Clone Information

BLAST Search Result

Clone Name	rbasd22k14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK101609.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	355	1e-94
2	gb\|AY224459.1\| Oryza sativa (japonica cultivar-group) isolate 23...	349	7e-93
3	gb\|AY596557.1\| Saccharum officinarum clone SCCCCL3120B05, comple...	268	2e-68
4	gb\|BT017305.1\| Zea mays clone EL01N0316E09.c mRNA sequence	246	8e-62
5	gb\|AY103781.1\| Zea mays PCO113646 mRNA sequence	246	8e-62
6	gb\|AC130729.3\| Oryza sativa (japonica cultivar-group) chromosome...	198	2e-47
7	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	198	2e-47
8	gb\|BT018581.1\| Zea mays clone EL01N0446A04.d mRNA sequence	125	2e-25
9	emb\|AL772228.5\| Mouse DNA sequence from clone RP23-236D1 on chro...	50	0.009
10	emb\|CR627496.8\| Zebrafish DNA sequence from clone DKEY-223G10 in...	46	0.14
11	ref\|XM_393332.2\| PREDICTED: Apis mellifera similar to GH03617p (...	46	0.14
12	gb\|AC011364.4\| Homo sapiens chromosome 5 clone CTC-529P8, comple...	44	0.56
13	gb\|AC122399.4\| Mus musculus BAC clone RP24-92B2 from chromosome ...	42	2.2
14	emb\|CR932438.14\| Zebrafish DNA sequence from clone DKEY-250O4 in...	42	2.2
15	emb\|BX901973.12\| Zebrafish DNA sequence from clone DKEY-26L17 in...	42	2.2
16	gb\|AC126007.16\| Medicago truncatula clone mth2-11o4, complete se...	42	2.2
17	emb\|AL606831.17\| Mouse DNA sequence from clone RP23-432M23 on ch...	42	2.2
18	emb\|AL807378.5\| Zebrafish DNA sequence from clone CH211-215A18 i...	42	2.2
19	emb\|BX927129.10\| Zebrafish DNA sequence from clone DKEY-158N21 i...	42	2.2
20	gb\|AC006300.4\| Arabidopsis thaliana chromosome 2 clone F13B15 ma...	42	2.2
21	gb\|AC096543.2\| Homo sapiens chromosome 1 clone RP11-335E6, compl...	42	2.2
22	emb\|AL935282.14\| Zebrafish DNA sequence from clone CH211-281O21 ...	42	2.2
23	gb\|AC153383.1\| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cance...	40	8.7
24	gb\|AC005687.1\| Arabidopsis thaliana BAC F1I21 from chromosome 1,...	40	8.7
25	gb\|AC102205.8\| Mus musculus chromosome 7, clone RP24-194L15, com...	40	8.7
26	gb\|AC167724.6\| Mus musculus 10 BAC RP23-331P17 (Roswell Park Can...	40	8.7
27	gb\|AC161440.8\| Mus musculus chromosome 7, clone RP23-309B10, com...	40	8.7
28	gb\|AC134546.4\| Mus musculus BAC clone RP24-471H17 from chromosom...	40	8.7
29	gb\|AC116979.3\| Dictyostelium discoideum chromosome 2 map 6445720...	40	8.7
30	ref\|XM_391681.1\| Gibberella zeae PH-1 chromosome linkage group 1...	40	8.7
31	gb\|AE014306.1\| Homo sapiens chromosome 13q34 schizophrenia regio...	40	8.7
32	emb\|AL445226.9\| Human DNA sequence from clone RP11-261F2 on chro...	40	8.7
33	emb\|AL354810.8\| Human DNA sequence from clone RP11-527N12 on chr...	40	8.7
34	gb\|AC023684.4\| Drosophila melanogaster X BAC RP98-7P13 (Roswell ...	40	8.7
35	emb\|BX470121.7\| Zebrafish DNA sequence from clone DKEY-267G17 in...	40	8.7
36	emb\|AL844157.5\| Mouse DNA sequence from clone RP24-313C24 on chr...	40	8.7
37	gb\|AC090160.6\| Homo sapiens chromosome 11, clone RP11-413N10, co...	40	8.7
38	emb\|BX323842.8\| Zebrafish DNA sequence from clone CH211-1M7, com...	40	8.7
39	gb\|AC023740.4\| Drosophila melanogaster X BAC RP98-27J18 (Roswell...	40	8.7
40	gb\|AC100875.3\| Homo sapiens chromosome 11, clone RP11-715M10, co...	40	8.7
41	ref\|XM_943260.1\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
42	ref\|XM_943258.1\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
43	ref\|XM_937323.1\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
44	ref\|XM_931724.1\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
45	ref\|XM_931718.1\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
46	ref\|XM_166227.6\| PREDICTED: Homo sapiens macrophage expressed ge...	40	8.7
47	ref\|XM_937661.1\| PREDICTED: Homo sapiens deltex 4 homolog (Droso...	40	8.7
48	ref\|XM_166213.6\| PREDICTED: Homo sapiens deltex 4 homolog (Droso...	40	8.7
49	gb\|AC068303.10\| Homo sapiens 3 BAC RP11-324H4 (Roswell Park Canc...	40	8.7
50	gb\|AC007434.8\| Homo sapiens, clone RP11-17A8, complete sequence	40	8.7
51	ref\|XM_626912.1\| Cryptosporidium parvum Iowa II hypothetical pro...	40	8.7
52	gb\|AC021889.29\| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc...	40	8.7
53	gb\|AC155909.9\| Mus musculus 10 BAC RP24-477D23 (Roswell Park Can...	40	8.7
54	emb\|BX682533.6\| Mouse DNA sequence from clone RP23-108L1 on chro...	40	8.7
55	gb\|AC150625.3\| Atelerix albiventris clone LB4-57B20, complete se...	40	8.7
56	gb\|CP000033.1\| Lactobacillus acidophilus NCFM, complete genome	40	8.7
57	emb\|CR388173.7\| Zebrafish DNA sequence from clone DKEYP-109D11 i...	40	8.7
58	emb\|CR352301.7\| Zebrafish DNA sequence from clone CH211-147A11 i...	40	8.7
59	emb\|BX571830.6\| Zebrafish DNA sequence from clone DKEY-261I16 in...	40	8.7
60	emb\|CR376851.5\| Zebrafish DNA sequence from clone DKEY-48N5 in l...	40	8.7
61	emb\|BX005306.20\| Zebrafish DNA sequence from clone DKEY-78C7 in ...	40	8.7
62	emb\|BX248111.7\| Zebrafish DNA sequence from clone DKEY-22L11 in ...	40	8.7
63	gb\|AE003434.4\| Drosophila melanogaster chromosome X, section 18 ...	40	8.7
64	dbj\|AP001148.4\| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	8.7
65	emb\|AL670035.15\| Mouse DNA sequence from clone RP23-295C20 on ch...	40	8.7
66	emb\|AJ297131.1\|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & C...	40	8.7
67	dbj\|AP002358.3\| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	8.7
68	dbj\|AB023154.1\| Homo sapiens mRNA for KIAA0937 protein, partial cds	40	8.7
69	emb\|AL731651.1\| Mouse DNA sequence from clone XX-PAC129 on chrom...	40	8.7

>dbj|AK101609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B11, full
            insert sequence
          Length = 1339

 Score =  355 bits (179), Expect = 1e-94
 Identities = 364/425 (85%), Gaps = 3/425 (0%)
 Strand = Plus / Minus

                                                                        
Query: 195  ccaggaagtagcatctcctagccatggttgaaggactggtacaccggaacctgagaaatc 254
            |||| |||||| |||||  |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1186 ccagcaagtaggatctctcagccatggttgaaggactggtaaaccggaacctgagaaatc 1127

                                                                        
Query: 255  acatggccaagattgtcgtagcaatggggatacatcattgctggggtaggccattgtggg 314
            | ||| ||||||||||| ||||||||||| || ||||||||||| || ||||| ||||||
Sbjct: 1126 atatgcccaagattgtcatagcaatgggggtatatcattgctggagttggccactgtggg 1067

                                                                        
Query: 315  taaacagtagttccagaa---gaccccatcgataaatcaggttgaccaaagtacacagga 371
            || |||| ||||||||||   || ||||| |||||||| ||||| ||||||||||||| |
Sbjct: 1066 tagacagcagttccagaagaggagcccatagataaatcgggttggccaaagtacacagaa 1007

                                                                        
Query: 372  ggttggtttctcggcatgctaggagactgcatataaccgacaccatactgcataaactga 431
            ||||||||||| | |||  ||| |||||||||| |||| |||||||||||||||||||| 
Sbjct: 1006 ggttggtttcttgacatattagcagactgcataaaaccaacaccatactgcataaactgt 947

                                                                        
Query: 432  ggcacagcaaaattgaaggcgcctgggctcacaccataatcaggcacggggggcctaaca 491
            |||||| ||||||||||| | || || ||||||    | ||  |||| |||  |||||||
Sbjct: 946  ggcacaacaaaattgaagccaccaggactcacattgaagtcgtgcactgggcccctaaca 887

                                                                        
Query: 492  taccttttgtagttacgatcgtagtcaggatcactacgatctttttcagcgtccttaaaa 551
            ||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 886  tacctcttgtagttacgatcatagtcaggatcactacgatccttttcagtgtccttaaaa 827

                                                                        
Query: 552  acagcaaccctggaacggctattgaacgtgcagcccttgttctcatcaacagaaggctca 611
            |||||||| ||||||||||| || |  |||    |||| ||||||||||||| |||||||
Sbjct: 826  acagcaactctggaacggctgttcattgtgttcaccttattctcatcaacaggaggctca 767

                 
Query: 612  acatt 616
            |||||
Sbjct: 766  acatt 762

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>gb|AY224459.1| Oryza sativa (japonica cultivar-group) isolate 23495 unknown mRNA
          Length = 1008

 Score =  349 bits (176), Expect = 7e-93
 Identities = 349/406 (85%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 214  agccatggttgaaggactggtacaccggaacctgagaaatcacatggccaagattgtcgt 273
            |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |
Sbjct: 1006 agccatggttgaaggactggtaaaccggaacctgagaaatcatatgcccaagattgtcat 947

                                                                        
Query: 274  agcaatggggatacatcattgctggggtaggccattgtgggtaaacagtagttccagaa- 332
            |||||||||| || ||||||||||| || ||||| |||||||| |||| |||||||||| 
Sbjct: 946  agcaatgggggtatatcattgctggagttggccactgtgggtagacagcagttccagaag 887

                                                                        
Query: 333  --gaccccatcgataaatcaggttgaccaaagtacacaggaggttggtttctcggcatgc 390
              || ||||| |||||||| ||||| ||||||||||||| |||||||||||| | |||  
Sbjct: 886  aggagcccatagataaatcgggttggccaaagtacacagaaggttggtttcttgacatat 827

                                                                        
Query: 391  taggagactgcatataaccgacaccatactgcataaactgaggcacagcaaaattgaagg 450
            ||| |||||||||| |||| |||||||||||||||||||| |||||| ||||||||||| 
Sbjct: 826  tagcagactgcataaaaccaacaccatactgcataaactgtggcacaacaaaattgaagc 767

                                                                        
Query: 451  cgcctgggctcacaccataatcaggcacggggggcctaacataccttttgtagttacgat 510
            | || || ||||||    | ||  |||| |||  |||||||||||| |||||||||||||
Sbjct: 766  caccaggactcacattgaagtcgtgcactgggcccctaacatacctcttgtagttacgat 707

                                                                        
Query: 511  cgtagtcaggatcactacgatctttttcagcgtccttaaaaacagcaaccctggaacggc 570
            | |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||
Sbjct: 706  catagtcaggatcactacgatccttttcagtgtccttaaaaacagcaactctggaacggc 647

                                                          
Query: 571  tattgaacgtgcagcccttgttctcatcaacagaaggctcaacatt 616
            | || |  |||    |||| ||||||||||||| ||||||||||||
Sbjct: 646  tgttcattgtgttcaccttattctcatcaacaggaggctcaacatt 601

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>gb|AY596557.1| Saccharum officinarum clone SCCCCL3120B05, complete sequence
          Length = 1460

 Score =  268 bits (135), Expect = 2e-68
 Identities = 341/409 (83%), Gaps = 3/409 (0%)
 Strand = Plus / Minus

                                                                        
Query: 211  cctagccatggttgaaggactggtacaccggaacctgagaaatcacatggccaagattgt 270
            |||| ||||||||||| || |||||||  ||||||||||| ||||   | |||| ||| |
Sbjct: 1237 cctaaccatggttgaaagattggtacagaggaacctgagagatcattggaccaacattat 1178

                                                                        
Query: 271  cgtagcaatggggatacatcattgctggggtaggccattgtgggtaaacagtagttccag 330
            | |||||||||||||||||||||||||| || ||||| ||||||||||||| || |||||
Sbjct: 1177 catagcaatggggatacatcattgctggcgttggccaatgtgggtaaacagcagctccag 1118

                                                                        
Query: 331  aaga---ccccatcgataaatcaggttgaccaaagtacacaggaggttggtttctcggca 387
            ||||   |||||| | || |||||| || ||||||||||||| ||| ||||||   | ||
Sbjct: 1117 aagaagaccccattgctagatcaggctggccaaagtacacagtaggctggtttgaggaca 1058

                                                                        
Query: 388  tgctaggagactgcatataaccgacaccatactgcataaactgaggcacagcaaaattga 447
            ||| |||||| |||| |||||| || || ||||||||||||||||||||| |||| ||||
Sbjct: 1057 tgccaggagattgcacataaccaacgccgtactgcataaactgaggcacaacaaagttga 998

                                                                        
Query: 448  aggcgcctgggctcacaccataatcaggcacggggggcctaacataccttttgtagttac 507
            |||| ||||||||||      | |||||||| |||  ||||||||||||| ||||||| |
Sbjct: 997  aggcacctgggctcaagttgaagtcaggcactgggctcctaacataccttgtgtagtttc 938

                                                                        
Query: 508  gatcgtagtcaggatcactacgatctttttcagcgtccttaaaaacagcaaccctggaac 567
            |||||||||| || ||||||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 937  gatcgtagtctgggtcactacgatccttttcagtatccttaaaaacagcaactctggaac 878

                                                             
Query: 568  ggctattgaacgtgcagcccttgttctcatcaacagaaggctcaacatt 616
            |||| || |  |||| | | ||| | |||||||||||||||||||||||
Sbjct: 877  ggctgttcattgtgctgactttgatttcatcaacagaaggctcaacatt 829

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>gb|BT017305.1| Zea mays clone EL01N0316E09.c mRNA sequence
          Length = 1435

 Score =  246 bits (124), Expect = 8e-62
 Identities = 339/410 (82%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                        
Query: 207  atctcctagccatggttgaaggactggtacaccggaacctgagaaatcacatggccaaga 266
            |||| ||| ||||||||||| || |||||||  ||||||||||||||||     |||| |
Sbjct: 1192 atctactaaccatggttgaaagattggtacagaggaacctgagaaatcattgaaccaaca 1133

                                                                        
Query: 267  ttgtcgtagcaatggggatacatcattgctggggtaggccattgtgggtaaacagtagtt 326
            ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |
Sbjct: 1132 ttgtcatagcaatggggatacatcattgctggggttggccaatgtgggtaaacagcagct 1073

                                                                        
Query: 327  ccagaagaccccatcgataaatcaggttgaccaaagtacacaggaggttggtttctcggc 386
            |||||||||||||| | || |||||| || |||||||| |||| ||| |||||| | | |
Sbjct: 1072 ccagaagaccccattgttagatcaggctggccaaagtagacagcaggctggtttgtagac 1013

                                                                        
Query: 387  atgctaggagactgcatataaccgacaccatactgcataaactgaggcacagcaaaattg 446
            |||| |||||| |||| |||||| || ||||||||||||||||||||||   |||| |||
Sbjct: 1012 atgccaggagattgcacataaccaacgccatactgcataaactgaggca---caaagttg 956

                                                                        
Query: 447  aaggcgcctgggctcacaccataatcaggcacggggggcctaacataccttttgtagtta 506
            ||||| ||||||||||      | ||||| || |||  ||||||||||||||||||||| 
Sbjct: 955  aaggcacctgggctcaagttgaagtcaggaactgggctcctaacataccttttgtagttt 896

                                                                        
Query: 507  cgatcgtagtcaggatcactacgatctttttcagcgtccttaaaaacagcaaccctggaa 566
            ||||| || || || ||||| ||||| |||| ||  ||||| ||||||||||| ||||||
Sbjct: 895  cgatcataatctgggtcactgcgatccttttgagtatccttgaaaacagcaactctggaa 836

                                                              
Query: 567  cggctattgaacgtgcagcccttgttctcatcaacagaaggctcaacatt 616
            ||| | || | ||||| | | ||| | |||||||||||||| ||||||||
Sbjct: 835  cggttgttcatcgtgctgactttgatttcatcaacagaaggttcaacatt 786

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>gb|AY103781.1| Zea mays PCO113646 mRNA sequence
          Length = 1654

 Score =  246 bits (124), Expect = 8e-62
 Identities = 339/410 (82%), Gaps = 3/410 (0%)
 Strand = Plus / Minus

                                                                        
Query: 207  atctcctagccatggttgaaggactggtacaccggaacctgagaaatcacatggccaaga 266
            |||| ||| ||||||||||| || |||||||  ||||||||||||||||     |||| |
Sbjct: 1384 atctactaaccatggttgaaagattggtacagaggaacctgagaaatcattgaaccaaca 1325

                                                                        
Query: 267  ttgtcgtagcaatggggatacatcattgctggggtaggccattgtgggtaaacagtagtt 326
            ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| || |
Sbjct: 1324 ttgtcatagcaatggggatacatcattgctggggttggccaatgtgggtaaacagcagct 1265

                                                                        
Query: 327  ccagaagaccccatcgataaatcaggttgaccaaagtacacaggaggttggtttctcggc 386
            |||||||||||||| | || |||||| || |||||||| |||| ||| |||||| | | |
Sbjct: 1264 ccagaagaccccattgttagatcaggctggccaaagtagacagcaggctggtttgtagac 1205

                                                                        
Query: 387  atgctaggagactgcatataaccgacaccatactgcataaactgaggcacagcaaaattg 446
            |||| |||||| |||| |||||| || ||||||||||||||||||||||   |||| |||
Sbjct: 1204 atgccaggagattgcacataaccaacgccatactgcataaactgaggca---caaagttg 1148

                                                                        
Query: 447  aaggcgcctgggctcacaccataatcaggcacggggggcctaacataccttttgtagtta 506
            ||||| ||||||||||      | ||||| || |||  ||||||||||||||||||||| 
Sbjct: 1147 aaggcacctgggctcaagttgaagtcaggaactgggctcctaacataccttttgtagttt 1088

                                                                        
Query: 507  cgatcgtagtcaggatcactacgatctttttcagcgtccttaaaaacagcaaccctggaa 566
            ||||| || || || ||||| ||||| |||| ||  ||||| ||||||||||| ||||||
Sbjct: 1087 cgatcataatctgggtcactgcgatccttttgagtatccttgaaaacagcaactctggaa 1028

                                                              
Query: 567  cggctattgaacgtgcagcccttgttctcatcaacagaaggctcaacatt 616
            ||| | || | ||||| | | ||| | |||||||||||||| ||||||||
Sbjct: 1027 cggttgttcatcgtgctgactttgatttcatcaacagaaggttcaacatt 978

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>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
              complete sequence
          Length = 178061

 Score =  198 bits (100), Expect = 2e-47
 Identities = 183/210 (87%), Gaps = 3/210 (1%)
 Strand = Plus / Minus

                                                                          
Query: 243    acctgagaaatcacatggccaagattgtcgtagcaatggggatacatcattgctggggta 302
              ||||||||||||| ||| ||||||||||| ||||||||||| || ||||||||||| || 
Sbjct: 126606 acctgagaaatcatatgcccaagattgtcatagcaatgggggtatatcattgctggagtt 126547

                                                                          
Query: 303    ggccattgtgggtaaacagtagttccagaagac---cccatcgataaatcaggttgacca 359
              ||||| |||||||| |||| ||||||||||||    ||||| |||||||| ||||| |||
Sbjct: 126546 ggccactgtgggtagacagcagttccagaagaggagcccatagataaatcgggttggcca 126487

                                                                          
Query: 360    aagtacacaggaggttggtttctcggcatgctaggagactgcatataaccgacaccatac 419
              |||||||||| |||||||||||| | |||  ||| |||||||||| |||| |||||||||
Sbjct: 126486 aagtacacagaaggttggtttcttgacatattagcagactgcataaaaccaacaccatac 126427

                                            
Query: 420    tgcataaactgaggcacagcaaaattgaag 449
              ||||||||||| |||||| |||||||||||
Sbjct: 126426 tgcataaactgtggcacaacaaaattgaag 126397



 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                          
Query: 493    accttttgtagttacgatcgtagtcaggatcactacgatctttttcagcgtccttaaaaa 552
              |||| |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 126269 acctcttgtagttacgatcatagtcaggatcactacgatccttttcagtgtccttaaaaa 126210

                                                                          
Query: 553    cagcaaccctggaacggctattgaacgtgcagcccttgttctcatcaacagaaggctcaa 612
              ||||||| ||||||||||| || |  |||    |||| ||||||||||||| ||||||||
Sbjct: 126209 cagcaactctggaacggctgttcattgtgttcaccttattctcatcaacaggaggctcaa 126150

                  
Query: 613    catt 616
              ||||
Sbjct: 126149 catt 126146



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                   
Query: 195    ccaggaagtagcatctcctagccatggttgaaggactggtacaccggaacctg 247
              |||| |||||| |||||  |||||||||||||||||||||| |||||||||||
Sbjct: 127158 ccagcaagtaggatctctcagccatggttgaaggactggtaaaccggaacctg 127106



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 36     tgtttgtagattagtgcacaataac 60
              |||||||| ||||||||||||||||
Sbjct: 127318 tgtttgtaaattagtgcacaataac 127294

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  198 bits (100), Expect = 2e-47
 Identities = 183/210 (87%), Gaps = 3/210 (1%)
 Strand = Plus / Minus

                                                                            
Query: 243      acctgagaaatcacatggccaagattgtcgtagcaatggggatacatcattgctggggta 302
                ||||||||||||| ||| ||||||||||| ||||||||||| || ||||||||||| || 
Sbjct: 19985444 acctgagaaatcatatgcccaagattgtcatagcaatgggggtatatcattgctggagtt 19985385

                                                                            
Query: 303      ggccattgtgggtaaacagtagttccagaagac---cccatcgataaatcaggttgacca 359
                ||||| |||||||| |||| ||||||||||||    ||||| |||||||| ||||| |||
Sbjct: 19985384 ggccactgtgggtagacagcagttccagaagaggagcccatagataaatcgggttggcca 19985325

                                                                            
Query: 360      aagtacacaggaggttggtttctcggcatgctaggagactgcatataaccgacaccatac 419
                |||||||||| |||||||||||| | |||  ||| |||||||||| |||| |||||||||
Sbjct: 19985324 aagtacacagaaggttggtttcttgacatattagcagactgcataaaaccaacaccatac 19985265

                                              
Query: 420      tgcataaactgaggcacagcaaaattgaag 449
                ||||||||||| |||||| |||||||||||
Sbjct: 19985264 tgcataaactgtggcacaacaaaattgaag 19985235



 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                            
Query: 493      accttttgtagttacgatcgtagtcaggatcactacgatctttttcagcgtccttaaaaa 552
                |||| |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 19985107 acctcttgtagttacgatcatagtcaggatcactacgatccttttcagtgtccttaaaaa 19985048

                                                                            
Query: 553      cagcaaccctggaacggctattgaacgtgcagcccttgttctcatcaacagaaggctcaa 612
                ||||||| ||||||||||| || |  |||    |||| ||||||||||||| ||||||||
Sbjct: 19985047 cagcaactctggaacggctgttcattgtgttcaccttattctcatcaacaggaggctcaa 19984988

                    
Query: 613      catt 616
                ||||
Sbjct: 19984987 catt 19984984



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                     
Query: 195      ccaggaagtagcatctcctagccatggttgaaggactggtacaccggaacctg 247
                |||| |||||| |||||  |||||||||||||||||||||| |||||||||||
Sbjct: 19985996 ccagcaagtaggatctctcagccatggttgaaggactggtaaaccggaacctg 19985944



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 36       tgtttgtagattagtgcacaataac 60
                |||||||| ||||||||||||||||
Sbjct: 19986156 tgtttgtaaattagtgcacaataac 19986132

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>gb|BT018581.1| Zea mays clone EL01N0446A04.d mRNA sequence
          Length = 1555

 Score =  125 bits (63), Expect = 2e-25
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 485 cctaacataccttttgtagttacgatcgtagtcaggatcactacgatctttttcagcgtc 544
           ||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||  ||
Sbjct: 918 cctaacataccttttgtagtttcgatcgtagtctgggtcactacgatccttttcagtatc 859

                                                                       
Query: 545 cttaaaaacagcaaccctggaacggctattgaacgtgcagcccttgttctcatcaacaga 604
           ||||||||||||||| |||||||| || || |  |||| | | ||| | |||||||||||
Sbjct: 858 cttaaaaacagcaactctggaacgactgttcattgtgctgactttgatttcatcaacaga 799

                                  
Query: 605 aggctcaacattcaccggttcat 627
           ||| |||||||| || |||||||
Sbjct: 798 agggtcaacatttactggttcat 776



 Score =  121 bits (61), Expect = 3e-24
 Identities = 194/237 (81%), Gaps = 1/237 (0%)
 Strand = Plus / Minus

                                                                        
Query: 207  atctcctagccatggttgaaggactggtacaccggaacctgagaaatcacatggccaaga 266
            ||||||||  |||||||||| ||||||||||  ||||||||||| ||||   | | || |
Sbjct: 1197 atctcctaatcatggttgaaagactggtacagaggaacctgagacatcattggactaaca 1138

                                                                        
Query: 267  ttgtcgtagcaatgggg-atacatcattgctggggtaggccattgtgggtaaacagtagt 325
            || || ||||||||||| ||||||||||| |||||| ||||| ||| | ||||||| || 
Sbjct: 1137 ttatcatagcaatgggggatacatcattgttggggttggccaatgtcgataaacagcagc 1078

                                                                        
Query: 326  tccagaagaccccatcgataaatcaggttgaccaaagtacacaggaggttggtttctcgg 385
            || ||||||||| || | || |||||| || |||||||||| || | | |||||| | | 
Sbjct: 1077 tctagaagaccctattgttagatcaggctggccaaagtacatagtatgctggtttgtgga 1018

                                                                     
Query: 386  catgctaggagactgcatataaccgacaccatactgcataaactgaggcacagcaaa 442
            ||||| |||||| |||| |||||| |  |||||||||||||||||||||||| ||||
Sbjct: 1017 catgccaggagattgcacataaccaatgccatactgcataaactgaggcacaacaaa 961

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>emb|AL772228.5| Mouse DNA sequence from clone RP23-236D1 on chromosome 4, complete
              sequence
          Length = 167555

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 53     acaataacaataataaatattctta 77
              |||||||||||||||||||||||||
Sbjct: 105409 acaataacaataataaatattctta 105385

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>emb|CR627496.8| Zebrafish DNA sequence from clone DKEY-223G10 in linkage group 17,
            complete sequence
          Length = 154593

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 54   caataacaataataaatattctt 76
            |||||||||||||||||||||||
Sbjct: 9536 caataacaataataaatattctt 9558

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>ref|XM_393332.2| PREDICTED: Apis mellifera similar to GH03617p (LOC409841), mRNA
          Length = 2610

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 165  gcaggttttaacaaattttgttc 187
            |||||||||||||||||||||||
Sbjct: 2251 gcaggttttaacaaattttgttc 2273

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>gb|AC011364.4| Homo sapiens chromosome 5 clone CTC-529P8, complete sequence
          Length = 122394

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 423   ataaactgaggcacagcaaaat 444
             ||||||||||||||||||||||
Sbjct: 72861 ataaactgaggcacagcaaaat 72882

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>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence
          Length = 184002

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   gcataaactgaggcacagcaa 441
             |||||||||||||||||||||
Sbjct: 36447 gcataaactgaggcacagcaa 36467

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>emb|CR932438.14| Zebrafish DNA sequence from clone DKEY-250O4 in linkage group 13,
             complete sequence
          Length = 56325

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   gttttaacaaattttgttcca 189
             |||||||||||||||||||||
Sbjct: 51099 gttttaacaaattttgttcca 51079

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>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3, complete
              sequence
          Length = 226081

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     taacaataataaatattctta 77
              |||||||||||||||||||||
Sbjct: 126503 taacaataataaatattctta 126483

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>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence
          Length = 106747

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   aacaaattttgttccaacatc 194
             |||||||||||||||||||||
Sbjct: 93517 aacaaattttgttccaacatc 93537

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>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 38     tttgtagattagtgcacaataacaa 62
              |||||||||||||||| ||||||||
Sbjct: 205428 tttgtagattagtgcagaataacaa 205404

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>emb|AL807378.5| Zebrafish DNA sequence from clone CH211-215A18 in linkage group 7
             Contains three CpG islands, complete sequence
          Length = 198700

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    acaataacaataataaatatt 73
             |||||||||||||||||||||
Sbjct: 29764 acaataacaataataaatatt 29784

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>emb|BX927129.10| Zebrafish DNA sequence from clone DKEY-158N21 in linkage group 13,
              complete sequence
          Length = 154491

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    gttttaacaaattttgttcca 189
              |||||||||||||||||||||
Sbjct: 120549 gttttaacaaattttgttcca 120529

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>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete
             sequence
          Length = 88770

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 43    agattagtgcacaataacaataata 67
             |||||||| ||||||||||||||||
Sbjct: 46284 agattagtccacaataacaataata 46308

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>gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, complete sequence
          Length = 162837

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    aataacaataataaatattcttata 79
             ||||||||||||||||||| |||||
Sbjct: 67510 aataacaataataaatattgttata 67534

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>emb|AL935282.14| Zebrafish DNA sequence from clone CH211-281O21 in linkage group 2,
             complete sequence
          Length = 173134

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    taacaataataaatattctta 77
             |||||||||||||||||||||
Sbjct: 81401 taacaataataaatattctta 81421

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>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197962

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    caataacaataataaatatt 73
             ||||||||||||||||||||
Sbjct: 43697 caataacaataataaatatt 43716

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>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete
             sequence
          Length = 129271

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aataacaataataaatattc 74
             ||||||||||||||||||||
Sbjct: 27271 aataacaataataaatattc 27252

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>gb|AC102205.8| Mus musculus chromosome 7, clone RP24-194L15, complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ggaacctgagaaatcacatg 259
              ||||||||||||||||||||
Sbjct: 156499 ggaacctgagaaatcacatg 156480

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>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     caataacaataataaatatt 73
              ||||||||||||||||||||
Sbjct: 105903 caataacaataataaatatt 105884

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>gb|AC161440.8| Mus musculus chromosome 7, clone RP23-309B10, complete sequence
          Length = 181423

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  ggaacctgagaaatcacatg 259
            ||||||||||||||||||||
Sbjct: 5091 ggaacctgagaaatcacatg 5072

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>gb|AC134546.4| Mus musculus BAC clone RP24-471H17 from chromosome 18, complete
             sequence
          Length = 208921

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   agcaggttttaacaaatttt 183
             ||||||||||||||||||||
Sbjct: 66327 agcaggttttaacaaatttt 66346

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>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4,
              complete sequence
          Length = 331039

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     acaataacaataataaatat 72
              ||||||||||||||||||||
Sbjct: 250630 acaataacaataataaatat 250649

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>ref|XM_391681.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein
            (FG11505.1) partial mRNA
          Length = 4062

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 583  agcccttgttctcatcaaca 602
            ||||||||||||||||||||
Sbjct: 4015 agcccttgttctcatcaaca 3996

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>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     acaataacaataataaatat 72
              ||||||||||||||||||||
Sbjct: 156345 acaataacaataataaatat 156326

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>emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chromosome 13, complete
             sequence
          Length = 56239

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    acaataacaataataaatat 72
             ||||||||||||||||||||
Sbjct: 13247 acaataacaataataaatat 13228

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>emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 178323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     attagtgcacaataacaataataa 68
              |||||||||||| |||||||||||
Sbjct: 107653 attagtgcacaacaacaataataa 107676

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>gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178077

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    cacaataacaataataaata 71
             ||||||||||||||||||||
Sbjct: 26021 cacaataacaataataaata 26040

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>emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in linkage group 7,
             complete sequence
          Length = 97476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    acaataacaataataaatat 72
             ||||||||||||||||||||
Sbjct: 34619 acaataacaataataaatat 34600

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>emb|AL844157.5| Mouse DNA sequence from clone RP24-313C24 on chromosome 4 Contains a
              novel peudogene and a CpG island, complete sequence
          Length = 156075

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     cacaataacaataataaata 71
              ||||||||||||||||||||
Sbjct: 117061 cacaataacaataataaata 117042

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>gb|AC090160.6| Homo sapiens chromosome 11, clone RP11-413N10, complete sequence
          Length = 170008

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     ataataaatattcttataca 81
              ||||||||||||||||||||
Sbjct: 104502 ataataaatattcttataca 104483

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>emb|BX323842.8| Zebrafish DNA sequence from clone CH211-1M7, complete sequence
          Length = 162929

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 549   aaaacagcaaccctggaacg 568
             ||||||||||||||||||||
Sbjct: 22862 aaaacagcaaccctggaacg 22843

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>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    cacaataacaataataaata 71
             ||||||||||||||||||||
Sbjct: 10808 cacaataacaataataaata 10789

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>gb|AC100875.3| Homo sapiens chromosome 11, clone RP11-715M10, complete sequence
          Length = 195097

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     ataataaatattcttataca 81
              ||||||||||||||||||||
Sbjct: 140783 ataataaatattcttataca 140802

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>ref|XM_943260.1| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 6 (MPEG1), mRNA
          Length = 8269

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4743 ctgtttgtagattagtgcac 4724

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>ref|XM_943258.1| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 5 (MPEG1), mRNA
          Length = 7726

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4774 ctgtttgtagattagtgcac 4755

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>ref|XM_937323.1| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 4 (MPEG1), mRNA
          Length = 8300

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4774 ctgtttgtagattagtgcac 4755

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>ref|XM_931724.1| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 3 (MPEG1), mRNA
          Length = 8270

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4744 ctgtttgtagattagtgcac 4725

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>ref|XM_931718.1| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 2 (MPEG1), mRNA
          Length = 7727

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4775 ctgtttgtagattagtgcac 4756

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>ref|XM_166227.6| PREDICTED: Homo sapiens macrophage expressed gene 1, transcript
            variant 1 (MPEG1), mRNA
          Length = 8301

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 4775 ctgtttgtagattagtgcac 4756

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>ref|XM_937661.1| PREDICTED: Homo sapiens deltex 4 homolog (Drosophila) (DTX4), mRNA
          Length = 8051

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 5600 ctgtttgtagattagtgcac 5619

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>ref|XM_166213.6| PREDICTED: Homo sapiens deltex 4 homolog (Drosophila) (DTX4), mRNA
          Length = 8051

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 5600 ctgtttgtagattagtgcac 5619

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>gb|AC068303.10| Homo sapiens 3 BAC RP11-324H4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172695

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    gcataaactgaggcacagca 440
              ||||||||||||||||||||
Sbjct: 167525 gcataaactgaggcacagca 167506

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>gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
          Length = 148359

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     attagtgcacaataacaataataa 68
              |||||||||||| |||||||||||
Sbjct: 128487 attagtgcacaacaacaataataa 128510

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>ref|XM_626912.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_3630),
            partial mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   acaataacaataataaatat 72
            ||||||||||||||||||||
Sbjct: 1277 acaataacaataataaatat 1296

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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    gcataaactgaggcacagca 440
              ||||||||||||||||||||
Sbjct: 141537 gcataaactgaggcacagca 141556

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>gb|AC155909.9| Mus musculus 10 BAC RP24-477D23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 195877

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   aggttttaacaaattttgtt 186
             ||||||||||||||||||||
Sbjct: 60818 aggttttaacaaattttgtt 60837

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>emb|BX682533.6| Mouse DNA sequence from clone RP23-108L1 on chromosome 4, complete
             sequence
          Length = 160792

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    acaataacaataataaatat 72
             ||||||||||||||||||||
Sbjct: 51182 acaataacaataataaatat 51163

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>gb|AC150625.3| Atelerix albiventris clone LB4-57B20, complete sequence
          Length = 81183

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    acaataacaataataaatat 72
             ||||||||||||||||||||
Sbjct: 79509 acaataacaataataaatat 79528

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>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    atgatggggaaaaactgact 127
              ||||||||||||||||||||
Sbjct: 250194 atgatggggaaaaactgact 250213

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>emb|CR388173.7| Zebrafish DNA sequence from clone DKEYP-109D11 in linkage group 19,
             complete sequence
          Length = 55374

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    cacaataacaataataaata 71
             ||||||||||||||||||||
Sbjct: 44088 cacaataacaataataaata 44069

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>emb|CR352301.7| Zebrafish DNA sequence from clone CH211-147A11 in linkage group 8,
              complete sequence
          Length = 176256

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aataacaataataaatattc 74
              ||||||||||||||||||||
Sbjct: 133407 aataacaataataaatattc 133388

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>emb|BX571830.6| Zebrafish DNA sequence from clone DKEY-261I16 in linkage group 19,
            complete sequence
          Length = 143486

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   caataacaataataaatatt 73
            ||||||||||||||||||||
Sbjct: 3031 caataacaataataaatatt 3050

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>emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in linkage group 22,
             complete sequence
          Length = 51574

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    aataacaataataaatattcttat 78
             ||||||||||||||||||| ||||
Sbjct: 13845 aataacaataataaatattattat 13868

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>emb|BX005306.20| Zebrafish DNA sequence from clone DKEY-78C7 in linkage group 20,
             complete sequence
          Length = 135228

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aataacaataataaatattc 74
             ||||||||||||||||||||
Sbjct: 32572 aataacaataataaatattc 32553

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>emb|BX248111.7| Zebrafish DNA sequence from clone DKEY-22L11 in linkage group 4, complete
              sequence
          Length = 185023

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     acaataacaataataaatat 72
              ||||||||||||||||||||
Sbjct: 178507 acaataacaataataaatat 178526

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>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete
              sequence
          Length = 303928

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     cacaataacaataataaata 71
              ||||||||||||||||||||
Sbjct: 240189 cacaataacaataataaata 240170

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>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete
             sequences
          Length = 169340

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    ataataaatattcttataca 81
             ||||||||||||||||||||
Sbjct: 36660 ataataaatattcttataca 36679

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>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
              sequence
          Length = 201142

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     cacaataacaataataaata 71
              ||||||||||||||||||||
Sbjct: 192738 cacaataacaataataaata 192719

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>emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & CYP_b genes
          Length = 234411

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    cacaataacaataataaata 71
             ||||||||||||||||||||
Sbjct: 87365 cacaataacaataataaata 87346

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>dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1036E20, complete
             sequences
          Length = 190904

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ctgtttgtagattagtgcac 54
             ||||||||||||||||||||
Sbjct: 27748 ctgtttgtagattagtgcac 27767

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>dbj|AB023154.1| Homo sapiens mRNA for KIAA0937 protein, partial cds
          Length = 5650

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   ctgtttgtagattagtgcac 54
            ||||||||||||||||||||
Sbjct: 5260 ctgtttgtagattagtgcac 5279

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>emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chromosome 4, complete
            sequence
          Length = 147323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   cacaataacaataataaata 71
            ||||||||||||||||||||
Sbjct: 1054 cacaataacaataataaata 1035


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,543,214
Number of Sequences: 3902068
Number of extensions: 5543214
Number of successful extensions: 138428
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138144
Number of HSP's gapped (non-prelim): 272
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result