y  SP  ++ A P + Q GV Y  SP+ P   P  P Y G P     + G+  Y
Sbjct: 1729 PTSPNYSASP-QYSPASPAYSQTGVKY--SPTSPTYSPPSPSYDGSPGSPQYTPGSPQY 1784

>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein) (Responsive to centrifugal force and
           shear stress gene 1 protein)
          Length = 309

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 397 SPSMPRNQPPVYFGQPDLSMGSSGTTVYPQWPTPAMMYPHCY 272
           +P  P + PP  +GQP +  G  G   YP +P P   +P  Y
Sbjct: 14  NPLYPGSPPPGGYGQPSVLPG--GYPAYPAYPQPGYGHPAGY 53

>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 15/83 (18%)
 Frame = -2

Query: 484 PPVPDYGVSPG-AFNFAVPQF--------MQYGVGYMQSPSMPRNQPPVYFGQPDLSMGS 332
           PP  DYG  PG  +N+  P +          YG GY      P   PP  +  P     S
Sbjct: 269 PPYDDYGYPPGDPYNYYHPDYYGDTLYPGYAYGYGYGYDDFEPPYAPPSGYSSPYSYHDS 328

Query: 331 SGTTVYP------QWPTPAMMYP 281
             +  YP       + T  M YP
Sbjct: 329 FESEAYPYSYYLDPYATHHMPYP 351

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 25/68 (36%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
 Frame = -2

Query: 487 RPPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPRNQP----PVYFGQPDLSMGSSGTT 320
           R P P YG  P    F+ P   Q     + SP  P  QP    P Y GQP     S  TT
Sbjct: 555 RTPTPTYGQPPSPPTFSAPPPRQ-----IHSPPPPHRQPRPPTPTY-GQPP----SPPTT 604

Query: 319 VYPQWPTP 296
             P  P P
Sbjct: 605 YSPPSPPP 612

>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50) (56 kDa autoantigen)
          Length = 505

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
 Frame = -2

Query: 481 PVPDYGVSP---GAFNFAVPQFMQYGVGYMQSPSMPR--NQPP-VYFGQPDLSMGSSGTT 320
           PVP YG+ P   G     +P +  Y    +    MP    QPP  Y GQP ++       
Sbjct: 99  PVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPV 158

Query: 319 VYPQWPTPAMMYPHCYDNLGHVISQVPVYQSFNHG 215
             P    P   YP  Y   G V   VP  Q  + G
Sbjct: 159 PLPGQQQPVPSYPG-YPGSGTVTPAVPPTQFGSRG 192

>SMR3A_HUMAN (Q99954) Submaxillary gland androgen-regulated protein 3 homolog A|
           precursor (Proline-rich protein 5) (Proline-rich protein
           PBI)
          Length = 134

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 484 PPVPDYGVSPGAF-NFAVPQFMQYGVGYMQSPSMPRNQPP 368
           PP P     PG   + ++P    YG GY Q PS PR  PP
Sbjct: 77  PPSPPPPYGPGRIQSHSLPP--PYGPGYPQPPSQPRPYPP 114

>FP1_MYTGA (Q27409) Adhesive plaque matrix protein precursor (Foot protein 1)|
           (MGFP1) (MGFP-1)
          Length = 751

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 6/92 (6%)
 Frame = -2

Query: 529 RSDPDYDRNYKRYVRPPVPDYGVSPGAFNFAVPQFMQYGVGYMQSPSMPR------NQPP 368
           R+ P Y   YK     P P Y   P ++         Y   Y   PS P       + PP
Sbjct: 280 RAKPSYPSTYKAKPSYP-PTYKAKP-SYPPTYKAKPTYPSTYKAKPSYPPTYKAKPSYPP 337

Query: 367 VYFGQPDLSMGSSGTTVYPQWPTPAMMYPHCY 272
            Y  +P         T YP    P + YP  Y
Sbjct: 338 TYKAKPSYPPSYKPKTTYPPSYKPKISYPPTY 369

>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein homolog)
          Length = 311

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -2

Query: 400 QSPSMPRNQPPVYFGQPDLSMGSSGTTVYPQWPTPAMMYPHCYDNLGHVISQVPVYQSFN 221
           ++P  P   PP  +GQP +  G  G   YP +P P   +P  Y         +P+     
Sbjct: 13  RNPLYPGPPPPGGYGQPSVLPG--GYPAYPGYPQPGYGHPAGYPQPMPPTHPMPMNYGPG 70

Query: 220 HG 215
           HG
Sbjct: 71  HG 72

>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
            transduction protein Xp95)
          Length = 867

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
 Frame = -2

Query: 541  AEKDRSDPDYDRNYKRYVRPPVPDYGVSPGAFNFAVP-QFMQYGVG------YMQSPSMP 383
            A  D S P  +    +   PP P Y   PG +   +P  +  Y  G      YM  P  P
Sbjct: 786  AAADSSQPPSNTIPSQAQGPPYPSYPGYPGYYGMPMPVGYNPYMYGQQTIPPYMYQP--P 843

Query: 382  RNQPPVYFGQPDLSMGSSGTTVYPQWP 302
              QPP    QP  S        YPQ P
Sbjct: 844  SGQPPYPAQQPSFS--------YPQQP 862

>GCR_TUPGB (Q95267) Glucocorticoid receptor (GR)|
          Length = 776

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 130 WSQFFPIIELLDSVS*VYKNIY-YCYCALIYKQGRSSFTRLL 8
           W +F+ + +LLDS+  V +N+  YC+   + K  R  F  +L
Sbjct: 711 WQRFYQLTKLLDSMHDVVENLLNYCFQTFLDKTMRIEFPEML 752


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,218,634
Number of Sequences: 219361
Number of extensions: 2001059
Number of successful extensions: 4435
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4424
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)