ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd22j06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X52472.1|TAPRP T.aestivum mRNA for a proline-rich protein Length = 1487 Score = 432 bits (218), Expect = e-118 Identities = 343/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Minus Query: 2 cacgcaaatgatnattacaaagtagtaataatcatcatgggtgcatggaacaagagaaac 61 |||||||||||| |||||| | ||||| || |||||||||||||||||||||| |||||| Sbjct: 1441 cacgcaaatgataattacagaatagtagtactcatcatgggtgcatggaacaacagaaac 1382 Query: 62 taaaaagggatgatggaatacaaggaatgcnnnnnnnngatgcatcatcactatctcgct 121 ||||| || ||| ||||||||||||||| | |||||||||||||||||||||| Sbjct: 1381 taaaa-ggaatggtggaatacaaggaatacaaaaa---gatgcatcatcactatctcgct 1326 Query: 122 agccggatactatgccacttattctggaaatagcacatcgtggctccggacggggtcgat 181 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1325 aaccggatactatgccacttattctagaaatagcacatcgtggctccggacggggtcgat 1266 Query: 182 ctcctcctccttcggctgtcatatgtgagcatcacatcaattgtccgtcatcggcggctt 241 |||||||| || ||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 1265 ctcctcct---tcagctgtcatatgtgagtatcacatcaattgtcagtcatcggtggctt 1209 Query: 242 gcccttcggaggcggctccggcttgggttcgggttcaggcttgggctctggcttaggcat 301 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1208 gcccttcggaggcggctccggcttcggttcgggctcaggcttgggctctggcttaggcat 1149 Query: 302 gggttgaggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcat 361 |||| |||||| ||||||||||| |||| ||| | ||||| ||||||||||||||||| Sbjct: 1148 aggttcaggcttaggctctggtttaggcaatggtttgggcttaggctctggctttggcat 1089 Query: 362 cggctcgggcttaggctccggctt 385 |||||| ||||| ||||| ||||| Sbjct: 1088 cggctcaggcttgggctctggctt 1065 Score = 103 bits (52), Expect = 6e-19 Identities = 77/86 (89%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 559 ggctcgggctttggttcaggttttggcataggctcgggcttgggctctggctttggttcc 500 Query: 453 ggntttggcatnggctctggcttggg 478 || || ||||| |||||||||||||| Sbjct: 499 ggtttgggcatcggctctggcttggg 474 Score = 101 bits (51), Expect = 3e-18 Identities = 118/141 (83%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggctccggctttggcatcggctc 397 |||||||||||||||||| ||||| || || ||||||||||| || || |||| || | Sbjct: 1172 aggcttgggctctggcttaggcataggttcaggcttaggctctggtttaggcaatggttt 1113 Query: 398 tggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggntt 457 ||||| || || || |||||||||||||| || |||||||||||||||||||| || || Sbjct: 1112 gggcttaggctctggctttggcatcggctcaggcttgggctctggcttcggttctggctt 1053 Query: 458 tggcatnggctctggcttggg 478 ||||| ||||| |||||||| Sbjct: 1052 cggcattggctcgggcttggg 1032 Score = 99.6 bits (50), Expect = 1e-17 Identities = 109/128 (85%), Gaps = 6/128 (4%) Strand = Plus / Minus Query: 351 ggctttggcatcggctcgggcttaggctccggctttggcatcggctctggcttgggttca 410 ||||||||||||||||| ||||| ||||| || ||||| |||||||||| ||||| Sbjct: 1015 ggctttggcatcggctctggcttgggctcggg-tttgg-----gctctggctttggttcc 962 Query: 411 ggttttggcatcggctcgggtttgggctctggcttcggttcaggntttggcatnggctct 470 || |||||||||||||||||||||||||||||||| ||||| || || ||||| ||||| Sbjct: 961 ggctttggcatcggctcgggtttgggctctggctttggttctggtttgggcatcggctcg 902 Query: 471 ggcttggg 478 || ||||| Sbjct: 901 ggtttggg 894 Score = 99.6 bits (50), Expect = 1e-17 Identities = 69/76 (90%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 664 ggctctggctttggttctggtttaggcatcggctcgggcttgggctctggcttcggttcg 605 Query: 453 ggntttggcatnggct 468 || |||||||| |||| Sbjct: 604 ggttttggcatcggct 589 Score = 87.7 bits (44), Expect = 4e-14 Identities = 75/86 (87%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| || || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1075 ggctctggcttcggttctggcttcggcattggctcgggcttgggctcgggctttggttcc 1016 Query: 453 ggntttggcatnggctctggcttggg 478 || |||||||| |||||||||||||| Sbjct: 1015 ggctttggcatcggctctggcttggg 990 Score = 87.7 bits (44), Expect = 4e-14 Identities = 75/86 (87%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| || || Sbjct: 853 ggctcaggctttggttccggttttggcatcggctcgggcttgggctcgggcttgggctcc 794 Query: 453 ggntttggcatnggctctggcttggg 478 || |||||||| ||||| |||||||| Sbjct: 793 ggttttggcatcggctcaggcttggg 768 Score = 87.7 bits (44), Expect = 4e-14 Identities = 75/86 (87%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||| |||||||| || ||||||||||||||||| || |||||||| ||||| ||||| Sbjct: 811 ggctcgggcttgggctccggttttggcatcggctcaggcttgggctcaggcttgggttcc 752 Query: 453 ggntttggcatnggctctggcttggg 478 || |||||||| ||||| |||||||| Sbjct: 751 ggttttggcatcggctcaggcttggg 726 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcatcggctc 367 ||||||||||||||| || ||||| || | |||||| |||||||| || |||| || | Sbjct: 1172 aggcttgggctctggcttaggcataggttcaggcttaggctctggtttaggcaatggttt 1113 Query: 368 gggcttaggctccggctttggcatcggctctggcttggg 406 |||||||||||| ||||||||||||||||| |||||||| Sbjct: 1112 gggcttaggctctggctttggcatcggctcaggcttggg 1074 Score = 83.8 bits (42), Expect = 6e-13 Identities = 67/76 (88%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||| ||||||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 769 ggctcaggcttgggttccggttttggcatcggctcaggcttgggctctggcttaggttcg 710 Query: 453 ggntttggcatnggct 468 || || ||||| |||| Sbjct: 709 ggtttcggcatcggct 694 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/100 (84%), Gaps = 1/100 (1%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngctngggctctggcttcngctc 524 ||||||||||| ||||| |||| |||||||||||| ||| ||||||||||||| | || Sbjct: 664 ggctctggctttggttc-tggtttaggcatcggctcgggcttgggctctggcttcggttc 606 Query: 525 gggctntggcatnggtttangctcangcttcatcngctcg 564 ||| | |||||| || ||| ||||| |||||||| ||||| Sbjct: 605 gggttttggcatcggcttaggctcaggcttcatcggctcg 566 Score = 83.8 bits (42), Expect = 6e-13 Identities = 55/60 (91%) Strand = Plus / Minus Query: 419 catcggctcgggtttgggctctggcttcggttcaggntttggcatnggctctggcttggg 478 ||||||||||||||||||||| ||||| |||||||| |||||||| ||||| |||||||| Sbjct: 575 catcggctcgggtttgggctcgggctttggttcaggttttggcataggctcgggcttggg 516 Score = 79.8 bits (40), Expect = 9e-12 Identities = 63/71 (88%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| || ||| Sbjct: 937 ggctctggctttggttctggtttgggcatcggctcgggtttgggctcaggcttaggctca 878 Query: 453 ggntttggcat 463 || || ||||| Sbjct: 877 ggtttgggcat 867 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttt 415 ||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct: 1033 ggctcgggctttggttccggctttggcatcggctctggcttgggctcgggttt 981 Score = 73.8 bits (37), Expect = 6e-10 Identities = 53/59 (89%) Strand = Plus / Minus Query: 420 atcggctcgggtttgggctctggcttcggttcaggntttggcatnggctctggcttggg 478 |||||||||||||||||||||||||| ||||| || || ||||| ||||| |||||||| Sbjct: 679 atcggctcgggtttgggctctggctttggttctggtttaggcatcggctcgggcttggg 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/86 (84%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| ||||| ||||||||||| || |||||||| ||||| || ||| Sbjct: 517 ggctctggctttggttccggtttgggcatcggctctggcttgggctcaggcttaggctca 458 Query: 453 ggntttggcatnggctctggcttggg 478 || || ||||| || || |||||||| Sbjct: 457 ggtttgggcatcgggtcaggcttggg 432 Score = 69.9 bits (35), Expect = 9e-09 Identities = 113/140 (80%), Gaps = 6/140 (4%) Strand = Plus / Minus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctttggcatcggctct 398 ||||| || |||||||| ||||| ||||||||||| ||||| |||||||| ||||| | Sbjct: 1069 ggcttcggttctggcttcggcattggctcgggcttgggctcgggctttggttccggcttt 1010 Query: 399 ggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggnttt 458 ||| | || || |||| | ||||||||||||||||||||||| ||||| || ||| Sbjct: 1009 ggcatcggctc------tggcttgggctcgggtttgggctctggctttggttccggcttt 956 Query: 459 ggcatnggctctggcttggg 478 ||||| ||||| || ||||| Sbjct: 955 ggcatcggctcgggtttggg 936 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttggcattgggtaaggcttgggctctggctttgg 358 |||||| ||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 890 aggcttaggctcaggtttgggcattgggtaaggcttgggctcaggctttgg 840 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcagg 412 ||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 811 ggctcgggcttgggctccggttttggcatcggctcaggcttgggctcagg 762 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/117 (80%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngctngggctctggcttcngctc 524 ||||| ||||||||||| |||||||||||||||| ||| |||||||||||| | || Sbjct: 769 ggctcaggcttgggttc-cggttttggcatcggctcaggcttgggctctggcttaggttc 711 Query: 525 gggctntggcatnggtttangctcangcttcatcngctcgannttgngctctggctt 581 ||| | ||||| || ||| ||||| |||| ||| ||||| ||| |||||||||| Sbjct: 710 gggtttcggcatcggcttaggctcaggctttatcggctcgggtttgggctctggctt 654 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 291 ggcttaggcatgggttgaggcttgggctctggttttggcattgggtaaggcttgggctct 350 |||| |||| |||| | ||||||||| || ||||||||||| || | ||||||||||||| Sbjct: 781 ggctcaggcttgggctcaggcttgggttccggttttggcatcggctcaggcttgggctct 722 Query: 351 ggctt 355 ||||| Sbjct: 721 ggctt 717 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 309 ggcttgggctctggttttggcattgggtaaggcttgggctctggctt 355 ||||||||||| ||||||||||| || | |||||||||||| ||||| Sbjct: 805 ggcttgggctccggttttggcatcggctcaggcttgggctcaggctt 759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctt 385 ||||||||||| || |||||||||||||| ||||| ||||| ||||| Sbjct: 805 ggcttgggctccggttttggcatcggctcaggcttgggctcaggctt 759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttggcattgggtaaggcttgggctctggctttgg 358 |||||| ||||| ||||| ||||| |||| |||||||||||| |||||||| Sbjct: 470 aggcttaggctcaggtttgggcatcgggtcaggcttgggctcaggctttgg 420 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggctccggctttggcatcggctc 397 |||||| || || |||||||| |||||||| ||||| |||||||| || ||| |||| Sbjct: 428 aggctttggttcgggctttgggatcggctccggcttcggctccggtttgggctctggctt 369 Query: 398 tggcttgggttcaggttttggca 420 |||| ||||||||||||| |||| Sbjct: 368 tggcatgggttcaggtttgggca 346 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcagg 412 ||||| ||||| || ||||| || |||||||||||||||||||| ||||| Sbjct: 517 ggctctggctttggttccggtttgggcatcggctctggcttgggctcagg 468 Score = 52.0 bits (26), Expect = 0.002 Identities = 122/155 (78%), Gaps = 6/155 (3%) Strand = Plus / Minus Query: 321 ggttttggcattgggtaaggcttgggctctggctttggcatcggctcgggcttaggctcc 380 ||||||||||| || | |||||||||||||||||||| ||| | |||| | ||||| Sbjct: 541 ggttttggcataggctcgggcttgggctctggctttggttccggtttgggcatcggctc- 483 Query: 381 ggctttggcatcggctctggcttgggttcaggttttggcatcggctcgggtttgggctct 440 |||| | ||||| ||||| || |||||||| |||||||| || || |||||||| Sbjct: 482 -----tggcttgggctcaggcttaggctcaggtttgggcatcgggtcaggcttgggctca 428 Query: 441 ggcttcggttcaggntttggcatnggctctggctt 475 ||||| ||||| || ||||| || ||||| ||||| Sbjct: 427 ggctttggttcgggctttgggatcggctccggctt 393 Score = 50.1 bits (25), Expect = 0.008 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngctngggctctggctt 518 ||||| ||||| |||||| |||||||||| |||||| ||| |||||||||||| Sbjct: 559 ggctcgggctttggttcag-gttttggcataggctcgggcttgggctctggctt 507 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/83 (81%) Strand = Plus / Minus Query: 398 tggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggntt 457 |||| ||||||||||||| |||| |||| || | |||| |||| | |||||||| || Sbjct: 326 tggcatgggttcaggtttaggcagaggcttaggctctggctttggcatgggttcaggctt 267 Query: 458 tggcatnggctctggcttgggtt 480 ||||| |||||||||||||||| Sbjct: 266 aggcattggctctggcttgggtt 244 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttggg 406 ||||| ||||| || ||||| |||||||||||||| |||||||| Sbjct: 853 ggctcaggctttggttccggttttggcatcggctcgggcttggg 810 Score = 48.1 bits (24), Expect = 0.032 Identities = 31/34 (91%) Strand = Plus / Minus Query: 485 gttttggcatcggctcgngctngggctctggctt 518 ||||||||||||||||| ||| |||||| ||||| Sbjct: 834 gttttggcatcggctcgggcttgggctcgggctt 801 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 354 tttggcatcggctcgggcttaggctccggctt 385 |||||||||||||||||||| ||||| ||||| Sbjct: 832 tttggcatcggctcgggcttgggctcgggctt 801 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttggg 406 ||||| ||||| || ||||| |||||||||||||| |||||||| Sbjct: 769 ggctcaggcttgggttccggttttggcatcggctcaggcttggg 726 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggctccggctt 385 ||||||||| || || |||||||||||||| ||||| ||||| ||||| Sbjct: 764 aggcttgggttccggttttggcatcggctcaggcttgggctctggctt 717 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttttgg 418 ||||| ||||||||||| || || |||||||| || |||||||| ||||| ||||| Sbjct: 475 ggctcaggcttaggctcaggtttgggcatcgggtcaggcttgggctcaggctttgg 420 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 282 ttgggctctggcttaggcatgggttgaggcttgggc 317 |||||||||||||| |||||||||| ||| |||||| Sbjct: 382 ttgggctctggctttggcatgggttcaggtttgggc 347 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 278 aggcttgggctctggcttaggcatgggttgaggctt 313 |||||| ||||||||||| |||||||||| |||||| Sbjct: 302 aggcttaggctctggctttggcatgggttcaggctt 267 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggc 377 |||||| ||||||||||||||||| || || ||||||||| Sbjct: 302 aggcttaggctctggctttggcatgggttcaggcttaggc 263 Score = 46.1 bits (23), Expect = 0.13 Identities = 30/33 (90%) Strand = Plus / Minus Query: 487 tttggcatcggctcgngctngggctctggcttc 519 |||||||||||||| ||| ||||||||||||| Sbjct: 1096 tttggcatcggctcaggcttgggctctggcttc 1064 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 276 tcaggcttgggctctggcttagg 298 ||||||||||||||||||||||| Sbjct: 736 tcaggcttgggctctggcttagg 714 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctt 385 ||||| || ||||| || ||||||||||||||||| ||||| ||||| Sbjct: 658 ggctttggttctggtttaggcatcggctcgggcttgggctctggctt 612 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 354 tttggcatcggctcgggcttaggctccggctttgg 388 |||||||| ||||||||||| ||||| |||||||| Sbjct: 538 tttggcataggctcgggcttgggctctggctttgg 504 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Minus Query: 272 gggttcaggcttgggctctggcttaggcatgggttgaggcttgggctctgg 322 |||||||||||| ||| ||||| ||| ||||||| |||||||||||||| Sbjct: 278 gggttcaggcttaggcattggctctggcttgggttgcggcttgggctctgg 228 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/32 (90%) Strand = Plus / Minus Query: 487 tttggcatcggctcgngctngggctctggctt 518 ||||||||||||||| | | |||||||||||| Sbjct: 958 tttggcatcggctcgggtttgggctctggctt 927 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 260 cggcttgggttcgggttcaggcttgggctctggcttaggcatgggttgaggcttgggctc 319 ||||| ||||| ||| |||||||| ||||| || || ||||| || | |||||||||||| Sbjct: 908 cggctcgggtttgggctcaggcttaggctcaggtttgggcattgggtaaggcttgggctc 849 Query: 320 tggttttgg 328 || ||||| Sbjct: 848 aggctttgg 840 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 tcggctcgggtttgggctctggctt 445 ||||||| ||||||||||||||||| Sbjct: 393 tcggctccggtttgggctctggctt 369 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 gaggcttgggctctggttttggcat 331 ||||||| ||||||||||||||||| Sbjct: 345 gaggcttaggctctggttttggcat 321 Score = 40.1 bits (20), Expect = 7.9 Identities = 30/34 (88%) Strand = Plus / Minus Query: 485 gttttggcatcggctcgngctngggctctggctt 518 |||||||||||||||| ||| |||||| ||||| Sbjct: 792 gttttggcatcggctcaggcttgggctcaggctt 759 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttggg 406 ||||||||||| || || || |||||||| ||||| |||||||| Sbjct: 559 ggctcgggctttggttcaggttttggcataggctcgggcttggg 516 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 381 ggctttggcatcggctctggcttgggtt 408 ||||| ||||| |||||||||||||||| Sbjct: 271 ggcttaggcattggctctggcttgggtt 244
>emb|AJ234401.1|HVU234401 Hordeum vulgare partial mRNA; clone cMWG0646 Length = 694 Score = 198 bits (100), Expect = 1e-47 Identities = 126/133 (94%), Gaps = 2/133 (1%) Strand = Plus / Minus Query: 333 gggtaaggcttgggctctggctttggcat-cggctcgggcttaggctccggctttggcat 391 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 694 gggtaaggcttgggctctggctttggcattcggctcgggcttaggctccggctttggcat 635 Query: 392 cggctctggcttgggttca-ggttttggcatcggctcgggtttgggctctggcttcggtt 450 ||||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 634 cggctctggcttgggktcagggttttggcctcggctcgggcttgggctctggcttcggtt 575 Query: 451 caggntttggcat 463 | || |||||||| Sbjct: 574 cgggttttggcat 562 Score = 135 bits (68), Expect = 2e-28 Identities = 123/147 (83%) Strand = Plus / Minus Query: 435 ggctctggcttcggttcaggntttggcatnggctctggcttgggttcanngttttggcat 494 ||||| ||||| || || || |||||||| |||||||||||||| ||| |||||||| | Sbjct: 663 ggctcgggcttaggctccggctttggcatcggctctggcttgggktcagggttttggcct 604 Query: 495 cggctcgngctngggctctggcttcngctcgggctntggcatnggtttangctcangctt 554 ||||||| ||| ||||||||||||| | ||||| | |||||| |||||| ||||| |||| Sbjct: 603 cggctcgggcttgggctctggcttcggttcgggttttggcatcggtttaggctcaggctt 544 Query: 555 catcngctcgannttgngctctggctt 581 |||| ||||| ||| |||||||||| Sbjct: 543 catcggctcgggtttgggctctggctt 517 Score = 119 bits (60), Expect = 1e-23 Identities = 122/144 (84%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 255 ggctctggctttggttcaggttttggcatgggctcaggtttgggctcaggtttcggttct 196 Query: 453 ggntttggcatnggctctggcttgggttcanngttttggcatcggctcgngctngggctc 512 || || ||||| ||||| || || ||||| |||| |||||||||||| ||| ||| || Sbjct: 195 ggtttaggcataggctcaggtttcggttc-tggtttaggcatcggctcgggcttgggttc 137 Query: 513 tggcttcngctcgggctntggcat 536 |||||| ||||||||| |||||| Sbjct: 136 tggcttaggctcgggctttggcat 113 Score = 115 bits (58), Expect = 2e-22 Identities = 145/175 (82%), Gaps = 6/175 (3%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcatcggctc 367 |||||| ||||| ||||| ||||| ||||||||||||||||| ||||| ||| || Sbjct: 438 aggcttaggctcaggtttgggcatggggtaaggcttgggctcaggctt------cggttc 385 Query: 368 gggcttaggctccggctttggcatcggctctggcttgggttcaggttttggcatcggctc 427 ||| || ||| ||||| ||| | ||||||||||| ||||| ||||||||||||||||| Sbjct: 384 gggtttcggcatcggctcgggcttgggctctggctttggttcgggttttggcatcggctc 325 Query: 428 gggtttgggctctggcttcggttcaggntttggcatnggctctggcttgggttca 482 ||| || ||||||||||| ||||| || |||||||| ||||| ||||||| |||| Sbjct: 324 gggcttaggctctggctttggttcgggttttggcatcggctcgggcttggcttca 270 Score = 111 bits (56), Expect = 3e-21 Identities = 78/86 (90%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 527 ggctctggctttggttcgggttttggcatcggctctggtttgggctctggctttggttcg 468 Query: 453 ggntttggcatnggctctggcttggg 478 || |||||||| |||||||| ||||| Sbjct: 467 ggttttggcatcggctctggtttggg 442 Score = 85.7 bits (43), Expect = 1e-13 Identities = 68/77 (88%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 79 ggctctggctttggttcaggttttggcatgggctcaggtttgggctcaggtttcggttct 20 Query: 453 ggntttggcatnggctc 469 || || ||||| ||||| Sbjct: 19 ggtttaggcataggctc 3 Score = 83.8 bits (42), Expect = 6e-13 Identities = 55/60 (91%) Strand = Plus / Minus Query: 419 catcggctcgggtttgggctctggcttcggttcaggntttggcatnggctctggcttggg 478 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 543 catcggctcgggtttgggctctggctttggttcgggttttggcatcggctctggtttggg 484 Score = 79.8 bits (40), Expect = 9e-12 Identities = 63/71 (88%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || ||| Sbjct: 485 ggctctggctttggttcgggttttggcatcggctctggtttgggctcaggcttaggctca 426 Query: 453 ggntttggcat 463 || || ||||| Sbjct: 425 ggtttgggcat 415 Score = 79.8 bits (40), Expect = 9e-12 Identities = 92/110 (83%), Gaps = 10/110 (9%) Strand = Plus / Minus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttggcatcggctcg 428 ||||||||||| ||||||||||||||||| ||||||| |||| ||||| ||| Sbjct: 135 ggcttaggctcgggctttggcatcggctccggcttggcttca----ttggc------tcg 86 Query: 429 ggtttgggctctggcttcggttcaggntttggcatnggctctggcttggg 478 ||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 85 ggtttgggctctggctttggttcaggttttggcatgggctcaggtttggg 36 Score = 75.8 bits (38), Expect = 1e-10 Identities = 51/56 (91%) Strand = Plus / Minus Query: 423 ggctcgggtttgggctctggcttcggttcaggntttggcatnggctctggcttggg 478 ||||||||||||||||||||||| |||||||| |||||||| ||||| || ||||| Sbjct: 267 ggctcgggtttgggctctggctttggttcaggttttggcatgggctcaggtttggg 212 Score = 75.8 bits (38), Expect = 1e-10 Identities = 81/96 (84%) Strand = Plus / Minus Query: 387 ggcatcggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttc 446 ||||| ||||| || || ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 189 ggcataggctcaggtttcggttctggtttaggcatcggctcgggcttgggttctggctta 130 Query: 447 ggttcaggntttggcatnggctctggcttgggttca 482 || || || |||||||| ||||| ||||||| |||| Sbjct: 129 ggctcgggctttggcatcggctccggcttggcttca 94 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttggcatt-gggtaaggcttgggctctggctttggcatcggct 366 ||||||||||||||| ||||||||| || | ||||| ||||| |||||||||||||||| Sbjct: 689 aggcttgggctctggctttggcattcggctcgggcttaggctccggctttggcatcggct 630 Query: 367 cgggcttaggctc-cggctttggcatcggctctggcttggg 406 | ||||| || || || |||||| ||||||| |||||||| Sbjct: 629 ctggcttgggktcagggttttggcctcggctcgggcttggg 589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 71/86 (82%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttca 452 ||||| ||||| || |||||||| ||||| || | || |||||||| ||||||||||| Sbjct: 443 ggctcaggcttaggctcaggtttgggcatggggtaaggcttgggctcaggcttcggttcg 384 Query: 453 ggntttggcatnggctctggcttggg 478 || || ||||| ||||| |||||||| Sbjct: 383 ggtttcggcatcggctcgggcttggg 358 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngctngggctctggctt 518 ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 359 ggctctggctttggttc-gggttttggcatcggctcgggcttaggctctggctt 307 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 393 ggctctggcttgggttcaggttttggcatcgg 424 ||||||||||| ||||| |||||||||||||| Sbjct: 590 ggctctggcttcggttcgggttttggcatcgg 559 Score = 48.1 bits (24), Expect = 0.032 Identities = 31/34 (91%) Strand = Plus / Minus Query: 485 gttttggcatcggctcgngctngggctctggctt 518 |||| |||||||||||| ||| |||||||||||| Sbjct: 382 gtttcggcatcggctcgggcttgggctctggctt 349 Score = 44.1 bits (22), Expect = 0.51 Identities = 90/110 (81%), Gaps = 2/110 (1%) Strand = Plus / Minus Query: 278 aggcttgggctctggcttaggca-tgggttgaggcttgggctctggttttggcattgggt 336 |||||||||||||||||| |||| | || | ||||| ||||| || |||||||| || | Sbjct: 689 aggcttgggctctggctttggcattcggctcgggcttaggctccggctttggcatcggct 630 Query: 337 aaggcttgggctc-tggctttggcatcggctcgggcttaggctccggctt 385 |||||||| || || |||||| ||||||||||||| ||||| ||||| Sbjct: 629 ctggcttgggktcagggttttggcctcggctcgggcttgggctctggctt 580 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngctngggctctggctt 518 ||||||||||| ||||| |||||||||||||||| | | |||||||||||| Sbjct: 527 ggctctggctttggttc-gggttttggcatcggctctggtttgggctctggctt 475 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcagg 412 ||||| ||||| || || || ||||||||||||||||| ||||| ||||| Sbjct: 485 ggctctggctttggttcgggttttggcatcggctctggtttgggctcagg 436 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 267 ggttcgggttcaggcttgggctctggcttaggcatgggttgaggcttgggctc 319 |||| ||| |||||||| ||||| || || |||||||| | |||||||||||| Sbjct: 449 ggtttgggctcaggcttaggctcaggtttgggcatggggtaaggcttgggctc 397 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttggg 406 ||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 527 ggctctggctttggttcgggttttggcatcggctctggtttggg 484 Score = 40.1 bits (20), Expect = 7.9 Identities = 36/41 (87%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 465 ggctctggcttgggttcanngttttggcatcggctcgngct 505 ||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 317 ggctctggctttggttc-gggttttggcatcggctcgggct 278
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/66 (84%) Strand = Plus / Plus Query: 396 tctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggn 455 |||||||| || |||||||| ||| |||||| ||||| |||||||||||||| || || Sbjct: 83779 tctggcttaggctcaggtttaggctccggctcaggttttggctctggcttcggctccggt 83838 Query: 456 tttggc 461 |||||| Sbjct: 83839 tttggc 83844 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 392 cggctctggcttgggttcaggttttggc 419 ||||||||||||||| |||||||||||| Sbjct: 83937 cggctctggcttgggctcaggttttggc 83964 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 303 ggttgaggcttgggctctggttttggcattgggtaaggcttgggctctggctttgg 358 |||| |||||| ||||||||||||||| || | |||||||||||||||||||| Sbjct: 83074 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 83129 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 333 gggtaaggcttgggctctggctttggcatcggctcgggcttaggct 378 ||||| ||||||||||| ||||||||| | ||||| ||||| |||| Sbjct: 83452 gggtatggcttgggctcaggctttggctttggctctggctttggct 83497 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttgg 418 ||||| ||||| ||||||||| | ||||||||||| || || |||||||| Sbjct: 83320 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 83369 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctttgg 388 ||||||||||| ||||||||| | ||||| ||||| ||||| || ||||| Sbjct: 83320 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 83369 Score = 44.1 bits (22), Expect = 0.51 Identities = 30/33 (90%) Strand = Plus / Plus Query: 429 ggtttgggctctggcttcggttcaggntttggc 461 |||||||||||||| || |||||||| |||||| Sbjct: 83182 ggtttgggctctggttttggttcaggctttggc 83214 Score = 44.1 bits (22), Expect = 0.51 Identities = 41/48 (85%) Strand = Plus / Plus Query: 435 ggctctggcttcggttcaggntttggcatnggctctggcttgggttca 482 ||||| |||||||||||||| | |||| | |||||||| || |||||| Sbjct: 58336 ggctcgggcttcggttcaggctctggctttggctctggttttggttca 58383 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttttggc 419 ||||| ||||| |||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 83326 ggctcaggctttggctttggctctggctttggctctggttttggttcaggttttggc 83382 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 361 tcggctcgggcttaggctccggctttggcatcggctctggcttgggttc 409 ||||||| || || |||||||||| |||| | ||||||||||| ||||| Sbjct: 83084 tcggctctggttttggctccggctgtggcttgggctctggctttggttc 83132 Score = 42.1 bits (21), Expect = 2.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 429 ggtttgggctctggcttcggttcaggntttggcatnggctctggctt 475 ||||||||||| || |||||||| || | |||| | ||||||||||| Sbjct: 58534 ggtttgggctccggtttcggttctgggtgtggcttaggctctggctt 58580 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttt 415 ||||||||||| || || |||| |||| | |||||||| || ||||||||||| Sbjct: 58336 ggctcgggcttcggttcaggctctggctttggctctggttttggttcaggttt 58388 Score = 40.1 bits (20), Expect = 7.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 309 ggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcatcggctcg 368 ||||||||||| ||||||||| | || | ||| | |||| |||||||||| ||||||| Sbjct: 83944 ggcttgggctcaggttttggcgtgggtttaggatgaggctttggctttggcttcggctcc 84003 Query: 369 ggct 372 |||| Sbjct: 84004 ggct 84007 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 273 ggttcaggcttgggctctggcttaggcatgggttgaggcttgggctctggttttgg 328 ||||||||||| |||||||| || ||| || || |||||||||||||| ||||| Sbjct: 83074 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 83129
>gb|AY224438.1| Oryza sativa (japonica cultivar-group) isolate 23221 proline-rich protein mRNA, complete cds Length = 1251 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/66 (84%) Strand = Plus / Minus Query: 396 tctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggn 455 |||||||| || |||||||| ||| |||||| ||||| |||||||||||||| || || Sbjct: 392 tctggcttaggctcaggtttaggctccggctcaggttttggctctggcttcggctccggt 333 Query: 456 tttggc 461 |||||| Sbjct: 332 tttggc 327 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 303 ggttgaggcttgggctctggttttggcattgggtaaggcttgggctctggctttgg 358 |||| |||||| ||||||||||||||| || | |||||||||||||||||||| Sbjct: 1097 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 1042 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 392 cggctctggcttgggttcaggttttggc 419 ||||||||||||||| |||||||||||| Sbjct: 234 cggctctggcttgggctcaggttttggc 207 Score = 44.1 bits (22), Expect = 0.51 Identities = 30/33 (90%) Strand = Plus / Minus Query: 429 ggtttgggctctggcttcggttcaggntttggc 461 |||||||||||||| || |||||||| |||||| Sbjct: 989 ggtttgggctctggttttggttcaggctttggc 957 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctttgg 388 ||||||||||| ||||||||| | ||||| ||||| ||||| || ||||| Sbjct: 851 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 802 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttgg 418 ||||| ||||| ||||||||| | ||||||||||| || || |||||||| Sbjct: 851 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 802 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 333 gggtaaggcttgggctctggctttggcatcggctcgggcttaggct 378 ||||| ||||||||||| ||||||||| | ||||| ||||| |||| Sbjct: 719 gggtatggcttgggctcaggctttggctttggctctggctttggct 674 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Minus Query: 361 tcggctcgggcttaggctccggctttggcatcggctctggcttgggttc 409 ||||||| || || |||||||||| |||| | ||||||||||| ||||| Sbjct: 1087 tcggctctggttttggctccggctgtggcttgggctctggctttggttc 1039 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttttggc 419 ||||| ||||| |||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 845 ggctcaggctttggctttggctctggctttggctctggttttggttcaggttttggc 789 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 273 ggttcaggcttgggctctggcttaggcatgggttgaggcttgggctctggttttgg 328 ||||||||||| |||||||| || ||| || || |||||||||||||| ||||| Sbjct: 1097 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 1042 Score = 40.1 bits (20), Expect = 7.9 Identities = 53/64 (82%) Strand = Plus / Minus Query: 309 ggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcatcggctcg 368 ||||||||||| ||||||||| | || | ||| | |||| |||||||||| ||||||| Sbjct: 227 ggcttgggctcaggttttggcgtgggtttaggatgaggctttggctttggcttcggctcc 168 Query: 369 ggct 372 |||| Sbjct: 167 ggct 164
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 56/66 (84%) Strand = Plus / Plus Query: 396 tctggcttgggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggn 455 |||||||| || |||||||| ||| |||||| ||||| |||||||||||||| || || Sbjct: 7647384 tctggcttaggctcaggtttaggctccggctcaggttttggctctggcttcggctccggt 7647443 Query: 456 tttggc 461 |||||| Sbjct: 7647444 tttggc 7647449 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 392 cggctctggcttgggttcaggttttggc 419 ||||||||||||||| |||||||||||| Sbjct: 7647542 cggctctggcttgggctcaggttttggc 7647569 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 303 ggttgaggcttgggctctggttttggcattgggtaaggcttgggctctggctttgg 358 |||| |||||| ||||||||||||||| || | |||||||||||||||||||| Sbjct: 7646679 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 7646734 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 333 gggtaaggcttgggctctggctttggcatcggctcgggcttaggct 378 ||||| ||||||||||| ||||||||| | ||||| ||||| |||| Sbjct: 7647057 gggtatggcttgggctcaggctttggctttggctctggctttggct 7647102 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttgg 418 ||||| ||||| ||||||||| | ||||||||||| || || |||||||| Sbjct: 7646925 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 7646974 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctttgg 388 ||||||||||| ||||||||| | ||||| ||||| ||||| || ||||| Sbjct: 7646925 ggcttgggctcaggctttggctttggctctggctttggctctggttttgg 7646974 Score = 44.1 bits (22), Expect = 0.51 Identities = 30/33 (90%) Strand = Plus / Plus Query: 429 ggtttgggctctggcttcggttcaggntttggc 461 |||||||||||||| || |||||||| |||||| Sbjct: 7646787 ggtttgggctctggttttggttcaggctttggc 7646819 Score = 44.1 bits (22), Expect = 0.51 Identities = 41/48 (85%) Strand = Plus / Plus Query: 435 ggctctggcttcggttcaggntttggcatnggctctggcttgggttca 482 ||||| |||||||||||||| | |||| | |||||||| || |||||| Sbjct: 7621941 ggctcgggcttcggttcaggctctggctttggctctggttttggttca 7621988 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttttggc 419 ||||| ||||| |||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 7646931 ggctcaggctttggctttggctctggctttggctctggttttggttcaggttttggc 7646987 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 361 tcggctcgggcttaggctccggctttggcatcggctctggcttgggttc 409 ||||||| || || |||||||||| |||| | ||||||||||| ||||| Sbjct: 7646689 tcggctctggttttggctccggctgtggcttgggctctggctttggttc 7646737 Score = 42.1 bits (21), Expect = 2.0 Identities = 40/47 (85%) Strand = Plus / Plus Query: 429 ggtttgggctctggcttcggttcaggntttggcatnggctctggctt 475 ||||||||||| || |||||||| || | |||| | ||||||||||| Sbjct: 7622139 ggtttgggctccggtttcggttctgggtgtggcttaggctctggctt 7622185 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttt 415 ||||||||||| || || |||| |||| | |||||||| || ||||||||||| Sbjct: 7621941 ggctcgggcttcggttcaggctctggctttggctctggttttggttcaggttt 7621993 Score = 40.1 bits (20), Expect = 7.9 Identities = 53/64 (82%) Strand = Plus / Plus Query: 309 ggcttgggctctggttttggcattgggtaaggcttgggctctggctttggcatcggctcg 368 ||||||||||| ||||||||| | || | ||| | |||| |||||||||| ||||||| Sbjct: 7647549 ggcttgggctcaggttttggcgtgggtttaggatgaggctttggctttggcttcggctcc 7647608 Query: 369 ggct 372 |||| Sbjct: 7647609 ggct 7647612 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 273 ggttcaggcttgggctctggcttaggcatgggttgaggcttgggctctggttttgg 328 ||||||||||| |||||||| || ||| || || |||||||||||||| ||||| Sbjct: 7646679 ggttcaggcttcggctctggttttggctccggctgtggcttgggctctggctttgg 7646734
>gb|AF331853.1| Saccharum hybrid cultivar CP72-2086 proline-rich protein mRNA, partial sequence Length = 1173 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 255 ggctccggcttgggttcgggttcaggcttgggctctggctt 295 ||||| || ||||||| ||||||||||||||||| |||||| Sbjct: 732 ggctctggtttgggtttgggttcaggcttgggctttggctt 692 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 423 ggctcgggtttgggctctggcttcggttcagg 454 |||||||| || |||||||||||||||||||| Sbjct: 846 ggctcgggcttaggctctggcttcggttcagg 815 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Minus Query: 273 ggttcaggcttgggctctggcttaggcatgggttgaggcttgggct 318 ||||||||||| |||||||| || || |||||| ||||||||||| Sbjct: 744 ggttcaggctttggctctggtttgggtttgggttcaggcttgggct 699 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Minus Query: 252 ggcggctccggcttgggttcgggttcaggcttgggctctggcttaggcatgggttgaggc 311 ||||| || ||||| |||| ||| ||||||||||| || |||| ||| | ||||| ||| Sbjct: 963 ggcgggtcgggctttggtttgggctcaggcttgggttcgggctcaggttttggttggggc 904 Query: 312 ttgggctctggttttgg 328 || ||||| |||||||| Sbjct: 903 ttaggctccggttttgg 887 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 ttgggttcgggttcaggcttgggctctggcttaggca 300 ||||||| ||| ||||||||||||||||||| |||| Sbjct: 621 ttgggttttggtccaggcttgggctctggcttcggca 585
>ref|NM_128161.1| Arabidopsis thaliana PDF1.2b AT2G26020 (PDF1.2b) mRNA, complete cds Length = 274 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 18 acaaagtagtaataatcatcatgg 41 |||||||||||||||||||||||| Sbjct: 12 acaaagtagtaataatcatcatgg 35
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 18 acaaagtagtaataatcatcatgg 41 |||||||||||||||||||||||| Sbjct: 55234 acaaagtagtaataatcatcatgg 55211
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 423 ggctcgggtttgggctctggcttcggttcag 453 |||||||| |||||||| ||||||||||||| Sbjct: 381383 ggctcgggcttgggctcgggcttcggttcag 381353
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 248 cggaggcggctccggcttgggttcggg 274 ||||||||||||||||||||| ||||| Sbjct: 3480480 cggaggcggctccggcttgggctcggg 3480506
>gb|AC163706.2| Gallus gallus BAC clone CH261-71A16 from chromosome w, complete sequence Length = 206206 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 57 gaaactaaaaagggatgatggaatacaagga 87 ||||||||| |||||||||||||||||||| Sbjct: 113780 gaaactaaactgggatgatggaatacaagga 113810
>emb|Y17332.1|ZMPROPR Zea mays mRNA for proline-rich protein Length = 1471 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttggcatcggctcg 428 ||||||||||| |||||||| ||||||||||| || || ||||| || ||||||| Sbjct: 905 ggcttaggctctggctttggttgtggctctggctttggatctggtttcggtttcggctca 846 Query: 429 ggtttgggctctggcttcggttc 451 || || ||||||||||| ||||| Sbjct: 845 ggctttggctctggcttaggttc 823 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 tcgggcttaggctccggctttggc 389 |||||||||||||| ||||||||| Sbjct: 944 tcgggcttaggctctggctttggc 921 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 tcgggcttaggctccggctttggc 389 |||||||||||||| ||||||||| Sbjct: 776 tcgggcttaggctctggctttggc 753
>emb|AJ130830.1|ZMA130830 Zea mays gene encoding putative cell wall protein Length = 1792 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 369 ggcttaggctccggctttggcatcggctctggcttgggttcaggttttggcatcggctcg 428 ||||||||||| |||||||| ||||||||||| || || ||||| || ||||||| Sbjct: 885 ggcttaggctctggctttggttgtggctctggctttggatctggtttcggtttcggctca 826 Query: 429 ggtttgggctctggcttcggttc 451 || || ||||||||||| ||||| Sbjct: 825 ggctttggctctggcttaggttc 803 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 tcgggcttaggctccggctttggc 389 |||||||||||||| ||||||||| Sbjct: 924 tcgggcttaggctctggctttggc 901 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 tcgggcttaggctccggctttggc 389 |||||||||||||| ||||||||| Sbjct: 756 tcgggcttaggctctggctttggc 733
>gb|AC009159.12| Homo sapiens chromosome 16 clone RP11-70D24, complete sequence Length = 165921 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 tggcattgggtaaggcttgggc 347 |||||||||||||||||||||| Sbjct: 124291 tggcattgggtaaggcttgggc 124312
>emb|AJ720719.1| Gallus gallus mRNA for hypothetical protein, clone 24a7 Length = 840 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 tggcttgggttcaggttttggc 419 |||||||||||||||||||||| Sbjct: 207 tggcttgggttcaggttttggc 186
>ref|NM_001006412.1| Gallus gallus high mobility group nucleosomal binding domain 3 (HMGN3), mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 tggcttgggttcaggttttggc 419 |||||||||||||||||||||| Sbjct: 207 tggcttgggttcaggttttggc 186
>dbj|AK100217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045I16, full insert sequence Length = 1510 Score = 44.1 bits (22), Expect = 0.51 Identities = 41/48 (85%) Strand = Plus / Minus Query: 435 ggctctggcttcggttcaggntttggcatnggctctggcttgggttca 482 ||||| |||||||||||||| | |||| | |||||||| || |||||| Sbjct: 843 ggctcgggcttcggttcaggctctggctttggctctggttttggttca 796 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttt 415 ||||||||||| || || |||| |||| | |||||||| || ||||||||||| Sbjct: 843 ggctcgggcttcggttcaggctctggctttggctctggttttggttcaggttt 791 Score = 42.1 bits (21), Expect = 2.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 429 ggtttgggctctggcttcggttcaggntttggcatnggctctggctt 475 ||||||||||| || |||||||| || | |||| | ||||||||||| Sbjct: 645 ggtttgggctccggtttcggttctgggtgtggcttaggctctggctt 599
>gb|AF337054.1| Oryza sativa repetitive proline rich protein mRNA, complete cds Length = 1493 Score = 44.1 bits (22), Expect = 0.51 Identities = 41/48 (85%) Strand = Plus / Minus Query: 435 ggctctggcttcggttcaggntttggcatnggctctggcttgggttca 482 ||||| |||||||||||||| | |||| | |||||||| || |||||| Sbjct: 812 ggctcgggcttcggttcaggctctggctttggctctggttttggttca 765 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttt 415 ||||||||||| || || |||| |||| | |||||||| || ||||||||||| Sbjct: 812 ggctcgggcttcggttcaggctctggctttggctctggttttggttcaggttt 760 Score = 42.1 bits (21), Expect = 2.0 Identities = 40/47 (85%) Strand = Plus / Minus Query: 429 ggtttgggctctggcttcggttcaggntttggcatnggctctggctt 475 ||||||||||| || |||||||| || | |||| | ||||||||||| Sbjct: 614 ggtttgggctccggtttcggttctgggtgtggcttaggctctggctt 568
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 257 ctccggcttgggttcgggttcaggcttggg 286 |||||||||||||| ||| ||||||||||| Sbjct: 2710023 ctccggcttgggtttgggctcaggcttggg 2710052
>ref|XM_515163.1| PREDICTED: Pan troglodytes similar to D-PCa-2 protein isoform c; Dresden prostate cancer 2; Dresden prostate carcinoma 2 (LOC458871), mRNA Length = 388 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 123 aggcttgggctctggctttgg 103
>ref|XM_530683.1| PREDICTED: Pan troglodytes LOC460985 (LOC460985), mRNA Length = 902 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 626 aggcttgggctctggctttgg 646
>ref|NM_005517.2| Homo sapiens high-mobility group nucleosomal binding domain 2 (HMGN2), mRNA Length = 1306 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 313 aggcttgggctctggctttgg 293
>ref|XM_516308.1| PREDICTED: Pan troglodytes similar to 2-hydroxyphytanoyl-CoA lyase (2-HPCL) (HSPC279) (LOC460203), mRNA Length = 1882 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 1732 aggcttgggctctggctttgg 1712
>ref|XM_515655.1| PREDICTED: Pan troglodytes similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC459448), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 423 aggcttgggctctggctttgg 403
>ref|XM_530248.1| PREDICTED: Pan troglodytes LOC457914 (LOC457914), mRNA Length = 922 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 622 aggcttgggctctggctttgg 642
>ref|XM_477694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 tcggctctggcttgggttcaggttttggc 419 ||||||| || |||||||||||||||||| Sbjct: 668 tcggctcaggtttgggttcaggttttggc 640
>ref|XM_530110.1| PREDICTED: Pan troglodytes LOC456663 (LOC456663), mRNA Length = 1412 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 623 aggcttgggctctggctttgg 643
>gb|BC081567.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88718 IMAGE:4131303), complete cds Length = 1230 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 211 aggcttgggctctggctttgg 191
>gb|AY704551.1| Gekko japonicus GekBS049P mRNA, complete cds Length = 1222 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 234 aggcttgggctctggctttgg 214
>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence Length = 35325 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggct 378 |||||| |||| |||||||||| | |||| ||||||||||| Sbjct: 29345 aggcttaggctttggctttggcttaggcttgggcttaggct 29305
>gb|AY627196.1| Escherichia coli isolate ECOR48 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627195.1| Escherichia coli isolate ECOR46 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627131.1| Escherichia coli isolate M2351 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627130.1| Escherichia coli isolate M2350 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627121.1| Escherichia coli isolate M2341 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627120.1| Escherichia coli isolate M2340 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627117.1| Escherichia coli isolate M2335 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627114.1| Escherichia coli isolate M2332 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|AY627110.1| Escherichia coli isolate M2328 homoserine kinase (thrB) gene, partial cds Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 199 atcggctcgggcttaggctcc 219
>gb|BC075837.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88719 IMAGE:6272425), complete cds Length = 1306 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 313 aggcttgggctctggctttgg 293
>gb|BC072010.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88720 IMAGE:6273507), complete cds Length = 1222 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 212 aggcttgggctctggctttgg 192
>gb|BC072011.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88721 IMAGE:6647282), complete cds Length = 1209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 208 aggcttgggctctggctttgg 188
>gb|BC000378.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:8383 IMAGE:2820349), complete cds Length = 1250 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 228 aggcttgggctctggctttgg 208
>gb|BC014644.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:15731 IMAGE:3355317), complete cds Length = 1231 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 208 aggcttgggctctggctttgg 188
>gb|BC003050.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:750 IMAGE:3543809), complete cds Length = 1242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 218 aggcttgggctctggctttgg 198
>gb|BC070297.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:88292 IMAGE:4282630), complete cds Length = 1181 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 176 aggcttgggctctggctttgg 156
>gb|AF377565.1| Tripsacum dactyloides clone T. anonymous genomic RFLP marker Csu1138 Length = 369 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 282 ttgggctctggcttaggcatgggttgaggcttgggctctgg 322 |||||||||||||| ||| |||| | |||||||||||||| Sbjct: 141 ttgggctctggcttgggcttgggctccggcttgggctctgg 101 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 255 ggctccggcttgggttcgggttcaggcttgggctctggctt 295 ||||| |||||||| | ||| || ||||||||||||||||| Sbjct: 138 ggctctggcttgggcttgggctccggcttgggctctggctt 98 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 342 ttgggctctggctttggcatcggctcgggcttaggctccggctttggcatcgg 394 |||||||||||||| ||| | ||||| ||||| ||||| ||||| ||| |||| Sbjct: 141 ttgggctctggcttgggcttgggctccggcttgggctctggcttgggcttcgg 89
>gb|AY434330.1| Shigella boydii strain 33 (20032) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434329.1| Shigella dysenteriae strain 29 20169 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434311.1| Shigella dysenteriae strain 21 ATCC12039 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434296.1| Shigella sonnei strain 47 20009 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434295.1| Shigella sonnei strain 46 375 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434294.1| Shigella sonnei strain 45 373 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434293.1| Shigella sonnei strain 44 20171 homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434292.1| Shigella sonnei strain 43 (20157) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434291.1| Shigella sonnei strain 42 (20149) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434290.1| Shigella sonnei strain 41 (20145) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434289.1| Shigella sonnei strain 40 (20035) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434288.1| Shigella sonnei strain 39 (20031) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>gb|AY434287.1| Shigella sonnei strain 38 (20007) homoserine kinase (thrB) gene, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 124 atcggctcgggcttaggctcc 144
>ref|XM_846735.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC609476), mRNA Length = 580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 246 aggcttgggctctggctttgg 226
>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence Length = 190381 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 152163 cggctcgggctcgggttcgggttctggctcgggctccggct 152203
>ref|XM_844334.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC607595), mRNA Length = 1096 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 666 aggcttgggctctggctttgg 646
>gb|AY518460.1| Shigella sonnei strain SS92a homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY518459.1| Shigella boydii strain SB1080 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY518456.1| Shigella boydii strain SB1156 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY459322.1| Mus musculus apoptosis repressor interacting with CARD (Nol3) mRNA, complete cds Length = 983 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 750 cggctcgggctcgggttcgggttctggctcgggctccggct 710
>gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome 14, complete sequence Length = 174986 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 80378 aggcttgggctctggctttgg 80398
>ref|XM_534124.2| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 1 (LOC476921), mRNA Length = 3110 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 2144 aggcttgggctctggctttgg 2124
>ref|XM_843311.1| PREDICTED: Canis familiaris similar to L-plastin (Lymphocyte cytosolic protein 1) (LCP-1) (LC64P), transcript variant 2 (LOC476921), mRNA Length = 3116 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 2150 aggcttgggctctggctttgg 2130
>ref|XM_847544.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC610127), mRNA Length = 462 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 220 aggcttgggctctggctttgg 200
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 tcggctcgggcttaggctccggctt 385 |||||||||||||||| |||||||| Sbjct: 2029148 tcggctcgggcttaggttccggctt 2029172
>gb|AY132958.1| Escherichia coli strain ECOR49 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132957.1| Escherichia coli strain ECOR47 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132956.1| Escherichia coli strain ECOR46 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132948.1| Escherichia coli strain ECOR57 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132947.1| Escherichia coli strain ECOR52 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132946.1| Escherichia coli strain ECOR51 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|AY132938.1| Escherichia coli strain ECOR24 homoserine kinase (thrB) gene, partial cds Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 217 atcggctcgggcttaggctcc 237
>gb|BC075848.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:4581619), **** WARNING: chimeric clone **** Length = 3796 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 2797 aggcttgggctctggctttgg 2777
>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence Length = 193083 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 113786 cggctcgggctcgggttcgggttctggctcgggctccggct 113826
>ref|XM_847200.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC609853), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 223 aggcttgggctctggctttgg 203
>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215077 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 96392 aggcttgggctctggctttgg 96372
>emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, complete sequence Length = 165027 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttggcatcggctcgggcttaggct 378 |||||| ||||| ||||| ||| | |||||||||||||||| Sbjct: 28140 aggcttaggctcgggcttaggcttaggctcgggcttaggct 28100
>emb|AL121990.34|HSDJ613A2 Human DNA sequence from clone RP4-613A2 on chromosome 1q42.11-42.3 Contains the 5' end of the NUP133 gene, a novel gene, the ABCB10 gene for ATP-binding cassette, sub-family B (MDR/TAP), member 10, a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene, the TAF5L gene for TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, the 5' end of a novel gene (KIAA0133) and three CpG islands, complete sequence Length = 147913 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 aggcttgggctctggttttgg 328 ||||||||||||||||||||| Sbjct: 84668 aggcttgggctctggttttgg 84648
>ref|XM_845631.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC608920), mRNA Length = 1198 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 223 aggcttgggctctggctttgg 203
>ref|XM_845691.1| PREDICTED: Canis familiaris similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC608614), mRNA Length = 1535 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 576 aggcttgggctctggctttgg 556
>gb|BC063551.1| Homo sapiens TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4779792), complete cds Length = 1363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 456 aggcttgggctctggctttgg 436
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 3785 atcggctcgggcttaggctcc 3805
>gb|BC001783.1| Homo sapiens mRNA similar to ribosomal protein L35a (cDNA clone IMAGE:3355533) Length = 4331 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 3027 aggcttgggctctggctttgg 3047
>gb|AF519487.1| Streptococcus equi subsp. zooepidemicus Szp protein gene, complete cds Length = 1099 Score = 42.1 bits (21), Expect = 2.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 405 ggttcaggttttggcatcggctcgggtttgggctctggcttcggttcaggntttgg 460 |||| |||||||||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct: 894 ggttgaggttttggcttaggttctggttttggctctggcttaggctcaggttttgg 839
>emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 on chromosome 22, complete sequence Length = 122320 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 104520 aggcttgggctctggctttgg 104540
>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete sequence Length = 177568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 56316 aggcttgggctctggctttgg 56296
>emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on chromosome 1 Contains a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene and the KRTCAP2 gene for keratinocyte associated protein 2, complete sequence Length = 32360 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 6843 aggcttgggctctggctttgg 6823
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 40227 aggcttgggctctggctttgg 40247
>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the 5' end of the CBARA1 gene for calcium binding atopy-related autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase subunit VIIc (COX7C) pseudogene, a novel gene, a novel pseudogene (FLJ12684) and a CpG island, complete sequence Length = 163632 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 137312 aggcttgggctctggctttgg 137332
>emb|AL390838.26| Human DNA sequence from clone RP11-158D2 on chromosome 9 Contains a novel pseudogene and a novel gene, complete sequence Length = 193709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 63970 aggcttgggctctggctttgg 63950
>ref|NM_030152.2| Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA Length = 2870 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 743 cggctcgggctcgggttcgggttctggctcgggctccggct 703
>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a high-mobility group pseudogene, complete sequence Length = 162763 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 140895 aggcttgggctctggctttgg 140875
>emb|AL139415.10| Human DNA sequence from clone RP3-477M7 on chromosome 1 Contains the ENO1 gene for enolase 1 (alpha), two novel genes, a novel pseudogene, a pseudogene similar to part of a Zinc finger protein, a pseudogene similar to part of cytochrome oxidase subunit II, the CA6 gene for carbonic anhydrase VI and a CpG island, complete sequence Length = 141428 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 39050 aggcttgggctctggctttgg 39030
>emb|CR859118.1| Pongo pygmaeus mRNA; cDNA DKFZp468C094 (from clone DKFZp468C094) Length = 1221 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 231 aggcttgggctctggctttgg 211
>emb|AL646002.6| Mouse DNA sequence from clone RP23-237P10 on chromosome 11 Contains gene D930008C07Rik, the Canx gene for calnexin, a high mobility group nucleosomal binding domain 2 (Hmgn2) pseudogene and two CpG islands, complete sequence Length = 113907 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 105281 aggcttgggctctggctttgg 105261
>gb|BC065440.1| Danio rerio zgc:77724, mRNA (cDNA clone MGC:77724 IMAGE:7000695), complete cds Length = 1363 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggctt 403 ||||| ||||| ||||||||||||||| | |||||||||| Sbjct: 1009 ggctctggctttggctccggctttggctccagctctggctt 1049
>ref|NM_213210.1| Danio rerio zgc:77724 (zgc:77724), mRNA Length = 1363 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggctt 403 ||||| ||||| ||||||||||||||| | |||||||||| Sbjct: 1009 ggctctggctttggctccggctttggctccagctctggctt 1049
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 215031 cggctcgggctcgggttcgggttctggctcgggctccggct 215071
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ggcttgggctctggttttggc 329 ||||||||||||||||||||| Sbjct: 2958492 ggcttgggctctggttttggc 2958512
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ggcttgggctctggttttggc 329 ||||||||||||||||||||| Sbjct: 1056648 ggcttgggctctggttttggc 1056668
>emb|CR624609.1| full-length cDNA clone CS0CAP008YJ21 of Thymus of Homo sapiens (human) Length = 1138 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 202 aggcttgggctctggctttgg 182
>emb|CR624004.1| full-length cDNA clone CS0DI075YK09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1142 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 208 aggcttgggctctggctttgg 188
>emb|CR622123.1| full-length cDNA clone CS0DL009YG08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 240 aggcttgggctctggctttgg 220
>emb|CR621179.1| full-length cDNA clone CS0DI055YJ13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 215 aggcttgggctctggctttgg 195
>emb|CR619884.1| full-length cDNA clone CS0DJ013YC12 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1305 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 419 aggcttgggctctggctttgg 399
>emb|CR614459.1| full-length cDNA clone CS0DM006YI10 of Fetal liver of Homo sapiens (human) Length = 1159 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 222 aggcttgggctctggctttgg 202
>emb|CR612973.1| full-length cDNA clone CL0BA002ZH08 of Placenta of Homo sapiens (human) Length = 1119 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 211 aggcttgggctctggctttgg 191
>emb|CR611141.1| full-length cDNA clone CS0CAP003YB16 of Thymus of Homo sapiens (human) Length = 1173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 218 aggcttgggctctggctttgg 198
>emb|CR609228.1| full-length cDNA clone CS0DF002YD20 of Fetal brain of Homo sapiens (human) Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 689 aggcttgggctctggctttgg 669
>emb|CR608465.1| full-length cDNA clone CL0BA008ZE05 of Placenta of Homo sapiens (human) Length = 1180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 211 aggcttgggctctggctttgg 191
>emb|CR607698.1| full-length cDNA clone CS0CAP006YC12 of Thymus of Homo sapiens (human) Length = 1153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 218 aggcttgggctctggctttgg 198
>emb|CR606135.1| full-length cDNA clone CS0DD003YG22 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1162 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 213 aggcttgggctctggctttgg 193
>emb|CR605166.1| full-length cDNA clone CL0BA011ZG12 of Placenta of Homo sapiens (human) Length = 1184 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 215 aggcttgggctctggctttgg 195
>emb|CR602382.1| full-length cDNA clone CS0DB001YD15 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 213 aggcttgggctctggctttgg 193
>emb|CR599316.1| full-length cDNA clone CS0CAP006YG17 of Thymus of Homo sapiens (human) Length = 1174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 216 aggcttgggctctggctttgg 196
>emb|CR598323.1| full-length cDNA clone CS0CAP004YI14 of Thymus of Homo sapiens (human) Length = 1164 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 216 aggcttgggctctggctttgg 196
>emb|CR596866.1| full-length cDNA clone CS0DH005YD16 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1184 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 215 aggcttgggctctggctttgg 195
>emb|CR595538.1| full-length cDNA clone CS0DC025YM12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 240 aggcttgggctctggctttgg 220
>emb|CR595467.1| full-length cDNA clone CL0BB010ZB04 of Neuroblastoma of Homo sapiens (human) Length = 1127 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 211 aggcttgggctctggctttgg 191
>emb|CR593313.1| full-length cDNA clone CS0DI020YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1157 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 215 aggcttgggctctggctttgg 195
>emb|CR592727.1| full-length cDNA clone CS0DI051YN20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1167 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 219 aggcttgggctctggctttgg 199
>emb|CR590834.1| full-length cDNA clone CS0DI082YF23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 155 aggcttgggctctggctttgg 135
>emb|CR590487.1| full-length cDNA clone CS0DD005YI07 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 281 aggcttgggctctggctttgg 261
>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence Length = 142374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 94281 aggcttgggctctggctttgg 94301
>gb|AC022394.7| Homo sapiens chromosome 10 clone RP11-325M24, complete sequence Length = 154064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 124779 aggcttgggctctggctttgg 124759
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence Length = 188117 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 86341 aggcttgggctctggctttgg 86321
>dbj|AK136964.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430017G04 product:unclassifiable, full insert sequence Length = 2832 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 1732 aggcttgggctctggctttgg 1752
>gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, complete sequence Length = 192169 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 156983 aggcttgggctctggctttgg 156963
>ref|XM_937222.1| PREDICTED: Homo sapiens similar to TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (LOC653961), mRNA Length = 1826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 929 aggcttgggctctggctttgg 909
>ref|XM_945624.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 3 (LOC649445), mRNA Length = 1214 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>ref|XM_945621.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 2 (LOC649445), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>ref|XM_942006.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 1 (LOC649445), mRNA Length = 1221 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>ref|XM_929021.1| PREDICTED: Homo sapiens similar to TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (LOC653695), mRNA Length = 1826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 929 aggcttgggctctggctttgg 909
>ref|XM_933938.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 3 (LOC643872), mRNA Length = 1214 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>ref|XM_933937.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 2 (LOC643872), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>ref|XM_929731.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2), transcript variant 1 (LOC643872), mRNA Length = 1221 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 237 aggcttgggctctggctttgg 217
>gb|AY961377.1| Arabidopsis halleri putative plant defensin PDF1.2 mRNA, complete cds Length = 432 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 aagtagtaataatcatcatgg 41 ||||||||||||||||||||| Sbjct: 21 aagtagtaataatcatcatgg 41
>gb|AY961376.1| Arabidopsis halleri putative plant defensin PDF1.1 mRNA, complete cds Length = 431 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 aagtagtaataatcatcatgg 41 ||||||||||||||||||||| Sbjct: 23 aagtagtaataatcatcatgg 43
>ref|XM_927624.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC644498), mRNA Length = 440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 230 aggcttgggctctggctttgg 210
>ref|XM_939591.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC650503), mRNA Length = 440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 230 aggcttgggctctggctttgg 210
>ref|XM_941943.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC652483), mRNA Length = 696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 444 aggcttgggctctggctttgg 424
>ref|XM_930287.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC647242), mRNA Length = 696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 444 aggcttgggctctggctttgg 424
>ref|XM_937902.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC648822), mRNA Length = 525 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 123 aggcttgggctctggctttgg 103
>ref|XM_937758.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC148915), mRNA Length = 1568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 582 aggcttgggctctggctttgg 562
>ref|XM_086360.6| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-17 (High-mobility group nucleosome binding domain 2) (LOC148915), mRNA Length = 1568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 582 aggcttgggctctggctttgg 562
>gb|AF293265.1|AF293265 Escherichia coli isolate ECOR54 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293263.1|AF293263 Escherichia coli isolate M1367_D10 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293260.1|AF293260 Escherichia coli isolate M1353_B17 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293259.1|AF293259 Escherichia coli isolate M1368_B9 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293258.1|AF293258 Escherichia coli isolate M1358_B15 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293257.1|AF293257 Escherichia coli isolate M1344_B5 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293256.1|AF293256 Escherichia coli isolate M1381_D2 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293255.1|AF293255 Escherichia coli isolate M1347_B7 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293254.1|AF293254 Escherichia coli isolate M1357_B16 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293253.1|AF293253 Escherichia coli isolate M1365_B11 homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>gb|AF293227.1|AF293227 Escherichia coli isolate M1343_SS homoserine kinase (thrB) and threonine synthase (thrC) genes, partial cds Length = 2032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 208 atcggctcgggcttaggctcc 228
>emb|CR542122.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0523D for gene HMGN2, high-mobility group nucleosomal binding domain 2; complete cds, incl. stopcodon Length = 273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 123 aggcttgggctctggctttgg 103
>gb|DQ362712.1| Escherichia coli strain 44738 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362711.1| Escherichia coli strain 44825 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362693.1| Shigella dysenteriae strain G1252 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362689.1| Shigella dysenteriae strain G1292 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362688.1| Shigella boydii strain G1236 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362686.1| Shigella boydii strain G1187 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362684.1| Shigella boydii strain G1186 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362680.1| Shigella boydii strain G1214 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362679.1| Shigella boydii strain G1219 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362678.1| Shigella boydii strain G1282 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>gb|DQ362674.1| Shigella boydii strain G1191 ThrB (thrB) gene, partial cds Length = 871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 229 atcggctcgggcttaggctcc 249
>dbj|AB179399.1| Macaca fascicularis testis cDNA clone: QtsA-19263, similar to human high-mobility group nucleosomal binding domain 2(HMGN2), mRNA, RefSeq: NM_005517.1 Length = 1092 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 255 aggcttgggctctggctttgg 235
>dbj|AK079536.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230035L15 product:nucleolar protein 3 (apoptosis repressor with CARD domain) [Homo sapiens]., full insert sequence Length = 1620 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 774 cggctcgggctcgggttcgggttctggctcgggctccggct 734
>ref|NG_000892.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17-like 2 (HMG17L2) pseudogene on chromosome 22 Length = 465 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 223 aggcttgggctctggctttgg 203
>ref|NG_001142.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17 pseudogene 2 (HMG17P2) on chromosome 6 Length = 1308 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 287 aggcttgggctctggctttgg 267
>ref|NG_002646.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein 17-like 1 (HMG17L1) pseudogene on chromosome 22 Length = 1660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 619 aggcttgggctctggctttgg 599
>dbj|AK053846.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130314L04 product:apoptosis repressor with CARD domain [Homo sapiens], full insert sequence Length = 2870 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 743 cggctcgggctcgggttcgggttctggctcgggctccggct 703
>dbj|AK021023.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430311C09 product:apoptosis repressor with CARD domain [Homo sapiens], full insert sequence Length = 927 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 688 cggctcgggctcgggttcgggttctggctcgggctccggct 648
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 tcggctctggcttgggttcaggttttggc 419 ||||||| || |||||||||||||||||| Sbjct: 13313504 tcggctcaggtttgggttcaggttttggc 13313476 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 267 ggttcgggttcaggcttgggctctggcttagg 298 |||| |||||||||||| ||||| |||||||| Sbjct: 13301053 ggtttgggttcaggctttggctccggcttagg 13301084
>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene, complete cds Length = 125625 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 92962 aggcttgggctctggctttgg 92982
>gb|DQ000559.1| Synthetic construct clone PSF:109216 high mobility group protein 17 gene, complete cds Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 195 aggcttgggctctggctttgg 175
>gb|AC117394.10| Homo sapiens 3 BAC RP11-529G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 198170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 168343 aggcttgggctctggctttgg 168363 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ttcaggcttgggctctggctt 295 ||||||||||||||||||||| Sbjct: 168340 ttcaggcttgggctctggctt 168360
>gb|BC029638.1| Homo sapiens, Similar to high-mobility group (nonhistone chromosomal) protein 17, clone IMAGE:4777228, mRNA Length = 1295 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 379 aggcttgggctctggctttgg 359
>ref|NM_001003101.1| Canis familiaris non-histone chromosomal protein HMG-17 (HMG-17), mRNA Length = 656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 208 aggcttgggctctggctttgg 188
>gb|AC068538.8| Homo sapiens BAC clone RP11-141G4 from 2, complete sequence Length = 173169 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 131885 aggcttgggctctggctttgg 131905
>gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2, complete sequence Length = 158458 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 109708 aggcttgggctctggctttgg 109688
>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence Length = 173842 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 117509 aggcttgggctctggctttgg 117489
>gb|AF198109.1|AF198109 Trichomonas vaginalis eukaryotic release factor 3 GTPase subunit (erf3) gene, complete cds Length = 2242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ggcttgggctctggttttggc 329 ||||||||||||||||||||| Sbjct: 585 ggcttgggctctggttttggc 565 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 285 ggctctggcttaggcatgggttgaggcttgggctctggttttgg 328 |||| ||||| |||| |||||| ||||| |||||||||||||| Sbjct: 537 ggctttggctcaggcttgggttctggctttggctctggttttgg 494
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1123_B01 Length = 105736 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 tcggctctggcttgggttcaggttttggc 419 ||||||| || |||||||||||||||||| Sbjct: 27942 tcggctcaggtttgggttcaggttttggc 27914 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 267 ggttcgggttcaggcttgggctctggcttagg 298 |||| |||||||||||| ||||| |||||||| Sbjct: 15491 ggtttgggttcaggctttggctccggcttagg 15522
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0025D09 Length = 142593 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 tcggctctggcttgggttcaggttttggc 419 ||||||| || |||||||||||||||||| Sbjct: 101367 tcggctcaggtttgggttcaggttttggc 101339 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 267 ggttcgggttcaggcttgggctctggcttagg 298 |||| |||||||||||| ||||| |||||||| Sbjct: 88916 ggtttgggttcaggctttggctccggcttagg 88947
>dbj|AK026562.1| Homo sapiens cDNA: FLJ22909 fis, clone KAT05694, highly similar to HUMHMG17 Human non-histone chromosomal protein HMG-17 mRNA Length = 1164 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 167 aggcttgggctctggctttgg 147
>gb|AF221552.1|AF221552 Oryza sativa proline-rich protein RiP-15 mRNA, partial cds Length = 525 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggcttgggttcaggttttggc 419 ||||| |||||||| | || |||||| ||||||||||||||| | |||||||||| Sbjct: 244 ggctcaggcttaggtactggttttggctccggctctggcttgggcttaggttttggc 188
>dbj|AK105945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C04, full insert sequence Length = 1088 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 391 tcggctctggcttgggttcaggttttggc 419 ||||||| || |||||||||||||||||| Sbjct: 668 tcggctcaggtttgggttcaggttttggc 640
>gb|BC071707.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:87991 IMAGE:3849426), complete cds Length = 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 218 aggcttgggctctggctttgg 198
>gb|BC027290.1| Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain), mRNA (cDNA clone MGC:27734 IMAGE:2647023), complete cds Length = 1022 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 769 cggctcgggctcgggttcgggttctggctcgggctccggct 729
>gb|BC032140.2| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:29711 IMAGE:5021546), complete cds Length = 1265 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 217 aggcttgggctctggctttgg 197
>gb|AY109530.1| Zea mays CL1228_1 mRNA sequence Length = 1471 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 371 cttaggctccggctttggcatcggctctggcttgggttcaggttttggcatcggctcggg 430 ||||||||| |||||||| ||||||||||| || || ||||| || ||||||| || Sbjct: 903 cttaggctctggctttggttgtggctctggctttggatctggtttcggtttcggctcagg 844 Query: 431 tttgggctctggcttcggttc 451 || ||||||||||| ||||| Sbjct: 843 ctttggctctggcttaggttc 823
>emb|AL163052.4|CNS01RIB Human chromosome 14 DNA sequence BAC R-769B21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181905 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 34283 aggcttgggctctggctttgg 34263
>emb|AL160236.4|CNS01RH0 Human chromosome 14 DNA sequence BAC R-193F5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192401 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 46598 aggcttgggctctggctttgg 46578
>gb|BC099178.1| Rattus norvegicus high mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:116347 IMAGE:7383003), complete cds Length = 1240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 245 aggcttgggctctggctttgg 225
>gb|BC099815.1| Rattus norvegicus high mobility group nucleosomal binding domain 2, mRNA (cDNA clone MGC:124667 IMAGE:7929654), complete cds Length = 1228 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 254 aggcttgggctctggctttgg 234
>emb|Z82055.2|CET26H2 Caenorhabditis elegans Cosmid T26H2, complete sequence Length = 37569 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 336 taaggcttgggctctggctttggcatcggctcgggcttaggctccggct 384 |||||||||||||| ||||| ||| | |||| ||||||||||| |||| Sbjct: 24905 taaggcttgggctcaggcttaggcttaggctaaggcttaggctcaggct 24953
>ref|NM_001025624.1| Rattus norvegicus high mobility group nucleosomal binding domain 2 (Hmgn2), mRNA Length = 1240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 245 aggcttgggctctggctttgg 225
>gb|BC053971.1| Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain), mRNA (cDNA clone IMAGE:1397304) Length = 960 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctctggct 294 |||||| |||| |||||||||||| |||| |||||| |||| Sbjct: 714 cggctcgggctcgggttcgggttctggctcgggctccggct 674
>gb|BC003689.1| Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA (cDNA clone IMAGE:3455121) Length = 1199 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 189 aggcttgggctctggctttgg 169
>emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chromosome 4, complete sequence Length = 195272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gggatgatggaatacaaggaa 88 ||||||||||||||||||||| Sbjct: 77733 gggatgatggaatacaaggaa 77713
>gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome 14, complete sequence Length = 255753 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 76218 aggcttgggctctggctttgg 76198
>ref|NM_020810.1| Homo sapiens TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (TRMT5), mRNA Length = 5272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 4379 aggcttgggctctggctttgg 4359
>emb|AL732319.17| Mouse DNA sequence from clone RP23-180O4 on chromosome X, complete sequence Length = 151503 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 139040 aggcttgggctctggctttgg 139020
>emb|AL844586.5| Mouse DNA sequence from clone RP23-259N17 on chromosome 2, complete sequence Length = 181467 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 170594 aggcttgggctctggctttgg 170614
>emb|AL844537.5| Mouse DNA sequence from clone RP23-448A16 on chromosome 2, complete sequence Length = 185541 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 5931 aggcttgggctctggctttgg 5911
>gb|M12623.1|HUMHMG17 Human non-histone chromosomal protein HMG-17 mRNA, complete cds Length = 1187 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 211 aggcttgggctctggctttgg 191
>emb|AJ388518.1|CFA388518 Canis familiaris mRNA for non-histone chromosomal protein HMG-17 (hmg-17 gene) Length = 656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 208 aggcttgggctctggctttgg 188
>emb|X06444.1|HSHMG17P Human retropseudogene for chromosomal protein HMG-17 (clone 60H) Length = 1392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 371 aggcttgggctctggctttgg 351
>emb|X13546.1|HSHMG17G Human HMG-17 gene for non-histone chromosomal protein HMG-17 Length = 7195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 4002 aggcttgggctctggctttgg 3982
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 atcggctcgggcttaggctcc 380 ||||||||||||||||||||| Sbjct: 3074 atcggctcgggcttaggctcc 3094
>dbj|AB037814.1| Homo sapiens mRNA for KIAA1393 protein, partial cds Length = 5164 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 aggcttgggctctggctttgg 358 ||||||||||||||||||||| Sbjct: 4273 aggcttgggctctggctttgg 4253
>ref|NM_123809.3| Arabidopsis thaliana PDF1.2 AT5G44420 (PDF1.2) mRNA, complete cds Length = 438 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 acaaagtagtaataatcatcatgg 41 ||||| |||||||||||||||||| Sbjct: 29 acaaaatagtaataatcatcatgg 52
>gb|U80815.2| Caenorhabditis elegans cosmid W02C12, complete sequence Length = 22847 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 ggcttaggcatgggttgaggcttgggct 318 |||||||||||||| |||||||| |||| Sbjct: 8200 ggcttaggcatgggctgaggcttaggct 8173
>gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosome 5, complete sequence Length = 198336 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 ggctccggctttggcatcggctctggct 402 |||||||||| |||| |||||||||||| Sbjct: 56196 ggctccggctctggcttcggctctggct 56169
>ref|XM_477690.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1057 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 267 ggttcgggttcaggcttgggctctggcttagg 298 |||| |||||||||||| ||||| |||||||| Sbjct: 660 ggtttgggttcaggctttggctccggcttagg 629
>gb|AF026211.2| Caenorhabditis elegans cosmid T13B5, complete sequence Length = 31469 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 350 tggctttggcatcggctcgggcttaggc 377 |||||||||||| ||||| ||||||||| Sbjct: 12985 tggctttggcataggctcaggcttaggc 12958
>gb|AF016675.2| Caenorhabditis elegans cosmid T27B7, complete sequence Length = 23899 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 cggctcgggcttaggctccggctt 385 |||||| ||||||||||||||||| Sbjct: 3088 cggctccggcttaggctccggctt 3111
>ref|XM_360938.1| Magnaporthe grisea 70-15 hypothetical protein (MG03481.4) partial mRNA Length = 2076 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ggttcgggttcaggcttggg 286 |||||||||||||||||||| Sbjct: 1358 ggttcgggttcaggcttggg 1339
>gb|AC134611.4| Mus musculus BAC clone RP23-98D8 from chromosome 15, complete sequence Length = 198894 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cttgggttcaggttttggca 420 |||||||||||||||||||| Sbjct: 186195 cttgggttcaggttttggca 186214
>ref|NM_008169.1| Mus musculus glutamate receptor, ionotropic, NMDA1 (zeta 1) (Grin1), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gctccggctttggcatcggc 395 |||||||||||||||||||| Sbjct: 2357 gctccggctttggcatcggc 2376
>gb|BC116045.1| Bos taurus cDNA clone MGC:139435 IMAGE:8202990, complete cds Length = 1605 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 tctggctttggcatcggctcgggc 371 |||||| ||||||||||||||||| Sbjct: 55 tctggcattggcatcggctcgggc 78
>ref|NM_025725.2| Mus musculus coiled-coil domain containing 96 (Ccdc96), mRNA Length = 3584 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 ggctccggctttggcatcggctctggct 402 |||||||||| |||| |||||||||||| Sbjct: 213 ggctccggctctggcttcggctctggct 186
>ref|NM_003632.1| Homo sapiens contactin associated protein 1 (CNTNAP1), mRNA Length = 5293 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 254 cggctccggcttgggttcgggttcaggcttgggctc 289 ||||||||||| ||| ||| |||| ||||||||||| Sbjct: 180 cggctccggctagggctcgagttctggcttgggctc 145
>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence Length = 230184 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 ggctccggctttggcatcggctctggct 402 |||||||||| |||| |||||||||||| Sbjct: 63995 ggctccggctctggcttcggctctggct 64022
>emb|AL117207.1|CEY60A3A Caenorhabditis elegans YAC Y60A3A, complete sequence Length = 122592 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Plus Query: 339 ggcttgggctctggctttggcatcggctcgggcttaggctccggctttggcatcggctct 398 |||||||||| ||||| ||| | |||| ||||||||||| ||||||||| | |||| Sbjct: 98781 ggcttgggcttgggcttgggcttgggcttgggcttaggcttaggctttggcttgggcttg 98840 Query: 399 ggcttggg 406 |||||||| Sbjct: 98841 ggcttggg 98848
>ref|XM_548099.2| PREDICTED: Canis familiaris similar to keratin 17n (LOC490976), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 tcggctcgggcttaggctccggctttgg 388 ||||||| ||||| |||||||||||||| Sbjct: 239 tcggctctggcttcggctccggctttgg 266
>emb|Z93375.1|CEC38C6 Caenorhabditis elegans Cosmid C38C6, complete sequence Length = 25943 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 gggttcaggcttgggctctggcttaggc 299 |||||||||||| |||| |||||||||| Sbjct: 2139 gggttcaggcttaggctttggcttaggc 2112
>ref|XM_760578.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0144) partial mRNA Length = 3657 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aaagtagtaataatcatcat 39 |||||||||||||||||||| Sbjct: 3006 aaagtagtaataatcatcat 2987
>ref|XM_949479.1| Theileria annulata strain Ankara hypothetical protein (TA19075) partial mRNA Length = 3639 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aaagtagtaataatcatcat 39 |||||||||||||||||||| Sbjct: 2991 aaagtagtaataatcatcat 2972
>gb|BC039157.1| Mus musculus glutamate receptor, ionotropic, NMDA1 (zeta 1), mRNA (cDNA clone MGC:25375 IMAGE:4507986), complete cds Length = 3776 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gctccggctttggcatcggc 395 |||||||||||||||||||| Sbjct: 2481 gctccggctttggcatcggc 2500
>gb|AF036699.2| Caenorhabditis elegans cosmid F58F6, complete sequence Length = 43764 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 ggcttaggcatgggttgaggcttgggct 318 |||||||||||||||||| |||| |||| Sbjct: 30666 ggcttaggcatgggttgatgcttaggct 30639
>emb|AL158139.26| Human DNA sequence from clone RP1-80B9 on chromosome 6 Contains the 5' end of the GMDS gene for GDP-mannose 4,6-dehydratase, a novel gene and a CpG island, complete sequence Length = 130403 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ggcttgggctctggctttgg 358 |||||||||||||||||||| Sbjct: 112204 ggcttgggctctggctttgg 112185
>gb|AY063779.1| Arabidopsis thaliana putative antifungal protein PDF1.2 (At5g44420) mRNA, complete cds Length = 454 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 acaaagtagtaataatcatcatgg 41 ||||| |||||||||||||||||| Sbjct: 29 acaaaatagtaataatcatcatgg 52
>emb|CR352228.11| Zebrafish DNA sequence from clone CH211-104F13 in linkage group 23, complete sequence Length = 175139 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggct 402 ||||| |||| ||||||||||| ||| |||||||||||| Sbjct: 81568 ggctctggctgaggctccggctgcggcgtcggctctggct 81529 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 363 ggctcgggcttaggctccggctttggcatcggctctggct 402 ||||| |||| ||||||||||| ||| |||||||||||| Sbjct: 81424 ggctctggctgaggctccggctgcggcgtcggctctggct 81385
>gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome 15, complete sequence Length = 171878 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cttgggttcaggttttggca 420 |||||||||||||||||||| Sbjct: 49481 cttgggttcaggttttggca 49500
>dbj|AK158175.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930037O14 product:glutamate receptor, ionotropic, NMDA1 (zeta 1), full insert sequence Length = 3834 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gctccggctttggcatcggc 395 |||||||||||||||||||| Sbjct: 2566 gctccggctttggcatcggc 2585
>gb|AY961378.1| Arabidopsis halleri putative plant defensin PDF1.3 mRNA, complete cds Length = 421 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 acaaagtagtaataatcatcatgg 41 ||||||||||||||||||| |||| Sbjct: 13 acaaagtagtaataatcattatgg 36
>dbj|AK087384.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130003G02 product:glutamate receptor, ionotropic, NMDA1 (zeta 1), full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gctccggctttggcatcggc 395 |||||||||||||||||||| Sbjct: 583 gctccggctttggcatcggc 564
>dbj|AK015646.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930488J20 product:RIKEN cDNA 4921513E08 gene, full insert sequence Length = 2030 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 ggctccggctttggcatcggctctggct 402 |||||||||| |||| |||||||||||| Sbjct: 211 ggctccggctctggcttcggctctggct 184
>dbj|AK076389.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732488C07 product:unclassifiable, full insert sequence Length = 2859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gctccggctttggcatcggc 395 |||||||||||||||||||| Sbjct: 547 gctccggctttggcatcggc 528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,927,383 Number of Sequences: 3902068 Number of extensions: 3927383 Number of successful extensions: 82552 Number of sequences better than 10.0: 276 Number of HSP's better than 10.0 without gapping: 275 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 80724 Number of HSP's gapped (non-prelim): 1775 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
