| Clone Name | rbasd22j16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DFG16_YEAST (Q99234) Protein DFG16 (Extracellular matrix protein... | 30 | 4.9 | 2 | CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive pro... | 29 | 8.3 |
|---|
>DFG16_YEAST (Q99234) Protein DFG16 (Extracellular matrix protein 41)| (Zinc-regulated gene 11 protein) Length = 619 Score = 30.0 bits (66), Expect = 4.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 Query: 188 LGSNMTAATSNSHHIKPYAYILGYPSLL*PQETASTDP 301 L + SNS H++ Y Y L YPS L + S +P Sbjct: 92 LTGGFISLASNSWHLRAYNYTLNYPSFLIRCDNGSANP 129
>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1| Length = 571 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 562 PLNPEVIGLARDKVKNCYHKDFVIDVDQQWLLQGWKGRILYAISTW 425 PL+ V + R K+ CY + +D +L GW+ R L + S W Sbjct: 526 PLSSYVNSVIR-KLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,869,153 Number of Sequences: 219361 Number of extensions: 1520178 Number of successful extensions: 2972 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2972 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)