>ref|NM_001030931.1| Gallus gallus signal transducer and activator of transcription 3
            (acute-phase response factor) (STAT3), mRNA
          Length = 2388

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  caggatggctcgctcccgctc 525
            |||||||||||||||||||||
Sbjct: 1812 caggatggctcgctcccgctc 1792

>ref|XM_527187.1| PREDICTED: Pan troglodytes LOC471809 (LOC471809), mRNA
          Length = 777

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 53  caacatggcaggcaccaagca 73
           |||||||||||||||||||||
Sbjct: 330 caacatggcaggcaccaagca 350

>gb|AY641397.1| Gallus gallus signal transducer and activator of transcription 3
            mRNA, complete cds
          Length = 2388

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  caggatggctcgctcccgctc 525
            |||||||||||||||||||||
Sbjct: 1812 caggatggctcgctcccgctc 1792

>emb|Z81138.1|CEW05B2 Caenorhabditis elegans Cosmid W05B2, complete sequence
          Length = 35530

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   tcttgaaaccggcaaagcact 428
             |||||||||||||||||||||
Sbjct: 13261 tcttgaaaccggcaaagcact 13281

>emb|Z35639.1|CED2045 Caenorhabditis elegans Cosmid D2045, complete sequence
          Length = 37249

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 408   tcttgaaaccggcaaagcact 428
             |||||||||||||||||||||
Sbjct: 17288 tcttgaaaccggcaaagcact 17308

>ref|NM_001031603.1| Gallus gallus similar to signal transducer and activator of
            transcription 3 isoform 2; acute-phase response factor;
            DNA-binding protein APRF (LOC431198), mRNA
          Length = 4436

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  caggatggctcgctcccgctc 525
            |||||||||||||||||||||
Sbjct: 1985 caggatggctcgctcccgctc 1965

>emb|AJ851819.1| Gallus gallus mRNA for hypothetical protein, clone 38l20
          Length = 4436

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  caggatggctcgctcccgctc 525
            |||||||||||||||||||||
Sbjct: 1985 caggatggctcgctcccgctc 1965

>ref|NM_066907.1| Caenorhabditis elegans D2045.5 (D2045.5) mRNA, complete cds
          Length = 1056

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 408 tcttgaaaccggcaaagcact 428
           |||||||||||||||||||||
Sbjct: 859 tcttgaaaccggcaaagcact 839

>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05,
              complete sequence
          Length = 153368

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    tgtgcatcgagagacttcttgaaa 415
              ||||||||||||||||| ||||||
Sbjct: 112128 tgtgcatcgagagactttttgaaa 112105

>gb|AC118232.10| Mus musculus chromosome 9, clone RP23-462C3, complete sequence
          Length = 192990

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    taaaaccacaaagtggggta 97
             ||||||||||||||||||||
Sbjct: 17316 taaaaccacaaagtggggta 17297

>gb|U00027.2|YSCH9986 Saccharomyces cerevisiae chromosome VIII cosmid 9986
          Length = 41666

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    ggcaccaagcatatataaaa 82
             ||||||||||||||||||||
Sbjct: 28910 ggcaccaagcatatataaaa 28929

>gb|AC073336.6| Homo sapiens BAC clone RP11-476H24 from 7, complete sequence
          Length = 166261

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   aaccaattcatctacagtta 170
             ||||||||||||||||||||
Sbjct: 89588 aaccaattcatctacagtta 89569

>gb|AC113081.8| Mus musculus chromosome 9, clone RP23-291B23, complete sequence
          Length = 217420

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     taaaaccacaaagtggggta 97
              ||||||||||||||||||||
Sbjct: 211879 taaaaccacaaagtggggta 211860

>emb|BX530026.5| Zebrafish DNA sequence from clone DKEY-287G12 in linkage group 12,
             complete sequence
          Length = 190980

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   cagtgcttgagctctgttct 362
             ||||||||||||||||||||
Sbjct: 64905 cagtgcttgagctctgttct 64886

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 392      tgtgcatcgagagacttcttgaaa 415
                ||||||||||||||||| ||||||
Sbjct: 18318916 tgtgcatcgagagactttttgaaa 18318893

>gb|M13623.1|YSCENOC Saccharomyces cerevisiae enolase gene, regulatory region
          Length = 601

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  ggcaccaagcatatataaaa 82
           ||||||||||||||||||||
Sbjct: 396 ggcaccaagcatatataaaa 415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,748,751
Number of Sequences: 3902068
Number of extensions: 3748751
Number of successful extensions: 70626
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70584
Number of HSP's gapped (non-prelim): 42
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)