>ASHH1_ARATH (Q84WW6) Histone-lysine N-methyltransferase ASHH1 (EC 2.1.1.43)|
           (ASH1-homolog protein 1) (Protein SET DOMAIN GROUP 26)
          Length = 492

 Score =  110 bits (275), Expect = 4e-24
 Identities = 51/77 (66%), Positives = 67/77 (87%)
 Frame = -3

Query: 550 EILFCEEVKKQATAEIDALYDEIRPAIEEHERDSQDNVSTSLAEEWIEASCCKYKAEFDL 371
           E+L  EEVKK+A   + +LYDEIRPAIEEHERDSQD+V+TS+AE+WI+ASC K KAEFDL
Sbjct: 396 EVLKYEEVKKEAAVRLSSLYDEIRPAIEEHERDSQDSVATSVAEKWIQASCNKLKAEFDL 455

Query: 370 SAAIIKNLASTPLKAKE 320
            +++IKN+ASTP+K ++
Sbjct: 456 YSSVIKNIASTPIKPQD 472

>NYX_HUMAN (Q9GZU5) Nyctalopin precursor|
          Length = 481

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 615 SAQAIECCRYLCPVSISCGTPGRYCSVRK*RS--RRLPKSMPC 493
           SA A+  C   CP + +C T  R CSVR  R+   R+P  +PC
Sbjct: 20  SAWAVGACARACPAACACSTVERGCSVRCDRAGLLRVPAELPC 62

>NYX_MOUSE (P83503) Nyctalopin precursor|
          Length = 476

 Score = 33.1 bits (74), Expect = 0.76
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 609 QAIECCRYLCPVSISCGTPGRYCSVRK*RS--RRLPKSMPC 493
           +A E C   CP + +C    R CSVR  R+  +R+P+  PC
Sbjct: 17  RATEACLRACPAACTCSHVERGCSVRCDRAGLQRVPQEFPC 57

>NDK_LEPIN (Q8EYP5) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 137

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 559 HAREILFCEEVKKQATAEIDALYDEIRPAIEEHERDSQDNVSTSLA 422
           H RE++   + K+ A   I ALY E + A   H  DS DN +  ++
Sbjct: 83  HWREVIGATDPKEAAAGTIRALYAESKEANAVHGSDSDDNAALEIS 128

>NDK_LEPIC (Q72M65) Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP|
           kinase) (Nucleoside-2-P kinase)
          Length = 137

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 559 HAREILFCEEVKKQATAEIDALYDEIRPAIEEHERDSQDNVSTSLA 422
           H RE++   + K+ A   I ALY E + A   H  DS DN +  ++
Sbjct: 83  HWREVIGATDPKEAAAGTIRALYAESKEANAVHGSDSDDNAALEIS 128

>BMS1_SCHPO (O94653) Ribosome biogenesis protein BMS1 homolog|
          Length = 1121

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
 Frame = +3

Query: 159  QRFKSTPTQYLLWSIRDSK--NRLFCEDCLRTHAF*LNHGPFCRYNTPFCSL-GFTSSFA 329
            +RF+S P    ++SI DS+  NR+        H F   +GPF   N+ FC++    +SFA
Sbjct: 789  RRFQSIP----VYSISDSRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQSVANSFA 844

Query: 330  FRG---VEAKFLIIAADRSNSALYLQQLASI 413
              G   + A   ++  D+S   +   +L  +
Sbjct: 845  KAGSFRIAATGSVLNIDQSTDIVKKLKLTGV 875

>APSB_EMENI (O60039) Anucleate primary sterigmata protein B|
          Length = 1051

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = -3

Query: 568 QLRHAREILFCEEVKKQATAEIDALYDEIRPAIEEHERDSQD 443
           Q+   R+  F +E++ +A  E+DAL DE+   IEE +R ++D
Sbjct: 386 QVAEERDAAF-QELRAEAQEELDALGDELDQKIEECQRLTED 426

>MATK_CAMSS (Q8WIV8) Maturase K (Intron maturase)|
          Length = 499

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
 Frame = -3

Query: 439 VSTSLAEEWIEASCCKYKAEFDLSAAIIKNLASTPLKAKEDVNPREQNGVLYLQNGP*FS 260
           +S      W++ +   Y   F L      N   TP K+  D + R Q   L+L N     
Sbjct: 155 ISVQTLRYWVKDASSLYLLRFFLHMYWNWNSLITPKKSSFDFSKRNQRLFLFLYNFHICE 214

Query: 259 *KA---WVRKQSSQNSRFLESLILHRRYCVG 176
            ++   ++RKQSS          L RRY  G
Sbjct: 215 YESIFVFLRKQSSHLRSISSGTFLERRYFYG 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,179,648
Number of Sequences: 219361
Number of extensions: 1825617
Number of successful extensions: 4741
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4741
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)