| Clone Name | rbasd21o20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY245454.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 1 mRNA, complete cds Length = 357 Score = 708 bits (357), Expect = 0.0 Identities = 357/357 (100%) Strand = Plus / Minus Query: 209 ttaggtggatgcagaacccatgagggccactatcttggtatggatgtcatccttcctgcc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ttaggtggatgcagaacccatgagggccactatcttggtatggatgtcatccttcctgcc 298 Query: 269 accgacaacactgtccaccttctcaccgtccttgataaacaggaaggtcggcattgcctc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 accgacaacactgtccaccttctcaccgtccttgataaacaggaaggtcggcattgcctc 238 Query: 329 aacattgtatgcttcagcgacgtccttcagctcatcaacatccaccttcaggaagatggc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 aacattgtatgcttcagcgacgtccttcagctcatcaacatccaccttcaggaagatggc 178 Query: 389 cccagggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgca 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cccagggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgca 118 Query: 449 ccaggaagcagtgaaatcaatgatcaccagcttgccggtgtccttgccattggccatgtg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 ccaggaagcagtgaaatcaatgatcaccagcttgccggtgtccttgccattggccatgtg 58 Query: 509 ggtatcgaactcttgcttggtgtggcacgcgataacggctccctcctcggcggccat 565 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggtatcgaactcttgcttggtgtggcacgcgataacggctccctcctcggcggccat 1
>gb|AY072771.1| Triticum aestivum cultivar Soissons thioredoxin H mRNA, complete cds Length = 598 Score = 607 bits (306), Expect = e-170 Identities = 389/416 (93%), Gaps = 3/416 (0%) Strand = Plus / Minus Query: 153 aactacttacaccaggtgctggctcttattgatataaccgggcaatcactcttccctt-- 210 |||||||||||||||||||||||||||||||| | || ||| |||||||||||||| Sbjct: 416 aactacttacaccaggtgctggctcttattgacacaagaggggcatcactcttcccttct 357 Query: 211 -aggtggatgcagaacccatgagggccactatcttggtatggatgtcatccttcctgcca 269 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 356 taggcagatgcagaacccatgagggccactatcttggtatggatatcatccttcctgcca 297 Query: 270 ccgacaacactgtccaccttctcaccgtccttgataaacaggaaggtcggcattgcctca 329 ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 296 ccgacaacagtgtccaccttcgcaccatccttgataaacaggaaggtcggcattgcctca 237 Query: 330 acattgtatgcttcagcgacgtccttcagctcatcaacatccaccttcaggaagatggcc 389 || ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 236 acgttgtatgcttcagcgacgtccttcagctcgtcaacgtccaccttcaggaaaatggcg 177 Query: 390 ccagggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgcac 449 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 176 ccagggaacttcttggcgtactcagcaaagactggggctatgacacgacaaggaccgcac 117 Query: 450 caggaagcagtgaaatcaatgatcaccagcttgccggtgtccttgccattggccatgtgg 509 |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 116 caggaagcagtgaagtcaatgatcaccagcttgccggtctccttgccattagccatgtgg 57 Query: 510 gtatcgaactcttgcttggtgtggcacgcgataacggctccctcctcggcggccat 565 || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 56 gtgtcgaactcttgcttggtgtggcacgctatcacggctccctcctcggcggccat 1 Score = 93.7 bits (47), Expect = 6e-16 Identities = 106/121 (87%), Gaps = 6/121 (4%) Strand = Plus / Minus Query: 43 tccaaacttcacaat--agcaactgtagcaaa-cattaggcactgtaattcagaacaacc 99 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 559 tccaaacttcacaacgaagcaactgtagcaaaacattaggtactgtaattcagaacaacc 500 Query: 100 ggtgc--atatcttaag-tctgaactctaaaatgaatcaacataaagttcagtcacaact 156 ||||| || ||| ||| ||||||||||||| |||||| || ||||||||||||| ||| Sbjct: 499 ggtgcaaatgtctgaagttctgaactctaaaccgaatcatcacaaagttcagtcacgact 440 Query: 157 a 157 | Sbjct: 439 a 439
>ref|XM_476912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 367 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 308 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 307 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 248 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaatga 471 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| | Sbjct: 247 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaatta 188 Query: 472 tcaccagcttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgt 531 | |||| ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||| Sbjct: 187 tgaccactttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgt 128 Query: 532 ggcacgcgataacggctccctcctcggcggccatt 566 |||| ||||| ||| |||||||||||||||||||| Sbjct: 127 ggcaggcgatcacgactccctcctcggcggccatt 93
>dbj|AK121423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N23, full insert sequence Length = 733 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 368 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 309 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 308 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 249 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaatga 471 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| | Sbjct: 248 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaatta 189 Query: 472 tcaccagcttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgt 531 | |||| ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||| Sbjct: 188 tgaccactttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgt 129 Query: 532 ggcacgcgataacggctccctcctcggcggccatt 566 |||| ||||| ||| |||||||||||||||||||| Sbjct: 128 ggcaggcgatcacgactccctcctcggcggccatt 94
>dbj|AK059196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A03, full insert sequence Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 367 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 308 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 307 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 248 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaatga 471 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| | Sbjct: 247 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaatta 188 Query: 472 tcaccagcttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgt 531 | |||| ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||| Sbjct: 187 tgaccactttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgt 128 Query: 532 ggcacgcgataacggctccctcctcggcggccatt 566 |||| ||||| ||| |||||||||||||||||||| Sbjct: 127 ggcaggcgatcacgactccctcctcggcggccatt 93
>dbj|D21836.1|RICTH Oryza sativa (japonica cultivar-group) mRNA for thioredoxin h, complete cds Length = 687 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 330 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 271 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 270 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 211 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaatga 471 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| | Sbjct: 210 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaatta 151 Query: 472 tcaccagcttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgt 531 | |||| ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||| Sbjct: 150 tgaccactttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgt 91 Query: 532 ggcacgcgataacggctccctcctcggcggccatt 566 |||| ||||| ||| |||||||||||||||||||| Sbjct: 90 ggcaggcgatcacgactccctcctcggcggccatt 56
>gb|U92541.1|OSU92541 Oryza sativa thioredoxin h mRNA, complete cds Length = 601 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 359 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 300 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 299 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 240 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaatga 471 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| | Sbjct: 239 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaatta 180 Query: 472 tcaccagcttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgt 531 | |||| ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||| Sbjct: 179 tgaccactttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgt 120 Query: 532 ggcacgcgataacggctccctcctcggcggccatt 566 |||| ||||| ||| |||||||||||||||||||| Sbjct: 119 ggcaggcgatcacgactccctcctcggcggccatt 85
>dbj|D21310.1|RICSS396 Oryza sativa SS396 mRNA for thioredoxin, partial sequence Length = 320 Score = 151 bits (76), Expect = 3e-33 Identities = 148/172 (86%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgtatgcttcagcgacgt 351 |||| |||||||| || |||||||||||||||||||| |||||||| |||||| || | Sbjct: 192 caccatccttgatgaataggaaggtcggcattgcctcgacattgtacttttcagcaactt 133 Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 132 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 73 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaa 463 |||| || |||||||| |||| || || || || ||||||||||||||||| Sbjct: 72 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaa 21
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 4606975 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 4607034 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaat 469 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| Sbjct: 4607035 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaat 4607092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 480 ttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcg 539 ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||||||| ||| Sbjct: 4608203 ttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgtggcaggcg 4608262 Query: 540 ataacggctccctcctcggcggccatt 566 || ||| |||||||||||||||||||| Sbjct: 4608263 atcacgactccctcctcggcggccatt 4608289 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgta 337 |||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 4606834 caccatccttgatgaataggaaggtcggcattgcctcgacattgta 4606879
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 72315 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 72374 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaat 469 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| Sbjct: 72375 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaat 72432 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 480 ttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcg 539 ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||||||| ||| Sbjct: 73543 ttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgtggcaggcg 73602 Query: 540 ataacggctccctcctcggcggccatt 566 || ||| |||||||||||||||||||| Sbjct: 73603 atcacgactccctcctcggcggccatt 73629 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgta 337 |||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 72174 caccatccttgatgaataggaaggtcggcattgcctcgacattgta 72219
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 14348 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 14407 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaat 469 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| Sbjct: 14408 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaat 14465 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 480 ttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcg 539 ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||||||| ||| Sbjct: 15576 ttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgtggcaggcg 15635 Query: 540 ataacggctccctcctcggcggccatt 566 || ||| |||||||||||||||||||| Sbjct: 15636 atcacgactccctcctcggcggccatt 15662 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgta 337 |||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 14207 caccatccttgatgaataggaaggtcggcattgcctcgacattgta 14252
>dbj|D26547.1|RICRTH Oryza sativa gene for thioredoxin h, complete cds Length = 2906 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 352 ccttcagctcatcaacatccaccttcaggaagatggccccagggaacttcttggcgtact 411 ||||||||||||||||||| ||||||||||||| || ||||||||||| |||||||| | Sbjct: 2334 ccttcagctcatcaacatcaaccttcaggaagacagcaccagggaactttttggcgtatt 2275 Query: 412 cagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaat 469 |||| || |||||||| |||| || || || || ||||||||||||||||| ||||| Sbjct: 2274 cagcgaacactggggcgatgaagcggcaagggccacaccaggaagcagtgaagtcaat 2217 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 480 ttgccggtgtccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcg 539 ||||||| |||||| | |||| ||| |||| |||||||| | |||| ||||||| ||| Sbjct: 1111 ttgccggcctccttggccttggtcatctgggcgtcgaactcgtccttgttgtggcaggcg 1052 Query: 540 ataacggctccctcctcggcggccatt 566 || ||| |||||||||||||||||||| Sbjct: 1051 atcacgactccctcctcggcggccatt 1025 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctcaacattgta 337 |||| |||||||| || |||||||||||||||||||| |||||||| Sbjct: 2475 caccatccttgatgaataggaaggtcggcattgcctcgacattgta 2430
>gb|AY104876.1| Zea mays PCO064560 mRNA sequence Length = 756 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 369 tccaccttcaggaagatggccccagggaacttcttggcgtactcagcaaagactggggct 428 |||||||||||||||| | || || |||||||||||||| || | || | |||||| Sbjct: 308 tccaccttcaggaagacgacctgagtgaacttcttggcgtgttcgacgaacagtggggcg 249 Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaatcaatgatcaccagcttgccggtg 488 ||| | || |||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 248 atggcgcggcatggaccgcaccaggcggcagtgaagtcaatgaccaccagcttgccggct 189 Query: 489 tccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcgataacggct 548 |||| | | |||| |||||||| || ||||| |||| ||||||||||||| ||| || Sbjct: 188 tcctgggccttggtcatgtgggcgtcaaactcagccttgctgtggcacgcgatcacgact 129 Query: 549 ccctcctcgg 558 |||| ||||| Sbjct: 128 ccctgctcgg 119
>gb|BT017986.1| Zea mays clone EL01N0525F08.c mRNA sequence Length = 687 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Minus Query: 369 tccaccttcaggaagatggccccagggaacttcttggcgtactcagcaaagactggggct 428 |||||||||||||| | | || || |||||||||||||| || | || | |||||| Sbjct: 252 tccaccttcaggaacacgacctgagtgaacttcttggcgtgttcgacgaacagtggggcg 193 Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaatcaatgatcaccagcttgccggtg 488 ||| | || |||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 192 atggcgcggcatggaccgcaccaggcggcagtgaagtcaatgaccaccagcttgccggct 133 Query: 489 tccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcgataacggct 548 |||| | | |||| ||||||| || ||||| |||| ||||||||||||| ||| || Sbjct: 132 tcctgggccttggtaatgtgggcgtcaaactcagccttgctgtggcacgcgatcacgact 73 Query: 549 ccctcctcgg 558 |||| ||||| Sbjct: 72 ccctgctcgg 63
>emb|AJ890021.1| Zea mays mRNA for thioredoxin h2 protein (trxh2 gene), cultivar A69Y, from endosperm tissue Length = 556 Score = 75.8 bits (38), Expect = 1e-10 Identities = 152/190 (80%) Strand = Plus / Minus Query: 369 tccaccttcaggaagatggccccagggaacttcttggcgtactcagcaaagactggggct 428 |||||||||||||| | | || || |||||||||||||| || | || | |||||| Sbjct: 197 tccaccttcaggaacacgacctgagtgaacttcttggcgtgttcgacgaacagtggggcg 138 Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaatcaatgatcaccagcttgccggtg 488 ||| | || |||||||||||||||| |||||||| || |||| |||||||||||||| Sbjct: 137 atggcgcggcatggaccgcaccaggcggcagtgaagtcgatgaccaccagcttgccggct 78 Query: 489 tccttgccattggccatgtgggtatcgaactcttgcttggtgtggcacgcgataacggct 548 |||| | | |||| |||||||| || ||||| |||| ||||||||||||| ||| || Sbjct: 77 tcctgggccttggtcatgtgggcgtcaaactcagccttgctgtggcacgcgatcacgact 18 Query: 549 ccctcctcgg 558 |||| ||||| Sbjct: 17 ccctgctcgg 8
>dbj|D87984.1| Fagopyrum esculentum mRNA for thioredoxin, complete cds Length = 595 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 316 tcggcattgcctcaacattgtatgcttcagcgacgtccttcagctcatcaacatccac 373 ||||||||||||| || |||||| | |||||||| ||||||| |||||||||||||| Sbjct: 332 tcggcattgcctccaccttgtattcctcagcgacatccttcaaatcatcaacatccac 275
>gb|AY344230.1| Ipomoea batatas thioredoxin H3 mRNA, complete cds Length = 676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 441 ggaccgcaccaggaagcagtgaaatcaa 468 |||||||||||||||||||||||||||| Sbjct: 246 ggaccgcaccaggaagcagtgaaatcaa 219
>gb|AY170650.1| Pisum sativum clone 3 thioredoxin h mRNA, complete cds Length = 665 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 438 catggaccgcaccaggaagcagtgaaatcaa 468 |||||||||||||| |||||||||||||||| Sbjct: 198 catggaccgcaccaagaagcagtgaaatcaa 168
>gb|AY335159.1| Fagopyrum tataricum thioredoxin mRNA, partial cds Length = 328 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 312 aaggtcggcattgcctcaacattgtatgcttcagcgacgtccttcagctcatcaacatcc 371 ||||||||||||||||| || |||||| | |||||||| || || |||||||||||| Sbjct: 110 aaggtcggcattgcctccactttgtattcctcagcgacatcattacaatcatcaacatcc 51 Query: 372 acctt 376 ||||| Sbjct: 50 acctt 46
>gb|AF420472.2| Triticum aestivum thioredoxin H mRNA, complete cds Length = 547 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 393 gggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgcaccag 452 ||||||||||||||| |||||||| | ||| || |||| || ||||| |||||||| Sbjct: 238 gggaacttcttggcgagatcagcaaaaattggagccatgatgcggcatggtccgcaccat 179 Query: 453 gaagcagtgaaatcaatgatcaccagctt 481 || |||||||| ||||| | ||||||||| Sbjct: 178 gatgcagtgaagtcaatcaccaccagctt 150
>gb|AY245455.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 2 mRNA, complete cds Length = 369 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 393 gggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgcaccag 452 ||||||||||||||| ||||| || ||||| || |||| || ||||| |||||||| Sbjct: 191 gggaacttcttggcgagatcagcgaaaactggagccatgatgcggcatggtccgcaccat 132 Query: 453 gaagcagtgaaatcaatgatcaccagctt 481 || |||||||| ||||| | ||||||||| Sbjct: 131 gatgcagtgaagtcaatcaccaccagctt 103
>emb|AJ001903.1|TDAJ1903 Triticum durum mRNA for thioredoxin H Length = 630 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Minus Query: 393 gggaacttcttggcgtactcagcaaagactggggctatgacacgacatggaccgcaccag 452 ||||||||||||||| |||||||| | ||| || |||| || ||||| |||||||| Sbjct: 268 gggaacttcttggcgagatcagcaaaaattggagccatgatgcggcatggtccgcaccat 209 Query: 453 gaagcagtgaaatcaatgatcaccagctt 481 || |||||||| ||||| | ||||||||| Sbjct: 208 gatgcagtgaagtcaatcaccaccagctt 180
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaat 465 |||||||||||||| || |||||||||||| |||||| Sbjct: 17877500 atgacacgacatggtccacaccaggaagcactgaaat 17877464 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 17535277 gctccctcctcggcggccat 17535258 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 15556958 gctccctcctcggcggccat 15556977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 2371274 gctccctcctcggcggccat 2371293
>dbj|AK101462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F19, full insert sequence Length = 851 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaat 465 |||||||||||||| || |||||||||||| |||||| Sbjct: 720 atgacacgacatggtccacaccaggaagcactgaaat 684
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaat 465 |||||||||||||| || |||||||||||| |||||| Sbjct: 74255 atgacacgacatggtccacaccaggaagcactgaaat 74219
>emb|AJ844021.1| Plantago major mRNA for thioredoxin 1 (trx1 gene) Length = 600 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Minus Query: 410 ctcagcaaagactggggctatgacacgacatggaccgcaccaggaagcagtgaaatcaat 469 |||||| |||| |||||| |||| || ||||| || ||||| ||||||||||| ||||| Sbjct: 231 ctcagccaagattggggcgatgaagcggcatggtccacaccacgaagcagtgaagtcaat 172 Query: 470 gatcaccagctt 481 | ||||||||| Sbjct: 171 aaccaccagctt 160
>emb|Z70677.1|RCTHIORXN R.communis mRNA for thioredoxin Length = 603 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 353 cttcagctcatcaacatccaccttcaggaag 383 |||||| ||||| |||||||||||||||||| Sbjct: 235 cttcagttcatccacatccaccttcaggaag 205
>ref|XM_476046.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 399 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 182 acacgacatggtccacaccaggaagcactgaaat 149
>emb|AL035079.14|HS53C18 Human DNA sequence from clone RP1-53C18 on chromosome 11p12-13 Contains the CAT gene for Catalase, the first coding exon of the ortholog of rat Ankyrin repeat protein CCA3, a Recepin partial pseudogene, and a pseudogene similar to part of DNAJ proteins (HIRIP4, DNJ3, CPR3). Contains two CpG islands, complete sequence Length = 136284 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 498 ttggccatgtgggtatcgaactcttg 523 |||||||||||||| ||||||||||| Sbjct: 53351 ttggccatgtgggtctcgaactcttg 53326
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 52878 acacgacatggtccacaccaggaagcactgaaat 52911
>gb|DQ083183.1| Oryza sativa (indica cultivar-group) clone 4S1C03 mRNA sequence Length = 325 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 292 caccgtccttgataaacaggaaggtcggcattgcctca 329 |||| |||||||| || |||||||||||||||| |||| Sbjct: 38 caccatccttgatgaataggaaggtcggcattgtctca 1
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 4078184 acacgacatggtccacaccaggaagcactgaaat 4078217 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 24965672 tccttcataaacaggaatgttggcatagcctcaaca 24965637
>dbj|AK067480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B08, full insert sequence Length = 3066 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 1942 acacgacatggtccacaccaggaagcactgaaat 1909
>dbj|AK060918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G10, full insert sequence Length = 1012 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 490 acacgacatggtccacaccaggaagcactgaaat 457
>gb|DQ306739.1| Hevea brasiliensis isolate SSH10 mRNA sequence Length = 327 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 tcatcaacatccaccttcaggaagat 385 ||||| |||||||||||||||||||| Sbjct: 248 tcatccacatccaccttcaggaagat 273
>gb|AF435817.1| Oryza sativa thioredoxin h-like protein mRNA, complete cds Length = 399 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 432 acacgacatggaccgcaccaggaagcagtgaaat 465 ||||||||||| || |||||||||||| |||||| Sbjct: 182 acacgacatggtccacaccaggaagcactgaaat 149
>ref|NM_101829.2| Arabidopsis thaliana ATTRX4; thiol-disulfide exchange intermediate AT1G19730 (ATTRX4) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 260 tcatcaacatccaccttgaagaagatggc 232
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 gatcaccagcttgccggtgtccttg 494 |||||||||| |||||||||||||| Sbjct: 1229179 gatcaccagcgtgccggtgtccttg 1229155
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 39036 tcatcaacatccaccttgaagaagatggc 39008
>ref|XM_541527.2| PREDICTED: Canis familiaris hypothetical LOC484412 (LOC484412), mRNA Length = 2580 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 aggaagatggccccagggaac 398 ||||||||||||||||||||| Sbjct: 2213 aggaagatggccccagggaac 2233
>gb|AF159388.1| Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-1 allele, complete cds Length = 978 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaat 465 |||||||| ||||| || |||||||||||| |||||| Sbjct: 764 atgacacggcatggcccacaccaggaagcactgaaat 728
>ref|XM_503146.1| Yarrowia lipolytica CLIB122, YALI0D22308g predicted mRNA Length = 333 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 ccaccgacaacactgtccaccttct 291 ||||||| ||||||||||||||||| Sbjct: 170 ccaccgagaacactgtccaccttct 146
>emb|Z35473.1|ATTHIRED1 A.thaliana (GREN) mRNA for thioredoxin Length = 642 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 249 tcatcaacatccaccttgaagaagatggc 221
>emb|AJ319808.1|PSA319808 Pisum sativum mRNA for thioredoxin h (trxh gene) Length = 593 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 438 catggaccgcaccaggaagcagtgaaatc 466 |||||||||||||| |||||||| ||||| Sbjct: 184 catggaccgcaccacgaagcagtaaaatc 156
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccatt 566 ||||||||||||||||||||| Sbjct: 7522837 gctccctcctcggcggccatt 7522817
>emb|BX818339.1|CNS0ACPU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 254 tcatcaacatccaccttgaagaagatggc 226
>emb|BX841902.1|CNS09Y73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 243 tcatcaacatccaccttgaagaagatggc 215
>gb|BT004710.1| Arabidopsis thaliana At1g19730 gene, complete cds Length = 360 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 209 tcatcaacatccaccttgaagaagatggc 181
>gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BAC F6F9 genomic sequence, complete sequence Length = 119942 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 99302 tcatcaacatccaccttgaagaagatggc 99274
>gb|AY088698.1| Arabidopsis thaliana clone 9219 mRNA, complete sequence Length = 590 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 260 tcatcaacatccaccttgaagaagatggc 232
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccatt 566 ||||||||||||||||||||| Sbjct: 31252 gctccctcctcggcggccatt 31232
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccatt 566 ||||||||||||||||||||| Sbjct: 126641 gctccctcctcggcggccatt 126621
>dbj|AK118542.1| Arabidopsis thaliana At1g19730 mRNA for putative thioredoxin, complete cds, clone: RAFL19-77-A10 Length = 556 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 231 tcatcaacatccaccttgaagaagatggc 203
>gb|AF159389.1|AF159389 Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-2 allele, complete cds Length = 975 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 429 atgacacgacatggaccgcaccaggaagcagtgaaat 465 |||||||| ||||| || |||||||||||| |||||| Sbjct: 761 atgacacggcatggcccacaccaggaagcactgaaat 725
>gb|U35828.1|ATU35828 Arabidopsis thaliana thioredoxin h (TRX4) gene, partial cds Length = 829 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 360 tcatcaacatccaccttcaggaagatggc 388 ||||||||||||||||| | ||||||||| Sbjct: 607 tcatcaacatccaccttgaagaagatggc 579
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 ccttcagctcatcaacatcca 372 ||||||||||||||||||||| Sbjct: 6342186 ccttcagctcatcaacatcca 6342206
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 ccaccgacaacactgtccaccttct 291 ||||||| ||||||||||||||||| Sbjct: 2837406 ccaccgagaacactgtccaccttct 2837430
>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 99067 ggtggatgcagaacccatga 99048
>ref|XM_475666.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 287 tccttcataaacaggaatgttggcatagcctcaaca 252
>ref|XM_471225.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 20 gctccctcctcggcggccat 1
>ref|NM_195508.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0082N11.6), mRNA Length = 900 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 20 gctccctcctcggcggccat 1
>ref|NM_195753.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBb0008A05.22), mRNA Length = 3798 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 20 gctccctcctcggcggccat 1
>ref|NM_195681.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0004A10.2), mRNA Length = 4104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 20 gctccctcctcggcggccat 1
>ref|NM_195341.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0034E15.13), mRNA Length = 768 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 353 gctccctcctcggcggccat 334
>ref|XM_472106.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 20 gctccctcctcggcggccat 1
>ref|XM_471895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1917 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 192 gctccctcctcggcggccat 173
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 25783 gctccctcctcggcggccat 25764
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 5802 gctccctcctcggcggccat 5821
>ref|XM_586062.2| PREDICTED: Bos taurus similar to discs large homolog 7 (LOC509161), partial mRNA Length = 3198 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ccttaggtggatgcagaacc 226 |||||||||||||||||||| Sbjct: 2839 ccttaggtggatgcagaacc 2858
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 34525 tccttcataaacaggaatgttggcatagcctcaaca 34490
>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA Length = 4025 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 acatccaccttcaggaagatggcc 389 |||||||| ||||||||||||||| Sbjct: 3229 acatccactttcaggaagatggcc 3206
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 154471 ggtggatgcagaacccatga 154490
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 19088310 gctccctcctcggcggccat 19088329
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence Length = 178925 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 131606 ggtggatgcagaacccatga 131625
>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence Length = 172810 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 47765 ggtggatgcagaacccatga 47746
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 69267 gctccctcctcggcggccat 69248
>gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, complete sequence Length = 185637 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 120315 ggtggatgcagaacccatga 120296
>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence Length = 158759 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 156142 ggtggatgcagaacccatga 156123
>emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chromosome 9 Contains an aquaporin 7(AQP7) pseudogene, a novel gene, three novel pseudogenes, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast)(BMS1L) and a CpG island, complete sequence Length = 158462 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 155874 ggtggatgcagaacccatga 155855
>emb|AL442223.13| Human DNA sequence from clone RP11-426P2 on chromosome 1 Contains the 5' end of a variant of the DAB1 gene for disabled homolog 1 (Drosophila) and a CpG island, complete sequence Length = 54683 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cttcacaatagcaactgtagcaaa 72 |||||||||||||| ||||||||| Sbjct: 27256 cttcacaatagcaagtgtagcaaa 27279
>emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chromosome 10 Contains a RING finger protein 18 (RNF18) pseudogene, an actin-related protein 3 homolog (yeast) (ACTR3) pseudogene, a poly(A) cytoplasmic binding protein 3 (PABPC3) pseudogene, a gene for a novel protein similar to ATP-binding cassette sub-family D (ALD) member 1 (ABCD1), two novel genes and two CpG islands, complete sequence Length = 206192 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 24409 ggtggatgcagaacccatga 24428
>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21, complete sequence Length = 129478 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcaccaggaagcagtgaaat 465 |||||||||||||||||||| Sbjct: 68837 gcaccaggaagcagtgaaat 68856
>emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1159F04, complete sequence Length = 158330 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 17015 gctccctcctcggcggccat 17034
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 69956 gctccctcctcggcggccat 69937
>emb|BX569684.2|OSJN00290 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046K02, complete sequence Length = 109366 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 98511 gctccctcctcggcggccat 98530
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 96593 gctccctcctcggcggccat 96612
>gb|AC132872.17| Homo sapiens chromosome 17, clone RP13-516M14, complete sequence Length = 171569 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gatgtcatccttcctgccaccgac 274 |||| ||||||||||||||||||| Sbjct: 48447 gatgacatccttcctgccaccgac 48470
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 56136 gctccctcctcggcggccat 56155
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ccagcttgccggtgtccttg 494 |||||||||||||||||||| Sbjct: 1956444 ccagcttgccggtgtccttg 1956425
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 tgatcaccagcttgccggtg 488 |||||||||||||||||||| Sbjct: 1631567 tgatcaccagcttgccggtg 1631548
>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete sequence Length = 184355 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 153548 ggtggatgcagaacccatga 153529
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 acatccaccttcaggaagatggcc 389 |||||||| ||||||||||||||| Sbjct: 67570 acatccactttcaggaagatggcc 67547
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 104423 ggtggatgcagaacccatga 104404
>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 attggccatgtgggtatcgaactc 520 ||||||||||||||| |||||||| Sbjct: 99717 attggccatgtgggtctcgaactc 99694
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 13964 gctccctcctcggcggccat 13945
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 11846 gctccctcctcggcggccat 11865
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 16764 gctccctcctcggcggccat 16745
>ref|NM_079214.2| Drosophila melanogaster Thioredoxin-like CG5495-RA (Txl), mRNA Length = 1151 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 acatccaccttcaggaagatggcc 389 |||||||| ||||||||||||||| Sbjct: 342 acatccactttcaggaagatggcc 319
>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence Length = 188872 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 82096 ggtggatgcagaacccatga 82115
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 106601 gctccctcctcggcggccat 106620
>ref|XM_625516.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_550), partial mRNA Length = 7059 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aataattatccaaacttcac 54 |||||||||||||||||||| Sbjct: 981 aataattatccaaacttcac 1000
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0065C16, from Chromosome 10, complete sequence Length = 146391 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 101390 gctccctcctcggcggccat 101409
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 11151827 gctccctcctcggcggccat 11151846
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 12906886 gctccctcctcggcggccat 12906905 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 8851529 gctccctcctcggcggccat 8851548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 8419400 gctccctcctcggcggccat 8419381 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 7382900 gctccctcctcggcggccat 7382881 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 6272398 gctccctcctcggcggccat 6272379
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 6889124 gctccctcctcggcggccat 6889105 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 6576841 gctccctcctcggcggccat 6576860
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 19082351 gctccctcctcggcggccat 19082370
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 15226521 gctccctcctcggcggccat 15226540
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 37432774 gctccctcctcggcggccat 37432793
>gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complete sequence Length = 157666 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 72290 ggtggatgcagaacccatga 72271
>gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, complete sequence Length = 158087 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 92883 ggtggatgcagaacccatga 92864
>gb|AC012640.12| Homo sapiens chromosome 5 clone CTD-2256P15, complete sequence Length = 145122 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gtggatgcagaacccatgag 232 |||||||||||||||||||| Sbjct: 39313 gtggatgcagaacccatgag 39294
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 27311 gctccctcctcggcggccat 27330
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 144808 gctccctcctcggcggccat 144827
>gb|AF143404.1|AF143404 Drosophila melanogaster thioredoxin-like protein TXL (txl) mRNA, complete cds Length = 1087 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 acatccaccttcaggaagatggcc 389 |||||||| ||||||||||||||| Sbjct: 300 acatccactttcaggaagatggcc 277
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 110296 gctccctcctcggcggccat 110315
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 139843 gctccctcctcggcggccat 139824
>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063K04 Length = 158792 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 37642 gctccctcctcggcggccat 37661
>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete sequence Length = 172149 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ggtggatgcagaacccatga 231 |||||||||||||||||||| Sbjct: 29112 ggtggatgcagaacccatga 29131
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 7172 gctccctcctcggcggccat 7153
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 10188 gctccctcctcggcggccat 10207
>emb|X78822.1|CRTRXH C.reinhardtii mRNA for thioredoxin-h Length = 1285 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 tcaacatccaccttcaggaagatg 386 |||||||| ||||||||||||||| Sbjct: 659 tcaacatcgaccttcaggaagatg 636 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 tcaacatccaccttcaggaagatg 386 |||||||| ||||||||||||||| Sbjct: 322 tcaacatcgaccttcaggaagatg 345
>emb|X80887.1|CRTRXH1 C.reinhardtii Trx h gene Length = 1450 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 tcaacatccaccttcaggaagatg 386 |||||||| ||||||||||||||| Sbjct: 574 tcaacatcgaccttcaggaagatg 551
>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full insert sequence Length = 3740 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 432 tccttcataaacaggaatgttggcatagcctcaaca 397
>dbj|AK059385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G10, full insert sequence Length = 682 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 401 tccttcataaacaggaatgttggcatagcctcaaca 366
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 119802 gctccctcctcggcggccat 119821
>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete sequence Length = 284268 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 acatccaccttcaggaagatggcc 389 |||||||| ||||||||||||||| Sbjct: 236807 acatccactttcaggaagatggcc 236784
>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228194 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tagacagaataattatccaaactt 51 ||||||||| |||||||||||||| Sbjct: 68010 tagacagaaaaattatccaaactt 68033
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 12914226 gctccctcctcggcggccat 12914245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 8856668 gctccctcctcggcggccat 8856687 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 8424499 gctccctcctcggcggccat 8424480 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 7387099 gctccctcctcggcggccat 7387080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 6273984 gctccctcctcggcggccat 6273965
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 11231016 gctccctcctcggcggccat 11231035
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gctccctcctcggcggccat 565 |||||||||||||||||||| Sbjct: 16017 gctccctcctcggcggccat 15998
>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190, complete sequence Length = 125299 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcacaatagcaactgtagca 70 |||||||||||||||||||| Sbjct: 92184 tcacaatagcaactgtagca 92165
>dbj|AB053294.1| Oryza sativa (japonica cultivar-group) RTRXH2 mRNA for thioredoxin h, complete cds Length = 740 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 297 tccttgataaacaggaaggtcggcattgcctcaaca 332 ||||| ||||||||||| || ||||| ||||||||| Sbjct: 402 tccttcataaacaggaatgttggcatagcctcaaca 367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,987,730 Number of Sequences: 3902068 Number of extensions: 4987730 Number of successful extensions: 91981 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 91155 Number of HSP's gapped (non-prelim): 817 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)