>gb|BT009007.1| Triticum aestivum clone wdk2c.pk019.h18:fis, full insert mRNA
           sequence
          Length = 681

 Score =  111 bits (56), Expect = 1e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 52  ccatatttataacaccaccacacacaaatcaggcacaaacacgacgtacagccaagtaaa 111
           |||||||||  ||| |||||||||||||||||||||||||| | |||||||| || ||||
Sbjct: 603 ccatatttagtacatcaccacacacaaatcaggcacaaacagg-cgtacagcgaactaaa 545

                                              
Query: 112 ctaccgagaccccgattggttttntactttattat 146
           | ||||||||||||||||||||| |||||||||||
Sbjct: 544 caaccgagaccccgattggttttctactttattat 510



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 250 gatcggacgtctcggcgctggccgg 274
           |||||||||||||||||||||||||
Sbjct: 382 gatcggacgtctcggcgctggccgg 358



 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 284 ctagcagggcctattgcagaagcacttgcgctcga 318
           |||||||  ||| ||||||||||||||||||||||
Sbjct: 331 ctagcagaccctcttgcagaagcacttgcgctcga 297



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 36/42 (85%)
 Strand = Plus / Minus

                                                     
Query: 166 acacaccgacgaacagaacatagctagntaacggnacggatg 207
           |||||| ||||||||||||| |  ||| |||||| |||||||
Sbjct: 486 acacacggacgaacagaacaaaagtagctaacggcacggatg 445

>gb|BT009073.1| Triticum aestivum clone wip1c.pk002.f10:fis, full insert mRNA
           sequence
          Length = 632

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 89  aacacgacgtacagccaagtaaactaccgagaccccgattggttttntactttatta 145
           |||| |||| ||||| || ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 591 aacaggacgcacagcgaactaaactagcgagaccccgattggttctctactttatta 535



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 283 actagcagggcctattgcagaagcacttgcgctc 316
           ||||||||||||| ||||||||||||||||||||
Sbjct: 383 actagcagggcctcttgcagaagcacttgcgctc 350

>gb|BT009100.1| Triticum aestivum clone wkm2n.pk003.d23:fis, full insert mRNA
           sequence
          Length = 635

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                       
Query: 73  acacaaatcaggcacaaacacgacgtacagccaagtaaactaccgagaccccgattggtt 132
           ||||||| ||| ||||||||| |||| | |||||  ||||||||||| ||||| ||| ||
Sbjct: 559 acacaaagcagccacaaacactacgtgcggccaaccaaactaccgagtccccggttgatt 500

                          
Query: 133 ttntactttattatg 147
           |  ||||||||||||
Sbjct: 499 tcctactttattatg 485



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 50/57 (87%), Gaps = 1/57 (1%)
 Strand = Plus / Minus

                                                                    
Query: 262 cggcgctggccggngggacggactagcagggcctattgcagaagcacttgcgctcga 318
           |||||||||||||  || ||| |||||||  ||| ||||||||||||||||||||||
Sbjct: 371 cggcgctggccggcagggcgg-ctagcagaccctcttgcagaagcacttgcgctcga 316

>gb|BT009000.1| Triticum aestivum clone wdk2c.pk015.k3:fis, full insert mRNA
           sequence
          Length = 626

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 50/57 (87%), Gaps = 2/57 (3%)
 Strand = Plus / Minus

                                                                    
Query: 89  aacacgacgtacagccaagtaaactaccgagaccccgattggttttntactttatta 145
           ||||| |||||||||||| ||||||  |||||||||||||| ||||  |||||||||
Sbjct: 610 aacaccacgtacagccaactaaact--cgagaccccgattgattttccactttatta 556



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 280 cggactagcagggcctattgcagaagcacttgcgctcga 318
           ||||||||||| |||| | ||||||||||||||||||||
Sbjct: 422 cggactagcagagcctctcgcagaagcacttgcgctcga 384

>gb|BT008925.1| Triticum aestivum clone waw1c.pk005.e22:fis, full insert mRNA
           sequence
          Length = 662

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 72  cacacaaatcaggcacaaacacgacgtacagccaagtaaactaccgagaccccgattggt 131
           |||||||| |||  ||||||||||||| | || ||  ||||||||||||||||| ||| |
Sbjct: 566 cacacaaagcagcgacaaacacgacgtgctgcgaaccaaactaccgagaccccggttgat 507

                         
Query: 132 tttntactttatta 145
           ||  ||||||||||
Sbjct: 506 ttcgtactttatta 493



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 284 ctagcagggcctattgcagaagcacttgcg 313
           |||||||| ||| |||||||||||||||||
Sbjct: 342 ctagcaggccctcttgcagaagcacttgcg 313

>gb|BT009231.1| Triticum aestivum clone wle1n.pk0096.f4:fis, full insert mRNA
           sequence
          Length = 637

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 250 gatcggacgtctcggcgctggccgg 274
           |||||||||||||||||||||||||
Sbjct: 387 gatcggacgtctcggcgctggccgg 363



 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 284 ctagcagggcctattgcagaagcacttgcg 313
           |||||||| ||| |||||||||||||||||
Sbjct: 336 ctagcaggccctcttgcagaagcacttgcg 307

>ref|XM_473224.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 246

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 284 ctagcagggcctattgcagaagcacttgcgctcga 318
           ||||||| || | ||||||||||||||||||||||
Sbjct: 246 ctagcagcgcttcttgcagaagcacttgcgctcga 212

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 284      ctagcagggcctattgcagaagcacttgcgctcga 318
                ||||||| || | ||||||||||||||||||||||
Sbjct: 26094228 ctagcagcgcttcttgcagaagcacttgcgctcga 26094194

>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 284    ctagcagggcctattgcagaagcacttgcgctcga 318
              ||||||| || | ||||||||||||||||||||||
Sbjct: 128555 ctagcagcgcttcttgcagaagcacttgcgctcga 128521

>ref|XM_466875.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 297 ttgcagaagcacttgcgctcga 318
           ||||||||||||||||||||||
Sbjct: 318 ttgcagaagcacttgcgctcga 297

>gb|BT009554.1| Triticum aestivum clone wre1.pk0001.d8:fis, full insert mRNA
           sequence
          Length = 631

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 297 ttgcagaagcacttgcgctcga 318
           ||||||||||||||||||||||
Sbjct: 292 ttgcagaagcacttgcgctcga 271

>gb|BT009107.1| Triticum aestivum clone wkm2n.pk009.f17:fis, full insert mRNA
           sequence
          Length = 629

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 297 ttgcagaagcacttgcgctcga 318
           ||||||||||||||||||||||
Sbjct: 346 ttgcagaagcacttgcgctcga 325

>gb|AF067619.1| Caenorhabditis elegans cosmid K03E5, complete sequence
          Length = 33883

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 73    acacaaatcaggcacaaacacg 94
             ||||||||||||||||||||||
Sbjct: 24287 acacaaatcaggcacaaacacg 24266

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 297      ttgcagaagcacttgcgctcga 318
                ||||||||||||||||||||||
Sbjct: 25209396 ttgcagaagcacttgcgctcga 25209375

>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1469H02
          Length = 136602

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 297    ttgcagaagcacttgcgctcga 318
              ||||||||||||||||||||||
Sbjct: 109789 ttgcagaagcacttgcgctcga 109768

>dbj|AK121915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C08, full
           insert sequence
          Length = 603

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 297 ttgcagaagcacttgcgctcga 318
           ||||||||||||||||||||||
Sbjct: 318 ttgcagaagcacttgcgctcga 297

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 161     gcagaacacaccgacgaacagaaca 185
               |||||| ||||||||||||||||||
Sbjct: 1232817 gcagaatacaccgacgaacagaaca 1232793

>emb|BX294434.12| Zebrafish DNA sequence from clone CH211-236H17 in linkage group 23,
              complete sequence
          Length = 172764

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 55     tatttataacaccaccacacacaaa 79
              |||||| ||||||||||||||||||
Sbjct: 169778 tatttaaaacaccaccacacacaaa 169754

>dbj|AB089942.1| Triticum aestivum Tad1 mRNA for defensin, complete cds
          Length = 682

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ttgcagaagcacttgcgctcgacg 320
           |||||| |||||||||||||||||
Sbjct: 335 ttgcagtagcacttgcgctcgacg 312

>gb|AY109874.1| Zea mays CL5311_1 mRNA sequence
          Length = 685

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 283 actagcagggcctattgcagaagcacttgcgc 314
           ||||||| ||| | ||||||||||||||||||
Sbjct: 241 actagcaaggcttcttgcagaagcacttgcgc 272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,741,005
Number of Sequences: 3902068
Number of extensions: 1741005
Number of successful extensions: 27985
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27928
Number of HSP's gapped (non-prelim): 55
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)